AlfalfaGEDB | MS.gene057291

M. sativa cultivar XinJiangDaYe / MS.gene057291

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF00036.35 PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057291.t1	XP_019412733.1	79	105	22	0	1	105	1	105	3.60E-29	137.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057291.t1	A2Y609	79.5	78	16	0	1	78	1	78	3.4e-28	125.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057291.t1	M1BCF9	87.0	77	10	0	1	77	1	77	4.4e-29	136.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050381	MS.gene057291	0.821152	4.70E-53	-1.69E-46
MS.gene053319	MS.gene057291	0.838758	2.38E-57	-1.69E-46
MS.gene056310	MS.gene057291	0.814269	1.68E-51	-1.69E-46
MS.gene056313	MS.gene057291	0.829654	4.56E-55	-1.69E-46
MS.gene057291	MS.gene057293	0.948156	1.65E-106	-1.69E-46
MS.gene057291	MS.gene058171	0.812772	3.58E-51	-1.69E-46
MS.gene057291	MS.gene058173	0.803501	3.38E-49	-1.69E-46
MS.gene057291	MS.gene058175	0.808008	3.82E-50	-1.69E-46
MS.gene057291	MS.gene059045	0.812628	3.85E-51	-1.69E-46
MS.gene057291	MS.gene069903	0.823462	1.37E-53	-1.69E-46
MS.gene057291	MS.gene07004	0.830923	2.23E-55	-1.69E-46
MS.gene057291	MS.gene071843	0.810709	1.01E-50	-1.69E-46
MS.gene057291	MS.gene072806	0.812944	3.28E-51	-1.69E-46
MS.gene057291	MS.gene07792	0.84936	3.40E-60	-1.69E-46
MS.gene057291	MS.gene20639	0.833156	6.27E-56	-1.69E-46
MS.gene057291	MS.gene22951	0.804295	2.31E-49	-1.69E-46
MS.gene057291	MS.gene22952	0.81034	1.21E-50	-1.69E-46
MS.gene057291	MS.gene24272	0.827723	1.34E-54	-1.69E-46
MS.gene057291	MS.gene27308	0.829833	4.12E-55	-1.69E-46
MS.gene057291	MS.gene33174	0.809938	1.48E-50	-1.69E-46
MS.gene057291	MS.gene33577	0.811658	6.27E-51	-1.69E-46
MS.gene057291	MS.gene35213	0.801624	8.25E-49	-1.69E-46
MS.gene057291	MS.gene37350	0.840608	7.85E-58	-1.69E-46
MS.gene057291	MS.gene38174	0.805684	1.19E-49	-1.69E-46
MS.gene057291	MS.gene39536	0.801833	7.47E-49	-1.69E-46
MS.gene057291	MS.gene40173	0.807674	4.50E-50	-1.69E-46
MS.gene057291	MS.gene41033	0.807869	4.09E-50	-1.69E-46
MS.gene057291	MS.gene44722	0.808219	3.45E-50	-1.69E-46
MS.gene057291	MS.gene47575	0.814853	1.25E-51	-1.69E-46
MS.gene057291	MS.gene48249	0.802687	4.99E-49	-1.69E-46
MS.gene057291	MS.gene48885	0.802792	4.74E-49	-1.69E-46
MS.gene057291	MS.gene48921	0.800539	1.37E-48	-1.69E-46
MS.gene057291	MS.gene49181	0.801621	8.26E-49	-1.69E-46
MS.gene057291	MS.gene49885	0.807866	4.10E-50	-1.69E-46
MS.gene057291	MS.gene51124	0.805697	1.18E-49	-1.69E-46
MS.gene057291	MS.gene54667	0.831533	1.58E-55	-1.69E-46
MS.gene057291	MS.gene57085	0.824887	6.33E-54	-1.69E-46
MS.gene057291	MS.gene60310	0.805323	1.41E-49	-1.69E-46
MS.gene057291	MS.gene60649	0.806889	6.61E-50	-1.69E-46
MS.gene057291	MS.gene67281	0.813406	2.60E-51	-1.69E-46
MS.gene057291	MS.gene68722	0.800316	1.53E-48	-1.69E-46
MS.gene057291	MS.gene70226	0.80193	7.14E-49	-1.69E-46
MS.gene057291	MS.gene84374	0.803971	2.70E-49	-1.69E-46
MS.gene057291	MS.gene84554	0.807586	4.70E-50	-1.69E-46
MS.gene057291	MS.gene90685	0.835839	1.33E-56	-1.69E-46
MS.gene057291	MS.gene91973	0.812871	3.41E-51	-1.69E-46
MS.gene057291	MS.gene91977	0.803604	3.22E-49	-1.69E-46
MS.gene057291	MS.gene94172	0.80274	4.86E-49	-1.69E-46
MS.gene057291	MS.gene96226	0.804693	1.91E-49	-1.69E-46
