Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044567.t1 | XP_013458054.1 | 98.1 | 825 | 16 | 0 | 1 | 825 | 1 | 825 | 0.00E+00 | 1598.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044567.t1 | O24617 | 76.0 | 825 | 195 | 2 | 1 | 825 | 1 | 822 | 0.0e+00 | 1279.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044567.t1 | A0A072V1T7 | 98.1 | 825 | 16 | 0 | 1 | 825 | 1 | 825 | 0.0e+00 | 1598.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044567.t1 | MTR_4g111945 | 98.061 | 825 | 16 | 0 | 1 | 825 | 1 | 825 | 0.0 | 1675 |
MS.gene044567.t1 | MTR_1g100683 | 26.786 | 728 | 451 | 23 | 159 | 825 | 254 | 960 | 9.70e-51 | 193 |
MS.gene044567.t1 | MTR_1g100683 | 26.786 | 728 | 451 | 23 | 159 | 825 | 254 | 960 | 9.70e-51 | 193 |
MS.gene044567.t1 | MTR_7g109470 | 29.151 | 542 | 302 | 18 | 294 | 786 | 643 | 1151 | 2.92e-43 | 171 |
MS.gene044567.t1 | MTR_5g093110 | 27.829 | 539 | 327 | 17 | 285 | 785 | 175 | 689 | 4.39e-41 | 162 |
MS.gene044567.t1 | MTR_6g086270 | 41.202 | 233 | 109 | 6 | 581 | 786 | 789 | 1020 | 3.75e-40 | 160 |
MS.gene044567.t1 | MTR_6g086270 | 26.087 | 391 | 232 | 15 | 124 | 479 | 435 | 803 | 5.57e-15 | 80.1 |
MS.gene044567.t1 | MTR_1g045670 | 32.558 | 172 | 103 | 4 | 664 | 831 | 766 | 928 | 7.33e-15 | 79.7 |
MS.gene044567.t1 | MTR_5g068600 | 31.724 | 145 | 97 | 2 | 649 | 792 | 318 | 461 | 1.53e-13 | 75.1 |
MS.gene044567.t1 | MTR_5g068600 | 31.724 | 145 | 97 | 2 | 649 | 792 | 418 | 561 | 1.69e-13 | 75.1 |
MS.gene044567.t1 | MTR_4g088920 | 27.586 | 145 | 102 | 3 | 649 | 792 | 414 | 556 | 4.69e-12 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044567.t1 | AT3G18524 | 76.000 | 825 | 195 | 2 | 1 | 825 | 1 | 822 | 0.0 | 1321 |
MS.gene044567.t1 | AT4G25540 | 27.208 | 566 | 357 | 11 | 281 | 810 | 406 | 952 | 1.24e-49 | 190 |
MS.gene044567.t1 | AT4G17380 | 30.410 | 536 | 308 | 19 | 294 | 789 | 164 | 674 | 2.80e-49 | 186 |
MS.gene044567.t1 | AT4G17380 | 30.410 | 536 | 308 | 19 | 294 | 789 | 164 | 674 | 9.22e-49 | 186 |
MS.gene044567.t1 | AT3G24495 | 41.593 | 226 | 107 | 6 | 580 | 786 | 753 | 972 | 2.60e-40 | 161 |
MS.gene044567.t1 | AT3G24495 | 25.135 | 370 | 227 | 11 | 120 | 457 | 377 | 728 | 1.31e-13 | 75.5 |
MS.gene044567.t1 | AT3G20475 | 27.664 | 535 | 321 | 20 | 291 | 785 | 179 | 687 | 5.72e-40 | 159 |
MS.gene044567.t1 | AT3G20475 | 27.664 | 535 | 321 | 20 | 291 | 785 | 179 | 687 | 6.28e-40 | 159 |
MS.gene044567.t1 | AT3G20475 | 27.664 | 535 | 321 | 20 | 291 | 785 | 179 | 687 | 1.26e-39 | 158 |
MS.gene044567.t1 | AT4G02070 | 35.039 | 254 | 158 | 4 | 540 | 786 | 946 | 1199 | 1.49e-35 | 146 |
