Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060573.t1 | XP_013458054.1 | 98.2 | 941 | 17 | 0 | 1 | 941 | 1 | 941 | 0.00E+00 | 1821.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060573.t1 | O24617 | 74.4 | 941 | 236 | 3 | 1 | 941 | 1 | 936 | 0.0e+00 | 1419.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060573.t1 | A0A072V1T7 | 98.2 | 941 | 17 | 0 | 1 | 941 | 1 | 941 | 0.0e+00 | 1821.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060573.t1 | MTR_4g111945 | 98.193 | 941 | 17 | 0 | 1 | 941 | 1 | 941 | 0.0 | 1913 |
MS.gene060573.t1 | MTR_1g100683 | 27.225 | 764 | 474 | 23 | 159 | 861 | 254 | 996 | 7.38e-59 | 219 |
MS.gene060573.t1 | MTR_1g100683 | 27.225 | 764 | 474 | 23 | 159 | 861 | 254 | 996 | 7.38e-59 | 219 |
MS.gene060573.t1 | MTR_7g109470 | 29.260 | 622 | 342 | 22 | 294 | 861 | 643 | 1220 | 1.18e-51 | 197 |
MS.gene060573.t1 | MTR_6g086270 | 37.864 | 309 | 160 | 8 | 581 | 861 | 789 | 1093 | 1.33e-48 | 188 |
MS.gene060573.t1 | MTR_6g086270 | 26.087 | 391 | 232 | 15 | 124 | 479 | 435 | 803 | 3.75e-15 | 80.9 |
MS.gene060573.t1 | MTR_5g093110 | 27.258 | 609 | 374 | 19 | 285 | 853 | 175 | 754 | 7.20e-47 | 181 |
MS.gene060573.t1 | MTR_1g045670 | 31.250 | 192 | 120 | 4 | 664 | 855 | 766 | 945 | 9.42e-18 | 89.4 |
MS.gene060573.t1 | MTR_5g068600 | 28.846 | 208 | 133 | 3 | 649 | 855 | 418 | 611 | 1.80e-15 | 81.6 |
MS.gene060573.t1 | MTR_5g068600 | 28.846 | 208 | 133 | 3 | 649 | 855 | 318 | 511 | 1.86e-15 | 81.3 |
MS.gene060573.t1 | MTR_4g088920 | 23.832 | 214 | 147 | 4 | 649 | 861 | 414 | 612 | 1.90e-12 | 72.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060573.t1 | AT3G18524 | 74.389 | 941 | 236 | 3 | 1 | 941 | 1 | 936 | 0.0 | 1469 |
MS.gene060573.t1 | AT4G25540 | 27.885 | 624 | 387 | 13 | 281 | 861 | 406 | 1009 | 3.75e-57 | 214 |
MS.gene060573.t1 | AT4G17380 | 29.568 | 602 | 347 | 22 | 294 | 854 | 164 | 729 | 6.50e-51 | 193 |
MS.gene060573.t1 | AT4G17380 | 30.410 | 536 | 308 | 19 | 294 | 789 | 164 | 674 | 6.17e-49 | 186 |
MS.gene060573.t1 | AT3G24495 | 37.460 | 315 | 162 | 9 | 580 | 868 | 753 | 1058 | 9.60e-47 | 182 |
MS.gene060573.t1 | AT3G24495 | 25.135 | 370 | 227 | 11 | 120 | 457 | 377 | 728 | 9.73e-14 | 76.3 |
MS.gene060573.t1 | AT4G02070 | 33.434 | 332 | 202 | 6 | 540 | 861 | 949 | 1271 | 8.27e-45 | 176 |
MS.gene060573.t1 | AT4G02070 | 33.434 | 332 | 202 | 6 | 540 | 861 | 946 | 1268 | 8.33e-45 | 176 |
MS.gene060573.t1 | AT3G20475 | 27.529 | 603 | 368 | 21 | 291 | 853 | 179 | 752 | 1.13e-44 | 174 |