MS.gene057291	MS.gene99141	0.810151	1.33E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057291.t1	MTR_1g041285	99.048	105	1	0	1	105	1	105	1.30e-69	205
MS.gene057291.t1	MTR_1g041285	45.161	62	34	0	12	73	85	146	2.09e-11	57.0
MS.gene057291.t1	MTR_1g076650	86.667	105	14	0	1	105	1	105	3.63e-62	186
MS.gene057291.t1	MTR_1g076650	43.548	62	35	0	12	73	85	146	5.90e-12	58.5
MS.gene057291.t1	MTR_6g025320	78.095	105	23	0	1	105	1	105	9.67e-56	170
MS.gene057291.t1	MTR_6g025320	47.692	65	34	0	12	76	85	149	5.55e-13	61.2
MS.gene057291.t1	MTR_5g088320	77.143	105	24	0	1	105	1	105	5.00e-55	168
MS.gene057291.t1	MTR_5g088320	47.692	65	34	0	12	76	85	149	5.67e-13	61.2
MS.gene057291.t1	MTR_7g087610	77.143	105	24	0	1	105	1	105	2.22e-54	166
MS.gene057291.t1	MTR_7g087610	47.692	65	34	0	12	76	85	149	5.31e-13	61.2
MS.gene057291.t1	MTR_7g115040	69.524	105	32	0	1	105	1	105	4.54e-39	127
MS.gene057291.t1	MTR_0168s0120	79.710	69	14	0	37	105	1	69	2.06e-35	117
MS.gene057291.t1	MTR_0168s0120	47.692	65	34	0	12	76	49	113	2.01e-13	61.6
MS.gene057291.t1	MTR_6g025320	79.710	69	14	0	37	105	1	69	2.06e-35	117
MS.gene057291.t1	MTR_6g025320	47.692	65	34	0	12	76	49	113	2.01e-13	61.6
MS.gene057291.t1	MTR_1g071150	54.286	105	47	1	1	105	1	104	2.48e-32	110
MS.gene057291.t1	MTR_1g071150	39.726	73	40	1	1	73	77	145	5.24e-11	56.2
MS.gene057291.t1	MTR_7g074020	47.525	101	53	0	5	105	23	123	2.54e-25	93.2
MS.gene057291.t1	MTR_7g074020	47.525	101	53	0	5	105	23	123	3.41e-25	93.2
MS.gene057291.t1	MTR_5g011850	43.810	105	57	1	1	105	1	103	1.44e-24	90.9
MS.gene057291.t1	MTR_3g055490	56.338	71	31	0	5	75	45	115	5.06e-24	88.6
MS.gene057291.t1	MTR_6g007613	46.809	94	50	0	12	105	29	122	2.16e-23	88.2
MS.gene057291.t1	MTR_6g007613	46.809	94	50	0	12	105	29	122	3.12e-23	88.2
MS.gene057291.t1	MTR_8g066630	40.385	104	59	1	5	105	10	113	5.63e-23	87.4
MS.gene057291.t1	MTR_8g066630	46.552	58	31	0	12	69	93	150	3.42e-11	57.0
MS.gene057291.t1	MTR_1g032070	48.936	94	48	0	12	105	46	139	2.40e-21	84.0
MS.gene057291.t1	MTR_8g105230	46.809	94	50	0	12	105	36	129	5.31e-21	82.8
MS.gene057291.t1	MTR_8g105230	51.515	66	31	1	5	69	101	166	1.51e-14	66.2
MS.gene057291.t1	MTR_8g069915	42.056	107	60	1	1	105	1	107	5.54e-21	82.4
MS.gene057291.t1	MTR_8g069915	38.356	73	42	1	4	76	82	151	2.76e-11	57.0
MS.gene057291.t1	MTR_4g112460	41.000	100	57	1	8	105	7	106	2.67e-20	80.5
MS.gene057291.t1	MTR_4g112460	44.000	75	38	2	2	75	78	149	4.33e-13	62.0
MS.gene057291.t1	MTR_3g055570	45.714	105	42	1	1	105	41	130	4.77e-19	77.4
MS.gene057291.t1	MTR_4g067270	39.362	94	57	0	12	105	5	98	1.37e-17	73.2
MS.gene057291.t1	MTR_4g067270	48.438	64	31	1	12	73	78	141	1.34e-12	60.1
MS.gene057291.t1	MTR_8g099095	37.143	105	65	1	1	105	360	463	1.70e-17	76.6
MS.gene057291.t1	MTR_8g107110	41.489	94	54	1	12	105	24	116	1.70e-17	73.2
MS.gene057291.t1	MTR_8g107110	42.188	64	37	0	10	73	94	157	1.33e-11	57.8
MS.gene057291.t1	MTR_3g055520	43.810	105	44	1	1	105	41	130	3.18e-17	72.8
MS.gene057291.t1	MTR_4g132070	37.143	105	65	1	1	105	385	488	3.19e-17	75.9
MS.gene057291.t1	MTR_5g009830	36.190	105	66	1	1	105	360	463	3.89e-17	75.5
MS.gene057291.t1	MTR_7g090450	40.404	99	55	2	11	105	72	170	4.94e-17	73.2
MS.gene057291.t1	MTR_5g092810	37.143	105	65	1	1	105	386	489	7.60e-17	74.7