MS.gene044567.t1 | AT4G02070 | 35.039 | 254 | 158 | 4 | 540 | 786 | 949 | 1202 | 1.52e-35 | 146 |
MS.gene044567.t1 | AT5G54090 | 34.694 | 147 | 94 | 2 | 649 | 794 | 424 | 569 | 1.99e-17 | 87.8 |
MS.gene044567.t1 | AT3G24320 | 36.000 | 125 | 79 | 1 | 664 | 788 | 765 | 888 | 5.95e-15 | 80.1 |
MS.gene044567.t1 | AT3G24320 | 36.000 | 125 | 79 | 1 | 664 | 788 | 520 | 643 | 6.56e-15 | 79.7 |
MS.gene044567.t1 | AT3G24495 | 25.135 | 370 | 227 | 11 | 120 | 457 | 377 | 728 | 2.35e-13 | 74.7 |
Find 166 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACTTAACTTCCGTGAAAA+TGG | 0.217898 | 8.1:-14221003 | MS.gene044567:CDS |
GAGCAAATATTTGAAAGATT+TGG | 0.230431 | 8.1:-14218619 | MS.gene044567:CDS |
GAAACTTCATCAATATTAAA+AGG | 0.253143 | 8.1:-14214884 | MS.gene044567:CDS |
GTTACTAAGCTTTGCTGATT+TGG | 0.264775 | 8.1:-14217962 | MS.gene044567:CDS |
GAATTTGCACCTGGTGCTTT+GGG | 0.265294 | 8.1:-14220673 | MS.gene044567:CDS |
CAAGCTCAATAAATTTGTTT+AGG | 0.289581 | 8.1:+14218574 | None:intergenic |
AAACTCCCCGAGCTCAAATT+AGG | 0.289779 | 8.1:-14223002 | MS.gene044567:intron |
ACATGTTGTTAAACTTTATC+AGG | 0.302362 | 8.1:-14220260 | MS.gene044567:intron |
AGTTGGTTTCAAATAATAAC+AGG | 0.302730 | 8.1:-14217561 | MS.gene044567:CDS |
TAAACTTCACTCCATCTTTA+CGG | 0.311723 | 8.1:+14218274 | None:intergenic |
GGGTTTCCAATACGATAAAC+TGG | 0.314642 | 8.1:+14218295 | None:intergenic |
ATTACCAGGTGTACCGCTTT+TGG | 0.318900 | 8.1:+14221095 | None:intergenic |
TTAGACAAGGGAACGCAATT+TGG | 0.319799 | 8.1:-14218375 | MS.gene044567:CDS |
AGCTGAATTGATTTCCGAAT+TGG | 0.322151 | 8.1:-14217989 | MS.gene044567:CDS |
TGAATTTGCACCTGGTGCTT+TGG | 0.325654 | 8.1:-14220674 | MS.gene044567:CDS |
AGAAGGAAGAGCCGAAAATA+AGG | 0.327757 | 8.1:-14218332 | MS.gene044567:CDS |
ACATCAACTTACGACGGATT+TGG | 0.329652 | 8.1:-14214815 | MS.gene044567:intron |
AATGGGTGCACCATTGGATT+AGG | 0.347556 | 8.1:-14220985 | MS.gene044567:CDS |
ACCTTGATCATCTAGAGAAC+GGG | 0.350403 | 8.1:-14218536 | MS.gene044567:CDS |
TTCAAGCATTTCTTGCATAA+AGG | 0.352158 | 8.1:+14214904 | None:intergenic |
GTTTATTTGGTCTCATGAAT+AGG | 0.354518 | 8.1:-14220492 | MS.gene044567:CDS |
CTTACAAGCTTGCAATCATT+TGG | 0.355956 | 8.1:+14217678 | None:intergenic |
AAACTTCACTCCATCTTTAC+GGG | 0.362278 | 8.1:+14218275 | None:intergenic |
ACTGCATTAGCCGATGAAAA+TGG | 0.364221 | 8.1:-14213870 | MS.gene044567:CDS |
GTTGATTTGCCACCCATGTT+AGG | 0.365141 | 8.1:+14217537 | None:intergenic |
AGTTATGACACTACACTATC+TGG | 0.365622 | 8.1:-14218495 | MS.gene044567:CDS |
TCAGATGCTGCCTCAGATCT+TGG | 0.368959 | 8.1:+14220344 | None:intergenic |