MS.gene060573.t1 | AT3G20475 | 27.319 | 593 | 362 | 21 | 291 | 843 | 179 | 742 | 2.81e-42 | 166 |
MS.gene060573.t1 | AT3G20475 | 27.211 | 588 | 359 | 21 | 291 | 838 | 179 | 737 | 4.70e-41 | 162 |
MS.gene060573.t1 | AT5G54090 | 30.288 | 208 | 130 | 3 | 649 | 855 | 424 | 617 | 4.86e-19 | 93.2 |
MS.gene060573.t1 | AT3G24320 | 32.105 | 190 | 117 | 5 | 664 | 853 | 765 | 942 | 2.96e-18 | 90.9 |
MS.gene060573.t1 | AT3G24320 | 32.105 | 190 | 117 | 5 | 664 | 853 | 520 | 697 | 3.11e-18 | 90.9 |
MS.gene060573.t1 | AT3G24495 | 25.135 | 370 | 227 | 11 | 120 | 457 | 377 | 728 | 1.66e-13 | 75.5 |
Find 190 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTTCTGCCCTATCCTTAA+TGG | 0.147984 | 8.4:-16105475 | MS.gene060573:CDS |
CAACAAATGCTTCAAGAATT+TGG | 0.163300 | 8.4:+16104842 | None:intergenic |
GCTAAGGCGACAACACTTTC+AGG | 0.194610 | 8.4:+16105531 | None:intergenic |
TCACTTAACTTCCGTGAAAA+TGG | 0.217898 | 8.4:-16113371 | MS.gene060573:CDS |
GAGCAAATATTTGAAAGATT+TGG | 0.230431 | 8.4:-16111717 | MS.gene060573:CDS |
AAGAATTTGGCGAGCCTTTA+CGG | 0.238865 | 8.4:+16104855 | None:intergenic |
GAAACTTCATCAATATTAAA+AGG | 0.253143 | 8.4:-16107989 | MS.gene060573:CDS |
GTTACTAAGCTTTGCTGATT+TGG | 0.264775 | 8.4:-16111060 | MS.gene060573:CDS |
GAATTTGCACCTGGTGCTTT+GGG | 0.265294 | 8.4:-16113041 | MS.gene060573:CDS |
CAAGCTCAATAAATTTGTTT+AGG | 0.289581 | 8.4:+16111672 | None:intergenic |
AAACTCCCCGAGCTCAAATT+AGG | 0.289779 | 8.4:-16115407 | MS.gene060573:intron |
ACATGTTGTTAAACTTTATC+AGG | 0.302362 | 8.4:-16112628 | MS.gene060573:intron |
AGTTGGTTTCAAATAATAAC+AGG | 0.302730 | 8.4:-16110659 | MS.gene060573:CDS |
TAAACTTCACTCCATCTTTA+CGG | 0.311723 | 8.4:+16111372 | None:intergenic |
GGGTTTCCAATACGATAAAC+TGG | 0.314642 | 8.4:+16111393 | None:intergenic |
ATTACCAGGTGTACCGCTTT+TGG | 0.318900 | 8.4:+16113463 | None:intergenic |
TTAGACAAGGGAACGCAATT+TGG | 0.319799 | 8.4:-16111473 | MS.gene060573:CDS |
AGCTGAATTGATTTCCGAAT+TGG | 0.322151 | 8.4:-16111087 | MS.gene060573:CDS |
TGAATTTGCACCTGGTGCTT+TGG | 0.325654 | 8.4:-16113042 | MS.gene060573:CDS |
AGAAGGAAGAGCCGAAAATA+AGG | 0.327757 | 8.4:-16111430 | MS.gene060573:CDS |
CTCTTCTGTAGATTCCATTA+AGG | 0.328742 | 8.4:+16105461 | None:intergenic |
ACATCAACTTACGACGGATT+TGG | 0.329652 | 8.4:-16107920 | MS.gene060573:intron |
AATGGGTGCACCATTGGATT+AGG | 0.347556 | 8.4:-16113353 | MS.gene060573:CDS |
ACCTTGATCATCTAGAGAAC+GGG | 0.350403 | 8.4:-16111634 | MS.gene060573:CDS |
TTCAAGCATTTCTTGCATAA+AGG | 0.352158 | 8.4:+16108009 | None:intergenic |