MS.gene057291.t1	MTR_4g107490	38.095	105	64	1	1	105	367	470	8.08e-17	74.7
MS.gene057291.t1	MTR_0028s0170	38.095	105	64	1	1	105	372	475	1.65e-16	73.6
MS.gene057291.t1	MTR_7g068710	38.095	105	64	1	1	105	350	453	2.61e-16	73.2
MS.gene057291.t1	MTR_3g055585	42.857	105	45	1	1	105	41	130	3.20e-16	70.1
MS.gene057291.t1	MTR_3g051770	36.190	105	66	1	1	105	377	480	9.53e-16	71.6
MS.gene057291.t1	MTR_1g096490	40.187	107	59	2	1	105	324	427	1.32e-15	71.2
MS.gene057291.t1	MTR_5g079340	38.298	94	57	1	12	105	4	96	1.90e-15	67.4
MS.gene057291.t1	MTR_1g046950	36.458	96	59	1	12	105	4	99	3.47e-15	66.6
MS.gene057291.t1	MTR_6g079570	41.667	96	52	3	12	105	26	119	4.19e-15	67.4
MS.gene057291.t1	MTR_6g079570	39.189	74	45	0	13	86	100	173	6.15e-12	58.9
MS.gene057291.t1	MTR_1g055255	36.190	105	66	1	1	105	418	521	4.43e-15	69.7
MS.gene057291.t1	MTR_1g026190	35.238	105	67	1	1	105	376	479	6.22e-15	69.3
MS.gene057291.t1	MTR_5g089320	35.238	105	67	1	1	105	362	465	1.09e-14	68.6
MS.gene057291.t1	MTR_3g098070	35.238	105	67	1	1	105	323	426	1.60e-14	68.2
MS.gene057291.t1	MTR_3g098090	34.286	105	68	1	1	105	326	429	3.55e-14	67.0
MS.gene057291.t1	MTR_8g095440	35.238	105	67	1	1	105	324	427	4.32e-14	66.6
MS.gene057291.t1	MTR_3g067610	38.947	95	52	2	12	105	5	94	4.34e-14	63.9
MS.gene057291.t1	MTR_4g132040	35.238	105	66	2	1	105	390	492	1.58e-13	65.1
MS.gene057291.t1	MTR_7g106710	35.238	105	67	1	1	105	429	532	1.75e-13	65.1
MS.gene057291.t1	MTR_7g106710	35.238	105	67	1	1	105	429	532	1.75e-13	65.1
MS.gene057291.t1	MTR_1g041150	34.286	105	68	1	1	105	412	515	2.02e-13	65.1
MS.gene057291.t1	MTR_5g099240	33.333	105	69	1	1	105	318	421	2.82e-13	64.3
MS.gene057291.t1	MTR_5g099240	33.333	105	69	1	1	105	390	493	2.97e-13	64.3
MS.gene057291.t1	MTR_7g074240	36.190	105	57	1	11	105	23	127	5.15e-13	62.0
MS.gene057291.t1	MTR_4g066660	35.644	101	64	1	1	101	366	465	6.58e-13	63.5
MS.gene057291.t1	MTR_1g047100	32.632	95	63	1	12	105	4	98	6.88e-13	60.8
MS.gene057291.t1	MTR_1g047100	44.444	63	35	0	12	74	78	140	4.28e-11	56.2
MS.gene057291.t1	MTR_8g078270	38.272	81	49	1	13	93	54	133	1.48e-12	60.8
MS.gene057291.t1	MTR_3g055480	50.000	58	29	0	18	75	51	108	1.56e-12	59.3
MS.gene057291.t1	MTR_4g115170	38.182	110	52	2	12	105	64	173	2.87e-12	60.5
MS.gene057291.t1	MTR_4g115170	52.381	63	28	1	13	73	154	216	1.09e-11	58.9
MS.gene057291.t1	MTR_7g089760	42.553	94	54	0	12	105	5	98	3.20e-12	59.3
MS.gene057291.t1	MTR_3g083470	42.647	68	39	0	6	73	150	217	4.48e-12	60.1
MS.gene057291.t1	MTR_1g054865	33.333	105	69	1	1	105	455	558	5.28e-12	60.8
MS.gene057291.t1	MTR_8g036075	37.624	101	56	2	12	105	49	149	1.33e-11	58.5
MS.gene057291.t1	MTR_7g075040	35.294	102	58	2	12	105	47	148	1.74e-11	58.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057291.t1	AT4G14640	81.188	101	19	0	5	105	6	106	1.38e-56	171
MS.gene057291.t1	AT3G22930	81.188	101	19	0	5	105	28	128	1.75e-56	171
MS.gene057291.t1	AT2G27030	78.095	105	23	0	1	105	1	105	6.38e-56	171
MS.gene057291.t1	AT2G27030	46.269	67	36	0	12	78	85	151	4.54e-13	62.0
MS.gene057291.t1	AT4G14640	81.188	101	19	0	5	105	6	106	7.60e-56	170
MS.gene057291.t1	AT4G14640	45.161	62	34	0	12	73	86	147	2.89e-12	59.3
MS.gene057291.t1	AT5G21274	78.095	105	23	0	1	105	1	105	1.00e-55	170
