Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33174.t1 | XP_013465813.1 | 98.9 | 274 | 3 | 0 | 11 | 284 | 80 | 353 | 9.60E-162 | 579.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33174.t1 | Q8W4E6 | 86.5 | 275 | 36 | 1 | 11 | 284 | 85 | 359 | 1.6e-144 | 513.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33174.t1 | A0A072VCX6 | 98.9 | 274 | 3 | 0 | 11 | 284 | 80 | 353 | 6.9e-162 | 579.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050323 | MS.gene33174 | -0.807531 | 4.83E-50 | -1.69E-46 |
| MS.gene050381 | MS.gene33174 | 0.800702 | 1.27E-48 | -1.69E-46 |
| MS.gene050504 | MS.gene33174 | -0.800208 | 1.61E-48 | -1.69E-46 |
| MS.gene050868 | MS.gene33174 | -0.823002 | 1.75E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene33174 | -0.826831 | 2.19E-54 | -1.69E-46 |
| MS.gene051560 | MS.gene33174 | -0.80425 | 2.36E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene33174 | -0.801119 | 1.05E-48 | -1.69E-46 |
| MS.gene052494 | MS.gene33174 | 0.813165 | 2.94E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene33174 | -0.807202 | 5.67E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene33174 | -0.805323 | 1.41E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene33174 | -0.800649 | 1.31E-48 | -1.69E-46 |
| MS.gene056040 | MS.gene33174 | -0.81067 | 1.03E-50 | -1.69E-46 |
| MS.gene056310 | MS.gene33174 | 0.800315 | 1.53E-48 | -1.69E-46 |
| MS.gene056313 | MS.gene33174 | 0.815537 | 8.79E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene33174 | -0.806037 | 9.99E-50 | -1.69E-46 |
| MS.gene057086 | MS.gene33174 | -0.807766 | 4.31E-50 | -1.69E-46 |
| MS.gene057291 | MS.gene33174 | 0.809938 | 1.48E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene33174 | -0.800272 | 1.56E-48 | -1.69E-46 |
| MS.gene058171 | MS.gene33174 | 0.854656 | 1.06E-61 | -1.69E-46 |
| MS.gene058173 | MS.gene33174 | 0.847464 | 1.14E-59 | -1.69E-46 |
| MS.gene058175 | MS.gene33174 | 0.85326 | 2.69E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene33174 | -0.804524 | 2.07E-49 | -1.69E-46 |
| MS.gene058420 | MS.gene33174 | -0.808357 | 3.22E-50 | -1.69E-46 |
| MS.gene059045 | MS.gene33174 | 0.842339 | 2.75E-58 | -1.69E-46 |
| MS.gene06000 | MS.gene33174 | -0.807082 | 6.01E-50 | -1.69E-46 |
| MS.gene060187 | MS.gene33174 | 0.813401 | 2.61E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene33174 | -0.827132 | 1.85E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33174.t1 | MTR_1g012920 | 98.905 | 274 | 3 | 0 | 11 | 284 | 80 | 353 | 0.0 | 567 |
| MS.gene33174.t1 | MTR_5g089520 | 71.273 | 275 | 76 | 2 | 11 | 284 | 68 | 340 | 8.80e-149 | 421 |
| MS.gene33174.t1 | MTR_8g039290 | 72.727 | 275 | 72 | 2 | 11 | 284 | 80 | 352 | 6.99e-144 | 409 |
| MS.gene33174.t1 | MTR_8g039290 | 72.364 | 275 | 72 | 3 | 11 | 284 | 80 | 351 | 2.35e-141 | 402 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33174.t1 | AT5G25265 | 86.545 | 275 | 36 | 1 | 11 | 284 | 85 | 359 | 3.45e-179 | 498 |
| MS.gene33174.t1 | AT2G25260 | 77.818 | 275 | 58 | 2 | 11 | 284 | 79 | 351 | 2.00e-161 | 453 |
| MS.gene33174.t1 | AT5G13500 | 73.818 | 275 | 69 | 2 | 11 | 284 | 78 | 350 | 3.23e-153 | 432 |
| MS.gene33174.t1 | AT5G13500 | 73.818 | 275 | 69 | 2 | 11 | 284 | 78 | 350 | 3.23e-153 | 432 |
| MS.gene33174.t1 | AT5G13500 | 73.818 | 275 | 69 | 2 | 11 | 284 | 78 | 350 | 3.23e-153 | 432 |
| MS.gene33174.t1 | AT3G01720 | 24.000 | 300 | 171 | 13 | 4 | 272 | 394 | 667 | 1.13e-12 | 68.6 |
Find 77 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAAGCTTTATCGGTTTC+AGG | 0.147915 | 1.1:+8261960 | None:intergenic |
| TTCATAATTCACTACACTTA+TGG | 0.167165 | 1.1:-8260472 | MS.gene33174:CDS |
| ATGAAACATACCACACTTTC+TGG | 0.188552 | 1.1:+8260230 | None:intergenic |
| GTTGCTCAACCTTTGCCTTC+TGG | 0.227974 | 1.1:-8263631 | MS.gene33174:CDS |
| GCCGTTTCGTCTGCTCTTCA+TGG | 0.235074 | 1.1:-8261825 | MS.gene33174:CDS |
| CTAGGCGACTCTAGTGAAAA+TGG | 0.261014 | 1.1:-8259287 | MS.gene33174:intron |
| CCTGAAACCGATAAAGCTTT+TGG | 0.263522 | 1.1:-8261960 | MS.gene33174:CDS |
| CACCCATCCAAAAGCTTTAT+CGG | 0.266241 | 1.1:+8261953 | None:intergenic |
| ATTGGATCTATATTGGTTAC+AGG | 0.301550 | 1.1:+8262304 | None:intergenic |
| ACACAAGGACTTCATGATTC+AGG | 0.308069 | 1.1:-8261787 | MS.gene33174:intron |
| ATTCCCAATTGGATCTATAT+TGG | 0.312594 | 1.1:+8262297 | None:intergenic |
| TGTTGGAGCAATCTTCTTAA+GGG | 0.314451 | 1.1:+8262016 | None:intergenic |
| AGTGTAGAGTTATGTATTAT+TGG | 0.315997 | 1.1:-8263762 | MS.gene33174:CDS |
| AGCACTTTCTCATATTTCTT+AGG | 0.325931 | 1.1:+8262355 | None:intergenic |
| TGGTAAAACTGATCAGTATA+TGG | 0.343547 | 1.1:-8263671 | MS.gene33174:CDS |
| TCATAATTCACTACACTTAT+GGG | 0.346462 | 1.1:-8260471 | MS.gene33174:CDS |
| ATAATAGATCGGTACCTTCA+TGG | 0.360692 | 1.1:+8260438 | None:intergenic |
| ATGTTGGAGCAATCTTCTTA+AGG | 0.368822 | 1.1:+8262015 | None:intergenic |
| GATACCTTGCCAACAATTAC+AGG | 0.376521 | 1.1:+8262271 | None:intergenic |
| CATTCCATCTCTGGCTAAGT+TGG | 0.377427 | 1.1:+8262408 | None:intergenic |
| CTGGTATGGGTGGATTTACT+AGG | 0.390112 | 1.1:-8263705 | MS.gene33174:CDS |
| GAAAGTGGTGATGACAATTC+TGG | 0.391728 | 1.1:-8263724 | MS.gene33174:CDS |
| TTTGCCTTCTGGAATGGATC+AGG | 0.414709 | 1.1:-8263620 | MS.gene33174:intron |
| GGGAATTCACCTGTAATTGT+TGG | 0.416734 | 1.1:-8262280 | MS.gene33174:CDS |