GTTTATTTGGTCTCATGAAT+AGG | 0.354518 | 8.4:-16112860 | MS.gene060573:CDS |
CTTACAAGCTTGCAATCATT+TGG | 0.355956 | 8.4:+16110776 | None:intergenic |
TAGAGAAAAGGCAGCAGAAT+TGG | 0.360202 | 8.4:-16105508 | MS.gene060573:CDS |
AAACTTCACTCCATCTTTAC+GGG | 0.362278 | 8.4:+16111373 | None:intergenic |
ACTGCATTAGCCGATGAAAA+TGG | 0.364221 | 8.4:-16106694 | MS.gene060573:CDS |
GTTGATTTGCCACCCATGTT+AGG | 0.365141 | 8.4:+16110635 | None:intergenic |
AGTTATGACACTACACTATC+TGG | 0.365622 | 8.4:-16111593 | MS.gene060573:CDS |
TCAGATGCTGCCTCAGATCT+TGG | 0.368959 | 8.4:+16112712 | None:intergenic |
ATATCGTTTACATCTAATAA+TGG | 0.369553 | 8.4:+16112786 | None:intergenic |
CAGAAACCCTTGTGCTTGCT+TGG | 0.383089 | 8.4:+16115244 | None:intergenic |
CTTGTGTGGAGGCTCAAGAC+TGG | 0.384137 | 8.4:-16110811 | MS.gene060573:CDS |
CGTGAAAATGGGTGCACCAT+TGG | 0.390296 | 8.4:-16113359 | MS.gene060573:CDS |
CAACACCCAGTTTATCGTAT+TGG | 0.394945 | 8.4:-16111399 | MS.gene060573:CDS |
GCAGTTCAAGATTTAGTGTC+TGG | 0.395743 | 8.4:-16113068 | MS.gene060573:CDS |
AGTAGTGTGATAGTAGGTTT+TGG | 0.401446 | 8.4:+16113640 | None:intergenic |
AGCGGTACACCTGGTAATAT+TGG | 0.403040 | 8.4:-16113458 | MS.gene060573:CDS |
AGTGACAGCGCAACAACAAC+TGG | 0.407997 | 8.4:+16113389 | None:intergenic |
AGAGATCTGGTACAGGATCT+TGG | 0.409711 | 8.4:-16113116 | MS.gene060573:CDS |
ATGAGGGCAGCAGCTCTAAC+TGG | 0.418559 | 8.4:-16113493 | MS.gene060573:CDS |
GGAGCTTGTGATCAGAGTTT+CGG | 0.422275 | 8.4:-16105582 | MS.gene060573:CDS |
CAGCAGCTCTAACTGGCAAC+TGG | 0.425469 | 8.4:-16113486 | MS.gene060573:CDS |
GAGTCAGCATTGGTTGGTCT+TGG | 0.426449 | 8.4:-16113260 | MS.gene060573:CDS |
CGCAAGCTTGGCAAGAAGTA+AGG | 0.428510 | 8.4:-16104792 | MS.gene060573:CDS |
AACTTTAATGCCTTATCTAC+AGG | 0.429470 | 8.4:+16111494 | None:intergenic |
GGTGATGTCAGGTCTTGTAT+AGG | 0.429489 | 8.4:+16111019 | None:intergenic |
GTGATGTCAGGTCTTGTATA+GGG | 0.433096 | 8.4:+16111020 | None:intergenic |
TTGATAATCATTGATGAGTT+GGG | 0.441039 | 8.4:-16107950 | MS.gene060573:CDS |
TACAGGATCCGAGGGCCATT+AGG | 0.444580 | 8.4:-16114611 | MS.gene060573:intron |
GCTTAGTAACACGTCCAATT+CGG | 0.446279 | 8.4:+16111073 | None:intergenic |
GATACTCATAAGCAAATTGT+TGG | 0.447044 | 8.4:-16106664 | MS.gene060573:CDS |
CTTGATAATCATTGATGAGT+TGG | 0.451893 | 8.4:-16107951 | MS.gene060573:CDS |
CACTTAACTTCCGTGAAAAT+GGG | 0.453131 | 8.4:-16113370 | MS.gene060573:CDS |
AAACTGATGAGATGTCTAAA+GGG | 0.458547 | 8.4:-16104879 | MS.gene060573:CDS |
GCGAAACCTAATTTGAGCTC+GGG | 0.459559 | 8.4:+16115401 | None:intergenic |
