Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038750.t1 | XP_013458054.1 | 98 | 941 | 19 | 0 | 1 | 941 | 1 | 941 | 0.00E+00 | 1818.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038750.t1 | O24617 | 74.4 | 941 | 236 | 3 | 1 | 941 | 1 | 936 | 0.0e+00 | 1418.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038750.t1 | A0A072V1T7 | 98.0 | 941 | 19 | 0 | 1 | 941 | 1 | 941 | 0.0e+00 | 1818.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038750.t1 | MTR_4g111945 | 97.981 | 941 | 19 | 0 | 1 | 941 | 1 | 941 | 0.0 | 1909 |
MS.gene038750.t1 | MTR_1g100683 | 27.094 | 764 | 475 | 23 | 159 | 861 | 254 | 996 | 4.15e-59 | 220 |
MS.gene038750.t1 | MTR_1g100683 | 27.094 | 764 | 475 | 23 | 159 | 861 | 254 | 996 | 4.15e-59 | 220 |
MS.gene038750.t1 | MTR_7g109470 | 28.871 | 620 | 347 | 20 | 294 | 861 | 643 | 1220 | 1.65e-51 | 197 |
MS.gene038750.t1 | MTR_6g086270 | 37.540 | 309 | 161 | 8 | 581 | 861 | 789 | 1093 | 6.87e-49 | 189 |
MS.gene038750.t1 | MTR_6g086270 | 26.087 | 391 | 232 | 15 | 124 | 479 | 435 | 803 | 3.11e-15 | 81.3 |
MS.gene038750.t1 | MTR_5g093110 | 27.258 | 609 | 374 | 19 | 285 | 853 | 175 | 754 | 1.60e-46 | 180 |
MS.gene038750.t1 | MTR_1g045670 | 31.250 | 192 | 120 | 4 | 664 | 855 | 766 | 945 | 7.11e-18 | 89.7 |
MS.gene038750.t1 | MTR_5g068600 | 29.327 | 208 | 132 | 4 | 649 | 855 | 418 | 611 | 3.86e-15 | 80.5 |
MS.gene038750.t1 | MTR_5g068600 | 29.327 | 208 | 132 | 4 | 649 | 855 | 318 | 511 | 3.87e-15 | 80.5 |
MS.gene038750.t1 | MTR_4g088920 | 24.766 | 214 | 145 | 5 | 649 | 861 | 414 | 612 | 2.41e-12 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038750.t1 | AT3G18524 | 74.389 | 941 | 236 | 3 | 1 | 941 | 1 | 936 | 0.0 | 1468 |
MS.gene038750.t1 | AT4G25540 | 27.404 | 624 | 390 | 12 | 281 | 861 | 406 | 1009 | 5.49e-57 | 214 |
MS.gene038750.t1 | AT4G17380 | 29.568 | 602 | 347 | 23 | 294 | 854 | 164 | 729 | 8.89e-51 | 192 |
MS.gene038750.t1 | AT4G17380 | 30.224 | 536 | 309 | 19 | 294 | 789 | 164 | 674 | 9.09e-49 | 186 |
MS.gene038750.t1 | AT3G24495 | 37.460 | 315 | 162 | 9 | 580 | 868 | 753 | 1058 | 3.68e-47 | 183 |
MS.gene038750.t1 | AT3G24495 | 25.135 | 370 | 227 | 11 | 120 | 457 | 377 | 728 | 1.13e-13 | 76.3 |
MS.gene038750.t1 | AT4G02070 | 33.133 | 332 | 203 | 6 | 540 | 861 | 949 | 1271 | 1.64e-44 | 175 |
MS.gene038750.t1 | AT4G02070 | 33.133 | 332 | 203 | 6 | 540 | 861 | 946 | 1268 | 1.72e-44 | 175 |
MS.gene038750.t1 | AT3G20475 | 26.974 | 608 | 365 | 22 | 291 | 853 | 179 | 752 | 2.26e-44 | 173 |