ATATCGTTTACATCTAATAA+TGG | 0.369553 | 8.1:+14220418 | None:intergenic |
CAGAAACCCTTGTGCTTGCT+TGG | 0.383089 | 8.1:+14222839 | None:intergenic |
CTTGTGTGGAGGCTCAAGAC+TGG | 0.384137 | 8.1:-14217713 | MS.gene044567:CDS |
CGTGAAAATGGGTGCACCAT+TGG | 0.390296 | 8.1:-14220991 | MS.gene044567:CDS |
CAACACCCAGTTTATCGTAT+TGG | 0.394945 | 8.1:-14218301 | MS.gene044567:CDS |
GCAGTTCAAGATTTAGTGTC+TGG | 0.395743 | 8.1:-14220700 | MS.gene044567:CDS |
AGTAGTGTGATAGTAGGTTT+TGG | 0.401446 | 8.1:+14221272 | None:intergenic |
AGCGGTACACCTGGTAATAT+TGG | 0.403040 | 8.1:-14221090 | MS.gene044567:CDS |
AGTGACAGCGCAACAACAAC+TGG | 0.407997 | 8.1:+14221021 | None:intergenic |
AGAGATCTGGTACAGGATCT+TGG | 0.409711 | 8.1:-14220748 | MS.gene044567:CDS |
ATGAGGGCAGCAGCTCTAAC+TGG | 0.418559 | 8.1:-14221125 | MS.gene044567:CDS |
CAGCAGCTCTAACTGGCAAC+TGG | 0.425469 | 8.1:-14221118 | MS.gene044567:CDS |
GAGTCAGCATTGGTTGGTCT+TGG | 0.426449 | 8.1:-14220892 | MS.gene044567:CDS |
AACTTTAATGCCTTATCTAC+AGG | 0.429470 | 8.1:+14218396 | None:intergenic |
GGTGATGTCAGGTCTTGTAT+AGG | 0.429489 | 8.1:+14217921 | None:intergenic |
GTGATGTCAGGTCTTGTATA+GGG | 0.433096 | 8.1:+14217922 | None:intergenic |
TTGATAATCATTGATGAGTT+GGG | 0.441039 | 8.1:-14214845 | MS.gene044567:CDS |
TACAGGATCCGAGGGCCATT+AGG | 0.444580 | 8.1:-14222217 | MS.gene044567:intron |
GCTTAGTAACACGTCCAATT+CGG | 0.446279 | 8.1:+14217975 | None:intergenic |
CTTGATAATCATTGATGAGT+TGG | 0.451893 | 8.1:-14214846 | MS.gene044567:CDS |
CACTTAACTTCCGTGAAAAT+GGG | 0.453131 | 8.1:-14221002 | MS.gene044567:CDS |
GATACTCATCAGCAAATTGT+TGG | 0.456102 | 8.1:-14213840 | MS.gene044567:CDS |
GCGAAACCTAATTTGAGCTC+GGG | 0.459559 | 8.1:+14222996 | None:intergenic |
TAGGACCTGTACAGCTGGAA+TGG | 0.468873 | 8.1:-14220473 | MS.gene044567:CDS |
ATTTGAAAGATTTGGAGCTA+TGG | 0.471971 | 8.1:-14218611 | MS.gene044567:CDS |
TCTTGATCTTCCTGTAGATA+AGG | 0.474885 | 8.1:-14218406 | MS.gene044567:CDS |
GCCTTACATTAAAAGTGCTC+TGG | 0.478506 | 8.1:-14218676 | MS.gene044567:CDS |
CCATTAGGTTCTTTGACCGT+CGG | 0.481973 | 8.1:-14222202 | MS.gene044567:CDS |
CCTCATAGACCTCAAGTGTA+TGG | 0.485875 | 8.1:+14221142 | None:intergenic |
GTCAACAATGTGCTCACAAA+TGG | 0.491756 | 8.1:+14213938 | None:intergenic |
CATTAGGTTCTTTGACCGTC+GGG | 0.491868 | 8.1:-14222201 | MS.gene044567:intron |
GTACAGCTGGAATGGGAAAA+CGG | 0.492057 | 8.1:-14220465 | MS.gene044567:CDS |
AATAGCCCGTGATCTACTCT+TGG | 0.492191 | 8.1:-14221175 | MS.gene044567:CDS |
AATCTTCAGAAGCGAAAAGC+TGG | 0.492681 | 8.1:-14220289 | MS.gene044567:CDS |
GATCTAACTAAGAGACTACT+TGG | 0.493244 | 8.1:-14220955 | MS.gene044567:CDS |