TAGGACCTGTACAGCTGGAA+TGG | 0.468873 | 8.4:-16112841 | MS.gene060573:CDS |
GAAACTGATGAGATGTCTAA+AGG | 0.470476 | 8.4:-16104880 | MS.gene060573:CDS |
ATTTGAAAGATTTGGAGCTA+TGG | 0.471971 | 8.4:-16111709 | MS.gene060573:CDS |
TCTTGATCTTCCTGTAGATA+AGG | 0.474885 | 8.4:-16111504 | MS.gene060573:CDS |
GCCTTACATTAAAAGTGCTC+TGG | 0.478506 | 8.4:-16111774 | MS.gene060573:CDS |
AGGATGCACAACACTGTCAT+TGG | 0.479566 | 8.4:-16104747 | MS.gene060573:CDS |
CCATTAGGTTCTTTGACCGT+CGG | 0.481973 | 8.4:-16114596 | MS.gene060573:CDS |
CCTCATAGACCTCAAGTGTA+TGG | 0.485875 | 8.4:+16113510 | None:intergenic |
CTGTAGATTCCATTAAGGAT+AGG | 0.490620 | 8.4:+16105466 | None:intergenic |
GTCAACAATGTGCTCACAAA+TGG | 0.491756 | 8.4:+16106762 | None:intergenic |
CATTAGGTTCTTTGACCGTC+GGG | 0.491868 | 8.4:-16114595 | MS.gene060573:intron |
GTACAGCTGGAATGGGAAAA+CGG | 0.492057 | 8.4:-16112833 | MS.gene060573:CDS |
AATAGCCCGTGATCTACTCT+TGG | 0.492191 | 8.4:-16113543 | MS.gene060573:CDS |
AATCTTCAGAAGCGAAAAGC+TGG | 0.492681 | 8.4:-16112657 | MS.gene060573:CDS |
GATCTAACTAAGAGACTACT+TGG | 0.493244 | 8.4:-16113323 | MS.gene060573:CDS |
TGTAGATTCCATTAAGGATA+GGG | 0.494952 | 8.4:+16105467 | None:intergenic |
ATCAATATTAAAAGGAGCTA+CGG | 0.496095 | 8.4:-16107981 | MS.gene060573:CDS |
AATAATAACAGGGCCTAACA+TGG | 0.496952 | 8.4:-16110648 | MS.gene060573:CDS |
CCATGGACAAAACGCAAGCT+TGG | 0.498752 | 8.4:-16104804 | MS.gene060573:CDS |
CACGAATGTGGAGTCAGCAT+TGG | 0.501115 | 8.4:-16113270 | MS.gene060573:CDS |
CCTCAGATCTTGGCGAAGCA+CGG | 0.502927 | 8.4:+16112722 | None:intergenic |
CGAGTTTAAGACTAGAGATC+TGG | 0.503656 | 8.4:-16113129 | MS.gene060573:CDS |
AGGACCTGTACAGCTGGAAT+GGG | 0.503753 | 8.4:-16112840 | MS.gene060573:CDS |
GTTGAAAGATAATTTAGAGA+AGG | 0.504906 | 8.4:-16104767 | MS.gene060573:CDS |
CCGACGGTCAAAGAACCTAA+TGG | 0.506805 | 8.4:+16114596 | None:intergenic |
ACATTAAAAGTGCTCTGGAC+AGG | 0.509244 | 8.4:-16111769 | MS.gene060573:CDS |
GCTCTGAGACAGTTGGGTAG+TGG | 0.510429 | 8.4:-16113614 | MS.gene060573:CDS |
TGCGAAACCTAATTTGAGCT+CGG | 0.513446 | 8.4:+16115400 | None:intergenic |
AGTGCTCTGGACAGGTATGA+TGG | 0.516158 | 8.4:-16111761 | MS.gene060573:CDS |
TCTTGGCTTTAATAGGATGA+AGG | 0.516348 | 8.4:-16110863 | MS.gene060573:intron |
ATGAATAGGACCTGTACAGC+TGG | 0.516778 | 8.4:-16112846 | MS.gene060573:CDS |
CTAAGGCGACAACACTTTCA+GGG | 0.519339 | 8.4:+16105532 | None:intergenic |
CTGGCCAAAAGCGGTACACC+TGG | 0.519878 | 8.4:-16113467 | MS.gene060573:CDS |
TACTACTGCTCTGAGACAGT+TGG | 0.522433 | 8.4:-16113621 | MS.gene060573:CDS |