| TGCAGCTCCCATTCCATCTC+TGG | 0.432516 | 1.1:+8262399 | None:intergenic |
| TCAACCTTTGCCTTCTGGAA+TGG | 0.434673 | 1.1:-8263626 | MS.gene33174:CDS |
| TCTCTGGCTAAGTTGGGTAT+AGG | 0.438539 | 1.1:+8262415 | None:intergenic |
| GTAACCAATATAGATCCAAT+TGG | 0.439770 | 1.1:-8262301 | MS.gene33174:CDS |
| GTTACAGGTCCATTCTCCTC+GGG | 0.450284 | 1.1:+8262319 | None:intergenic |
| TCGTCTGCTCTTCATGGTGT+TGG | 0.457117 | 1.1:-8261819 | MS.gene33174:CDS |
| ATTCCATCTCTGGCTAAGTT+GGG | 0.459075 | 1.1:+8262409 | None:intergenic |
| ATTACAGGTGAATTCCCAAT+TGG | 0.460766 | 1.1:+8262286 | None:intergenic |
| AACATGGATGAATGTTTCCT+TGG | 0.468333 | 1.1:-8261997 | MS.gene33174:CDS |
| TTAGGCTCGATATAAAAGAA+AGG | 0.471498 | 1.1:+8262373 | None:intergenic |
| CCACCATGGGACAAAGAACT+TGG | 0.473823 | 1.1:-8260502 | MS.gene33174:CDS |
| AATCAGGGTGAACTGACATA+TGG | 0.476030 | 1.1:-8260335 | MS.gene33174:intron |
| AAAGGTTGAGCAACAAAAGT+AGG | 0.477238 | 1.1:+8263640 | None:intergenic |
| TGTTTCCTTGGCAATGAAGA+AGG | 0.478316 | 1.1:-8261985 | MS.gene33174:CDS |
| TTGCCAAGTTCTTTGTCCCA+TGG | 0.483106 | 1.1:+8260499 | None:intergenic |
| GGTTTCACAATGATATGATC+TGG | 0.489542 | 1.1:+8262436 | None:intergenic |
| AAGTACTACCCCGAGGAGAA+TGG | 0.491483 | 1.1:-8262328 | MS.gene33174:CDS |
| CAACTTAGCCAGAGATGGAA+TGG | 0.497539 | 1.1:-8262407 | MS.gene33174:CDS |
| TAACCAATATAGATCCAATT+GGG | 0.497652 | 1.1:-8262300 | MS.gene33174:CDS |
| GGTTACAGGTCCATTCTCCT+CGG | 0.510880 | 1.1:+8262318 | None:intergenic |
| TGGTGATGACAATTCTGGTA+TGG | 0.520121 | 1.1:-8263719 | MS.gene33174:CDS |
| AACTTAGCCAGAGATGGAAT+GGG | 0.520799 | 1.1:-8262406 | MS.gene33174:CDS |
| TTCACCTGTAATTGTTGGCA+AGG | 0.523630 | 1.1:-8262275 | MS.gene33174:intron |
| TAGGCTCGATATAAAAGAAA+GGG | 0.524947 | 1.1:+8262374 | None:intergenic |
| CATTGTTCTTAATAGACCAT+GGG | 0.529987 | 1.1:-8262605 | MS.gene33174:CDS |
| ACCATGAAGAGCAGACGAAA+CGG | 0.535360 | 1.1:+8261824 | None:intergenic |
| AGGATCCTTCTTCATTGCCA+AGG | 0.541651 | 1.1:+8261980 | None:intergenic |
| TTTAAGAAGATGAAGGAAAG+TGG | 0.546825 | 1.1:-8263739 | MS.gene33174:CDS |
| ATTATGTATGTCAGCCACCA+TGG | 0.547374 | 1.1:-8260516 | MS.gene33174:intron |
| ACATTGTTCTTAATAGACCA+TGG | 0.549000 | 1.1:-8262606 | MS.gene33174:CDS |
| CCAAGTTCTTTGTCCCATGG+TGG | 0.557973 | 1.1:+8260502 | None:intergenic |
| AATCTGACATTGCCACCACC+TGG | 0.559929 | 1.1:-8260257 | MS.gene33174:CDS |
| AAGGAAACATTCATCCATGT+TGG | 0.564015 | 1.1:+8261999 | None:intergenic |
| AAGGTTGAGCAACAAAAGTA+GGG | 0.572523 | 1.1:+8263641 | None:intergenic |
| TTATTGGTTTAAGAAGATGA+AGG | 0.575689 | 1.1:-8263746 | MS.gene33174:CDS |
| ATACCCAACTTAGCCAGAGA+TGG | 0.578267 | 1.1:-8262412 | MS.gene33174:CDS |
| TTATGTATGTCAGCCACCAT+GGG | 0.581129 | 1.1:-8260515 | MS.gene33174:intron |
| ACCACACTTTCTGGAACACC+AGG | 0.589263 | 1.1:+8260239 | None:intergenic |
| TTAAGAAGATTGCTCCAACA+TGG | 0.603507 | 1.1:-8262013 | MS.gene33174:CDS |
| CTTTCTGGAACACCAGGTGG+TGG | 0.609144 | 1.1:+8260245 | None:intergenic |
| GGTGATGACAATTCTGGTAT+GGG | 0.617478 | 1.1:-8263718 | MS.gene33174:CDS |
| GACCATGGGCATTTGTACAG+TGG | 0.619885 | 1.1:-8262591 | MS.gene33174:CDS |
| ACCTGGTGTTCCAGAAAGTG+TGG | 0.626276 | 1.1:-8260240 | MS.gene33174:intron |
| TGATCCATTCCAGAAGGCAA+AGG | 0.638296 | 1.1:+8263622 | None:intergenic |
| AGCCACTGTACAAATGCCCA+TGG | 0.640117 | 1.1:+8262589 | None:intergenic |
| GATGACAATTCTGGTATGGG+TGG | 0.644898 | 1.1:-8263715 | MS.gene33174:CDS |
| TGGGTGTGACTATTCCATGA+AGG | 0.657511 | 1.1:-8260452 | MS.gene33174:intron |
| ATTTATGTAAAATTATGCTG+CGG | 0.661529 | 1.1:+8259255 | None:intergenic |
| AGAACCTGATCCATTCCAGA+AGG | 0.663960 | 1.1:+8263616 | None:intergenic |
| TTACAGGTCCATTCTCCTCG+GGG | 0.680836 | 1.1:+8262320 | None:intergenic |
| TGTTGGTAACATATTACACA+AGG | 0.688104 | 1.1:-8261802 | MS.gene33174:CDS |
| ACACTTTCTGGAACACCAGG+TGG | 0.696694 | 1.1:+8260242 | None:intergenic |
| GCTAAGAAAGTACTACCCCG+AGG | 0.782953 | 1.1:-8262335 | MS.gene33174:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAGAATTTAATAATAGAT+CGG | + | chr1.1:8263510-8263529 | None:intergenic | 10.0% |
| !!! | GTTTTTTATTTTTTTTATCT+AGG | + | chr1.1:8259389-8259408 | None:intergenic | 10.0% |
| !! | AAAGTTAAAAAAATGTATTG+GGG | - | chr1.1:8264001-8264020 | MS.gene33174:intron | 15.0% |
| !! | AACAAAACAAATTTCAAAAA+TGG | - | chr1.1:8259915-8259934 | MS.gene33174:intron | 15.0% |
| !! | AAGTTATGTTATATATTAGA+TGG | + | chr1.1:8259652-8259671 | None:intergenic | 15.0% |
| !! | ACAAAACAAATTTCAAAAAT+GGG | - | chr1.1:8259916-8259935 | MS.gene33174:intron | 15.0% |
| !! | GAAAGTTAAAAAAATGTATT+GGG | - | chr1.1:8264000-8264019 | MS.gene33174:intron | 15.0% |
| !! | TCAAAAAAGAAAAAACAAAA+AGG | - | chr1.1:8264185-8264204 | MS.gene33174:intron | 15.0% |
| !! | TGAAAGTTAAAAAAATGTAT+TGG | - | chr1.1:8263999-8264018 | MS.gene33174:intron | 15.0% |
| !!! | AATTTCAAAAGTTATTTTGA+AGG | - | chr1.1:8261192-8261211 | MS.gene33174:intron | 15.0% |
| !!! | ATGATGTATTCATTTTTTTT+TGG | - | chr1.1:8263239-8263258 | MS.gene33174:intron | 15.0% |
| !!! | ATGATTTGTTTATAAACAAT+CGG | + | chr1.1:8264499-8264518 | None:intergenic | 15.0% |
| !!! | ATTTCAAACTTTTTTTACAA+GGG | - | chr1.1:8259445-8259464 | MS.gene33174:intron | 15.0% |
| !!! | ATTTGAGTCATTTTTTATTT+TGG | + | chr1.1:8259692-8259711 | None:intergenic | 15.0% |