ATCAATATTAAAAGGAGCTA+CGG | 0.496095 | 8.1:-14214876 | MS.gene044567:CDS |
AATAATAACAGGGCCTAACA+TGG | 0.496952 | 8.1:-14217550 | MS.gene044567:CDS |
CACGAATGTGGAGTCAGCAT+TGG | 0.501115 | 8.1:-14220902 | MS.gene044567:CDS |
CCTCAGATCTTGGCGAAGCA+CGG | 0.502927 | 8.1:+14220354 | None:intergenic |
CGAGTTTAAGACTAGAGATC+TGG | 0.503656 | 8.1:-14220761 | MS.gene044567:CDS |
AGGACCTGTACAGCTGGAAT+GGG | 0.503753 | 8.1:-14220472 | MS.gene044567:CDS |
CCGACGGTCAAAGAACCTAA+TGG | 0.506805 | 8.1:+14222202 | None:intergenic |
ACATTAAAAGTGCTCTGGAC+AGG | 0.509244 | 8.1:-14218671 | MS.gene044567:CDS |
GCTCTGAGACAGTTGGGTAG+TGG | 0.510429 | 8.1:-14221246 | MS.gene044567:CDS |
TGCGAAACCTAATTTGAGCT+CGG | 0.513446 | 8.1:+14222995 | None:intergenic |
AGTGCTCTGGACAGGTATGA+TGG | 0.516158 | 8.1:-14218663 | MS.gene044567:CDS |
TCTTGGCTTTAATAGGATGA+AGG | 0.516348 | 8.1:-14217765 | MS.gene044567:intron |
ATGAATAGGACCTGTACAGC+TGG | 0.516778 | 8.1:-14220478 | MS.gene044567:CDS |
CTGGCCAAAAGCGGTACACC+TGG | 0.519878 | 8.1:-14221099 | MS.gene044567:CDS |
TACTACTGCTCTGAGACAGT+TGG | 0.522433 | 8.1:-14221253 | MS.gene044567:CDS |
CCATACACTTGAGGTCTATG+AGG | 0.527362 | 8.1:-14221142 | MS.gene044567:CDS |
ATCATTGATGAGTTGGGACG+TGG | 0.529738 | 8.1:-14214839 | MS.gene044567:CDS |
GTGATATGAAGGTCTCGCTT+GGG | 0.530670 | 8.1:-14213961 | MS.gene044567:intron |
CAACTCATCAATGATTATCA+AGG | 0.531873 | 8.1:+14214847 | None:intergenic |
TGTGATGTGTTGACTAAATG+TGG | 0.532942 | 8.1:-14220811 | MS.gene044567:CDS |
GGTACCGATGAGGTGATGTC+AGG | 0.533662 | 8.1:+14217910 | None:intergenic |
ACTACTGCTCTGAGACAGTT+GGG | 0.534003 | 8.1:-14221252 | MS.gene044567:CDS |
ATGCAGTCAGCTCATGAAAG+TGG | 0.540810 | 8.1:+14213886 | None:intergenic |
AATTTGCACCTGGTGCTTTG+GGG | 0.541201 | 8.1:-14220672 | MS.gene044567:CDS |
AAGTGGGTTGCAAATAAAGT+AGG | 0.541878 | 8.1:+14213903 | None:intergenic |
CAAGCTAACTATGCTATACA+AGG | 0.546684 | 8.1:-14213772 | MS.gene044567:intron |
TGTGATATGAAGGTCTCGCT+TGG | 0.548487 | 8.1:-14213962 | MS.gene044567:intron |
GTGGCAAATCAACATTCATC+CGG | 0.548699 | 8.1:-14217527 | MS.gene044567:CDS |
CAGTCTTGAGCCTCCACACA+AGG | 0.548981 | 8.1:+14217714 | None:intergenic |
AGCAGTAGTAGTGTGATAGT+AGG | 0.549498 | 8.1:+14221266 | None:intergenic |
GCAATCACGAACAGATATGC+TGG | 0.549634 | 8.1:+14217213 | None:intergenic |
AATATCAGACATTGAGCGAC+TGG | 0.550956 | 8.1:-14220317 | MS.gene044567:CDS |
TACAGGAAGATCAAGATCAA+TGG | 0.551026 | 8.1:+14218413 | None:intergenic |
GTATTGGAAACCCGTAAAGA+TGG | 0.551808 | 8.1:-14218285 | MS.gene044567:CDS |
TCAGGTCTTGTATAGGGAGT+AGG | 0.552308 | 8.1:+14217928 | None:intergenic |