CCATACACTTGAGGTCTATG+AGG | 0.527362 | 8.4:-16113510 | MS.gene060573:CDS |
ATCATTGATGAGTTGGGACG+TGG | 0.529738 | 8.4:-16107944 | MS.gene060573:CDS |
GTGATATGAAGGTCTCGCTT+GGG | 0.530670 | 8.4:-16106785 | MS.gene060573:intron |
CAACTCATCAATGATTATCA+AGG | 0.531873 | 8.4:+16107952 | None:intergenic |
GGTACCGATGAGGTGATGTC+AGG | 0.533662 | 8.4:+16111008 | None:intergenic |
ACTACTGCTCTGAGACAGTT+GGG | 0.534003 | 8.4:-16113620 | MS.gene060573:CDS |
AAACTCTGATCACAAGCTCC+TGG | 0.536283 | 8.4:+16105585 | None:intergenic |
TCCATTAAGGATAGGGCAGA+AGG | 0.536610 | 8.4:+16105474 | None:intergenic |
ATGCAGTCAGCTCATGAAAG+TGG | 0.540810 | 8.4:+16106710 | None:intergenic |
AATTTGCACCTGGTGCTTTG+GGG | 0.541201 | 8.4:-16113040 | MS.gene060573:CDS |
AAGTGGGTTGCAAATAAAGT+AGG | 0.541878 | 8.4:+16106727 | None:intergenic |
GATGTCTAAAGGGGCCGTAA+AGG | 0.542377 | 8.4:-16104869 | MS.gene060573:CDS |
CAAGCTAACTATGCTATACA+AGG | 0.546684 | 8.4:-16106596 | MS.gene060573:intron |
TGTGATATGAAGGTCTCGCT+TGG | 0.548487 | 8.4:-16106786 | MS.gene060573:intron |
GTGGCAAATCAACATTCATC+CGG | 0.548699 | 8.4:-16110625 | MS.gene060573:CDS |
CAGTCTTGAGCCTCCACACA+AGG | 0.548981 | 8.4:+16110812 | None:intergenic |
AGCAGTAGTAGTGTGATAGT+AGG | 0.549498 | 8.4:+16113634 | None:intergenic |
GCAATCACGAACAGATATGC+TGG | 0.549634 | 8.4:+16110311 | None:intergenic |
AATATCAGACATTGAGCGAC+TGG | 0.550956 | 8.4:-16112685 | MS.gene060573:CDS |
TACAGGAAGATCAAGATCAA+TGG | 0.551026 | 8.4:+16111511 | None:intergenic |
TCTACTTTCTAGGTTGAACC+AGG | 0.551501 | 8.4:-16105603 | MS.gene060573:intron |
GTATTGGAAACCCGTAAAGA+TGG | 0.551808 | 8.4:-16111383 | MS.gene060573:CDS |
TCAGGTCTTGTATAGGGAGT+AGG | 0.552308 | 8.4:+16111026 | None:intergenic |
TAAGATATTAAGTGCCCTCA+TGG | 0.552816 | 8.4:+16112914 | None:intergenic |
TTTGTAACTTATCAGATCAG+AGG | 0.555246 | 8.4:-16110686 | MS.gene060573:intron |
CAAATCAACATTCATCCGGC+AGG | 0.557847 | 8.4:-16110621 | MS.gene060573:intron |
CCCCGTTCTCTAGATGATCA+AGG | 0.558606 | 8.4:+16111633 | None:intergenic |
ATTTGCACCTGGTGCTTTGG+GGG | 0.559263 | 8.4:-16113039 | MS.gene060573:CDS |
TGCTTTGCCACTAGAAACCA+TGG | 0.560545 | 8.4:-16104821 | MS.gene060573:CDS |
ATGAAAATTATACTCTGCGT+AGG | 0.563016 | 8.4:-16112974 | MS.gene060573:CDS |
CACTACACTATCTGGACTGA+AGG | 0.564158 | 8.4:-16111585 | MS.gene060573:CDS |
GACCTTGATCATCTAGAGAA+CGG | 0.564291 | 8.4:-16111635 | MS.gene060573:CDS |
TCATAAGCAAATTGTTGGTG+TGG | 0.571629 | 8.4:-16106659 | MS.gene060573:CDS |
TGTCGCCTTAGCTAGAGAAA+AGG | 0.572310 | 8.4:-16105520 | MS.gene060573:CDS |