MS.gene038750.t1 | AT3G20475 | 26.589 | 598 | 360 | 22 | 291 | 843 | 179 | 742 | 5.04e-42 | 166 |
MS.gene038750.t1 | AT3G20475 | 27.041 | 588 | 360 | 21 | 291 | 838 | 179 | 737 | 1.04e-40 | 162 |
MS.gene038750.t1 | AT5G54090 | 30.660 | 212 | 124 | 4 | 649 | 855 | 424 | 617 | 2.09e-18 | 91.3 |
MS.gene038750.t1 | AT3G24320 | 32.105 | 190 | 117 | 5 | 664 | 853 | 765 | 942 | 3.89e-18 | 90.5 |
MS.gene038750.t1 | AT3G24320 | 32.105 | 190 | 117 | 5 | 664 | 853 | 520 | 697 | 4.09e-18 | 90.5 |
MS.gene038750.t1 | AT3G24495 | 25.135 | 370 | 227 | 11 | 120 | 457 | 377 | 728 | 1.58e-13 | 75.5 |
Find 192 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTTCTGCCCTATCCTTAA+TGG | 0.147984 | 8.3:-14103942 | MS.gene038750:CDS |
CAACAAATGCTTCAAGAATT+TGG | 0.163300 | 8.3:+14103309 | None:intergenic |
GCTAAGGCGACAACACTTTC+AGG | 0.194610 | 8.3:+14103998 | None:intergenic |
TCACTTAACTTCCGTGAAAA+TGG | 0.217898 | 8.3:-14112104 | MS.gene038750:CDS |
GAGCAAATATTTGAAAGATT+TGG | 0.230431 | 8.3:-14110449 | MS.gene038750:CDS |
AAGAATTTGGCGAGCCTTTA+CGG | 0.238865 | 8.3:+14103322 | None:intergenic |
CTCTTCTGTGGATTCCATTA+AGG | 0.246181 | 8.3:+14103928 | None:intergenic |
GAAACTTCATCAATATTAAA+AGG | 0.253143 | 8.3:-14106724 | MS.gene038750:CDS |
GTTACTAAGCTTTGCTGATT+TGG | 0.264775 | 8.3:-14109792 | MS.gene038750:CDS |
GAATTTGCACCTGGTGCTTT+GGG | 0.265294 | 8.3:-14111774 | MS.gene038750:CDS |
CAAGCTCAATAAATTTGTTT+AGG | 0.289581 | 8.3:+14110404 | None:intergenic |
AAACTCCCCGAGCTCAAATT+AGG | 0.289779 | 8.3:-14114135 | MS.gene038750:intron |
ACATGTTGTTAAACTTTATC+AGG | 0.302362 | 8.3:-14111361 | MS.gene038750:intron |
AGTTGGTTTCAAATAATAAC+AGG | 0.302730 | 8.3:-14109391 | MS.gene038750:CDS |
TAAACTTCACTCCATCTTTA+CGG | 0.311723 | 8.3:+14110104 | None:intergenic |
GGGTTTCCAATACGATAAAC+TGG | 0.314642 | 8.3:+14110125 | None:intergenic |
ATTACCAGGTGTACCGCTTT+TGG | 0.318900 | 8.3:+14112196 | None:intergenic |
TTAGACAAGGGAACGCAATT+TGG | 0.319799 | 8.3:-14110205 | MS.gene038750:CDS |
AGCTGAATTGATTTCCGAAT+TGG | 0.322151 | 8.3:-14109819 | MS.gene038750:CDS |
TGAATTTGCACCTGGTGCTT+TGG | 0.325654 | 8.3:-14111775 | MS.gene038750:CDS |
AGAAGGAAGAGCCGAAAATA+AGG | 0.327757 | 8.3:-14110162 | MS.gene038750:CDS |
ACATCAACTTACGACGGATT+TGG | 0.329652 | 8.3:-14106655 | MS.gene038750:intron |
ACTGCATTAGCCGATGAAAT+TGG | 0.346302 | 8.3:-14105161 | MS.gene038750:CDS |
AATGGGTGCACCATTGGATT+AGG | 0.347556 | 8.3:-14112086 | MS.gene038750:CDS |
ACCTTGATCATCTAGAGAAC+GGG | 0.350403 | 8.3:-14110366 | MS.gene038750:CDS |