| !!! | CTGTAATTTGTAATTTTTTT+TGG | - | chr1.1:8260868-8260887 | MS.gene33174:intron | 15.0% |
| !!! | TAAATTTCATTTTCTATTCT+AGG | - | chr1.1:8261410-8261429 | MS.gene33174:intron | 15.0% |
| !!! | TTATGTCTAATTTTACAATT+TGG | - | chr1.1:8264614-8264633 | MS.gene33174:intron | 15.0% |
| !!! | TTTAATTTTGCAAAAATGAT+AGG | - | chr1.1:8261892-8261911 | MS.gene33174:intron | 15.0% |
| !!! | TTTTTTCTTTTTTGAAAACT+TGG | + | chr1.1:8264180-8264199 | None:intergenic | 15.0% |
| !! | AAACAAATCTAACACTTTAA+AGG | - | chr1.1:8262639-8262658 | MS.gene33174:intron | 20.0% |
| !! | ATAGTCTGATTTCAATAAAA+TGG | - | chr1.1:8260982-8261001 | MS.gene33174:intron | 20.0% |
| !! | CTTGTAAAAAAAGTTTGAAA+TGG | + | chr1.1:8259446-8259465 | None:intergenic | 20.0% |
| !! | GCAATGAAGAATTATATTTA+AGG | - | chr1.1:8262306-8262325 | MS.gene33174:CDS | 20.0% |
| !! | GTACTAAAAATCACTTATAT+GGG | - | chr1.1:8263327-8263346 | MS.gene33174:intron | 20.0% |
| !! | TACTTTATACTATTAAACGA+TGG | + | chr1.1:8259592-8259611 | None:intergenic | 20.0% |
| !! | TATGTTATATATTAGATGGA+TGG | + | chr1.1:8259648-8259667 | None:intergenic | 20.0% |
| !! | TATTAATGTATGTTCCTTTA+TGG | - | chr1.1:8261298-8261317 | MS.gene33174:intron | 20.0% |
| !! | TCATAGAAAAGTTAAAAGAA+AGG | - | chr1.1:8262888-8262907 | MS.gene33174:intron | 20.0% |
| !! | TGTACTAAAAATCACTTATA+TGG | - | chr1.1:8263326-8263345 | MS.gene33174:intron | 20.0% |
| !!! | AATATCCAGATATTTTGTAT+GGG | + | chr1.1:8262957-8262976 | None:intergenic | 20.0% |
| !!! | ATAGTACTATACTTGATTTT+GGG | - | chr1.1:8260580-8260599 | MS.gene33174:intron | 20.0% |
| !!! | ATTATTTGTTTTTCCTGAAT+AGG | - | chr1.1:8264457-8264476 | MS.gene33174:intron | 20.0% |
| !!! | ATTCTGAAACTAAAAATTCT+TGG | - | chr1.1:8261095-8261114 | MS.gene33174:intron | 20.0% |
| !!! | ATTTAACTCAATCAGTTTTA+AGG | - | chr1.1:8263838-8263857 | MS.gene33174:intron | 20.0% |
| !!! | ATTTTATTGAAATCAGACTA+TGG | + | chr1.1:8260983-8261002 | None:intergenic | 20.0% |
| !!! | CATTTCAAACTTTTTTTACA+AGG | - | chr1.1:8259444-8259463 | MS.gene33174:intron | 20.0% |
| !!! | GTTGATTTGTATAAATGATT+GGG | - | chr1.1:8260393-8260412 | MS.gene33174:intron | 20.0% |
| !!! | TAATATCCAGATATTTTGTA+TGG | + | chr1.1:8262958-8262977 | None:intergenic | 20.0% |
| !!! | TATAGTACTATACTTGATTT+TGG | - | chr1.1:8260579-8260598 | MS.gene33174:intron | 20.0% |
| !!! | TGTTGATTTGTATAAATGAT+TGG | - | chr1.1:8260392-8260411 | MS.gene33174:intron | 20.0% |
| !!! | TTTCAAACTTTTTTTACAAG+GGG | - | chr1.1:8259446-8259465 | MS.gene33174:intron | 20.0% |
| !!! | TTTCTGGTAATTATGATTTA+TGG | - | chr1.1:8261699-8261718 | MS.gene33174:intron | 20.0% |
| ! | AAAAAATGAGTCATGCTATA+TGG | - | chr1.1:8262554-8262573 | MS.gene33174:intron | 25.0% |
| ! | AAAGAAAAAACAAAAAGGTG+AGG | - | chr1.1:8264190-8264209 | MS.gene33174:intron | 25.0% |
| ! | AAGAAAAAACAAAAAGGTGA+GGG | - | chr1.1:8264191-8264210 | MS.gene33174:intron | 25.0% |
| ! | AAGAGATATGTAGAAATCAA+TGG | + | chr1.1:8262261-8262280 | None:intergenic | 25.0% |
| ! | AAGCAAATGAGAATTAAACA+TGG | + | chr1.1:8263292-8263311 | None:intergenic | 25.0% |
| ! | ACGATATGATTTGATAAGAT+TGG | + | chr1.1:8263018-8263037 | None:intergenic | 25.0% |
| ! | ACTTGATATACTAACACTTA+AGG | + | chr1.1:8262437-8262456 | None:intergenic | 25.0% |
| ! | AGCAAATGAGAATTAAACAT+GGG | + | chr1.1:8263291-8263310 | None:intergenic | 25.0% |
| ! | AGTGTAGAGTTATGTATTAT+TGG | - | chr1.1:8260172-8260191 | MS.gene33174:intron | 25.0% |
| ! | ATAAAATGGCCTAATATTCT+TGG | - | chr1.1:8260996-8261015 | MS.gene33174:intron | 25.0% |
| ! | ATGTTACTGAGAATGTTATT+AGG | + | chr1.1:8259966-8259985 | None:intergenic | 25.0% |
| ! | ATTAGATGACCTTAAAATCA+AGG | + | chr1.1:8264423-8264442 | None:intergenic | 25.0% |
| ! | GCATGCTCTTTAATTATTAA+TGG | - | chr1.1:8259745-8259764 | MS.gene33174:intron | 25.0% |
| ! | GTGTGTGAATTAAATACTTA+TGG | - | chr1.1:8261839-8261858 | MS.gene33174:intron | 25.0% |
| ! | TAACCAATATAGATCCAATT+GGG | - | chr1.1:8261634-8261653 | MS.gene33174:intron | 25.0% |
| ! | TATTTCCCATACAAAATATC+TGG | - | chr1.1:8262949-8262968 | MS.gene33174:intron | 25.0% |
| ! | TCATAATTCACTACACTTAT+GGG | - | chr1.1:8263463-8263482 | MS.gene33174:intron | 25.0% |
| ! | TTAAAAAAATGTATTGGGGT+GGG | - | chr1.1:8264005-8264024 | MS.gene33174:intron | 25.0% |
| ! | TTAACCTATGTAATATTGCA+TGG | - | chr1.1:8259337-8259356 | MS.gene33174:intron | 25.0% |
| ! | TTAATGAACTCTTCTAAACA+AGG | + | chr1.1:8262483-8262502 | None:intergenic | 25.0% |
| ! | TTAGATGACCTTAAAATCAA+GGG | + | chr1.1:8264422-8264441 | None:intergenic | 25.0% |
| ! | TTCATAATTCACTACACTTA+TGG | - | chr1.1:8263462-8263481 | MS.gene33174:intron | 25.0% |
| ! | TTGAAATCACTACTGTTATT+TGG | - | chr1.1:8260785-8260804 | MS.gene33174:intron | 25.0% |
| ! | TTTGAAGGTTCATTAATTCT+GGG | - | chr1.1:8261207-8261226 | MS.gene33174:intron | 25.0% |
| !! | ACAGTGTAGAACTTTTTATA+CGG | + | chr1.1:8261752-8261771 | None:intergenic | 25.0% |
| !! | ATAAAAATCAAGTTGTTGTG+AGG | + | chr1.1:8262056-8262075 | None:intergenic | 25.0% |
| !! | ATATATTAGATGGATGGATT+AGG | + | chr1.1:8259642-8259661 | None:intergenic | 25.0% |
| !! | ATTAATTTGAGAAATGCTAG+TGG | - | chr1.1:8260466-8260485 | MS.gene33174:CDS | 25.0% |
| !! | ATTTGAAATCCTTGACTAAA+TGG | + | chr1.1:8262402-8262421 | None:intergenic | 25.0% |