MS.gene057291.t1	AT5G21274	46.154	65	35	0	12	76	85	149	1.84e-12	60.1
MS.gene057291.t1	AT3G43810	78.095	105	23	0	1	105	1	105	1.01e-55	170
MS.gene057291.t1	AT3G43810	47.692	65	34	0	12	76	85	149	5.81e-13	61.2
MS.gene057291.t1	AT3G56800	78.095	105	23	0	1	105	1	105	1.04e-55	170
MS.gene057291.t1	AT3G56800	47.692	65	34	0	12	76	85	149	6.89e-13	60.8
MS.gene057291.t1	AT2G27030	78.095	105	23	0	1	105	1	105	1.04e-55	170
MS.gene057291.t1	AT2G27030	47.692	65	34	0	12	76	85	149	6.89e-13	60.8
MS.gene057291.t1	AT2G41110	78.095	105	23	0	1	105	1	105	1.04e-55	170
MS.gene057291.t1	AT2G41110	47.692	65	34	0	12	76	85	149	6.89e-13	60.8
MS.gene057291.t1	AT3G22930	81.188	101	19	0	5	105	28	128	1.09e-55	171
MS.gene057291.t1	AT3G22930	45.161	62	34	0	12	73	108	169	2.41e-11	57.4
MS.gene057291.t1	AT3G43810	78.095	105	23	0	1	105	1	105	2.18e-55	171
MS.gene057291.t1	AT3G43810	48.387	62	32	0	12	73	85	146	4.60e-12	60.1
MS.gene057291.t1	AT5G37780	78.095	105	23	0	1	105	1	105	3.20e-55	168
MS.gene057291.t1	AT5G37780	47.692	65	34	0	12	76	85	149	2.22e-13	62.4
MS.gene057291.t1	AT1G66410	78.095	105	23	0	1	105	1	105	3.20e-55	168
MS.gene057291.t1	AT1G66410	47.692	65	34	0	12	76	85	149	2.22e-13	62.4
MS.gene057291.t1	AT2G41110	70.085	117	23	1	1	105	1	117	3.96e-52	161
MS.gene057291.t1	AT2G41110	47.692	65	34	0	12	76	97	161	9.80e-13	60.8
MS.gene057291.t1	AT5G37780	68.333	120	23	1	1	105	1	120	5.88e-51	158
MS.gene057291.t1	AT5G37780	47.692	65	34	0	12	76	100	164	3.69e-13	62.0
MS.gene057291.t1	AT5G37780	62.595	131	23	1	1	105	1	131	2.94e-49	154
MS.gene057291.t1	AT5G37780	47.692	65	34	0	12	76	111	175	4.29e-13	62.0
MS.gene057291.t1	AT1G66410	71.304	115	23	1	1	105	1	115	6.49e-47	148
MS.gene057291.t1	AT1G66410	47.692	65	34	0	12	76	95	159	3.13e-13	62.0
MS.gene057291.t1	AT4G14640	82.500	80	14	0	26	105	9	88	3.57e-44	140
MS.gene057291.t1	AT4G14640	45.161	62	34	0	12	73	68	129	2.21e-12	59.3
MS.gene057291.t1	AT5G37780	80.000	80	16	0	26	105	13	92	2.56e-42	135
MS.gene057291.t1	AT5G37780	47.692	65	34	0	12	76	72	136	2.67e-13	61.6
MS.gene057291.t1	AT1G66410	81.159	69	13	0	37	105	1	69	1.09e-35	118
MS.gene057291.t1	AT1G66410	47.692	65	34	0	12	76	49	113	7.31e-14	62.8
MS.gene057291.t1	AT1G66410	81.159	69	13	0	37	105	1	69	1.09e-35	118
MS.gene057291.t1	AT1G66410	47.692	65	34	0	12	76	49	113	7.31e-14	62.8
MS.gene057291.t1	AT3G43810	79.710	69	14	0	37	105	1	69	2.16e-35	117
MS.gene057291.t1	AT3G43810	47.692	65	34	0	12	76	49	113	2.11e-13	61.6
MS.gene057291.t1	AT3G43810	79.710	69	14	0	37	105	1	69	2.16e-35	117
MS.gene057291.t1	AT3G43810	47.692	65	34	0	12	76	49	113	2.11e-13	61.6
MS.gene057291.t1	AT2G41090	53.333	105	46	1	1	105	1	102	4.45e-30	106
MS.gene057291.t1	AT2G41100	50.000	122	44	2	1	105	55	176	4.76e-30	108
MS.gene057291.t1	AT2G41100	52.688	93	41	1	5	97	149	238	2.29e-25	96.3
MS.gene057291.t1	AT2G41100	38.372	86	37	2	36	105	1	86	6.89e-12	60.1
MS.gene057291.t1	AT2G41100	50.000	122	44	2	1	105	55	176	4.76e-30	108
MS.gene057291.t1	AT2G41100	52.688	93	41	1	5	97	149	238	2.29e-25	96.3
MS.gene057291.t1	AT2G41100	38.372	86	37	2	36	105	1	86	6.89e-12	60.1
MS.gene057291.t1	AT2G41100	50.000	122	44	2	1	105	55	176	4.76e-30	108
MS.gene057291.t1	AT2G41100	52.688	93	41	1	5	97	149	238	2.29e-25	96.3
MS.gene057291.t1	AT2G41100	38.372	86	37	2	36	105	1	86	6.89e-12	60.1
