Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34975.t1 | RHN42316.1 | 88.9 | 406 | 44 | 1 | 1 | 405 | 81 | 486 | 8.30E-151 | 543.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34975.t1 | Q9M647 | 67.1 | 407 | 113 | 5 | 1 | 405 | 82 | 469 | 1.4e-98 | 361.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34975.t1 | A0A396GMG8 | 88.9 | 406 | 44 | 1 | 1 | 405 | 81 | 486 | 6.0e-151 | 543.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene34975 | 0.806163 | 9.40E-50 | -1.69E-46 |
| MS.gene049341 | MS.gene34975 | 0.801584 | 8.40E-49 | -1.69E-46 |
| MS.gene049824 | MS.gene34975 | 0.845158 | 4.84E-59 | -1.69E-46 |
| MS.gene049825 | MS.gene34975 | 0.839109 | 1.93E-57 | -1.69E-46 |
| MS.gene049873 | MS.gene34975 | 0.837712 | 4.42E-57 | -1.69E-46 |
| MS.gene050237 | MS.gene34975 | 0.805689 | 1.18E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene34975 | 0.803347 | 3.64E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene34975 | 0.800348 | 1.50E-48 | -1.69E-46 |
| MS.gene050807 | MS.gene34975 | 0.837249 | 5.81E-57 | -1.69E-46 |
| MS.gene050808 | MS.gene34975 | 0.82376 | 1.16E-53 | -1.69E-46 |
| MS.gene051719 | MS.gene34975 | 0.831924 | 1.27E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene34975 | 0.818095 | 2.34E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene34975 | 0.807851 | 4.13E-50 | -1.69E-46 |
| MS.gene052133 | MS.gene34975 | 0.828126 | 1.07E-54 | -1.69E-46 |
| MS.gene052239 | MS.gene34975 | -0.813746 | 2.19E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene34975 | 0.817857 | 2.65E-52 | -1.69E-46 |
| MS.gene052879 | MS.gene34975 | 0.803301 | 3.72E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene34975 | 0.823128 | 1.64E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene34975 | 0.811564 | 6.57E-51 | -1.69E-46 |
| MS.gene053599 | MS.gene34975 | 0.824093 | 9.73E-54 | -1.69E-46 |
| MS.gene053678 | MS.gene34975 | 0.821435 | 4.04E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene34975 | 0.820111 | 8.15E-53 | -1.69E-46 |
| MS.gene055512 | MS.gene34975 | 0.821005 | 5.08E-53 | -1.69E-46 |
| MS.gene055580 | MS.gene34975 | -0.808414 | 3.13E-50 | -1.69E-46 |
| MS.gene055808 | MS.gene34975 | 0.821179 | 4.63E-53 | -1.69E-46 |
| MS.gene057060 | MS.gene34975 | 0.815503 | 8.94E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene34975 | 0.810724 | 1.00E-50 | -1.69E-46 |
| MS.gene057705 | MS.gene34975 | 0.800051 | 1.73E-48 | -1.69E-46 |
| MS.gene058625 | MS.gene34975 | 0.815619 | 8.43E-52 | -1.69E-46 |
| MS.gene058635 | MS.gene34975 | 0.817395 | 3.37E-52 | -1.69E-46 |
| MS.gene058852 | MS.gene34975 | 0.808635 | 2.81E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene34975 | 0.822894 | 1.86E-53 | -1.69E-46 |
| MS.gene060429 | MS.gene34975 | 0.80748 | 4.95E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene34975 | 0.826081 | 3.30E-54 | -1.69E-46 |
| MS.gene060619 | MS.gene34975 | 0.80394 | 2.74E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34975.t1 | AT1G68100 | 63.235 | 408 | 127 | 9 | 1 | 405 | 82 | 469 | 4.26e-159 | 456 |
| MS.gene34975.t1 | AT1G68100 | 62.465 | 357 | 111 | 9 | 1 | 354 | 82 | 418 | 1.19e-130 | 382 |
Find 91 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAGTGCATTCATTCTTTA+TGG | 0.128139 | 4.4:+18004618 | MS.gene34975:CDS |
| TGCATACAGGTTGGTGATTT+TGG | 0.131631 | 4.4:+18006110 | MS.gene34975:intron |
| GTTGATTCATTGGCTTTATT+TGG | 0.140275 | 4.4:+18001900 | MS.gene34975:CDS |
| TTGATTCATTGGCTTTATTT+GGG | 0.206144 | 4.4:+18001901 | MS.gene34975:CDS |
| ATATTTGACATTTAGGTCTT+TGG | 0.237351 | 4.4:+18001665 | MS.gene34975:intron |
| CATGGCCATGATGATAATTC+TGG | 0.335638 | 4.4:+18003175 | MS.gene34975:CDS |
| AAAGGCTGTTGTTGATTCAT+TGG | 0.343628 | 4.4:+18001890 | MS.gene34975:CDS |
| CACCAACTACCGCATGCTTT+TGG | 0.343649 | 4.4:+18002209 | MS.gene34975:CDS |
| TTTCAGGCAGGAGCTATGTT+GGG | 0.345216 | 4.4:+18002173 | MS.gene34975:intron |
| TCTGCACTCGTGGCACTTGC+AGG | 0.347304 | 4.4:+18006188 | MS.gene34975:CDS |
| GAATCAACAACAGCCTTTGA+TGG | 0.351301 | 4.4:-18001885 | None:intergenic |
| TCTACTGAACTATCGGGTTT+AGG | 0.355559 | 4.4:+18001241 | MS.gene34975:CDS |
| AAATTACAGGCAGGATAATC+AGG | 0.370708 | 4.4:-18001738 | None:intergenic |
| TTTATATACATCGCCATTGC+AGG | 0.389892 | 4.4:+18006843 | MS.gene34975:CDS |
| TTCACTGATGGAATTGCATT+AGG | 0.390135 | 4.4:+18004597 | MS.gene34975:CDS |
| AATTGTACTCTTTCTTCTTG+TGG | 0.396907 | 4.4:+18003715 | MS.gene34975:CDS |
| ATCATTCTGACTACTACCTT+TGG | 0.410847 | 4.4:-18004377 | None:intergenic |
| GAGCATTCCTCACCTCAATC+AGG | 0.413368 | 4.4:-18006739 | None:intergenic |
| TACTGCCTCTACTGAACTAT+CGG | 0.426313 | 4.4:+18001234 | MS.gene34975:CDS |
| TTTATGGATCTGTTGGTGGC+TGG | 0.428280 | 4.4:+18004634 | MS.gene34975:CDS |
| GAGGAAGATATGAAACTCTA+TGG | 0.429877 | 4.4:+18001178 | None:intergenic |
| AAGTTGAAGAACAAAGCTTT+TGG | 0.434106 | 4.4:-18006161 | None:intergenic |
| TTCATTCTTTATGGATCTGT+TGG | 0.436706 | 4.4:+18004627 | MS.gene34975:CDS |
| TCTACAGGAATGTCTGTCCT+AGG | 0.440185 | 4.4:+18003229 | MS.gene34975:CDS |
| CCAAACACAAGACTGCTTGC+TGG | 0.440776 | 4.4:-18004460 | None:intergenic |
| CCAGCAAGCAGTCTTGTGTT+TGG | 0.441867 | 4.4:+18004460 | MS.gene34975:CDS |
| TTTGGTATAGGCTCTACTCT+GGG | 0.450056 | 4.4:+18006694 | MS.gene34975:intron |
| ATTCTTTATGGATCTGTTGG+TGG | 0.455219 | 4.4:+18004630 | MS.gene34975:CDS |
| TCTTTAGCTGATCTTTCTAC+AGG | 0.456421 | 4.4:+18003214 | MS.gene34975:CDS |
| TTCAGGCAGGAGCTATGTTG+GGG | 0.468392 | 4.4:+18002174 | MS.gene34975:intron |
| TGCTATTGTGGTTATGGTGG+TGG | 0.468440 | 4.4:-18003799 | None:intergenic |
| GATATGAAACTCTATGGCTT+CGG | 0.473249 | 4.4:+18001184 | None:intergenic |