TTGTGTGGAGGCTCAAGACT+GGG | 0.578627 | 8.4:-16110810 | MS.gene060573:CDS |
GTAGATTCCAAGCAAGCACA+AGG | 0.580887 | 8.4:-16115251 | MS.gene060573:intron |
TCTGGATTTGAATTTGCACC+TGG | 0.584665 | 8.4:-16113050 | MS.gene060573:CDS |
TTCTCTCCAAGAGTAGATCA+CGG | 0.584948 | 8.4:+16113537 | None:intergenic |
GATCTTGGAAGGCTTGTCAA+AGG | 0.585706 | 8.4:-16113101 | MS.gene060573:CDS |
GATATGCTGGCTTTGTCACA+TGG | 0.587527 | 8.4:+16110324 | None:intergenic |
ATCAACAAAGCCTAATCCAA+TGG | 0.588140 | 8.4:+16113343 | None:intergenic |
TGACAGTCACTTCACGAATG+TGG | 0.589108 | 8.4:-16113282 | MS.gene060573:CDS |
CCGTGCTTCGCCAAGATCTG+AGG | 0.590083 | 8.4:-16112722 | MS.gene060573:CDS |
TGCAGTCAGCTCATGAAAGT+GGG | 0.590382 | 8.4:+16106711 | None:intergenic |
TAAGACTAGAGATCTGGTAC+AGG | 0.591031 | 8.4:-16113123 | MS.gene060573:CDS |
GAAGACACTTACATCAGGTA+GGG | 0.591483 | 8.4:+16115208 | None:intergenic |
TGTTTGTGTTACAGGATCCG+AGG | 0.593285 | 8.4:-16114620 | MS.gene060573:intron |
GTTAGATTCTGCAGCCATGA+GGG | 0.594118 | 8.4:-16112928 | MS.gene060573:CDS |
AACTGGCAACTGGCCAAAAG+CGG | 0.596553 | 8.4:-16113476 | MS.gene060573:CDS |
TCAAAACTGCCAATATTACC+AGG | 0.600342 | 8.4:+16113449 | None:intergenic |
AATGTGGAGTCAGCATTGGT+TGG | 0.600843 | 8.4:-16113266 | MS.gene060573:CDS |
AAAGATTTGGAGCTATGGAC+TGG | 0.601557 | 8.4:-16111704 | MS.gene060573:CDS |
ATGTAAACGATATTAACTCC+AGG | 0.602595 | 8.4:-16112776 | MS.gene060573:CDS |
AAACGATATTAACTCCAGGT+TGG | 0.605439 | 8.4:-16112772 | MS.gene060573:CDS |
TGTGATGTGCTGACTAAATG+TGG | 0.607909 | 8.4:-16113179 | MS.gene060573:CDS |
CATTTCAGCATCTTTCTCTG+AGG | 0.609483 | 8.4:-16111255 | MS.gene060573:intron |
TGCTTGTACTACATCCAACC+TGG | 0.613234 | 8.4:+16112758 | None:intergenic |
TCAATGGATGAAAACTTCGA+CGG | 0.613455 | 8.4:-16115440 | MS.gene060573:CDS |
TTCCACGCTCAATTGGCACA+AGG | 0.613586 | 8.4:+16113225 | None:intergenic |
CTTAATGGAATCTACAGAAG+AGG | 0.617510 | 8.4:-16105460 | MS.gene060573:intron |
TCAAAGAACCTAATGGCCCT+CGG | 0.618346 | 8.4:+16114603 | None:intergenic |
AAGACCTGACATCACCTCAT+CGG | 0.618662 | 8.4:-16111012 | MS.gene060573:intron |
TTTCCAGTGTGAGTGTCAGT+AGG | 0.619294 | 8.4:-16113580 | MS.gene060573:CDS |
ATCTGGTACAGGATCTTGGA+AGG | 0.620729 | 8.4:-16113112 | MS.gene060573:CDS |
CAGATCTCTAGTCTTAAACT+CGG | 0.621660 | 8.4:+16113130 | None:intergenic |
CGAAACCTAATTTGAGCTCG+GGG | 0.626639 | 8.4:+16115402 | None:intergenic |
GTTTGTGTTACAGGATCCGA+GGG | 0.629304 | 8.4:-16114619 | MS.gene060573:intron |