| !! | CTATTTTGTATTGTTGATAC+AGG | - | chr1.1:8262077-8262096 | MS.gene33174:intron | 25.0% |
| !! | TAGTACTATACTTGATTTTG+GGG | - | chr1.1:8260581-8260600 | MS.gene33174:intron | 25.0% |
| !! | TTTTAGTACAATGTTGGAAA+TGG | + | chr1.1:8263316-8263335 | None:intergenic | 25.0% |
| !!! | AAAGATGGTATTTTTGTGTT+TGG | - | chr1.1:8260604-8260623 | MS.gene33174:intron | 25.0% |
| !!! | AGTGATTTTTAGTACAATGT+TGG | + | chr1.1:8263322-8263341 | None:intergenic | 25.0% |
| !!! | CATTTTCTATTCTAGGATTT+TGG | - | chr1.1:8261417-8261436 | MS.gene33174:intron | 25.0% |
| !!! | TCTTCTTGTTTTGAATGTTT+GGG | - | chr1.1:8264574-8264593 | MS.gene33174:intron | 25.0% |
| !!! | TTATTGGTTTAAGAAGATGA+AGG | - | chr1.1:8260188-8260207 | MS.gene33174:intron | 25.0% |
| !!! | TTTATTCTCTGAAATTTGTG+TGG | - | chr1.1:8261145-8261164 | MS.gene33174:intron | 25.0% |
| !!! | TTTTGAAGGTTCATTAATTC+TGG | - | chr1.1:8261206-8261225 | MS.gene33174:intron | 25.0% |
| !!! | TTTTTTGAAAACTTGGTATC+CGG | + | chr1.1:8264173-8264192 | None:intergenic | 25.0% |
| AACCAATTTGAGTAAAGTCA+TGG | - | chr1.1:8264283-8264302 | MS.gene33174:intron | 30.0% | |
| AAGTGTTAGTATATCAAGTG+TGG | - | chr1.1:8262438-8262457 | MS.gene33174:CDS | 30.0% | |
| ACAAAGTCAACTATCAACTT+TGG | + | chr1.1:8260691-8260710 | None:intergenic | 30.0% | |
| ACATACAACATCATTATCTC+AGG | - | chr1.1:8259991-8260010 | MS.gene33174:intron | 30.0% | |
| ACATTGTTCTTAATAGACCA+TGG | - | chr1.1:8261328-8261347 | MS.gene33174:intron | 30.0% | |
| AGAAAGACATTCATACTGTT+TGG | - | chr1.1:8264380-8264399 | MS.gene33174:intron | 30.0% | |
| AGCACTTTCTCATATTTCTT+AGG | + | chr1.1:8261582-8261601 | None:intergenic | 30.0% | |
| ATCCATGACTTTACTCAAAT+TGG | + | chr1.1:8264288-8264307 | None:intergenic | 30.0% | |
| ATGACTTTACTCAAATTGGT+TGG | + | chr1.1:8264284-8264303 | None:intergenic | 30.0% | |
| ATGTATGGTGTGAAATAATC+AGG | - | chr1.1:8263583-8263602 | MS.gene33174:intron | 30.0% | |
| ATTCCCAATTGGATCTATAT+TGG | + | chr1.1:8261640-8261659 | None:intergenic | 30.0% | |
| ATTTGAGTAAAGTCATGGAT+TGG | - | chr1.1:8264288-8264307 | MS.gene33174:intron | 30.0% | |
| CAAATCATATCGTGTAAACA+GGG | - | chr1.1:8263025-8263044 | MS.gene33174:intron | 30.0% | |
| CATTGTTCTTAATAGACCAT+GGG | - | chr1.1:8261329-8261348 | MS.gene33174:intron | 30.0% | |
| CTGATTCTGTTTACAATACA+TGG | - | chr1.1:8260148-8260167 | MS.gene33174:intron | 30.0% | |
| GAAAGACATTCATACTGTTT+GGG | - | chr1.1:8264381-8264400 | MS.gene33174:intron | 30.0% | |
| GAACTGACATATGGAAAAAT+TGG | - | chr1.1:8263608-8263627 | MS.gene33174:intron | 30.0% | |
| GATTTGATAAGATTGGAAAC+TGG | + | chr1.1:8263011-8263030 | None:intergenic | 30.0% | |
| GCAATCACTATTTGACTATA+AGG | + | chr1.1:8260820-8260839 | None:intergenic | 30.0% | |
| GTAACCAATATAGATCCAAT+TGG | - | chr1.1:8261633-8261652 | MS.gene33174:intron | 30.0% | |
| GTTAAAAAAATGTATTGGGG+TGG | - | chr1.1:8264004-8264023 | MS.gene33174:intron | 30.0% | |
| TAATTTAGTCCCTAAAACAG+TGG | - | chr1.1:8261029-8261048 | MS.gene33174:intron | 30.0% | |
| TACTTGATCTTGGTGAAAAA+TGG | - | chr1.1:8260422-8260441 | MS.gene33174:intron | 30.0% | |
| TAGGCTCGATATAAAAGAAA+GGG | + | chr1.1:8261563-8261582 | None:intergenic | 30.0% | |
| TAGTTGAGTTTGAGTGATTT+AGG | - | chr1.1:8260508-8260527 | MS.gene33174:intron | 30.0% | |
| TATAGTCAAATAGTGATTGC+AGG | - | chr1.1:8260820-8260839 | MS.gene33174:intron | 30.0% | |
| TATGCCATGCAATATTACAT+AGG | + | chr1.1:8259344-8259363 | None:intergenic | 30.0% | |
| TCAAACTCAACTATCAACTA+TGG | + | chr1.1:8260501-8260520 | None:intergenic | 30.0% | |
| TCAAATCATATCGTGTAAAC+AGG | - | chr1.1:8263024-8263043 | MS.gene33174:intron | 30.0% | |
| TGACTTTACTCAAATTGGTT+GGG | + | chr1.1:8264283-8264302 | None:intergenic | 30.0% | |
| TGATTCACTCCAAGAATATT+AGG | + | chr1.1:8261008-8261027 | None:intergenic | 30.0% | |
| TGGTAAAACTGATCAGTATA+TGG | - | chr1.1:8260263-8260282 | MS.gene33174:CDS | 30.0% | |
| TGTATGGTGTGAAATAATCA+GGG | - | chr1.1:8263584-8263603 | MS.gene33174:intron | 30.0% | |
| TTAGGCTCGATATAAAAGAA+AGG | + | chr1.1:8261564-8261583 | None:intergenic | 30.0% | |
| TTGAAGGTTCATTAATTCTG+GGG | - | chr1.1:8261208-8261227 | MS.gene33174:intron | 30.0% | |
| TTGCTTAAGTCGTTAATGTA+TGG | - | chr1.1:8263568-8263587 | MS.gene33174:intron | 30.0% | |
| TTTAAACTGAGAAATGCTAG+TGG | - | chr1.1:8260656-8260675 | MS.gene33174:intron | 30.0% | |
| TTTAAGAAGATGAAGGAAAG+TGG | - | chr1.1:8260195-8260214 | MS.gene33174:intron | 30.0% | |
| TTTGAATGTTTGGGAGATTT+GGG | - | chr1.1:8264583-8264602 | MS.gene33174:intron | 30.0% | |
| TTTGAGAGTTTAGATCAGAA+AGG | - | chr1.1:8263866-8263885 | MS.gene33174:intron | 30.0% | |
| TTTGAGTAAAGTCATGGATT+GGG | - | chr1.1:8264289-8264308 | MS.gene33174:intron | 30.0% | |
| ! | AAGAGGGTATATGATAACAA+TGG | + | chr1.1:8264333-8264352 | None:intergenic | 30.0% |
| ! | ATTGGATCTATATTGGTTAC+AGG | + | chr1.1:8261633-8261652 | None:intergenic | 30.0% |
| ! | GATTGGTCATACAAATTAGT+TGG | - | chr1.1:8264139-8264158 | MS.gene33174:intron | 30.0% |
| ! | TAGTTGACTTTGTGTGATTT+AGG | - | chr1.1:8260698-8260717 | MS.gene33174:intron | 30.0% |
| ! | TCACTACTGTTATTTGGAAA+TGG | - | chr1.1:8260791-8260810 | MS.gene33174:intron | 30.0% |
| ! | TCTTCAAACAAGAAGCTTTT+TGG | - | chr1.1:8263176-8263195 | MS.gene33174:intron | 30.0% |