| GGTCTTTGGTTGAATGCGTT+GGG | 0.474628 | 4.4:+18001679 | MS.gene34975:intron |
| TCAAATAATCTCACTGACAA+TGG | 0.476796 | 4.4:+18006920 | MS.gene34975:CDS |
| AGGTCTTTGGTTGAATGCGT+TGG | 0.479620 | 4.4:+18001678 | MS.gene34975:intron |
| CAAATAATCTCACTGACAAT+GGG | 0.483818 | 4.4:+18006921 | MS.gene34975:CDS |
| ATCTAAATCCTCGCTTAGAA+AGG | 0.488010 | 4.4:+18003964 | MS.gene34975:CDS |
| TGCATGGTCACCATGAGAAT+GGG | 0.491097 | 4.4:-18003149 | None:intergenic |
| AGCGAGGATTTAGATTGAGC+TGG | 0.491576 | 4.4:-18003956 | None:intergenic |
| AGACTGCTTGCTGGTCTAGC+TGG | 0.494277 | 4.4:-18004451 | None:intergenic |
| TTGCAGCATAATTTCACTGA+TGG | 0.495442 | 4.4:+18004585 | MS.gene34975:intron |
| CTGTTCGTTTCTAGTGAGCA+TGG | 0.501675 | 4.4:+18001702 | MS.gene34975:CDS |
| TACCAAAAGCATGCGGTAGT+TGG | 0.508827 | 4.4:-18002211 | None:intergenic |
| CTGCATGGTCACCATGAGAA+TGG | 0.509145 | 4.4:-18003150 | None:intergenic |
| TCAATCAGGGATGACTGTCC+AGG | 0.514548 | 4.4:-18006725 | None:intergenic |
| ATTCACCTGTTTCAGTTCAA+GGG | 0.517071 | 4.4:+18001859 | MS.gene34975:intron |
| ACTGCCTCTACTGAACTATC+GGG | 0.518695 | 4.4:+18001235 | MS.gene34975:CDS |
| CTCTGCAAGCACTCCTGCAA+TGG | 0.521107 | 4.4:-18006856 | None:intergenic |
| CAGGATAATCAGGCAAATCA+AGG | 0.522978 | 4.4:-18001728 | None:intergenic |
| GGCACTTGCAGGCACTGCAT+TGG | 0.532446 | 4.4:+18006199 | MS.gene34975:CDS |
| TGATTCATTGGCTTTATTTG+GGG | 0.541640 | 4.4:+18001902 | MS.gene34975:CDS |
| CATCATGGCCATGGTCTGCA+TGG | 0.544860 | 4.4:-18003165 | None:intergenic |
| TAGAGGCAGTAAAGTGATGA+TGG | 0.549323 | 4.4:-18001222 | None:intergenic |
| TTGCAGAGATGAATAACAAT+GGG | 0.553416 | 4.4:+18006871 | MS.gene34975:CDS |
| TTGGTATAGGCTCTACTCTG+GGG | 0.554436 | 4.4:+18006695 | MS.gene34975:intron |
| CAGAATTATCATCATGGCCA+TGG | 0.554882 | 4.4:-18003174 | None:intergenic |
| ATTCTTGTGTTGCAGAGAAG+TGG | 0.560445 | 4.4:+18004343 | MS.gene34975:intron |
| AATCTCACTGACAATGGGAA+TGG | 0.560544 | 4.4:+18006926 | MS.gene34975:CDS |
| TGGACAGTCATCCCTGATTG+AGG | 0.566660 | 4.4:+18006727 | MS.gene34975:CDS |
| TCAGGAGGAGCCAACTCGTG+GGG | 0.571716 | 4.4:+18003767 | MS.gene34975:CDS |
| TAAAGTGATGATGGTCGTGA+TGG | 0.572558 | 4.4:-18001213 | None:intergenic |
| TGAAGATTTGACATTATCAG+TGG | 0.572617 | 4.4:-18004416 | None:intergenic |
| GGCACATGAAATTCCTCAAG+AGG | 0.573109 | 4.4:+18004677 | MS.gene34975:CDS |
| TTACAGGGATTTACTGCAGG+TGG | 0.573701 | 4.4:+18006819 | MS.gene34975:intron |
| TCTTGCTATTGTGGTTATGG+TGG | 0.575168 | 4.4:-18003802 | None:intergenic |
| TCAGGCAGGAGCTATGTTGG+GGG | 0.576089 | 4.4:+18002175 | MS.gene34975:intron |
| GGATGAATTATAACCTCTTG+AGG | 0.577902 | 4.4:-18004690 | None:intergenic |
| CATGTCCAGAATTATCATCA+TGG | 0.585319 | 4.4:-18003180 | None:intergenic |
| ACTCAGGAGGAGCCAACTCG+TGG | 0.586746 | 4.4:+18003765 | MS.gene34975:CDS |
| AGTTCAAGGGAAACCATCAA+AGG | 0.587721 | 4.4:+18001872 | MS.gene34975:intron |
| TGGTATAGGCTCTACTCTGG+GGG | 0.591466 | 4.4:+18006696 | MS.gene34975:intron |
| AGCATTCCTCACCTCAATCA+GGG | 0.600342 | 4.4:-18006738 | None:intergenic |
| CTCAGGAGGAGCCAACTCGT+GGG | 0.602290 | 4.4:+18003766 | MS.gene34975:CDS |
| CTTGCAGAGATGAATAACAA+TGG | 0.603204 | 4.4:+18006870 | MS.gene34975:CDS |
| AAAGTGATGATGGTCGTGAT+GGG | 0.607012 | 4.4:-18001212 | None:intergenic |
| TTCTTGTGGAGAAGCTAGTG+AGG | 0.607811 | 4.4:+18003729 | MS.gene34975:CDS |
| TCAAGTATCACATGACACAT+TGG | 0.608400 | 4.4:+18003922 | MS.gene34975:CDS |
| AGTATCACATGACACATTGG+AGG | 0.613160 | 4.4:+18003925 | MS.gene34975:CDS |
| CATGGTGACCATGCAGACCA+TGG | 0.624284 | 4.4:+18003157 | MS.gene34975:CDS |
| AGGTATGTTGAAGAAAACTC+AGG | 0.625019 | 4.4:+18003749 | MS.gene34975:CDS |
| GTATCACATGACACATTGGA+GGG | 0.631044 | 4.4:+18003926 | MS.gene34975:CDS |
| GGTGAACATTCCCATTCTCA+TGG | 0.633552 | 4.4:+18003139 | MS.gene34975:CDS |
| CATGATGATAATTCTGGACA+TGG | 0.636246 | 4.4:+18003181 | MS.gene34975:CDS |
| AAAAGAGTTTGGTAGATGAG+GGG | 0.647576 | 4.4:+18003888 | MS.gene34975:CDS |
| TAAACCCGATAGTTCAGTAG+AGG | 0.648271 | 4.4:-18001239 | None:intergenic |
| AGTGGAAGCAATGCAACCAA+AGG | 0.649556 | 4.4:+18004361 | MS.gene34975:CDS |
| CAGGAGGAGCCAACTCGTGG+GGG | 0.655963 | 4.4:+18003768 | MS.gene34975:CDS |
| AAGTGATGATGGTCGTGATG+GGG | 0.680703 | 4.4:-18001211 | None:intergenic |
| CTGTGACTGATTGTTGACAT+CGG | 0.696774 | 4.4:-18003849 | None:intergenic |
| TATGTTGAAGAAAACTCAGG+AGG | 0.703074 | 4.4:+18003752 | MS.gene34975:CDS |
| CATATCATACCAAAAGCATG+CGG | 0.734324 | 4.4:-18002218 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATACTATTTGATAAAAAA+GGG | - | chr4.4:18003054-18003073 | None:intergenic | 10.0% |
| !!! | AATATATACACATTTAATTT+TGG | - | chr4.4:18006297-18006316 | None:intergenic | 10.0% |
| !!! | AGTTTTTTATATTTTGAAAT+TGG | + | chr4.4:18003629-18003648 | MS.gene34975:intron | 10.0% |
| !!! | ATGTTTTATAAAATGTATTT+AGG | + | chr4.4:18005169-18005188 | MS.gene34975:intron | 10.0% |
| !!! | TTTATTAAATTTCTTCTTTT+TGG | + | chr4.4:18006676-18006695 | MS.gene34975:intron | 10.0% |
| !! | AAAGTAAAAATACTGAAAAA+AGG | - | chr4.4:18002774-18002793 | None:intergenic | 15.0% |
| !! | AATACTATTTGATAAAAAAG+GGG | - | chr4.4:18003053-18003072 | None:intergenic | 15.0% |
| !! | ATACTTATATGTTGAATTAT+TGG | + | chr4.4:18003306-18003325 | MS.gene34975:intron | 15.0% |
| !! | GAAATACTATTTGATAAAAA+AGG | - | chr4.4:18003055-18003074 | None:intergenic | 15.0% |
| !! | GTATAACCATATAAAAAATT+AGG | - | chr4.4:18004856-18004875 | None:intergenic | 15.0% |
| !! | TAATACAAAAAAAAAGAGTT+TGG | + | chr4.4:18003877-18003896 | MS.gene34975:CDS | 15.0% |
| !! | TTAATAAATCATTCTATGTT+TGG | - | chr4.4:18006664-18006683 | None:intergenic | 15.0% |