AGAAGACACTTACATCAGGT+AGG | 0.630411 | 8.4:+16115207 | None:intergenic |
AGGTAGCAGACACCCTTGTG+TGG | 0.631996 | 8.4:-16110825 | MS.gene060573:CDS |
TCTCTCCAAGAGTAGATCAC+GGG | 0.633717 | 8.4:+16113538 | None:intergenic |
GTTCCTACTGACACTCACAC+TGG | 0.635407 | 8.4:+16113577 | None:intergenic |
CATACACTTGAGGTCTATGA+GGG | 0.635742 | 8.4:-16113509 | MS.gene060573:CDS |
GAATGATGCATTCTCACCGT+GGG | 0.638615 | 8.4:+16113667 | None:intergenic |
CAGGATTACTATACCGCCCA+CGG | 0.638679 | 8.4:-16113683 | MS.gene060573:CDS |
TGCCTTGTGCCAATTGAGCG+TGG | 0.641065 | 8.4:-16113227 | MS.gene060573:CDS |
TGATGCATTCTCACCGTGGG+CGG | 0.644284 | 8.4:+16113670 | None:intergenic |
TAGCAGACACCCTTGTGTGG+AGG | 0.644987 | 8.4:-16110822 | MS.gene060573:CDS |
GGTTAGATTCTGCAGCCATG+AGG | 0.646770 | 8.4:-16112929 | MS.gene060573:CDS |
GAGAACAGACCATACACTTG+AGG | 0.649486 | 8.4:-16113519 | MS.gene060573:CDS |
GAAAACGGCTATTGCACATG+TGG | 0.651889 | 8.4:-16112818 | MS.gene060573:CDS |
ATAATAACAGGGCCTAACAT+GGG | 0.653591 | 8.4:-16110647 | MS.gene060573:CDS |
TAAGGCATTAAAGTTAGACA+AGG | 0.655889 | 8.4:-16111486 | MS.gene060573:CDS |
CCTTGATCATCTAGAGAACG+GGG | 0.660816 | 8.4:-16111633 | MS.gene060573:CDS |
TGTAGTACAAGCATTTGTAG+AGG | 0.662304 | 8.4:-16112748 | MS.gene060573:CDS |
AACTGATGAGATGTCTAAAG+GGG | 0.665562 | 8.4:-16104878 | MS.gene060573:CDS |
ATCTAACTAAGAGACTACTT+GGG | 0.666797 | 8.4:-16113322 | MS.gene060573:CDS |
ATAACAGGGCCTAACATGGG+TGG | 0.666933 | 8.4:-16110644 | MS.gene060573:CDS |
GTTGGTTTCAAATAATAACA+GGG | 0.674949 | 8.4:-16110658 | MS.gene060573:CDS |
GGTTTCCAATACGATAAACT+GGG | 0.676046 | 8.4:+16111394 | None:intergenic |
TGAATGATGCATTCTCACCG+TGG | 0.683993 | 8.4:+16113666 | None:intergenic |
TCGTGAAGTGACTGTCATCG+AGG | 0.692754 | 8.4:+16113288 | None:intergenic |
AAGGCATTAAAGTTAGACAA+GGG | 0.698808 | 8.4:-16111485 | MS.gene060573:CDS |
ACAATCTTGACAGTTACATG+AGG | 0.699774 | 8.4:-16112950 | MS.gene060573:CDS |
TAGATTCCAAGCAAGCACAA+GGG | 0.700123 | 8.4:-16115250 | MS.gene060573:CDS |
AGTCTTGAGCCTCCACACAA+GGG | 0.709256 | 8.4:+16110813 | None:intergenic |
CTATTAACGAGGTACCGATG+AGG | 0.733890 | 8.4:+16110998 | None:intergenic |
CGTGGCACATCAACTTACGA+CGG | 0.739282 | 8.4:-16107926 | MS.gene060573:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 16104732 | 16115459 | 16104732 | ID=MS.gene060573 |
chr8.4 | mRNA | 16104732 | 16115459 | 16104732 | ID=MS.gene060573.t1;Parent=MS.gene060573 |
chr8.4 | exon | 16115408 | 16115459 | 16115408 | ID=MS.gene060573.t1.exon1;Parent=MS.gene060573.t1 |