TAAGATATTAAGTGCCCTCA+TGG | 0.552816 | 8.1:+14220546 | None:intergenic |
TTTGTAACTTATCAGATCAG+AGG | 0.555246 | 8.1:-14217588 | MS.gene044567:intron |
CAAATCAACATTCATCCGGC+AGG | 0.557847 | 8.1:-14217523 | MS.gene044567:intron |
CCCCGTTCTCTAGATGATCA+AGG | 0.558606 | 8.1:+14218535 | None:intergenic |
ATTTGCACCTGGTGCTTTGG+GGG | 0.559263 | 8.1:-14220671 | MS.gene044567:CDS |
ATGAAAATTATACTCTGCGT+AGG | 0.563016 | 8.1:-14220606 | MS.gene044567:CDS |
CACTACACTATCTGGACTGA+AGG | 0.564158 | 8.1:-14218487 | MS.gene044567:CDS |
GACCTTGATCATCTAGAGAA+CGG | 0.564291 | 8.1:-14218537 | MS.gene044567:CDS |
TTGTGTGGAGGCTCAAGACT+GGG | 0.578627 | 8.1:-14217712 | MS.gene044567:CDS |
GTAGATTCCAAGCAAGCACA+AGG | 0.580887 | 8.1:-14222846 | MS.gene044567:intron |
TCTGGATTTGAATTTGCACC+TGG | 0.584665 | 8.1:-14220682 | MS.gene044567:CDS |
TTCTCTCCAAGAGTAGATCA+CGG | 0.584948 | 8.1:+14221169 | None:intergenic |
GATCTTGGAAGGCTTGTCAA+AGG | 0.585706 | 8.1:-14220733 | MS.gene044567:CDS |
GATATGCTGGCTTTGTCACA+TGG | 0.587527 | 8.1:+14217226 | None:intergenic |
ATCAACAAAGCCTAATCCAA+TGG | 0.588140 | 8.1:+14220975 | None:intergenic |
TCATCAGCAAATTGTTGGTG+TGG | 0.589022 | 8.1:-14213835 | MS.gene044567:CDS |
TGACAGTCACTTCACGAATG+TGG | 0.589108 | 8.1:-14220914 | MS.gene044567:CDS |
CCGTGCTTCGCCAAGATCTG+AGG | 0.590083 | 8.1:-14220354 | MS.gene044567:CDS |
TGCAGTCAGCTCATGAAAGT+GGG | 0.590382 | 8.1:+14213887 | None:intergenic |
TAAGACTAGAGATCTGGTAC+AGG | 0.591031 | 8.1:-14220755 | MS.gene044567:CDS |
GAAGACACTTACATCAGGTA+GGG | 0.591483 | 8.1:+14222803 | None:intergenic |
TGTTTGTGTTACAGGATCCG+AGG | 0.593285 | 8.1:-14222226 | MS.gene044567:intron |
GTTAGATTCTGCAGCCATGA+GGG | 0.594118 | 8.1:-14220560 | MS.gene044567:CDS |
AACTGGCAACTGGCCAAAAG+CGG | 0.596553 | 8.1:-14221108 | MS.gene044567:CDS |
TCAAAACTGCCAATATTACC+AGG | 0.600342 | 8.1:+14221081 | None:intergenic |
AATGTGGAGTCAGCATTGGT+TGG | 0.600843 | 8.1:-14220898 | MS.gene044567:CDS |
AAAGATTTGGAGCTATGGAC+TGG | 0.601557 | 8.1:-14218606 | MS.gene044567:CDS |
ATGTAAACGATATTAACTCC+AGG | 0.602595 | 8.1:-14220408 | MS.gene044567:CDS |
AAACGATATTAACTCCAGGT+TGG | 0.605439 | 8.1:-14220404 | MS.gene044567:CDS |
CATTTCAGCATCTTTCTCTG+AGG | 0.609483 | 8.1:-14218157 | MS.gene044567:intron |
TGCTTGTACTACATCCAACC+TGG | 0.613234 | 8.1:+14220390 | None:intergenic |
TCAATGGATGAAAACTTCGA+CGG | 0.613455 | 8.1:-14223035 | MS.gene044567:CDS |
TTCCACGCTCAATTGGCACA+AGG | 0.613586 | 8.1:+14220857 | None:intergenic |
TCAAAGAACCTAATGGCCCT+CGG | 0.618346 | 8.1:+14222209 | None:intergenic |
AAGACCTGACATCACCTCAT+CGG | 0.618662 | 8.1:-14217914 | MS.gene044567:intron |