| !! | TTTATCAAATTTAGGAATTT+AGG | + | chr4.4:18001379-18001398 | MS.gene34975:intron | 15.0% |
| !!! | TACAAAATTTTGATTAATCT+GGG | + | chr4.4:18001834-18001853 | MS.gene34975:intron | 15.0% |
| !!! | TTACTTTTTAATCCTTATAA+TGG | + | chr4.4:18005228-18005247 | MS.gene34975:intron | 15.0% |
| !!! | TTTTAATTTAGTAATTTCAC+TGG | + | chr4.4:18002314-18002333 | MS.gene34975:intron | 15.0% |
| !! | AAATACAAGAAAAGTAACAT+AGG | - | chr4.4:18002578-18002597 | None:intergenic | 20.0% |
| !! | AAATTGGTATTATTTAGATG+GGG | + | chr4.4:18003645-18003664 | MS.gene34975:intron | 20.0% |
| !! | AATCTTAGCAACTAAAAATA+TGG | - | chr4.4:18005130-18005149 | None:intergenic | 20.0% |
| !! | ACAAATAATAAAGTACGAAA+AGG | - | chr4.4:18005931-18005950 | None:intergenic | 20.0% |
| !! | ATCTTAGCAACTAAAAATAT+GGG | - | chr4.4:18005129-18005148 | None:intergenic | 20.0% |
| !! | ATTCAACATATAAGTATACA+AGG | - | chr4.4:18003303-18003322 | None:intergenic | 20.0% |
| !! | GAAATTGGTATTATTTAGAT+GGG | + | chr4.4:18003644-18003663 | MS.gene34975:intron | 20.0% |
| !! | TAAAAAAAACCTATATGCTT+AGG | + | chr4.4:18005338-18005357 | MS.gene34975:intron | 20.0% |
| !! | TAAAAGATCAATCATTATAC+TGG | + | chr4.4:18005293-18005312 | MS.gene34975:intron | 20.0% |
| !! | TATGTTATGCCTAATTAAAT+GGG | - | chr4.4:18004762-18004781 | None:intergenic | 20.0% |
| !! | TATGTTTATTTCAACCATTT+CGG | + | chr4.4:18001318-18001337 | MS.gene34975:intron | 20.0% |
| !! | TGAAATTGGTATTATTTAGA+TGG | + | chr4.4:18003643-18003662 | MS.gene34975:intron | 20.0% |
| !! | TTGTTTCATATTTGACATTT+AGG | + | chr4.4:18001658-18001677 | MS.gene34975:intron | 20.0% |
| !!! | AAATTTCTTCTTTTTGGTAT+AGG | + | chr4.4:18006682-18006701 | MS.gene34975:intron | 20.0% |
| !!! | ACTCTTTTTTTTTGTATTAC+TGG | - | chr4.4:18003876-18003895 | None:intergenic | 20.0% |
| !!! | GTACAAAATTTTGATTAATC+TGG | + | chr4.4:18001833-18001852 | MS.gene34975:intron | 20.0% |
| !!! | TAATCAAAATTTTGTACAGT+AGG | - | chr4.4:18001830-18001849 | None:intergenic | 20.0% |
| !!! | TAATGATTGATCTTTTATTC+AGG | - | chr4.4:18005290-18005309 | None:intergenic | 20.0% |
| !!! | TATTTTATTCCACTAGTTTT+TGG | + | chr4.4:18005070-18005089 | MS.gene34975:intron | 20.0% |
| !!! | TTCAGTATTTTTACTTTTGA+AGG | + | chr4.4:18002777-18002796 | MS.gene34975:intron | 20.0% |
| !!! | TTTTTTCCATCAATTAAGAT+AGG | + | chr4.4:18002853-18002872 | MS.gene34975:intron | 20.0% |
| ! | AAAAATACTGAAAAAAGGTC+AGG | - | chr4.4:18002769-18002788 | None:intergenic | 25.0% |
| ! | AAAACTTGAATAGCCATAAT+AGG | + | chr4.4:18004145-18004164 | MS.gene34975:intron | 25.0% |
| ! | AAAGCAAGATACTAAATACA+TGG | - | chr4.4:18005549-18005568 | None:intergenic | 25.0% |
| ! | AACATCAGAAATTACAACAA+TGG | - | chr4.4:18004082-18004101 | None:intergenic | 25.0% |
| ! | AAGATAGTGAAACTAAAGAA+AGG | - | chr4.4:18001945-18001964 | None:intergenic | 25.0% |
| ! | AATAAAAACAGAGAAGAATG+TGG | - | chr4.4:18002830-18002849 | None:intergenic | 25.0% |
| ! | AATACATAGTAAGAATGAGA+GGG | - | chr4.4:18003678-18003697 | None:intergenic | 25.0% |
| ! | AATTCTCCTATCTTAATTGA+TGG | - | chr4.4:18002862-18002881 | None:intergenic | 25.0% |
| ! | AGGAATTTAGGCAAAATAAA+TGG | + | chr4.4:18001391-18001410 | MS.gene34975:intron | 25.0% |
| ! | AGGTAAAATGTTACGAATAT+TGG | - | chr4.4:18004733-18004752 | None:intergenic | 25.0% |
| ! | AGTATTGTCTTCATTCAATA+GGG | + | chr4.4:18006224-18006243 | MS.gene34975:intron | 25.0% |
| ! | ATAGGAAGAGAGAAAAAAAA+AGG | + | chr4.4:18005808-18005827 | MS.gene34975:intron | 25.0% |
| ! | ATATGATTCTCTTTAACTGT+AGG | + | chr4.4:18003112-18003131 | MS.gene34975:intron | 25.0% |
| ! | ATATTTGACATTTAGGTCTT+TGG | + | chr4.4:18001665-18001684 | MS.gene34975:intron | 25.0% |
| ! | ATATTTGTAGTACATTACAG+AGG | + | chr4.4:18004220-18004239 | MS.gene34975:intron | 25.0% |
| ! | CAATTAAGATAGGAGAATTT+GGG | + | chr4.4:18002863-18002882 | MS.gene34975:intron | 25.0% |
| ! | CAATTAATTAGTGGAAGAAA+AGG | - | chr4.4:18003335-18003354 | None:intergenic | 25.0% |
| ! | CATTCACAATATGATTCATA+AGG | - | chr4.4:18006366-18006385 | None:intergenic | 25.0% |
| ! | CTATGTTATGCCTAATTAAA+TGG | - | chr4.4:18004763-18004782 | None:intergenic | 25.0% |
| ! | GAAACAAAATCAATCAACAA+AGG | - | chr4.4:18002274-18002293 | None:intergenic | 25.0% |
| ! | GACAGTTATTAAAGACAAAT+AGG | + | chr4.4:18004116-18004135 | MS.gene34975:intron | 25.0% |
| ! | GCTGCAATCTATAAAATAAA+AGG | - | chr4.4:18003006-18003025 | None:intergenic | 25.0% |
| ! | GGAATTTAGGCAAAATAAAT+GGG | + | chr4.4:18001392-18001411 | MS.gene34975:intron | 25.0% |
| ! | GGTTGAAATAAACATAAAAG+AGG | - | chr4.4:18001314-18001333 | None:intergenic | 25.0% |
| ! | TATTCCATGCAATTAATTAG+TGG | - | chr4.4:18003344-18003363 | None:intergenic | 25.0% |
| ! | TCAATTAAGATAGGAGAATT+TGG | + | chr4.4:18002862-18002881 | MS.gene34975:intron | 25.0% |
| ! | TGTATTTAGGCTATAATTTC+TGG | + | chr4.4:18005182-18005201 | MS.gene34975:intron | 25.0% |
| ! | TGTTTGTAAGTTATGATTGT+CGG | + | chr4.4:18002032-18002051 | MS.gene34975:intron | 25.0% |
| ! | TTGGACATACTAATAATGAA+GGG | - | chr4.4:18006645-18006664 | None:intergenic | 25.0% |
| ! | TTGGCATATGTTATAAGATA+AGG | - | chr4.4:18004714-18004733 | None:intergenic | 25.0% |
| ! | TTGTTGTAATTTCTGATGTT+TGG | + | chr4.4:18004082-18004101 | MS.gene34975:intron | 25.0% |
| ! | TTTGGACATACTAATAATGA+AGG | - | chr4.4:18006646-18006665 | None:intergenic | 25.0% |
| !! | AAGAAGTAAGCATTTTATCA+AGG | - | chr4.4:18004904-18004923 | None:intergenic | 25.0% |
| !! | GATAAAATGCTTACTTCTTT+TGG | + | chr4.4:18004905-18004924 | MS.gene34975:intron | 25.0% |
| !! | GGGAAGTATAAATCAATATT+AGG | + | chr4.4:18005666-18005685 | MS.gene34975:intron | 25.0% |