chr8.4 | CDS | 16115408 | 16115459 | 16115408 | ID=cds.MS.gene060573.t1;Parent=MS.gene060573.t1 |
chr8.4 | exon | 16115220 | 16115269 | 16115220 | ID=MS.gene060573.t1.exon2;Parent=MS.gene060573.t1 |
chr8.4 | CDS | 16115220 | 16115269 | 16115220 | ID=cds.MS.gene060573.t1;Parent=MS.gene060573.t1 |
chr8.4 | exon | 16114596 | 16114628 | 16114596 | ID=MS.gene060573.t1.exon3;Parent=MS.gene060573.t1 |
chr8.4 | CDS | 16114596 | 16114628 | 16114596 | ID=cds.MS.gene060573.t1;Parent=MS.gene060573.t1 |
chr8.4 | exon | 16112629 | 16113702 | 16112629 | ID=MS.gene060573.t1.exon4;Parent=MS.gene060573.t1 |
chr8.4 | CDS | 16112629 | 16113702 | 16112629 | ID=cds.MS.gene060573.t1;Parent=MS.gene060573.t1 |
chr8.4 | exon | 16111256 | 16111810 | 16111256 | ID=MS.gene060573.t1.exon5;Parent=MS.gene060573.t1 |
chr8.4 | CDS | 16111256 | 16111810 | 16111256 | ID=cds.MS.gene060573.t1;Parent=MS.gene060573.t1 |
chr8.4 | exon | 16111013 | 16111123 | 16111013 | ID=MS.gene060573.t1.exon6;Parent=MS.gene060573.t1 |
chr8.4 | CDS | 16111013 | 16111123 | 16111013 | ID=cds.MS.gene060573.t1;Parent=MS.gene060573.t1 |
chr8.4 | exon | 16110781 | 16110870 | 16110781 | ID=MS.gene060573.t1.exon7;Parent=MS.gene060573.t1 |
chr8.4 | CDS | 16110781 | 16110870 | 16110781 | ID=cds.MS.gene060573.t1;Parent=MS.gene060573.t1 |
chr8.4 | exon | 16110622 | 16110693 | 16110622 | ID=MS.gene060573.t1.exon8;Parent=MS.gene060573.t1 |
chr8.4 | CDS | 16110622 | 16110693 | 16110622 | ID=cds.MS.gene060573.t1;Parent=MS.gene060573.t1 |
chr8.4 | exon | 16110278 | 16110388 | 16110278 | ID=MS.gene060573.t1.exon9;Parent=MS.gene060573.t1 |
chr8.4 | CDS | 16110278 | 16110388 | 16110278 | ID=cds.MS.gene060573.t1;Parent=MS.gene060573.t1 |
chr8.4 | exon | 16107921 | 16108047 | 16107921 | ID=MS.gene060573.t1.exon10;Parent=MS.gene060573.t1 |
chr8.4 | CDS | 16107921 | 16108047 | 16107921 | ID=cds.MS.gene060573.t1;Parent=MS.gene060573.t1 |
chr8.4 | exon | 16106597 | 16106796 | 16106597 | ID=MS.gene060573.t1.exon11;Parent=MS.gene060573.t1 |
chr8.4 | CDS | 16106597 | 16106796 | 16106597 | ID=cds.MS.gene060573.t1;Parent=MS.gene060573.t1 |
chr8.4 | exon | 16105461 | 16105613 | 16105461 | ID=MS.gene060573.t1.exon12;Parent=MS.gene060573.t1 |
chr8.4 | CDS | 16105461 | 16105613 | 16105461 | ID=cds.MS.gene060573.t1;Parent=MS.gene060573.t1 |
chr8.4 | exon | 16104732 | 16104929 | 16104732 | ID=MS.gene060573.t1.exon13;Parent=MS.gene060573.t1 |
chr8.4 | CDS | 16104732 | 16104929 | 16104732 | ID=cds.MS.gene060573.t1;Parent=MS.gene060573.t1 |
Gene Sequence |
Protein sequence |