| ! | TTGGTTACATTAGTCCTTTT+GGG | - | chr1.1:8261114-8261133 | MS.gene33174:intron | 30.0% |
| ! | TTTACTAGGATTTTGCATTC+TGG | - | chr1.1:8260243-8260262 | MS.gene33174:CDS | 30.0% |
| ! | TTTATTGATGGTTTACGTGA+AGG | + | chr1.1:8260048-8260067 | None:intergenic | 30.0% |
| ! | TTTTCCTGAATAGGAACAAT+TGG | - | chr1.1:8264466-8264485 | MS.gene33174:intron | 30.0% |
| ! | TTTTGAATGTTTGGGAGATT+TGG | - | chr1.1:8264582-8264601 | MS.gene33174:intron | 30.0% |
| !! | AGCACAGTTTTTCTTTAAGA+GGG | + | chr1.1:8264349-8264368 | None:intergenic | 30.0% |
| !! | ATCTGTCATTTAGTTCTTTC+TGG | - | chr1.1:8261683-8261702 | MS.gene33174:intron | 30.0% |
| !! | CAAATTTCAAAAATGGGTTG+TGG | - | chr1.1:8259922-8259941 | MS.gene33174:intron | 30.0% |
| !! | GAAGAAGTTGGTGAATTATT+AGG | + | chr1.1:8259857-8259876 | None:intergenic | 30.0% |
| !! | TACTTCTAAAATCACACGTA+TGG | + | chr1.1:8261794-8261813 | None:intergenic | 30.0% |
| !! | TGTTGGTAACATATTACACA+AGG | - | chr1.1:8262132-8262151 | MS.gene33174:intron | 30.0% |
| !! | TTCATGATTCAGGTTGAATA+AGG | - | chr1.1:8262157-8262176 | MS.gene33174:intron | 30.0% |
| !!! | CAATTTGGTTTTCCTTTTCT+AGG | - | chr1.1:8264629-8264648 | MS.gene33174:intron | 30.0% |
| !!! | CTCTTCTTGTTTTGAATGTT+TGG | - | chr1.1:8264573-8264592 | MS.gene33174:intron | 30.0% |
| !!! | GAAGCACTTTTTCTATTAAG+TGG | + | chr1.1:8260093-8260112 | None:intergenic | 30.0% |
| !!! | TGTGTCGGTTTTGTTTTTTT+GGG | - | chr1.1:8263777-8263796 | MS.gene33174:intron | 30.0% |
| AAAGGTTGAGCAACAAAAGT+AGG | + | chr1.1:8260297-8260316 | None:intergenic | 35.0% | |
| AAATTAGTTGGTCCTTGAAC+CGG | - | chr1.1:8264151-8264170 | MS.gene33174:intron | 35.0% | |
| AACATGGATGAATGTTTCCT+TGG | - | chr1.1:8261937-8261956 | MS.gene33174:intron | 35.0% | |
| AAGGAAACATTCATCCATGT+TGG | + | chr1.1:8261938-8261957 | None:intergenic | 35.0% | |
| AAGGTTGAGCAACAAAAGTA+GGG | + | chr1.1:8260296-8260315 | None:intergenic | 35.0% | |
| AATAAACTGATCGACCCAAA+AGG | + | chr1.1:8261131-8261150 | None:intergenic | 35.0% | |
| AATGTATGTTCCTTTATGGC+AGG | - | chr1.1:8261302-8261321 | MS.gene33174:intron | 35.0% | |
| ACAACACTACATGTACACAT+CGG | - | chr1.1:8263534-8263553 | MS.gene33174:intron | 35.0% | |
| ACTTTACCCACAACAAGTAT+TGG | - | chr1.1:8262683-8262702 | MS.gene33174:intron | 35.0% | |
| AGAGTTTAGATCAGAAAGGA+GGG | - | chr1.1:8263870-8263889 | MS.gene33174:intron | 35.0% | |
| AGGATAAAGACTAGAGGATA+GGG | - | chr1.1:8263902-8263921 | MS.gene33174:intron | 35.0% | |
| AGTAGTCTCTTATCTTGCAT+AGG | - | chr1.1:8263938-8263957 | MS.gene33174:intron | 35.0% | |
| ATAATAGATCGGTACCTTCA+TGG | + | chr1.1:8263499-8263518 | None:intergenic | 35.0% | |
| ATGAAACATACCACACTTTC+TGG | + | chr1.1:8263707-8263726 | None:intergenic | 35.0% | |
| ATGTATGTTCCTTTATGGCA+GGG | - | chr1.1:8261303-8261322 | MS.gene33174:intron | 35.0% | |
| ATGTTGGAGCAATCTTCTTA+AGG | + | chr1.1:8261922-8261941 | None:intergenic | 35.0% | |
| ATTACAGGTGAATTCCCAAT+TGG | + | chr1.1:8261651-8261670 | None:intergenic | 35.0% | |
| CATATGGAAAAATTGGAGAG+TGG | - | chr1.1:8263615-8263634 | MS.gene33174:intron | 35.0% | |
| CTCTTAAAGAAAAACTGTGC+TGG | - | chr1.1:8264348-8264367 | MS.gene33174:intron | 35.0% | |
| GAGAAAAAACGAGAGATATG+TGG | + | chr1.1:8263134-8263153 | None:intergenic | 35.0% | |
| GATAGTACTACTTAGAGAAG+TGG | + | chr1.1:8262025-8262044 | None:intergenic | 35.0% | |
| GGTTTCACAATGATATGATC+TGG | + | chr1.1:8261501-8261520 | None:intergenic | 35.0% | |
| GTGTTATCAAGGTTCTCATA+TGG | - | chr1.1:8262212-8262231 | MS.gene33174:intron | 35.0% | |
| GTTATGAGGATAAAGACTAG+AGG | - | chr1.1:8263896-8263915 | MS.gene33174:intron | 35.0% | |
| TAAGTGGCATCTTGATTACT+GGG | + | chr1.1:8260077-8260096 | None:intergenic | 35.0% | |
| TACCACAATAAGTGTTCAAG+AGG | - | chr1.1:8262510-8262529 | MS.gene33174:intron | 35.0% | |
| TACGTATTATAGAGAGAGAG+AGG | + | chr1.1:8264051-8264070 | None:intergenic | 35.0% | |
| TACGTGATTCCTATAGTAAC+AGG | + | chr1.1:8263203-8263222 | None:intergenic | 35.0% | |
| TATTAGGCGGCTATATGAAA+GGG | + | chr1.1:8259841-8259860 | None:intergenic | 35.0% | |
| TCAAAACAAGAAGAGCTTGA+AGG | + | chr1.1:8264568-8264587 | None:intergenic | 35.0% | |
| TGTGAAGAAGAAGAAGAAGT+TGG | + | chr1.1:8259869-8259888 | None:intergenic | 35.0% | |
| TGTTGGAGCAATCTTCTTAA+GGG | + | chr1.1:8261921-8261940 | None:intergenic | 35.0% | |
| TTAAGAAGATTGCTCCAACA+TGG | - | chr1.1:8261921-8261940 | MS.gene33174:intron | 35.0% | |
| TTAAGTGGCATCTTGATTAC+TGG | + | chr1.1:8260078-8260097 | None:intergenic | 35.0% | |
| TTATTAGGCGGCTATATGAA+AGG | + | chr1.1:8259842-8259861 | None:intergenic | 35.0% | |
| ! | AAACCGATAAAGCTTTTGGA+TGG | - | chr1.1:8261978-8261997 | MS.gene33174:CDS | 35.0% |
| ! | AAATTTGTCCTCAAGTTGTG+GGG | + | chr1.1:8261248-8261267 | None:intergenic | 35.0% |
| ! | AACCGATAAAGCTTTTGGAT+GGG | - | chr1.1:8261979-8261998 | MS.gene33174:CDS | 35.0% |
| ! | AACGGTTAAGATTTGAAGCT+TGG | + | chr1.1:8260901-8260920 | None:intergenic | 35.0% |
| ! | CAAATTTGTCCTCAAGTTGT+GGG | + | chr1.1:8261249-8261268 | None:intergenic | 35.0% |
| ! | CAGCACAGTTTTTCTTTAAG+AGG | + | chr1.1:8264350-8264369 | None:intergenic | 35.0% |
| ! | CTATGGATCCCTTGATTTTA+AGG | - | chr1.1:8264411-8264430 | MS.gene33174:intron | 35.0% |
| ! | CTTGGTTACATTAGTCCTTT+TGG | - | chr1.1:8261113-8261132 | MS.gene33174:intron | 35.0% |