| !! | TCATTTACCATATCTTTTTC+AGG | + | chr4.4:18002157-18002176 | MS.gene34975:intron | 25.0% |
| !! | TGGTATGTTTTACTTGTAAT+AGG | + | chr4.4:18002900-18002919 | MS.gene34975:intron | 25.0% |
| !! | TGTTCACAAATTTTGTAGTT+AGG | + | chr4.4:18006330-18006349 | MS.gene34975:intron | 25.0% |
| !!! | ATAATTTTAGCATCAGAGAA+AGG | + | chr4.4:18003397-18003416 | MS.gene34975:intron | 25.0% |
| !!! | ATTGATTTTGTTTCAATGGA+AGG | + | chr4.4:18002280-18002299 | MS.gene34975:intron | 25.0% |
| !!! | CATCTGTTTCAGATATTTTT+TGG | + | chr4.4:18006052-18006071 | MS.gene34975:intron | 25.0% |
| !!! | GTTGATTGATTTTGTTTCAA+TGG | + | chr4.4:18002276-18002295 | MS.gene34975:intron | 25.0% |
| !!! | TAAAAAGTTGTTTTACTCGA+GGG | + | chr4.4:18006535-18006554 | MS.gene34975:intron | 25.0% |
| !!! | TCAATTTTTTCTTGCTATTG+TGG | - | chr4.4:18003814-18003833 | None:intergenic | 25.0% |
| !!! | TGACTATCTCTTATTTTACA+GGG | + | chr4.4:18006804-18006823 | MS.gene34975:intron | 25.0% |
| !!! | TTAAAAAGTTGTTTTACTCG+AGG | + | chr4.4:18006534-18006553 | MS.gene34975:intron | 25.0% |
| !!! | TTGATTCATTGGCTTTATTT+GGG | + | chr4.4:18001901-18001920 | MS.gene34975:CDS | 25.0% |
| !!! | TTGCGTCCTAATTTTTTATA+TGG | + | chr4.4:18004847-18004866 | MS.gene34975:intron | 25.0% |
| !!! | TTTGGGATAATTGATTCTTT+TGG | + | chr4.4:18002880-18002899 | MS.gene34975:intron | 25.0% |
| !!! | TTTGGTATTTTGATAAGATC+TGG | + | chr4.4:18006128-18006147 | MS.gene34975:CDS | 25.0% |
| !!! | TTTTGGGGTTTATCAAATTT+AGG | + | chr4.4:18001371-18001390 | MS.gene34975:intron | 25.0% |
| !!! | TTTTTTTTCTCTCTTCCTAT+TGG | - | chr4.4:18005808-18005827 | None:intergenic | 25.0% |
| AAAAAAAGGTTGTCACCAAA+TGG | + | chr4.4:18005822-18005841 | MS.gene34975:intron | 30.0% | |
| AAAAAAGAGTTTGGTAGATG+AGG | + | chr4.4:18003886-18003905 | MS.gene34975:CDS | 30.0% | |
| AAAAAGAGTTTGGTAGATGA+GGG | + | chr4.4:18003887-18003906 | MS.gene34975:CDS | 30.0% | |
| AAATGCAACTATTCGTGAAA+TGG | + | chr4.4:18001347-18001366 | MS.gene34975:intron | 30.0% | |
| AACTGCTTACCAAAAATTAC+AGG | - | chr4.4:18001754-18001773 | None:intergenic | 30.0% | |
| AATGCAACTATTCGTGAAAT+GGG | + | chr4.4:18001348-18001367 | MS.gene34975:intron | 30.0% | |
| AATTGTACTCTTTCTTCTTG+TGG | + | chr4.4:18003715-18003734 | MS.gene34975:CDS | 30.0% | |
| ACAAACTGAGGAATCAAATA+AGG | - | chr4.4:18001471-18001490 | None:intergenic | 30.0% | |
| AGCTCATTATGCATTATTGT+GGG | + | chr4.4:18002943-18002962 | MS.gene34975:intron | 30.0% | |
| AGGTGAATAATCAACATGTT+CGG | - | chr4.4:18003283-18003302 | None:intergenic | 30.0% | |
| ATAAGGTTTGGAGAAATAAG+GGG | + | chr4.4:18005390-18005409 | MS.gene34975:intron | 30.0% | |
| ATCATATTGTGAATGAGCAT+TGG | + | chr4.4:18006371-18006390 | MS.gene34975:intron | 30.0% | |
| ATGATATGTGTACAACCATT+TGG | - | chr4.4:18005840-18005859 | None:intergenic | 30.0% | |
| ATTACTTTCTGTCAGTAACT+TGG | + | chr4.4:18002081-18002100 | MS.gene34975:intron | 30.0% | |
| ATTTAGGCTGAAAGGTAATT+TGG | + | chr4.4:18004281-18004300 | MS.gene34975:intron | 30.0% | |
| CAAATAATCTCACTGACAAT+GGG | + | chr4.4:18006921-18006940 | MS.gene34975:CDS | 30.0% | |
| CACAACATATTAGAGGAAAA+AGG | - | chr4.4:18002549-18002568 | None:intergenic | 30.0% | |
| CATAAGGTTTGGAGAAATAA+GGG | + | chr4.4:18005389-18005408 | MS.gene34975:intron | 30.0% | |
| CCACTTAAATCTGCATAATT+GGG | + | chr4.4:18001550-18001569 | MS.gene34975:intron | 30.0% | |
| CTAGTGTAACAAACCTATTA+TGG | - | chr4.4:18004161-18004180 | None:intergenic | 30.0% | |
| CTATTATTGTGCTTGTGATA+TGG | + | chr4.4:18005633-18005652 | MS.gene34975:intron | 30.0% | |
| CTCATTCTTACTATGTATTC+TGG | + | chr4.4:18003679-18003698 | MS.gene34975:intron | 30.0% | |
| GAATACATAGTAAGAATGAG+AGG | - | chr4.4:18003679-18003698 | None:intergenic | 30.0% | |
| GCTATTAAAAATCCTAGTGT+AGG | - | chr4.4:18004057-18004076 | None:intergenic | 30.0% | |
| GTTCAAAAGTTGTCACAAAA+TGG | - | chr4.4:18005727-18005746 | None:intergenic | 30.0% | |
| GTTGTACACATATCATTACT+CGG | + | chr4.4:18005844-18005863 | MS.gene34975:intron | 30.0% | |
| TAGCTCATTATGCATTATTG+TGG | + | chr4.4:18002942-18002961 | MS.gene34975:intron | 30.0% | |
| TATTCAAGTCTAACCAATAG+TGG | - | chr4.4:18004019-18004038 | None:intergenic | 30.0% | |
| TCAAATAATCTCACTGACAA+TGG | + | chr4.4:18006920-18006939 | MS.gene34975:CDS | 30.0% | |
| TCATAACATTAGTGATCAAC+TGG | - | chr4.4:18002631-18002650 | None:intergenic | 30.0% | |
| TCATAAGGTTTGGAGAAATA+AGG | + | chr4.4:18005388-18005407 | MS.gene34975:intron | 30.0% | |
| TCATACATGATTTCTTCCAA+GGG | - | chr4.4:18002685-18002704 | None:intergenic | 30.0% | |
| TCCACTTAAATCTGCATAAT+TGG | + | chr4.4:18001549-18001568 | MS.gene34975:intron | 30.0% | |
| TCCATAATGATTACAAACTG+AGG | - | chr4.4:18001483-18001502 | None:intergenic | 30.0% | |
| TCCTCAGTTTGTAATCATTA+TGG | + | chr4.4:18001479-18001498 | MS.gene34975:intron | 30.0% | |
| TCTCAATTACGTTTAGATGT+TGG | + | chr4.4:18002433-18002452 | MS.gene34975:intron | 30.0% | |
| TCTGTGATTTGATGTCATTA+GGG | + | chr4.4:18002501-18002520 | MS.gene34975:intron | 30.0% | |
| TCTTCCACTAATTAATTGCA+TGG | + | chr4.4:18003337-18003356 | MS.gene34975:intron | 30.0% | |
| TGAAGATTTGACATTATCAG+TGG | - | chr4.4:18004419-18004438 | None:intergenic | 30.0% | |
| TTAGTAAAAACAAGCTTTCC+TGG | + | chr4.4:18001445-18001464 | MS.gene34975:intron | 30.0% | |
| TTCAATAGGGAGATGTTTAA+TGG | + | chr4.4:18006237-18006256 | MS.gene34975:intron | 30.0% | |
| TTCATTCTTTATGGATCTGT+TGG | + | chr4.4:18004627-18004646 | MS.gene34975:CDS | 30.0% | |
| TTCTGTGATTTGATGTCATT+AGG | + | chr4.4:18002500-18002519 | MS.gene34975:intron | 30.0% | |