TTTCCAGTGTGAGTGTCAGT+AGG | 0.619294 | 8.1:-14221212 | MS.gene044567:CDS |
ATCTGGTACAGGATCTTGGA+AGG | 0.620729 | 8.1:-14220744 | MS.gene044567:CDS |
CAGATCTCTAGTCTTAAACT+CGG | 0.621660 | 8.1:+14220762 | None:intergenic |
CGAAACCTAATTTGAGCTCG+GGG | 0.626639 | 8.1:+14222997 | None:intergenic |
GTTTGTGTTACAGGATCCGA+GGG | 0.629304 | 8.1:-14222225 | MS.gene044567:intron |
AGAAGACACTTACATCAGGT+AGG | 0.630411 | 8.1:+14222802 | None:intergenic |
TGTTGCATTCTCACCGTGGG+CGG | 0.630684 | 8.1:+14221302 | None:intergenic |
AGGTAGCAGACACCCTTGTG+TGG | 0.631996 | 8.1:-14217727 | MS.gene044567:CDS |
TCTCTCCAAGAGTAGATCAC+GGG | 0.633717 | 8.1:+14221170 | None:intergenic |
GTTCCTACTGACACTCACAC+TGG | 0.635407 | 8.1:+14221209 | None:intergenic |
CATACACTTGAGGTCTATGA+GGG | 0.635742 | 8.1:-14221141 | MS.gene044567:CDS |
GAATGTTGCATTCTCACCGT+GGG | 0.636595 | 8.1:+14221299 | None:intergenic |
CAGGATTACTATACCGCCCA+CGG | 0.638679 | 8.1:-14221315 | MS.gene044567:CDS |
TGCCTTGTGCCAATTGAGCG+TGG | 0.641065 | 8.1:-14220859 | MS.gene044567:CDS |
TAGCAGACACCCTTGTGTGG+AGG | 0.644987 | 8.1:-14217724 | MS.gene044567:CDS |
GGTTAGATTCTGCAGCCATG+AGG | 0.646770 | 8.1:-14220561 | MS.gene044567:CDS |
GAGAACAGACCATACACTTG+AGG | 0.649486 | 8.1:-14221151 | MS.gene044567:CDS |
GAAAACGGCTATTGCACATG+TGG | 0.651889 | 8.1:-14220450 | MS.gene044567:CDS |
ATAATAACAGGGCCTAACAT+GGG | 0.653591 | 8.1:-14217549 | MS.gene044567:CDS |
TAAGGCATTAAAGTTAGACA+AGG | 0.655889 | 8.1:-14218388 | MS.gene044567:CDS |
CCTTGATCATCTAGAGAACG+GGG | 0.660816 | 8.1:-14218535 | MS.gene044567:CDS |
TGTAGTACAAGCATTTGTAG+AGG | 0.662304 | 8.1:-14220380 | MS.gene044567:CDS |
ATCTAACTAAGAGACTACTT+GGG | 0.666797 | 8.1:-14220954 | MS.gene044567:CDS |
ATAACAGGGCCTAACATGGG+TGG | 0.666933 | 8.1:-14217546 | MS.gene044567:CDS |
GTTGGTTTCAAATAATAACA+GGG | 0.674949 | 8.1:-14217560 | MS.gene044567:CDS |
TGAATGTTGCATTCTCACCG+TGG | 0.675402 | 8.1:+14221298 | None:intergenic |
GGTTTCCAATACGATAAACT+GGG | 0.676046 | 8.1:+14218296 | None:intergenic |
TCGTGAAGTGACTGTCATCG+AGG | 0.692754 | 8.1:+14220920 | None:intergenic |
AAGGCATTAAAGTTAGACAA+GGG | 0.698808 | 8.1:-14218387 | MS.gene044567:CDS |
ACAATCTTGACAGTTACATG+AGG | 0.699774 | 8.1:-14220582 | MS.gene044567:CDS |
TAGATTCCAAGCAAGCACAA+GGG | 0.700123 | 8.1:-14222845 | MS.gene044567:CDS |
AGTCTTGAGCCTCCACACAA+GGG | 0.709256 | 8.1:+14217715 | None:intergenic |
CTATTAACGAGGTACCGATG+AGG | 0.733890 | 8.1:+14217900 | None:intergenic |
CGTGGCACATCAACTTACGA+CGG | 0.739282 | 8.1:-14214821 | MS.gene044567:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 14213443 | 14223054 | 14213443 | ID=MS.gene044567 |