| ! | TCAAATTTGTCCTCAAGTTG+TGG | + | chr1.1:8261250-8261269 | None:intergenic | 35.0% |
| !! | AACTGTCCAATACTTGTTGT+GGG | + | chr1.1:8262692-8262711 | None:intergenic | 35.0% |
| !! | ACTGGGTCGATTTTTATTGA+TGG | + | chr1.1:8260060-8260079 | None:intergenic | 35.0% |
| !! | CTTTTTGGTCCTGTTACTAT+AGG | - | chr1.1:8263191-8263210 | MS.gene33174:intron | 35.0% |
| !! | GAAGTTGGTGAATTATTAGG+CGG | + | chr1.1:8259854-8259873 | None:intergenic | 35.0% |
| !! | TACTTGATTTTGGGGAAAGA+TGG | - | chr1.1:8260589-8260608 | MS.gene33174:intron | 35.0% |
| !! | TATCTCGTTGGTGTTGAAAA+AGG | + | chr1.1:8259805-8259824 | None:intergenic | 35.0% |
| !!! | AGTGAGGTTGGTAGATTTTT+AGG | - | chr1.1:8260760-8260779 | MS.gene33174:intron | 35.0% |
| !!! | GTGAGGTTGGTAGATTTTTA+GGG | - | chr1.1:8260761-8260780 | MS.gene33174:intron | 35.0% |
| !!! | GTGTGTCGGTTTTGTTTTTT+TGG | - | chr1.1:8263776-8263795 | MS.gene33174:intron | 35.0% |
| !!! | TCCTTCACTTTTTTGTGTGT+CGG | - | chr1.1:8263762-8263781 | MS.gene33174:CDS | 35.0% |
| !!! | TCGGTTTTGTTTTTTTGGGA+GGG | - | chr1.1:8263781-8263800 | MS.gene33174:intron | 35.0% |
| AAAACTTGGTATCCGGTTCA+AGG | + | chr1.1:8264166-8264185 | None:intergenic | 40.0% | |
| AACTTAGCCAGAGATGGAAT+GGG | - | chr1.1:8261528-8261547 | MS.gene33174:intron | 40.0% | |
| AAGTAACCACACTAACACGA+AGG | + | chr1.1:8263733-8263752 | None:intergenic | 40.0% | |
| AAGTTGTTGTGAGGCTAAGA+AGG | + | chr1.1:8262047-8262066 | None:intergenic | 40.0% | |
| AATCAGGGTGAACTGACATA+TGG | - | chr1.1:8263599-8263618 | MS.gene33174:intron | 40.0% | |
| ACAATGTAACCCTGCCATAA+AGG | + | chr1.1:8261315-8261334 | None:intergenic | 40.0% | |
| ACACAAGGACTTCATGATTC+AGG | - | chr1.1:8262147-8262166 | MS.gene33174:intron | 40.0% | |
| ACACGACTTCAAGTAAAGCA+CGG | - | chr1.1:8262357-8262376 | MS.gene33174:CDS | 40.0% | |
| ACAGCGGAAGACTCTATATA+GGG | + | chr1.1:8263088-8263107 | None:intergenic | 40.0% | |
| ACCGACACACAAAAAAGTGA+AGG | + | chr1.1:8263766-8263785 | None:intergenic | 40.0% | |
| ACTGCAAATCACTCATGTCT+GGG | + | chr1.1:8262794-8262813 | None:intergenic | 40.0% | |
| AGTATATCAAGTGTGGTGAG+TGG | - | chr1.1:8262445-8262464 | MS.gene33174:CDS | 40.0% | |
| AGTTGTGGGGTAGGTAAAAT+TGG | + | chr1.1:8261235-8261254 | None:intergenic | 40.0% | |
| AGTTTAGATCAGAAAGGAGG+GGG | - | chr1.1:8263872-8263891 | MS.gene33174:intron | 40.0% | |
| ATGGAAAAATTGGAGAGTGG+AGG | - | chr1.1:8263618-8263637 | MS.gene33174:intron | 40.0% | |
| ATTATGTATGTCAGCCACCA+TGG | - | chr1.1:8263418-8263437 | MS.gene33174:intron | 40.0% | |
| ATTCCATCTCTGGCTAAGTT+GGG | + | chr1.1:8261528-8261547 | None:intergenic | 40.0% | |
| CAATCTCAAAATCCACTTGC+AGG | + | chr1.1:8264124-8264143 | None:intergenic | 40.0% | |
| CACCTCTTGAACACTTATTG+TGG | + | chr1.1:8262515-8262534 | None:intergenic | 40.0% | |
| CCAGGAAAATCTTGTCTCAA+AGG | + | chr1.1:8260024-8260043 | None:intergenic | 40.0% | |
| GAGAGTTTAGATCAGAAAGG+AGG | - | chr1.1:8263869-8263888 | MS.gene33174:intron | 40.0% | |
| GAGGATAAAGACTAGAGGAT+AGG | - | chr1.1:8263901-8263920 | MS.gene33174:intron | 40.0% | |
| GAGTTTAGATCAGAAAGGAG+GGG | - | chr1.1:8263871-8263890 | MS.gene33174:intron | 40.0% | |
| GATACCTTGCCAACAATTAC+AGG | + | chr1.1:8261666-8261685 | None:intergenic | 40.0% | |
| GGATTTCAAATGTCCTGCAT+AGG | - | chr1.1:8262411-8262430 | MS.gene33174:CDS | 40.0% | |
| GGCTTGGATGTTGTTGTAAA+CGG | + | chr1.1:8260919-8260938 | None:intergenic | 40.0% | |
| GGGAATTCACCTGTAATTGT+TGG | - | chr1.1:8261654-8261673 | MS.gene33174:intron | 40.0% | |
| GGTGATGACAATTCTGGTAT+GGG | - | chr1.1:8260216-8260235 | MS.gene33174:intron | 40.0% | |
| GGTTCTCATATGGCAATATG+TGG | - | chr1.1:8262222-8262241 | MS.gene33174:intron | 40.0% | |
| GTGACATCTCATCAACAAAG+CGG | - | chr1.1:8262836-8262855 | MS.gene33174:intron | 40.0% | |
| GTGTGTTATGAACTACACAG+CGG | + | chr1.1:8263104-8263123 | None:intergenic | 40.0% | |
| TAAAGACTAGAGGATAGGGA+AGG | - | chr1.1:8263906-8263925 | MS.gene33174:intron | 40.0% | |
| TACTGTCCTGTGTGTTATCA+AGG | - | chr1.1:8262201-8262220 | MS.gene33174:intron | 40.0% | |
| TAGAGGATAGGGAAGGATAA+TGG | - | chr1.1:8263913-8263932 | MS.gene33174:intron | 40.0% | |
| TCCCTAAAACAGTGGATAAC+AGG | - | chr1.1:8261037-8261056 | MS.gene33174:intron | 40.0% | |
| TGAGCCAATTGTTCCTATTC+AGG | + | chr1.1:8264473-8264492 | None:intergenic | 40.0% | |
| TGGATGAACTAACGTGATTG+AGG | - | chr1.1:8261165-8261184 | MS.gene33174:intron | 40.0% | |
| TGTTTCCTTGGCAATGAAGA+AGG | - | chr1.1:8261949-8261968 | MS.gene33174:CDS | 40.0% | |
| TTACTCAAATTGGTTGGGCT+CGG | + | chr1.1:8264278-8264297 | None:intergenic | 40.0% | |
| TTATGTATGTCAGCCACCAT+GGG | - | chr1.1:8263419-8263438 | MS.gene33174:intron | 40.0% | |
| TTCACCTGTAATTGTTGGCA+AGG | - | chr1.1:8261659-8261678 | MS.gene33174:intron | 40.0% | |
| TTGTGCTAGGAGGAACAAAA+GGG | + | chr1.1:8264225-8264244 | None:intergenic | 40.0% | |
| TTTGTGCTAGGAGGAACAAA+AGG | + | chr1.1:8264226-8264245 | None:intergenic | 40.0% | |
| ! | CAACTGTCCAATACTTGTTG+TGG | + | chr1.1:8262693-8262712 | None:intergenic | 40.0% |
| ! | CACCCATCCAAAAGCTTTAT+CGG | + | chr1.1:8261984-8262003 | None:intergenic | 40.0% |
| ! | CATTGACTAAACTGTGAGTG+AGG | - | chr1.1:8260744-8260763 | MS.gene33174:intron | 40.0% |
| ! | CCTGAAACCGATAAAGCTTT+TGG | - | chr1.1:8261974-8261993 | MS.gene33174:CDS | 40.0% |