MS.gene057291.t1	AT2G41100	50.000	122	44	2	1	105	90	211	9.80e-30	108
MS.gene057291.t1	AT2G41100	44.628	121	51	2	1	105	1	121	2.10e-27	102
MS.gene057291.t1	AT2G41100	52.688	93	41	1	5	97	184	273	4.30e-25	96.3
MS.gene057291.t1	AT2G41100	50.000	122	44	2	1	105	90	211	9.80e-30	108
MS.gene057291.t1	AT2G41100	44.628	121	51	2	1	105	1	121	2.10e-27	102
MS.gene057291.t1	AT2G41100	52.688	93	41	1	5	97	184	273	4.30e-25	96.3
MS.gene057291.t1	AT2G41100	52.577	97	43	1	1	97	1	94	3.45e-28	100
MS.gene057291.t1	AT3G51920	46.667	105	56	0	1	105	1	105	2.08e-26	95.9
MS.gene057291.t1	AT2G41100	52.688	93	41	1	5	97	59	148	2.92e-26	96.7
MS.gene057291.t1	AT2G41100	46.429	84	28	2	39	105	3	86	1.54e-14	66.2
MS.gene057291.t1	AT3G50360	49.451	91	46	0	12	102	27	117	2.38e-23	88.6
MS.gene057291.t1	AT1G62820	42.574	101	56	1	5	105	6	104	1.54e-22	85.9
MS.gene057291.t1	AT1G12310	41.584	101	57	1	5	105	6	104	3.71e-22	84.7
MS.gene057291.t1	AT1G18530	40.594	101	58	1	7	105	2	102	2.69e-20	80.5
MS.gene057291.t1	AT1G18530	43.836	73	38	1	4	76	77	146	2.59e-13	62.4
MS.gene057291.t1	AT1G24620	45.361	97	53	0	9	105	34	130	5.13e-20	80.5
MS.gene057291.t1	AT1G24620	46.269	67	36	0	8	74	106	172	4.25e-12	59.7
MS.gene057291.t1	AT1G32250	36.449	107	62	2	5	105	9	115	1.92e-19	78.2
MS.gene057291.t1	AT1G66400	44.792	96	51	1	12	105	15	110	3.86e-19	77.4
MS.gene057291.t1	AT1G66400	41.176	68	40	0	6	73	84	151	1.50e-12	60.5
MS.gene057291.t1	AT3G25600	38.318	107	64	1	1	105	1	107	1.15e-18	76.3
MS.gene057291.t1	AT3G25600	41.096	73	40	1	4	76	82	151	5.52e-13	61.6
MS.gene057291.t1	AT4G37010	41.489	94	55	0	12	105	31	124	2.64e-18	75.5
MS.gene057291.t1	AT4G37010	41.489	94	55	0	12	105	27	120	2.76e-18	75.5
MS.gene057291.t1	AT5G37770	43.878	98	51	1	12	105	17	114	1.67e-17	73.2
MS.gene057291.t1	AT5G37770	38.462	65	40	0	10	74	92	156	1.50e-11	57.8
MS.gene057291.t1	AT5G37770	43.878	98	51	1	12	105	17	114	1.67e-17	73.2
MS.gene057291.t1	AT5G37770	38.462	65	40	0	10	74	92	156	1.50e-11	57.8
MS.gene057291.t1	AT4G04720	39.048	105	63	1	1	105	373	476	2.33e-17	76.3
MS.gene057291.t1	AT4G04720	39.048	105	63	1	1	105	373	476	2.33e-17	76.3
MS.gene057291.t1	AT3G10190	39.623	106	62	2	1	105	59	163	3.43e-17	73.6
MS.gene057291.t1	AT4G21940	38.095	105	64	1	1	105	395	498	6.97e-17	74.7
MS.gene057291.t1	AT4G21940	38.095	105	64	1	1	105	395	498	7.40e-17	74.7
MS.gene057291.t1	AT5G19360	39.048	105	63	1	1	105	362	465	1.60e-16	73.9
MS.gene057291.t1	AT5G12180	39.048	105	63	1	1	105	367	470	1.71e-16	73.6
MS.gene057291.t1	AT3G51850	37.143	105	65	1	1	105	348	451	1.76e-16	73.6
MS.gene057291.t1	AT3G51850	37.143	105	65	1	1	105	348	451	1.91e-16	73.6
MS.gene057291.t1	AT4G23650	35.238	105	67	1	1	105	372	475	2.23e-16	73.6
MS.gene057291.t1	AT3G03000	39.216	102	61	1	5	105	13	114	3.16e-16	70.1
MS.gene057291.t1	AT3G03000	47.458	59	31	0	12	70	94	152	3.64e-11	57.0
MS.gene057291.t1	AT2G43290	39.394	99	55	1	12	105	65	163	4.86e-16	70.5
MS.gene057291.t1	AT2G43290	50.000	64	30	1	12	73	143	206	2.78e-13	63.2
MS.gene057291.t1	AT1G76040	36.190	105	66	1	1	105	167	270	1.10e-15	70.9
MS.gene057291.t1	AT1G76040	36.190	105	66	1	1	105	167	270	1.10e-15	70.9
MS.gene057291.t1	AT3G20410	35.238	105	67	1	1	105	385	488	1.11e-15	71.2
MS.gene057291.t1	AT3G20410	35.238	105	67	1	1	105	385	488	1.11e-15	71.2