TTCAAGCATTTCTTGCATAA+AGG | 0.352158 | 8.3:+14106744 | None:intergenic |
GTTTATTTGGTCTCATGAAT+AGG | 0.354518 | 8.3:-14111593 | MS.gene038750:CDS |
CTTACAAGCTTGCAATCATT+TGG | 0.355956 | 8.3:+14109508 | None:intergenic |
TAGAGAAAAGGCAGCAGAAT+TGG | 0.360202 | 8.3:-14103975 | MS.gene038750:CDS |
AAACTTCACTCCATCTTTAC+GGG | 0.362278 | 8.3:+14110105 | None:intergenic |
GTTGATTTGCCACCCATGTT+AGG | 0.365141 | 8.3:+14109367 | None:intergenic |
AGTTATGACACTACACTATC+TGG | 0.365622 | 8.3:-14110325 | MS.gene038750:CDS |
TCAGATGCTGCCTCAGATCT+TGG | 0.368959 | 8.3:+14111445 | None:intergenic |
ATATCGTTTACATCTAATAA+TGG | 0.369553 | 8.3:+14111519 | None:intergenic |
CAGAAACCCTTGTGCTTGCT+TGG | 0.383089 | 8.3:+14113972 | None:intergenic |
CTTGTGTGGAGGCTCAAGAC+TGG | 0.384137 | 8.3:-14109543 | MS.gene038750:CDS |
CGTGAAAATGGGTGCACCAT+TGG | 0.390296 | 8.3:-14112092 | MS.gene038750:CDS |
CAACACCCAGTTTATCGTAT+TGG | 0.394945 | 8.3:-14110131 | MS.gene038750:CDS |
GCAGTTCAAGATTTAGTGTC+TGG | 0.395743 | 8.3:-14111801 | MS.gene038750:CDS |
AGTAGTGTGATAGTAGGTTT+TGG | 0.401446 | 8.3:+14112373 | None:intergenic |
AGCGGTACACCTGGTAATAT+TGG | 0.403040 | 8.3:-14112191 | MS.gene038750:CDS |
AGTGACAGCGCAACAACAAC+TGG | 0.407997 | 8.3:+14112122 | None:intergenic |
AGAGATCTGGTACAGGATCT+TGG | 0.409711 | 8.3:-14111849 | MS.gene038750:CDS |
ATGAGGGCAGCAGCTCTAAC+TGG | 0.418559 | 8.3:-14112226 | MS.gene038750:CDS |
GGAGCTTGTGATCAGAGTTT+CGG | 0.422275 | 8.3:-14104049 | MS.gene038750:CDS |
CAGCAGCTCTAACTGGCAAC+TGG | 0.425469 | 8.3:-14112219 | MS.gene038750:CDS |
GAGTCAGCATTGGTTGGTCT+TGG | 0.426449 | 8.3:-14111993 | MS.gene038750:CDS |
CGCAAGCTTGGCAAGAAGTA+AGG | 0.428510 | 8.3:-14103259 | MS.gene038750:CDS |
AACTTTAATGCCTTATCTAC+AGG | 0.429470 | 8.3:+14110226 | None:intergenic |
GGTGATGTCAGGTCTTGTAT+AGG | 0.429489 | 8.3:+14109751 | None:intergenic |
GTGATGTCAGGTCTTGTATA+GGG | 0.433096 | 8.3:+14109752 | None:intergenic |
TTGATAATCATTGATGAGTT+GGG | 0.441039 | 8.3:-14106685 | MS.gene038750:CDS |
TACAGGATCCGAGGGCCATT+AGG | 0.444580 | 8.3:-14113344 | MS.gene038750:intron |
GCTTAGTAACACGTCCAATT+CGG | 0.446279 | 8.3:+14109805 | None:intergenic |
GATACTCATAAGCAAATTGT+TGG | 0.447044 | 8.3:-14105131 | MS.gene038750:CDS |
CTTGATAATCATTGATGAGT+TGG | 0.451893 | 8.3:-14106686 | MS.gene038750:CDS |
CACTTAACTTCCGTGAAAAT+GGG | 0.453131 | 8.3:-14112103 | MS.gene038750:CDS |
AAACTGATGAGATGTCTAAA+GGG | 0.458547 | 8.3:-14103346 | MS.gene038750:CDS |