| ! | GAAAGTGGTGATGACAATTC+TGG | - | chr1.1:8260210-8260229 | MS.gene33174:intron | 40.0% |
| ! | GCCTGTTATCCACTGTTTTA+GGG | + | chr1.1:8261041-8261060 | None:intergenic | 40.0% |
| ! | TGAGAACCTTGATAACACAC+AGG | + | chr1.1:8262210-8262229 | None:intergenic | 40.0% |
| ! | TGCCTGTTATCCACTGTTTT+AGG | + | chr1.1:8261042-8261061 | None:intergenic | 40.0% |
| ! | TGGGAAAGTGTACTTGATCT+TGG | - | chr1.1:8260412-8260431 | MS.gene33174:intron | 40.0% |
| ! | TGGTGATGACAATTCTGGTA+TGG | - | chr1.1:8260215-8260234 | MS.gene33174:intron | 40.0% |
| ! | TGGTTCTGTCTATATCTCGT+TGG | + | chr1.1:8259817-8259836 | None:intergenic | 40.0% |
| !! | CCAAAAGCTTTATCGGTTTC+AGG | + | chr1.1:8261977-8261996 | None:intergenic | 40.0% |
| !! | TGTGTACTAGTCTTTGTGCT+AGG | + | chr1.1:8264238-8264257 | None:intergenic | 40.0% |
| !!! | CCTTTGAGACAAGATTTTCC+TGG | - | chr1.1:8260021-8260040 | MS.gene33174:intron | 40.0% |
| !!! | CGGTTTTGTTTTTTTGGGAG+GGG | - | chr1.1:8263782-8263801 | MS.gene33174:intron | 40.0% |
| !!! | CTGCAAGTGGATTTTGAGAT+TGG | - | chr1.1:8264122-8264141 | MS.gene33174:intron | 40.0% |
| !!! | GGAGAGTGTTTTTGAAAGAG+AGG | + | chr1.1:8264103-8264122 | None:intergenic | 40.0% |
| !!! | GGTGGCAATGTCAGATTTTT+TGG | + | chr1.1:8263674-8263693 | None:intergenic | 40.0% |
| !!! | GGTTTTGTTTTTTTGGGAGG+GGG | - | chr1.1:8263783-8263802 | MS.gene33174:intron | 40.0% |
| !!! | GTCGGTTTTGTTTTTTTGGG+AGG | - | chr1.1:8263780-8263799 | MS.gene33174:intron | 40.0% |
| !!! | GTTTTGTTTTTTTGGGAGGG+GGG | - | chr1.1:8263784-8263803 | MS.gene33174:intron | 40.0% |
| ACCATGAAGAGCAGACGAAA+CGG | + | chr1.1:8262113-8262132 | None:intergenic | 45.0% | |
| ACTGTTTGGGAGAGTTGCTA+TGG | - | chr1.1:8264394-8264413 | MS.gene33174:intron | 45.0% | |
| AGAACCTGATCCATTCCAGA+AGG | + | chr1.1:8260321-8260340 | None:intergenic | 45.0% | |
| AGCTTGAAGGAAACGTGTGA+TGG | + | chr1.1:8264555-8264574 | None:intergenic | 45.0% | |
| AGGATCCTTCTTCATTGCCA+AGG | + | chr1.1:8261957-8261976 | None:intergenic | 45.0% | |
| ATACCCAACTTAGCCAGAGA+TGG | - | chr1.1:8261522-8261541 | MS.gene33174:intron | 45.0% | |
| CAAAAACACTCTCCTGCAAG+TGG | - | chr1.1:8264109-8264128 | MS.gene33174:intron | 45.0% | |
| CAACTTAGCCAGAGATGGAA+TGG | - | chr1.1:8261527-8261546 | MS.gene33174:intron | 45.0% | |
| CACACACGAATACTCATGAC+AGG | - | chr1.1:8262589-8262608 | MS.gene33174:CDS | 45.0% | |
| CACAGCGGAAGACTCTATAT+AGG | + | chr1.1:8263089-8263108 | None:intergenic | 45.0% | |
| CACTGCAAATCACTCATGTC+TGG | + | chr1.1:8262795-8262814 | None:intergenic | 45.0% | |
| CAGCGGAAGACTCTATATAG+GGG | + | chr1.1:8263087-8263106 | None:intergenic | 45.0% | |
| CATCTTCCTTCGTGTTAGTG+TGG | - | chr1.1:8263724-8263743 | MS.gene33174:CDS | 45.0% | |
| CATTCCATCTCTGGCTAAGT+TGG | + | chr1.1:8261529-8261548 | None:intergenic | 45.0% | |
| CTAACACTTAAGGCCTATGC+AGG | + | chr1.1:8262427-8262446 | None:intergenic | 45.0% | |
| CTAGGCGACTCTAGTGAAAA+TGG | - | chr1.1:8264647-8264666 | MS.gene33174:intron | 45.0% | |
| CTTGTGCAGCCATTTAGTCA+AGG | - | chr1.1:8262390-8262409 | MS.gene33174:CDS | 45.0% | |
| GACTAAACTGTGAGTGAGGT+TGG | - | chr1.1:8260748-8260767 | MS.gene33174:intron | 45.0% | |
| GATGACAATTCTGGTATGGG+TGG | - | chr1.1:8260219-8260238 | MS.gene33174:intron | 45.0% | |
| GATTTGCAGTGGCAAGGAAT+GGG | - | chr1.1:8262804-8262823 | MS.gene33174:intron | 45.0% | |
| GTCATGAGTATTCGTGTGTG+AGG | + | chr1.1:8262589-8262608 | None:intergenic | 45.0% | |
| GTTTATGTGACGCACTGAGT+TGG | + | chr1.1:8259424-8259443 | None:intergenic | 45.0% | |
| TACTCAAATTGGTTGGGCTC+GGG | + | chr1.1:8264277-8264296 | None:intergenic | 45.0% | |
| TCACTAGAGTCGCCTAGAAA+AGG | + | chr1.1:8264644-8264663 | None:intergenic | 45.0% | |
| TGATCCATTCCAGAAGGCAA+AGG | + | chr1.1:8260315-8260334 | None:intergenic | 45.0% | |
| TGGGTGTGACTATTCCATGA+AGG | - | chr1.1:8263482-8263501 | MS.gene33174:intron | 45.0% | |
| TGTGCTAGGAGGAACAAAAG+GGG | + | chr1.1:8264224-8264243 | None:intergenic | 45.0% | |
| TTGCCAAGTTCTTTGTCCCA+TGG | + | chr1.1:8263438-8263457 | None:intergenic | 45.0% | |
| TTTACCTACCCCACAACTTG+AGG | - | chr1.1:8261237-8261256 | MS.gene33174:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr1.1:8260934-8260953 | MS.gene33174:intron | 45.0% |
| ! | ATGAGTGATTTGCAGTGGCA+AGG | - | chr1.1:8262798-8262817 | MS.gene33174:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr1.1:8260933-8260952 | MS.gene33174:intron | 45.0% |
| ! | CAGACATGAGTGATTTGCAG+TGG | - | chr1.1:8262793-8262812 | MS.gene33174:intron | 45.0% |
| ! | CTGGTATGGGTGGATTTACT+AGG | - | chr1.1:8260229-8260248 | MS.gene33174:intron | 45.0% |
| ! | TCAACCTTTGCCTTCTGGAA+TGG | - | chr1.1:8260308-8260327 | MS.gene33174:CDS | 45.0% |
| ! | TCTCTGGCTAAGTTGGGTAT+AGG | + | chr1.1:8261522-8261541 | None:intergenic | 45.0% |
| ! | TGATTTGCAGTGGCAAGGAA+TGG | - | chr1.1:8262803-8262822 | MS.gene33174:intron | 45.0% |
| !! | GTACTAGTCTTTGTGCTAGG+AGG | + | chr1.1:8264235-8264254 | None:intergenic | 45.0% |
| !! | TTTGCCTTCTGGAATGGATC+AGG | - | chr1.1:8260314-8260333 | MS.gene33174:CDS | 45.0% |
| !! | GAAAAAAAAAAATATTTATA+TGG | + | chr1.1:8259543-8259562 | None:intergenic | 5.0% |
| !!! | TTTATATATTTATTTTTTCT+GGG | - | chr1.1:8260366-8260385 | MS.gene33174:intron | 5.0% |