chr8.1 | mRNA | 14213443 | 14223054 | 14213443 | ID=MS.gene044567.t1;Parent=MS.gene044567 |
chr8.1 | exon | 14223003 | 14223054 | 14223003 | ID=MS.gene044567.t1.exon1;Parent=MS.gene044567.t1 |
chr8.1 | CDS | 14223003 | 14223054 | 14223003 | ID=cds.MS.gene044567.t1;Parent=MS.gene044567.t1 |
chr8.1 | exon | 14222815 | 14222864 | 14222815 | ID=MS.gene044567.t1.exon2;Parent=MS.gene044567.t1 |
chr8.1 | CDS | 14222815 | 14222864 | 14222815 | ID=cds.MS.gene044567.t1;Parent=MS.gene044567.t1 |
chr8.1 | exon | 14222202 | 14222234 | 14222202 | ID=MS.gene044567.t1.exon3;Parent=MS.gene044567.t1 |
chr8.1 | CDS | 14222202 | 14222234 | 14222202 | ID=cds.MS.gene044567.t1;Parent=MS.gene044567.t1 |
chr8.1 | exon | 14220261 | 14221334 | 14220261 | ID=MS.gene044567.t1.exon4;Parent=MS.gene044567.t1 |
chr8.1 | CDS | 14220261 | 14221334 | 14220261 | ID=cds.MS.gene044567.t1;Parent=MS.gene044567.t1 |
chr8.1 | exon | 14218158 | 14218712 | 14218158 | ID=MS.gene044567.t1.exon5;Parent=MS.gene044567.t1 |
chr8.1 | CDS | 14218158 | 14218712 | 14218158 | ID=cds.MS.gene044567.t1;Parent=MS.gene044567.t1 |
chr8.1 | exon | 14217915 | 14218025 | 14217915 | ID=MS.gene044567.t1.exon6;Parent=MS.gene044567.t1 |
chr8.1 | CDS | 14217915 | 14218025 | 14217915 | ID=cds.MS.gene044567.t1;Parent=MS.gene044567.t1 |
chr8.1 | exon | 14217683 | 14217772 | 14217683 | ID=MS.gene044567.t1.exon7;Parent=MS.gene044567.t1 |
chr8.1 | CDS | 14217683 | 14217772 | 14217683 | ID=cds.MS.gene044567.t1;Parent=MS.gene044567.t1 |
chr8.1 | exon | 14217524 | 14217595 | 14217524 | ID=MS.gene044567.t1.exon8;Parent=MS.gene044567.t1 |
chr8.1 | CDS | 14217524 | 14217595 | 14217524 | ID=cds.MS.gene044567.t1;Parent=MS.gene044567.t1 |
chr8.1 | exon | 14217180 | 14217290 | 14217180 | ID=MS.gene044567.t1.exon9;Parent=MS.gene044567.t1 |
chr8.1 | CDS | 14217180 | 14217290 | 14217180 | ID=cds.MS.gene044567.t1;Parent=MS.gene044567.t1 |
chr8.1 | exon | 14214816 | 14214942 | 14214816 | ID=MS.gene044567.t1.exon10;Parent=MS.gene044567.t1 |
chr8.1 | CDS | 14214816 | 14214942 | 14214816 | ID=cds.MS.gene044567.t1;Parent=MS.gene044567.t1 |
chr8.1 | exon | 14213773 | 14213972 | 14213773 | ID=MS.gene044567.t1.exon11;Parent=MS.gene044567.t1 |
chr8.1 | CDS | 14213773 | 14213972 | 14213773 | ID=cds.MS.gene044567.t1;Parent=MS.gene044567.t1 |
chr8.1 | exon | 14213443 | 14213499 | 14213443 | ID=MS.gene044567.t1.exon12;Parent=MS.gene044567.t1 |
chr8.1 | CDS | 14213443 | 14213499 | 14213443 | ID=cds.MS.gene044567.t1;Parent=MS.gene044567.t1 |
Gene Sequence |
Protein sequence |