MS.gene057291.t1	AT1G05990	41.667	96	55	1	11	105	4	99	1.12e-15	68.2
MS.gene057291.t1	AT1G05990	46.032	63	32	1	13	73	80	142	6.72e-12	58.5
MS.gene057291.t1	AT1G76040	36.190	105	66	1	1	105	405	508	1.25e-15	71.2
MS.gene057291.t1	AT4G21940	38.384	99	60	1	1	99	395	492	1.27e-15	71.2
MS.gene057291.t1	AT1G73630	38.947	95	54	1	11	105	19	109	1.34e-15	68.2
MS.gene057291.t1	AT4G04740	36.634	101	63	1	5	105	366	465	1.40e-15	71.2
MS.gene057291.t1	AT1G18210	39.362	94	53	1	12	105	23	112	1.63e-15	68.2
MS.gene057291.t1	AT1G18210	39.362	94	53	1	12	105	23	112	1.63e-15	68.2
MS.gene057291.t1	AT5G23580	39.048	105	63	1	1	105	316	419	1.83e-15	70.9
MS.gene057291.t1	AT1G61950	34.286	105	68	1	1	105	393	496	2.75e-15	70.5
MS.gene057291.t1	AT1G50700	34.286	105	68	1	1	105	367	470	2.79e-15	70.1
MS.gene057291.t1	AT4G04710	36.190	105	66	1	1	105	326	429	4.27e-15	69.7
MS.gene057291.t1	AT4G04700	38.095	105	64	1	1	105	325	428	4.53e-15	69.7
MS.gene057291.t1	AT4G04710	36.190	105	66	1	1	105	312	415	4.68e-15	69.7
MS.gene057291.t1	AT4G04710	36.190	105	66	1	1	105	339	442	4.92e-15	69.7
MS.gene057291.t1	AT1G76040	35.644	101	64	1	1	101	405	504	5.43e-15	69.3
MS.gene057291.t1	AT4G04695	36.190	105	66	1	1	105	325	428	5.89e-15	69.3
MS.gene057291.t1	AT1G35670	37.143	105	65	1	1	105	320	423	1.25e-14	68.6
MS.gene057291.t1	AT4G04740	36.634	101	63	1	5	105	366	465	1.27e-14	68.6
MS.gene057291.t1	AT4G04740	36.634	101	63	1	5	105	366	465	1.27e-14	68.6
MS.gene057291.t1	AT4G04740	36.634	101	63	1	5	105	366	465	1.27e-14	68.6
MS.gene057291.t1	AT4G04740	36.634	101	63	1	5	105	366	465	1.27e-14	68.6
MS.gene057291.t1	AT4G04740	36.634	101	63	1	5	105	366	465	1.27e-14	68.6
MS.gene057291.t1	AT4G04740	36.634	101	63	1	5	105	366	465	1.27e-14	68.6
MS.gene057291.t1	AT3G59440	37.895	95	58	1	11	105	50	143	2.23e-14	65.9
MS.gene057291.t1	AT3G59440	45.946	74	38	1	2	73	113	186	9.33e-13	61.6
MS.gene057291.t1	AT4G03290	49.231	65	31	1	13	75	82	146	3.86e-14	64.3
MS.gene057291.t1	AT4G03290	37.113	97	58	1	12	105	5	101	3.56e-13	62.0
MS.gene057291.t1	AT4G09570	38.318	107	61	2	1	105	319	422	4.23e-14	67.0
MS.gene057291.t1	AT3G50770	40.230	87	48	1	12	94	64	150	6.03e-14	64.7
MS.gene057291.t1	AT4G04710	36.449	107	65	2	1	105	339	444	7.22e-14	66.2
MS.gene057291.t1	AT5G04870	35.238	105	67	1	1	105	444	547	8.28e-14	66.2
MS.gene057291.t1	AT4G38230	34.286	105	68	1	1	105	174	277	1.59e-13	65.1
MS.gene057291.t1	AT4G38230	34.286	105	68	1	1	105	348	451	1.77e-13	65.1
MS.gene057291.t1	AT4G38230	34.286	105	68	1	1	105	318	421	2.02e-13	65.1
MS.gene057291.t1	AT4G38230	34.286	105	68	1	1	105	318	421	2.02e-13	65.1
MS.gene057291.t1	AT2G41410	37.000	100	61	2	8	105	66	165	3.58e-13	63.2
MS.gene057291.t1	AT3G10660	33.333	105	69	1	1	105	480	583	3.80e-13	64.3
MS.gene057291.t1	AT3G10660	33.333	105	69	1	1	105	480	583	3.80e-13	64.3
MS.gene057291.t1	AT1G50700	33.333	99	65	1	1	99	367	464	4.30e-13	63.9
MS.gene057291.t1	AT5G12480	35.644	101	64	1	1	101	259	358	4.37e-13	63.9
MS.gene057291.t1	AT5G12480	35.644	101	64	1	1	101	353	452	5.45e-13	63.9
MS.gene057291.t1	AT4G35310	32.381	105	70	1	1	105	391	494	7.19e-13	63.5
MS.gene057291.t1	AT4G35310	32.381	105	70	1	1	105	391	494	7.19e-13	63.5
MS.gene057291.t1	AT5G17470	37.113	97	59	1	11	105	1	97	9.96e-13	60.5