| !!! | TTTTATATATTTATTTTTTC+TGG | - | chr1.1:8260365-8260384 | MS.gene33174:intron | 5.0% |
| AAGTACTACCCCGAGGAGAA+TGG | - | chr1.1:8261606-8261625 | MS.gene33174:intron | 50.0% | |
| AATCTGACATTGCCACCACC+TGG | - | chr1.1:8263677-8263696 | MS.gene33174:CDS | 50.0% | |
| ACCTGGTGTTCCAGAAAGTG+TGG | - | chr1.1:8263694-8263713 | MS.gene33174:CDS | 50.0% | |
| AGAAAGGAGGGGGAGTTATG+AGG | - | chr1.1:8263882-8263901 | MS.gene33174:intron | 50.0% | |
| AGCCACTGTACAAATGCCCA+TGG | + | chr1.1:8261348-8261367 | None:intergenic | 50.0% | |
| AGGCGGCTATATGAAAGGGT+TGG | + | chr1.1:8259837-8259856 | None:intergenic | 50.0% | |
| ATGTAGCCAACCCCACTTAG+TGG | + | chr1.1:8260947-8260966 | None:intergenic | 50.0% | |
| CAACCCCACTTAGTGGGATA+AGG | + | chr1.1:8260940-8260959 | None:intergenic | 50.0% | |
| CCAAGTTCTTTGTCCCATGG+TGG | + | chr1.1:8263435-8263454 | None:intergenic | 50.0% | |
| CCACCATGGGACAAAGAACT+TGG | - | chr1.1:8263432-8263451 | MS.gene33174:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr1.1:8260935-8260954 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+TGG | - | chr1.1:8260938-8260957 | MS.gene33174:intron | 50.0% | |
| GACCATGGGCATTTGTACAG+TGG | - | chr1.1:8261343-8261362 | MS.gene33174:intron | 50.0% | |
| GATGGTTTACGTGAAGGACC+AGG | + | chr1.1:8260042-8260061 | None:intergenic | 50.0% | |
| GGTTACAGGTCCATTCTCCT+CGG | + | chr1.1:8261619-8261638 | None:intergenic | 50.0% | |
| GTGCTAGGAGGAACAAAAGG+GGG | + | chr1.1:8264223-8264242 | None:intergenic | 50.0% | |
| GTGGTGAGTGGTGATTCTAG+AGG | - | chr1.1:8262457-8262476 | MS.gene33174:CDS | 50.0% | |
| GTTACAGGTCCATTCTCCTC+GGG | + | chr1.1:8261618-8261637 | None:intergenic | 50.0% | |
| GTTGCTCAACCTTTGCCTTC+TGG | - | chr1.1:8260303-8260322 | MS.gene33174:CDS | 50.0% | |
| TCGTCTGCTCTTCATGGTGT+TGG | - | chr1.1:8262115-8262134 | MS.gene33174:intron | 50.0% | |
| TGTAGCCAACCCCACTTAGT+GGG | + | chr1.1:8260946-8260965 | None:intergenic | 50.0% | |
| TTACAGGTCCATTCTCCTCG+GGG | + | chr1.1:8261617-8261636 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr1.1:8260932-8260951 | MS.gene33174:intron | 50.0% |
| ! | TTGTCCTCAAGTTGTGGGGT+AGG | + | chr1.1:8261244-8261263 | None:intergenic | 50.0% |
| !! | ACACTTTCTGGAACACCAGG+TGG | + | chr1.1:8263695-8263714 | None:intergenic | 50.0% |
| !! | ACCACACTTTCTGGAACACC+AGG | + | chr1.1:8263698-8263717 | None:intergenic | 50.0% |
| !! | GCTAAGAAAGTACTACCCCG+AGG | - | chr1.1:8261599-8261618 | MS.gene33174:intron | 50.0% |
| CAAATTGGTTGGGCTCGGGT+TGG | + | chr1.1:8264273-8264292 | None:intergenic | 55.0% | |
| CTAGGAGGAACAAAAGGGGG+AGG | + | chr1.1:8264220-8264239 | None:intergenic | 55.0% | |
| GCCGTTTCGTCTGCTCTTCA+TGG | - | chr1.1:8262109-8262128 | MS.gene33174:intron | 55.0% | |
| TGCAGCTCCCATTCCATCTC+TGG | + | chr1.1:8261538-8261557 | None:intergenic | 55.0% | |
| !! | CTTTCTGGAACACCAGGTGG+TGG | + | chr1.1:8263692-8263711 | None:intergenic | 55.0% |
| !!! | TTTTTGGGAGGGGGGTGTTC+TGG | - | chr1.1:8263792-8263811 | MS.gene33174:intron | 55.0% |
| !! | ATTGGTTGGGCTCGGGTTGG+TGG | + | chr1.1:8264270-8264289 | None:intergenic | 60.0% |
| !! | GGTTGGGCTCGGGTTGGTGG+CGG | + | chr1.1:8264267-8264286 | None:intergenic | 70.0% |
| !! | GTTGGGCTCGGGTTGGTGGC+GGG | + | chr1.1:8264266-8264285 | None:intergenic | 70.0% |
| !! | TTGGGCTCGGGTTGGTGGCG+GGG | + | chr1.1:8264265-8264284 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 8259267 | 8264689 | 8259267 | ID=MS.gene33174 |
| chr1.1 | mRNA | 8259267 | 8264689 | 8259267 | ID=MS.gene33174.t1;Parent=MS.gene33174 |
| chr1.1 | exon | 8264657 | 8264689 | 8264657 | ID=MS.gene33174.t1.exon1;Parent=MS.gene33174.t1 |
| chr1.1 | CDS | 8264657 | 8264689 | 8264657 | ID=cds.MS.gene33174.t1;Parent=MS.gene33174.t1 |
| chr1.1 | exon | 8263621 | 8263782 | 8263621 | ID=MS.gene33174.t1.exon2;Parent=MS.gene33174.t1 |
| chr1.1 | CDS | 8263621 | 8263782 | 8263621 | ID=cds.MS.gene33174.t1;Parent=MS.gene33174.t1 |
| chr1.1 | exon | 8262565 | 8262632 | 8262565 | ID=MS.gene33174.t1.exon3;Parent=MS.gene33174.t1 |
| chr1.1 | CDS | 8262565 | 8262632 | 8262565 | ID=cds.MS.gene33174.t1;Parent=MS.gene33174.t1 |
| chr1.1 | exon | 8262276 | 8262477 | 8262276 | ID=MS.gene33174.t1.exon4;Parent=MS.gene33174.t1 |
| chr1.1 | CDS | 8262276 | 8262477 | 8262276 | ID=cds.MS.gene33174.t1;Parent=MS.gene33174.t1 |
| chr1.1 | exon | 8261945 | 8262042 | 8261945 | ID=MS.gene33174.t1.exon5;Parent=MS.gene33174.t1 |
| chr1.1 | CDS | 8261945 | 8262042 | 8261945 | ID=cds.MS.gene33174.t1;Parent=MS.gene33174.t1 |
| chr1.1 | exon | 8261788 | 8261857 | 8261788 | ID=MS.gene33174.t1.exon6;Parent=MS.gene33174.t1 |
| chr1.1 | CDS | 8261788 | 8261857 | 8261788 | ID=cds.MS.gene33174.t1;Parent=MS.gene33174.t1 |
| chr1.1 | exon | 8260453 | 8260524 | 8260453 | ID=MS.gene33174.t1.exon7;Parent=MS.gene33174.t1 |
| chr1.1 | CDS | 8260453 | 8260524 | 8260453 | ID=cds.MS.gene33174.t1;Parent=MS.gene33174.t1 |
| chr1.1 | exon | 8260241 | 8260351 | 8260241 | ID=MS.gene33174.t1.exon8;Parent=MS.gene33174.t1 |
| chr1.1 | CDS | 8260241 | 8260351 | 8260241 | ID=cds.MS.gene33174.t1;Parent=MS.gene33174.t1 |
| chr1.1 | exon | 8259267 | 8259305 | 8259267 | ID=MS.gene33174.t1.exon9;Parent=MS.gene33174.t1 |
| chr1.1 | CDS | 8259267 | 8259305 | 8259267 | ID=cds.MS.gene33174.t1;Parent=MS.gene33174.t1 |
| Gene Sequence |
| Protein sequence |