| TTGCAGAGATGAATAACAAT+GGG | + | chr4.4:18006871-18006890 | MS.gene34975:CDS | 30.0% | |
| ! | AACAAAAAGCATAAAACTCC+TGG | - | chr4.4:18006085-18006104 | None:intergenic | 30.0% |
| ! | AAGTTGAAGAACAAAGCTTT+TGG | - | chr4.4:18006164-18006183 | None:intergenic | 30.0% |
| ! | AGGGTATCAAATCAAGTAAA+GGG | - | chr4.4:18006626-18006645 | None:intergenic | 30.0% |
| ! | ATTACTCGGTCTTTTAATAG+GGG | + | chr4.4:18005858-18005877 | MS.gene34975:intron | 30.0% |
| ! | ATTATCCTGCCTGTAATTTT+TGG | + | chr4.4:18001742-18001761 | MS.gene34975:CDS | 30.0% |
| ! | CAAAATTTTGTACAGTAGGT+AGG | - | chr4.4:18001826-18001845 | None:intergenic | 30.0% |
| ! | CATTACTCGGTCTTTTAATA+GGG | + | chr4.4:18005857-18005876 | MS.gene34975:intron | 30.0% |
| ! | GAGTATTGTCTTCATTCAAT+AGG | + | chr4.4:18006223-18006242 | MS.gene34975:intron | 30.0% |
| ! | GCAATTAAGTTGTTAACACA+CGG | - | chr4.4:18005416-18005435 | None:intergenic | 30.0% |
| ! | TATCTCAATCTTTTCTCTGA+TGG | + | chr4.4:18004484-18004503 | MS.gene34975:CDS | 30.0% |
| ! | TCATTACTCGGTCTTTTAAT+AGG | + | chr4.4:18005856-18005875 | MS.gene34975:intron | 30.0% |
| !! | AAGGGTATCAAATCAAGTAA+AGG | - | chr4.4:18006627-18006646 | None:intergenic | 30.0% |
| !! | AAGTTGTATTGACCTTTTGT+TGG | + | chr4.4:18004513-18004532 | MS.gene34975:intron | 30.0% |
| !! | ATCAGTGTATTGATTGAAGA+TGG | + | chr4.4:18003505-18003524 | MS.gene34975:intron | 30.0% |
| !! | GTAGAAAATGGACTAAAAAC+AGG | - | chr4.4:18001522-18001541 | None:intergenic | 30.0% |
| !! | GTTGATTCATTGGCTTTATT+TGG | + | chr4.4:18001900-18001919 | MS.gene34975:CDS | 30.0% |
| !! | TCTTTCATTTTTCTTGTTGC+TGG | + | chr4.4:18004877-18004896 | MS.gene34975:intron | 30.0% |
| !! | TGATTCATTGGCTTTATTTG+GGG | + | chr4.4:18001902-18001921 | MS.gene34975:CDS | 30.0% |
| !! | TTTTTGTTTCTTCTGCATAC+AGG | + | chr4.4:18006097-18006116 | MS.gene34975:intron | 30.0% |
| !!! | ATGACTGAGGTTTTAAATCT+CGG | + | chr4.4:18005570-18005589 | MS.gene34975:intron | 30.0% |
| !!! | CTGACTATCTCTTATTTTAC+AGG | + | chr4.4:18006803-18006822 | MS.gene34975:intron | 30.0% |
| !!! | TTTATTCCACTAGTTTTTGG+CGG | + | chr4.4:18005073-18005092 | MS.gene34975:intron | 30.0% |
| !!! | TTTTCTTGCTATTGTGGTTA+TGG | - | chr4.4:18003808-18003827 | None:intergenic | 30.0% |
| AAAAGAGTTTGGTAGATGAG+GGG | + | chr4.4:18003888-18003907 | MS.gene34975:CDS | 35.0% | |
| AAAAGGGGACAGTAAAACTA+TGG | - | chr4.4:18003038-18003057 | None:intergenic | 35.0% | |
| AAATTACAGGCAGGATAATC+AGG | - | chr4.4:18001741-18001760 | None:intergenic | 35.0% | |
| AACCACCATCCTTCATAAAT+TGG | + | chr4.4:18003553-18003572 | MS.gene34975:intron | 35.0% | |
| AAGCATATCACTACAAACCT+AGG | - | chr4.4:18003249-18003268 | None:intergenic | 35.0% | |
| AATTGGATTTCTATGCAGCA+TGG | - | chr4.4:18002360-18002379 | None:intergenic | 35.0% | |
| ACCACCATCCTTCATAAATT+GGG | + | chr4.4:18003554-18003573 | MS.gene34975:intron | 35.0% | |
| AGGTATGTTGAAGAAAACTC+AGG | + | chr4.4:18003749-18003768 | MS.gene34975:CDS | 35.0% | |
| ATCATTCTGACTACTACCTT+TGG | - | chr4.4:18004380-18004399 | None:intergenic | 35.0% | |
| ATCTAAATCCTCGCTTAGAA+AGG | + | chr4.4:18003964-18003983 | MS.gene34975:CDS | 35.0% | |
| ATTACCTTTCAGCCTAAATG+AGG | - | chr4.4:18004280-18004299 | None:intergenic | 35.0% | |
| ATTCACCTGTTTCAGTTCAA+GGG | + | chr4.4:18001859-18001878 | MS.gene34975:intron | 35.0% | |
| ATTCTTTATGGATCTGTTGG+TGG | + | chr4.4:18004630-18004649 | MS.gene34975:CDS | 35.0% | |
| CATGATGATAATTCTGGACA+TGG | + | chr4.4:18003181-18003200 | MS.gene34975:CDS | 35.0% | |
| CATGTCCAGAATTATCATCA+TGG | - | chr4.4:18003183-18003202 | None:intergenic | 35.0% | |
| CATGTGATTTAGCCTCATTT+AGG | + | chr4.4:18004265-18004284 | MS.gene34975:intron | 35.0% | |
| CCCAATTATGCAGATTTAAG+TGG | - | chr4.4:18001553-18001572 | None:intergenic | 35.0% | |
| CCTTCAATTCAACCAACAAA+AGG | - | chr4.4:18004528-18004547 | None:intergenic | 35.0% | |
| CTATATGCTTAGGAGTGATA+AGG | + | chr4.4:18005348-18005367 | MS.gene34975:intron | 35.0% | |
| CTTATCACTCCTAAGCATAT+AGG | - | chr4.4:18005350-18005369 | None:intergenic | 35.0% | |
| CTTGCAGAGATGAATAACAA+TGG | + | chr4.4:18006870-18006889 | MS.gene34975:CDS | 35.0% | |
| GCACAAATTCAGCCATTATA+AGG | - | chr4.4:18005243-18005262 | None:intergenic | 35.0% | |
| GGATGAATTATAACCTCTTG+AGG | - | chr4.4:18004693-18004712 | None:intergenic | 35.0% | |
| GGGTATCAAATCAAGTAAAG+GGG | - | chr4.4:18006625-18006644 | None:intergenic | 35.0% | |
| GTACACACACAACATATTAG+AGG | - | chr4.4:18002556-18002575 | None:intergenic | 35.0% | |
| GTCATACATGATTTCTTCCA+AGG | - | chr4.4:18002686-18002705 | None:intergenic | 35.0% | |
| GTGGAAGTTACAGTAGAAAA+TGG | - | chr4.4:18001534-18001553 | None:intergenic | 35.0% | |
| TAAATGCTATTCTTGCTTGC+TGG | + | chr4.4:18001612-18001631 | MS.gene34975:intron | 35.0% | |
| TATGTTGAAGAAAACTCAGG+AGG | + | chr4.4:18003752-18003771 | MS.gene34975:CDS | 35.0% | |
| TATTCACCTGTTTCAGTTCA+AGG | + | chr4.4:18001858-18001877 | MS.gene34975:intron | 35.0% | |
| TCAAGTATCACATGACACAT+TGG | + | chr4.4:18003922-18003941 | MS.gene34975:CDS | 35.0% | |
| TCATAGCTTCGATATTGTAC+AGG | - | chr4.4:18006485-18006504 | None:intergenic | 35.0% | |
| TCGCTTAGAAAGGTAAAATG+AGG | + | chr4.4:18003974-18003993 | MS.gene34975:intron | 35.0% | |
| TCTTTAGCTGATCTTTCTAC+AGG | + | chr4.4:18003214-18003233 | MS.gene34975:CDS | 35.0% | |
| TGATTCTCTTTAACTGTAGG+TGG | + | chr4.4:18003115-18003134 | MS.gene34975:intron | 35.0% | |
| TGTATGACATGCTAATGAGA+CGG | + | chr4.4:18002698-18002717 | MS.gene34975:intron | 35.0% | |
| TGTGATATGGTCTCTATTCA+GGG | + | chr4.4:18005646-18005665 | MS.gene34975:intron | 35.0% | |
| TTCACGAATAGTTGCATTTG+AGG | - | chr4.4:18001346-18001365 | None:intergenic | 35.0% | |