MS.gene057291.t1	AT5G17470	42.647	68	39	0	7	74	72	139	1.29e-11	57.8
MS.gene057291.t1	AT2G17290	32.381	105	70	1	1	105	379	482	1.36e-12	62.8
MS.gene057291.t1	AT2G17290	32.381	105	70	1	1	105	379	482	1.36e-12	62.8
MS.gene057291.t1	AT1G74740	32.381	105	70	1	1	105	353	456	1.44e-12	62.4
MS.gene057291.t1	AT2G31500	34.653	101	65	1	1	101	360	459	2.00e-12	62.0
MS.gene057291.t1	AT2G15680	34.653	101	64	1	5	105	43	141	2.83e-12	60.1
MS.gene057291.t1	AT2G38910	33.333	105	69	1	1	105	428	531	3.63e-12	61.2
MS.gene057291.t1	AT2G36180	41.667	96	53	2	13	105	1	96	6.01e-12	58.5
MS.gene057291.t1	AT5G19450	35.294	102	64	2	1	101	351	451	1.88e-11	59.3
MS.gene057291.t1	AT5G19450	35.294	102	64	2	1	101	351	451	1.88e-11	59.3
MS.gene057291.t1	AT1G18890	35.644	101	64	1	1	101	357	456	3.48e-11	58.5
MS.gene057291.t1	AT4G12860	37.363	91	57	0	12	102	5	95	7.13e-11	55.8
MS.gene057291.t1	AT1G50700	28.244	131	67	2	1	105	367	496	7.80e-11	57.8

Find 20 sgRNAs with CRISPR-Local

Find 33 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTTGAGTTCTTGAACTTAA+TGG	0.156792	1.4:+25640243	MS.gene057291:CDS
CAACCTCGTTTATCATTTCT+TGG	0.231199	1.4:-25640192	None:intergenic
CTTCTTTGATCTCAACAATT+TGG	0.239416	1.4:-25639861	None:intergenic
CTTGGAGCTCTTCCTCTGTT+GGG	0.341743	1.4:-25640174	None:intergenic
TCTTGGAGCTCTTCCTCTGT+TGG	0.366378	1.4:-25640175	None:intergenic
TGCAACTGTAATTAGGTCAT+TGG	0.376466	1.4:+25640144	MS.gene057291:CDS
AGATCTCAAAGAGGCTTTCA+AGG	0.399505	1.4:+25640396	MS.gene057291:CDS
TTTAGCTTGTTTGACAAAGA+TGG	0.404110	1.4:+25639886	MS.gene057291:CDS
AAGAACTTGCAACTGTAATT+AGG	0.411307	1.4:+25640137	MS.gene057291:CDS
GAGGTTGATGCAGATGGAAA+TGG	0.427391	1.4:+25640208	MS.gene057291:CDS
CAAGAACTCAACAAATTCAA+TGG	0.441259	1.4:-25640233	None:intergenic
ATCTTTGTCAAACAAGCTAA+AGG	0.492900	1.4:-25639884	None:intergenic
ATAAACGAGGTTGATGCAGA+TGG	0.548616	1.4:+25640202	MS.gene057291:CDS
TTGTTTGACAAAGATGGAGA+TGG	0.580494	1.4:+25639892	MS.gene057291:CDS
TGGTTATATTTCCGCTAGTG+AGG	0.592900	1.4:+25640438	MS.gene057291:CDS
TTTAATAGGCTGCATTACTG+TGG	0.604938	1.4:+25640114	MS.gene057291:intron
TGCAGATGAAGATCTCAAAG+AGG	0.636781	1.4:+25640387	MS.gene057291:CDS
ATATTTATATACCTCACTAG+CGG	0.685027	1.4:-25640449	None:intergenic
ATTGGATCAAAACCCAACAG+AGG	0.719116	1.4:+25640162	MS.gene057291:CDS
GCTCCAAGAAATGATAAACG+AGG	0.724641	1.4:+25640189	MS.gene057291:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATATAATTGAAATGAAATA+TGG	-	chr1.4:25639953-25639972	None:intergenic	10.0%
!!	TTCAAAAATATTATAGTATT+AGG	-	chr1.4:25640052-25640071	None:intergenic	10.0%
!!	CACATTAATATTATAGTATA+AGG	-	chr1.4:25640079-25640098	None:intergenic	15.0%
!!!	AATAATTACTTTCATTTTCT+TGG	-	chr1.4:25640269-25640288	None:intergenic	15.0%
!!	ACATTATTGTAAGAAATGAA+AGG	-	chr1.4:25640298-25640317	None:intergenic	20.0%
!!	CATTATTGTAAGAAATGAAA+GGG	-	chr1.4:25640297-25640316	None:intergenic	20.0%
!!	CTTCTTGATTAATCTTTAAT+AGG	+	chr1.4:25640100-25640119	MS.gene057291:intron	20.0%
!!!	GTTTTTGATAAAGATCAAAA+TGG	+	chr1.4:25640418-25640437	MS.gene057291:CDS	20.0%
!	TGAAGCATGATGATAAATAT+TGG	-	chr1.4:25640002-25640021	None:intergenic	25.0%
	AAGAACTTGCAACTGTAATT+AGG	+	chr1.4:25640137-25640156	MS.gene057291:CDS	30.0%
	ATATTGGCAACAAACAAAGA+AGG	-	chr1.4:25639986-25640005	None:intergenic	30.0%