| TTCACTGATGGAATTGCATT+AGG | + | chr4.4:18004597-18004616 | MS.gene34975:CDS | 35.0% | |
| TTGCAGCATAATTTCACTGA+TGG | + | chr4.4:18004585-18004604 | MS.gene34975:intron | 35.0% | |
| TTGTGATATGGTCTCTATTC+AGG | + | chr4.4:18005645-18005664 | MS.gene34975:intron | 35.0% | |
| TTTATATACATCGCCATTGC+AGG | + | chr4.4:18006843-18006862 | MS.gene34975:CDS | 35.0% | |
| ! | AAAAAGCATAAAACTCCTGG+TGG | - | chr4.4:18006082-18006101 | None:intergenic | 35.0% |
| ! | AAAAGCATAAAACTCCTGGT+GGG | - | chr4.4:18006081-18006100 | None:intergenic | 35.0% |
| ! | AGTTTGCGGATTGAGTTATT+GGG | + | chr4.4:18006558-18006577 | MS.gene34975:intron | 35.0% |
| ! | ATTTTACAGGGATTTACTGC+AGG | + | chr4.4:18006816-18006835 | MS.gene34975:intron | 35.0% |
| ! | CATATCATACCAAAAGCATG+CGG | - | chr4.4:18002221-18002240 | None:intergenic | 35.0% |
| ! | GATGTTTGTTAATCATCCCT+TGG | + | chr4.4:18002666-18002685 | MS.gene34975:intron | 35.0% |
| ! | GGAAGTGCATTCATTCTTTA+TGG | + | chr4.4:18004618-18004637 | MS.gene34975:CDS | 35.0% |
| ! | GTTGAGTTGTAAGCAGAATT+TGG | + | chr4.4:18006778-18006797 | MS.gene34975:intron | 35.0% |
| ! | TACTGCTTAAGTTTTCGCTA+TGG | + | chr4.4:18004997-18005016 | MS.gene34975:intron | 35.0% |
| ! | TCATTTTACCTTTCTAAGCG+AGG | - | chr4.4:18003975-18003994 | None:intergenic | 35.0% |
| ! | TGATCTTTTATTCAGGAAGC+AGG | - | chr4.4:18005283-18005302 | None:intergenic | 35.0% |
| !! | AAAGGCTGTTGTTGATTCAT+TGG | + | chr4.4:18001890-18001909 | MS.gene34975:CDS | 35.0% |
| !! | ACTATTCGTGAAATGGGTTT+TGG | + | chr4.4:18001354-18001373 | MS.gene34975:intron | 35.0% |
| !! | AGCTTTGTGTCTTTTGTTTC+TGG | + | chr4.4:18002114-18002133 | MS.gene34975:intron | 35.0% |
| !! | AGTGTATTGATTGAAGATGG+AGG | + | chr4.4:18003508-18003527 | MS.gene34975:intron | 35.0% |
| !! | CCTTTTGTTGGTTGAATTGA+AGG | + | chr4.4:18004525-18004544 | MS.gene34975:intron | 35.0% |
| !! | CTATTCGTGAAATGGGTTTT+GGG | + | chr4.4:18001355-18001374 | MS.gene34975:intron | 35.0% |
| !! | CTTGTATTTTGTGTTGACCT+TGG | + | chr4.4:18002589-18002608 | MS.gene34975:intron | 35.0% |
| !! | TATTCGTGAAATGGGTTTTG+GGG | + | chr4.4:18001356-18001375 | MS.gene34975:intron | 35.0% |
| !! | TGTAGTGGACAACTTACAAA+AGG | + | chr4.4:18004785-18004804 | MS.gene34975:intron | 35.0% |
| !!! | GTCTAGAACTCTGTTTTTGT+TGG | + | chr4.4:18004656-18004675 | MS.gene34975:CDS | 35.0% |
| !!! | TCACAGTGCTTTTTCAATTG+AGG | + | chr4.4:18001415-18001434 | MS.gene34975:intron | 35.0% |
| !!! | TTACCATATCTTTTTCAGGC+AGG | + | chr4.4:18002161-18002180 | MS.gene34975:intron | 35.0% |
| AAAGCATAAAACTCCTGGTG+GGG | - | chr4.4:18006080-18006099 | None:intergenic | 40.0% | |
| AAATCAAGTAAAGGGGAGAG+GGG | - | chr4.4:18006618-18006637 | None:intergenic | 40.0% | |
| AATCTCACTGACAATGGGAA+TGG | + | chr4.4:18006926-18006945 | MS.gene34975:CDS | 40.0% | |
| ACGAAAAGGAATGTACGAGA+TGG | - | chr4.4:18005917-18005936 | None:intergenic | 40.0% | |
| AGGCATAACATAGACTGTAG+TGG | + | chr4.4:18004770-18004789 | MS.gene34975:intron | 40.0% | |
| AGTATCACATGACACATTGG+AGG | + | chr4.4:18003925-18003944 | MS.gene34975:CDS | 40.0% | |
| AGTTCAAGGGAAACCATCAA+AGG | + | chr4.4:18001872-18001891 | MS.gene34975:intron | 40.0% | |
| ATGAGACGGGACTAAAAGTT+TGG | + | chr4.4:18002712-18002731 | MS.gene34975:intron | 40.0% | |
| ATGCTTAGGAGTGATAAGGT+GGG | + | chr4.4:18005352-18005371 | MS.gene34975:intron | 40.0% | |
| ATTCTTGTGTTGCAGAGAAG+TGG | + | chr4.4:18004343-18004362 | MS.gene34975:intron | 40.0% | |
| ATTGATGTCACACCTACACT+AGG | + | chr4.4:18004042-18004061 | MS.gene34975:intron | 40.0% | |
| CAAATCAAGTAAAGGGGAGA+GGG | - | chr4.4:18006619-18006638 | None:intergenic | 40.0% | |
| CAGAATTATCATCATGGCCA+TGG | - | chr4.4:18003177-18003196 | None:intergenic | 40.0% | |
| CAGGATAATCAGGCAAATCA+AGG | - | chr4.4:18001731-18001750 | None:intergenic | 40.0% | |
| CATCCTTCATAAATTGGGCA+TGG | + | chr4.4:18003559-18003578 | MS.gene34975:intron | 40.0% | |
| CATGCCCAATTTATGAAGGA+TGG | - | chr4.4:18003561-18003580 | None:intergenic | 40.0% | |
| CATGGCCATGATGATAATTC+TGG | + | chr4.4:18003175-18003194 | MS.gene34975:CDS | 40.0% | |
| CCTAATTAAATGGGATGCTG+AGG | - | chr4.4:18004753-18004772 | None:intergenic | 40.0% | |
| CCTCAGCATCCCATTTAATT+AGG | + | chr4.4:18004750-18004769 | MS.gene34975:intron | 40.0% | |
| CTCAATTGTCGTTGACCAAT+AGG | + | chr4.4:18005790-18005809 | MS.gene34975:intron | 40.0% | |
| CTGTGACTGATTGTTGACAT+CGG | - | chr4.4:18003852-18003871 | None:intergenic | 40.0% | |
| GAATCAACAACAGCCTTTGA+TGG | - | chr4.4:18001888-18001907 | None:intergenic | 40.0% | |
| GCACAACTGTTAATACTCCA+AGG | - | chr4.4:18002609-18002628 | None:intergenic | 40.0% | |
| GCTTACCAAAAATTACAGGC+AGG | - | chr4.4:18001750-18001769 | None:intergenic | 40.0% | |
| GGGACAGTAAAACTATGGAA+AGG | - | chr4.4:18003033-18003052 | None:intergenic | 40.0% | |
| GGGTGAAAGATCATAAGGTT+TGG | + | chr4.4:18005378-18005397 | MS.gene34975:intron | 40.0% | |
| GTATCACATGACACATTGGA+GGG | + | chr4.4:18003926-18003945 | MS.gene34975:CDS | 40.0% | |
| GTATCTTGCTTTCATGACTG+AGG | + | chr4.4:18005557-18005576 | MS.gene34975:intron | 40.0% | |
| GTATGACATGCTAATGAGAC+GGG | + | chr4.4:18002699-18002718 | MS.gene34975:intron | 40.0% | |
| TAAACCCGATAGTTCAGTAG+AGG | - | chr4.4:18001242-18001261 | None:intergenic | 40.0% | |
| TACTGCCTCTACTGAACTAT+CGG | + | chr4.4:18001234-18001253 | MS.gene34975:CDS | 40.0% | |
| TAGAGGCAGTAAAGTGATGA+TGG | - | chr4.4:18001225-18001244 | None:intergenic | 40.0% | |
| TATGCTTAGGAGTGATAAGG+TGG | + | chr4.4:18005351-18005370 | MS.gene34975:intron | 40.0% | |
| TATTAGCCGCCAAAAACTAG+TGG | - | chr4.4:18005082-18005101 | None:intergenic | 40.0% | |