	ATCTTTGTCAAACAAGCTAA+AGG	-	chr1.4:25639887-25639906	None:intergenic	30.0%
	CAAGAACTCAACAAATTCAA+TGG	-	chr1.4:25640236-25640255	None:intergenic	30.0%
	CTTCTTTGATCTCAACAATT+TGG	-	chr1.4:25639864-25639883	None:intergenic	30.0%
	TGTTGAGTTCTTGAACTTAA+TGG	+	chr1.4:25640243-25640262	MS.gene057291:CDS	30.0%
!!	TTTAGCTTGTTTGACAAAGA+TGG	+	chr1.4:25639886-25639905	MS.gene057291:CDS	30.0%
	CAACCTCGTTTATCATTTCT+TGG	-	chr1.4:25640195-25640214	None:intergenic	35.0%
	TGCAACTGTAATTAGGTCAT+TGG	+	chr1.4:25640144-25640163	MS.gene057291:CDS	35.0%
	TGCATCAGTTTCCTAAATGA+GGG	-	chr1.4:25640371-25640390	None:intergenic	35.0%
	TTGTTTGACAAAGATGGAGA+TGG	+	chr1.4:25639892-25639911	MS.gene057291:CDS	35.0%
	TTTAATAGGCTGCATTACTG+TGG	+	chr1.4:25640114-25640133	MS.gene057291:intron	35.0%
!!!	CTATTTTTTCCCCCTCATTT+AGG	+	chr1.4:25640357-25640376	MS.gene057291:intron	35.0%
	AGATCTCAAAGAGGCTTTCA+AGG	+	chr1.4:25640396-25640415	MS.gene057291:CDS	40.0%
	ATTGGATCAAAACCCAACAG+AGG	+	chr1.4:25640162-25640181	MS.gene057291:CDS	40.0%
	CATCAGTTTCCTAAATGAGG+GGG	-	chr1.4:25640369-25640388	None:intergenic	40.0%
	CTGCATCAGTTTCCTAAATG+AGG	-	chr1.4:25640372-25640391	None:intergenic	40.0%
	GCATCAGTTTCCTAAATGAG+GGG	-	chr1.4:25640370-25640389	None:intergenic	40.0%
	GCTCCAAGAAATGATAAACG+AGG	+	chr1.4:25640189-25640208	MS.gene057291:CDS	40.0%
	TGCAGATGAAGATCTCAAAG+AGG	+	chr1.4:25640387-25640406	MS.gene057291:CDS	40.0%
!!	ATAAACGAGGTTGATGCAGA+TGG	+	chr1.4:25640202-25640221	MS.gene057291:CDS	40.0%
!!	GAGGTTGATGCAGATGGAAA+TGG	+	chr1.4:25640208-25640227	MS.gene057291:CDS	45.0%
	CTTGGAGCTCTTCCTCTGTT+GGG	-	chr1.4:25640177-25640196	None:intergenic	50.0%
	TCTTGGAGCTCTTCCTCTGT+TGG	-	chr1.4:25640178-25640197	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	25639838	25640459	25639838	ID=MS.gene057291
chr1.4	mRNA	25639838	25640459	25639838	ID=MS.gene057291.t1;Parent=MS.gene057291
chr1.4	exon	25639838	25639913	25639838	ID=MS.gene057291.t1.exon1;Parent=MS.gene057291.t1
chr1.4	CDS	25639838	25639913	25639838	ID=cds.MS.gene057291.t1;Parent=MS.gene057291.t1
chr1.4	exon	25640122	25640279	25640122	ID=MS.gene057291.t1.exon2;Parent=MS.gene057291.t1
chr1.4	CDS	25640122	25640279	25640122	ID=cds.MS.gene057291.t1;Parent=MS.gene057291.t1
chr1.4	exon	25640379	25640459	25640379	ID=MS.gene057291.t1.exon3;Parent=MS.gene057291.t1
chr1.4	CDS	25640379	25640459	25640379	ID=cds.MS.gene057291.t1;Parent=MS.gene057291.t1

Gene Sequence

>MS.gene057291

ATGGCAGAAATTTTGAATGAAGACCAAATTGTTGAGATCAAAGAAGCCTTTAGCTTGTTTGACAAAGATGGAGATGGTAAGCAAAAAAATTTATATCATTTTTACAATATCACCATATTTCATTTCAATTATATAAATTTATAATCCTTCTTTGTTTGTTGCCAATATTTATCATCATGCTTCAATTATTTTCACAAATATAATGTTCTTACCTAATACTATAATATTTTTGAAGAAACCTTATACTATAATATTAATGTGTCTTCTTGATTAATCTTTAATAGGCTGCATTACTGTGGAAGAACTTGCAACTGTAATTAGGTCATTGGATCAAAACCCAACAGAGGAAGAGCTCCAAGAAATGATAAACGAGGTTGATGCAGATGGAAATGGAACCATTGAATTTGTTGAGTTCTTGAACTTAATGGCCAAGAAAATGAAAGTAATTATTCTCAACCCTTTCATTTCTTACAATAATGTTTTTTTTTTTTTTTATAGTTCTCTTAGTCTCATTCAGCTCTATTTTTTCCCCCTCATTTAGGAAACTGATGCAGATGAAGATCTCAAAGAGGCTTTCAAGGTTTTTGATAAAGATCAAAATGGTTATATTTCCGCTAGTGAG

Protein sequence

>MS.gene057291.t1

MAEILNEDQIVEIKEAFSLFDKDGDGCITVEELATVIRSLDQNPTEEELQEMINEVDADGNGTIEFVEFLNLMAKKMKETDADEDLKEAFKVFDKDQNGYISASE