| TCAAATCAAGTAAAGGGGAG+AGG | - | chr4.4:18006620-18006639 | None:intergenic | 40.0% | |
| TCTACTGAACTATCGGGTTT+AGG | + | chr4.4:18001241-18001260 | MS.gene34975:CDS | 40.0% | |
| TGTTTCTTCTGCATACAGGT+TGG | + | chr4.4:18006101-18006120 | MS.gene34975:intron | 40.0% | |
| TTAGCCTCATTTAGGCTGAA+AGG | + | chr4.4:18004273-18004292 | MS.gene34975:intron | 40.0% | |
| TTCTCTTTAACTGTAGGTGG+TGG | + | chr4.4:18003118-18003137 | MS.gene34975:intron | 40.0% | |
| TTGCATTTGAGGAACCGAAA+TGG | - | chr4.4:18001335-18001354 | None:intergenic | 40.0% | |
| TTGTCAAATATCCGCCATGA+TGG | - | chr4.4:18003587-18003606 | None:intergenic | 40.0% | |
| TTTGGTATAGGCTCTACTCT+GGG | + | chr4.4:18006694-18006713 | MS.gene34975:intron | 40.0% | |
| ! | CAACTTTTTATCTGCACTCG+TGG | + | chr4.4:18006178-18006197 | MS.gene34975:CDS | 40.0% |
| ! | GAGTTTGCGGATTGAGTTAT+TGG | + | chr4.4:18006557-18006576 | MS.gene34975:intron | 40.0% |
| ! | TTTTGGTATAGGCTCTACTC+TGG | + | chr4.4:18006693-18006712 | MS.gene34975:intron | 40.0% |
| !! | AAAGTGATGATGGTCGTGAT+GGG | - | chr4.4:18001215-18001234 | None:intergenic | 40.0% |
| !! | TAAAGTGATGATGGTCGTGA+TGG | - | chr4.4:18001216-18001235 | None:intergenic | 40.0% |
| !! | TACTTTTGAAGGAAGCTGAG+TGG | + | chr4.4:18002788-18002807 | MS.gene34975:intron | 40.0% |
| !! | TCTTGCTATTGTGGTTATGG+TGG | - | chr4.4:18003805-18003824 | None:intergenic | 40.0% |
| !! | TGAGCATTGGAGAAACGAAA+TGG | + | chr4.4:18006384-18006403 | MS.gene34975:intron | 40.0% |
| !!! | ATATTTTTTGGTTCCCCACC+AGG | + | chr4.4:18006064-18006083 | MS.gene34975:intron | 40.0% |
| !!! | CTACAGTTTTGGACCACTAT+TGG | + | chr4.4:18004003-18004022 | MS.gene34975:intron | 40.0% |
| !!! | TGCATACAGGTTGGTGATTT+TGG | + | chr4.4:18006110-18006129 | MS.gene34975:intron | 40.0% |
| AATAGGGGAAGCAAAACTGC+TGG | + | chr4.4:18005873-18005892 | MS.gene34975:intron | 45.0% | |
| ACTGCCTCTACTGAACTATC+GGG | + | chr4.4:18001235-18001254 | MS.gene34975:CDS | 45.0% | |
| AGCATTCCTCACCTCAATCA+GGG | - | chr4.4:18006741-18006760 | None:intergenic | 45.0% | |
| AGCGAGGATTTAGATTGAGC+TGG | - | chr4.4:18003959-18003978 | None:intergenic | 45.0% | |
| AGGTCTTTGGTTGAATGCGT+TGG | + | chr4.4:18001678-18001697 | MS.gene34975:intron | 45.0% | |
| AGTGGAAGCAATGCAACCAA+AGG | + | chr4.4:18004361-18004380 | MS.gene34975:CDS | 45.0% | |
| AGTTATGATTGTCGGCATGC+TGG | + | chr4.4:18002040-18002059 | MS.gene34975:intron | 45.0% | |
| ATGCTCCATGATGTATCTGC+TGG | + | chr4.4:18006756-18006775 | MS.gene34975:intron | 45.0% | |
| CTCAACCAGCAGATACATCA+TGG | - | chr4.4:18006764-18006783 | None:intergenic | 45.0% | |
| CTGAGGAATCAAATAAGGCC+AGG | - | chr4.4:18001466-18001485 | None:intergenic | 45.0% | |
| GCCCAATTTATGAAGGATGG+TGG | - | chr4.4:18003558-18003577 | None:intergenic | 45.0% | |
| GCTCCTGCCTGAAAAAGATA+TGG | - | chr4.4:18002167-18002186 | None:intergenic | 45.0% | |
| GGCACATGAAATTCCTCAAG+AGG | + | chr4.4:18004677-18004696 | MS.gene34975:CDS | 45.0% | |
| GGTCTTTGGTTGAATGCGTT+GGG | + | chr4.4:18001679-18001698 | MS.gene34975:intron | 45.0% | |
| GGTGAACATTCCCATTCTCA+TGG | + | chr4.4:18003139-18003158 | MS.gene34975:CDS | 45.0% | |
| GGTTGGGGTGAAAGATCATA+AGG | + | chr4.4:18005373-18005392 | MS.gene34975:intron | 45.0% | |
| GGTTTCCCTTGAACTGAAAC+AGG | - | chr4.4:18001867-18001886 | None:intergenic | 45.0% | |
| TCTACAGGAATGTCTGTCCT+AGG | + | chr4.4:18003229-18003248 | MS.gene34975:CDS | 45.0% | |
| TGCATGGTCACCATGAGAAT+GGG | - | chr4.4:18003152-18003171 | None:intergenic | 45.0% | |
| TGCTATTGTGGTTATGGTGG+TGG | - | chr4.4:18003802-18003821 | None:intergenic | 45.0% | |
| TTACAGGGATTTACTGCAGG+TGG | + | chr4.4:18006819-18006838 | MS.gene34975:intron | 45.0% | |
| TTAGGAGTGATAAGGTGGGT+TGG | + | chr4.4:18005356-18005375 | MS.gene34975:intron | 45.0% | |
| TTCTTGTGGAGAAGCTAGTG+AGG | + | chr4.4:18003729-18003748 | MS.gene34975:CDS | 45.0% | |
| TTGGTATAGGCTCTACTCTG+GGG | + | chr4.4:18006695-18006714 | MS.gene34975:intron | 45.0% | |
| TTTCAGGCAGGAGCTATGTT+GGG | + | chr4.4:18002173-18002192 | MS.gene34975:intron | 45.0% | |
| ! | ATGCTTTGAGCGTAGTGAAC+TGG | + | chr4.4:18005960-18005979 | MS.gene34975:intron | 45.0% |
| ! | ATGGGAATGGCTTTTGCACT+TGG | + | chr4.4:18006939-18006958 | MS.gene34975:CDS | 45.0% |
| ! | CGGGACTAAAAGTTTGGAAC+TGG | + | chr4.4:18002718-18002737 | MS.gene34975:intron | 45.0% |
| ! | GTTTTACTCGAGGGAGTTTG+CGG | + | chr4.4:18006544-18006563 | MS.gene34975:intron | 45.0% |
| ! | TACCAAAAGCATGCGGTAGT+TGG | - | chr4.4:18002214-18002233 | None:intergenic | 45.0% |
| ! | TAGGAGTGATAAGGTGGGTT+GGG | + | chr4.4:18005357-18005376 | MS.gene34975:intron | 45.0% |
| ! | TGAGGATGTCGCTACAGTTT+TGG | + | chr4.4:18003992-18004011 | MS.gene34975:intron | 45.0% |
| ! | TGTGTGGGCTTTCTGAGAAT+TGG | - | chr4.4:18002377-18002396 | None:intergenic | 45.0% |
| !! | AAGTGATGATGGTCGTGATG+GGG | - | chr4.4:18001214-18001233 | None:intergenic | 45.0% |
| !! | CATTGGCTTTATTTGGGGTC+AGG | + | chr4.4:18001907-18001926 | MS.gene34975:intron | 45.0% |
| !! | CTGTTCGTTTCTAGTGAGCA+TGG | + | chr4.4:18001702-18001721 | MS.gene34975:CDS | 45.0% |
| !! | TGTATTCTGGTTCTTGCAGC+TGG | + | chr4.4:18003692-18003711 | MS.gene34975:intron | 45.0% |
| !! | TTTATGGATCTGTTGGTGGC+TGG | + | chr4.4:18004634-18004653 | MS.gene34975:CDS | 45.0% |
| !! | TTTTCAGGCAGGAGCTATGT+TGG | + | chr4.4:18002172-18002191 | MS.gene34975:intron | 45.0% |
| !!! | TTTTTCTTAATAAATTAAAA+TGG | + | chr4.4:18006447-18006466 | MS.gene34975:intron | 5.0% |
| AGTCATCCCTGATTGAGGTG+AGG | + | chr4.4:18006732-18006751 | MS.gene34975:intron | 50.0% | |
| AGTCTGTGTGTGTGTGTGTG+TGG | - | chr4.4:18002393-18002412 | None:intergenic | 50.0% | |
| CCAAACACAAGACTGCTTGC+TGG | - | chr4.4:18004463-18004482 | None:intergenic | 50.0% | |
| CTGCATGGTCACCATGAGAA+TGG | - | chr4.4:18003153-18003172 | None:intergenic | 50.0% | |
| GAGCATTCCTCACCTCAATC+AGG | - | chr4.4:18006742-18006761 | None:intergenic | 50.0% | |
| GCGCCATGCCCAATTTATGA+AGG | - | chr4.4:18003565-18003584 | None:intergenic | 50.0% | |
| GGAATGCCAAAAATCCGCCA+TGG | + | chr4.4:18003529-18003548 | MS.gene34975:intron | 50.0% | |
| GTCTGTGTGTGTGTGTGTGT+GGG | - | chr4.4:18002392-18002411 | None:intergenic | 50.0% | |
| TCAATCAGGGATGACTGTCC+AGG | - | chr4.4:18006728-18006747 | None:intergenic | 50.0% | |
| TGGACAGTCATCCCTGATTG+AGG | + | chr4.4:18006727-18006746 | MS.gene34975:CDS | 50.0% | |
| TGGTATAGGCTCTACTCTGG+GGG | + | chr4.4:18006696-18006715 | MS.gene34975:intron | 50.0% | |
| TTCAGGCAGGAGCTATGTTG+GGG | + | chr4.4:18002174-18002193 | MS.gene34975:intron | 50.0% | |
| TTGAAGGAAGCTGAGTGGCA+GGG | + | chr4.4:18002793-18002812 | MS.gene34975:intron | 50.0% | |
| TTTGAAGGAAGCTGAGTGGC+AGG | + | chr4.4:18002792-18002811 | MS.gene34975:intron | 50.0% | |
| ! | ATGAAGGATGGTGGTTGCCA+TGG | - | chr4.4:18003549-18003568 | None:intergenic | 50.0% |
| ! | CACCAACTACCGCATGCTTT+TGG | + | chr4.4:18002209-18002228 | MS.gene34975:CDS | 50.0% |
| ! | CCAGCAAGCAGTCTTGTGTT+TGG | + | chr4.4:18004460-18004479 | MS.gene34975:CDS | 50.0% |
| !! | AGGAGTGATAAGGTGGGTTG+GGG | + | chr4.4:18005358-18005377 | MS.gene34975:intron | 50.0% |
| !!! | TGGTTGCCATGGCGGATTTT+TGG | - | chr4.4:18003538-18003557 | None:intergenic | 50.0% |
| AATTGGGCATGGCGCCATCA+TGG | + | chr4.4:18003570-18003589 | MS.gene34975:intron | 55.0% | |
| CAAGTAAAGGGGAGAGGGGA+AGG | - | chr4.4:18006614-18006633 | None:intergenic | 55.0% | |
| CATCATGGCCATGGTCTGCA+TGG | - | chr4.4:18003168-18003187 | None:intergenic | 55.0% | |
| CATGGTGACCATGCAGACCA+TGG | + | chr4.4:18003157-18003176 | MS.gene34975:CDS | 55.0% | |
| CTCTGCAAGCACTCCTGCAA+TGG | - | chr4.4:18006859-18006878 | None:intergenic | 55.0% | |
| TCAGGCAGGAGCTATGTTGG+GGG | + | chr4.4:18002175-18002194 | MS.gene34975:intron | 55.0% | |
| ! | AAGGATGGTGGTTGCCATGG+CGG | - | chr4.4:18003546-18003565 | None:intergenic | 55.0% |
| ! | AGACTGCTTGCTGGTCTAGC+TGG | - | chr4.4:18004454-18004473 | None:intergenic | 55.0% |
| ! | CTACTCTGGGGGAAAGATCC+TGG | + | chr4.4:18006707-18006726 | MS.gene34975:CDS | 55.0% |
| ACTCAGGAGGAGCCAACTCG+TGG | + | chr4.4:18003765-18003784 | MS.gene34975:CDS | 60.0% | |
| CTCAGGAGGAGCCAACTCGT+GGG | + | chr4.4:18003766-18003785 | MS.gene34975:CDS | 60.0% | |
| TCAGGAGGAGCCAACTCGTG+GGG | + | chr4.4:18003767-18003786 | MS.gene34975:CDS | 60.0% | |
| TCTGCACTCGTGGCACTTGC+AGG | + | chr4.4:18006188-18006207 | MS.gene34975:CDS | 60.0% | |
| ! | GGCACTTGCAGGCACTGCAT+TGG | + | chr4.4:18006199-18006218 | MS.gene34975:CDS | 60.0% |
| CAGGAGGAGCCAACTCGTGG+GGG | + | chr4.4:18003768-18003787 | MS.gene34975:CDS | 65.0% | |
| TGGGCATGGCGCCATCATGG+CGG | + | chr4.4:18003573-18003592 | MS.gene34975:intron | 65.0% | |
| GCGTCCATGCCCCCACGAGT+TGG | - | chr4.4:18003780-18003799 | None:intergenic | 70.0% | |
| GGAGCCAACTCGTGGGGGCA+TGG | + | chr4.4:18003773-18003792 | MS.gene34975:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 18001187 | 18006980 | 18001187 | ID=MS.gene34975 |
| chr4.4 | mRNA | 18001187 | 18006980 | 18001187 | ID=MS.gene34975.t1;Parent=MS.gene34975 |
| chr4.4 | exon | 18001187 | 18001262 | 18001187 | ID=MS.gene34975.t1.exon1;Parent=MS.gene34975.t1 |
| chr4.4 | CDS | 18001187 | 18001262 | 18001187 | ID=cds.MS.gene34975.t1;Parent=MS.gene34975.t1 |
| chr4.4 | exon | 18001680 | 18001763 | 18001680 | ID=MS.gene34975.t1.exon2;Parent=MS.gene34975.t1 |
| chr4.4 | CDS | 18001680 | 18001763 | 18001680 | ID=cds.MS.gene34975.t1;Parent=MS.gene34975.t1 |
| chr4.4 | exon | 18001874 | 18001923 | 18001874 | ID=MS.gene34975.t1.exon3;Parent=MS.gene34975.t1 |
| chr4.4 | CDS | 18001874 | 18001923 | 18001874 | ID=cds.MS.gene34975.t1;Parent=MS.gene34975.t1 |
| chr4.4 | exon | 18002179 | 18002230 | 18002179 | ID=MS.gene34975.t1.exon4;Parent=MS.gene34975.t1 |
| chr4.4 | CDS | 18002179 | 18002230 | 18002179 | ID=cds.MS.gene34975.t1;Parent=MS.gene34975.t1 |
| chr4.4 | exon | 18003134 | 18003250 | 18003134 | ID=MS.gene34975.t1.exon5;Parent=MS.gene34975.t1 |
| chr4.4 | CDS | 18003134 | 18003250 | 18003134 | ID=cds.MS.gene34975.t1;Parent=MS.gene34975.t1 |
| chr4.4 | exon | 18003711 | 18003985 | 18003711 | ID=MS.gene34975.t1.exon6;Parent=MS.gene34975.t1 |
| chr4.4 | CDS | 18003711 | 18003985 | 18003711 | ID=cds.MS.gene34975.t1;Parent=MS.gene34975.t1 |
| chr4.4 | exon | 18004358 | 18004510 | 18004358 | ID=MS.gene34975.t1.exon7;Parent=MS.gene34975.t1 |
| chr4.4 | CDS | 18004358 | 18004510 | 18004358 | ID=cds.MS.gene34975.t1;Parent=MS.gene34975.t1 |
| chr4.4 | exon | 18004591 | 18004698 | 18004591 | ID=MS.gene34975.t1.exon8;Parent=MS.gene34975.t1 |
| chr4.4 | CDS | 18004591 | 18004698 | 18004591 | ID=cds.MS.gene34975.t1;Parent=MS.gene34975.t1 |
| chr4.4 | exon | 18006119 | 18006220 | 18006119 | ID=MS.gene34975.t1.exon9;Parent=MS.gene34975.t1 |
| chr4.4 | CDS | 18006119 | 18006220 | 18006119 | ID=cds.MS.gene34975.t1;Parent=MS.gene34975.t1 |
| chr4.4 | exon | 18006704 | 18006748 | 18006704 | ID=MS.gene34975.t1.exon10;Parent=MS.gene34975.t1 |
| chr4.4 | CDS | 18006704 | 18006748 | 18006704 | ID=cds.MS.gene34975.t1;Parent=MS.gene34975.t1 |
| chr4.4 | exon | 18006825 | 18006980 | 18006825 | ID=MS.gene34975.t1.exon11;Parent=MS.gene34975.t1 |
| chr4.4 | CDS | 18006825 | 18006980 | 18006825 | ID=cds.MS.gene34975.t1;Parent=MS.gene34975.t1 |
| Gene Sequence |
| Protein sequence |