GCGAAACCTAATTTGAGCTC+GGG | 0.459559 | 8.3:+14114129 | None:intergenic |
TAGGACCTGTACAGCTGGAA+TGG | 0.468873 | 8.3:-14111574 | MS.gene038750:CDS |
GAAACTGATGAGATGTCTAA+AGG | 0.470476 | 8.3:-14103347 | MS.gene038750:CDS |
ATTTGAAAGATTTGGAGCTA+TGG | 0.471971 | 8.3:-14110441 | MS.gene038750:CDS |
TCTTGATCTTCCTGTAGATA+AGG | 0.474885 | 8.3:-14110236 | MS.gene038750:CDS |
GCCTTACATTAAAAGTGCTC+TGG | 0.478506 | 8.3:-14110506 | MS.gene038750:CDS |
AGGATGCACAACACTGTCAT+TGG | 0.479566 | 8.3:-14103214 | MS.gene038750:CDS |
CCATTAGGTTCTTTGACCGT+CGG | 0.481973 | 8.3:-14113329 | MS.gene038750:CDS |
CCTCATAGACCTCAAGTGTA+TGG | 0.485875 | 8.3:+14112243 | None:intergenic |
CTGTGGATTCCATTAAGGAT+AGG | 0.486649 | 8.3:+14103933 | None:intergenic |
GTCAACAATGTGCTCACAAA+TGG | 0.491756 | 8.3:+14105229 | None:intergenic |
CATTAGGTTCTTTGACCGTC+GGG | 0.491868 | 8.3:-14113328 | MS.gene038750:intron |
GTACAGCTGGAATGGGAAAA+CGG | 0.492057 | 8.3:-14111566 | MS.gene038750:CDS |
AATAGCCCGTGATCTACTCT+TGG | 0.492191 | 8.3:-14112276 | MS.gene038750:CDS |
AATCTTCAGAAGCGAAAAGC+TGG | 0.492681 | 8.3:-14111390 | MS.gene038750:CDS |
GATCTAACTAAGAGACTACT+TGG | 0.493244 | 8.3:-14112056 | MS.gene038750:CDS |
ATCAATATTAAAAGGAGCTA+CGG | 0.496095 | 8.3:-14106716 | MS.gene038750:CDS |
AATAATAACAGGGCCTAACA+TGG | 0.496952 | 8.3:-14109380 | MS.gene038750:CDS |
CCATGGACAAAACGCAAGCT+TGG | 0.498752 | 8.3:-14103271 | MS.gene038750:CDS |
CACGAATGTGGAGTCAGCAT+TGG | 0.501115 | 8.3:-14112003 | MS.gene038750:CDS |
CCTCAGATCTTGGCGAAGCA+CGG | 0.502927 | 8.3:+14111455 | None:intergenic |
CGAGTTTAAGACTAGAGATC+TGG | 0.503656 | 8.3:-14111862 | MS.gene038750:CDS |
AGGACCTGTACAGCTGGAAT+GGG | 0.503753 | 8.3:-14111573 | MS.gene038750:CDS |
GTTGAAAGATAATTTAGAGA+AGG | 0.504906 | 8.3:-14103234 | MS.gene038750:CDS |
CCGACGGTCAAAGAACCTAA+TGG | 0.506805 | 8.3:+14113329 | None:intergenic |
TGTGGATTCCATTAAGGATA+GGG | 0.508432 | 8.3:+14103934 | None:intergenic |
ACATTAAAAGTGCTCTGGAC+AGG | 0.509244 | 8.3:-14110501 | MS.gene038750:CDS |
GCTCTGAGACAGTTGGGTAG+TGG | 0.510429 | 8.3:-14112347 | MS.gene038750:CDS |
TGCGAAACCTAATTTGAGCT+CGG | 0.513446 | 8.3:+14114128 | None:intergenic |
GCAATCACGAATAGATATGC+TGG | 0.513847 | 8.3:+14109043 | None:intergenic |
AGTGCTCTGGACAGGTATGA+TGG | 0.516158 | 8.3:-14110493 | MS.gene038750:CDS |
TCTTGGCTTTAATAGGATGA+AGG | 0.516348 | 8.3:-14109595 | MS.gene038750:intron |
ATGAATAGGACCTGTACAGC+TGG | 0.516778 | 8.3:-14111579 | MS.gene038750:CDS |
CTAAGGCGACAACACTTTCA+GGG | 0.519339 | 8.3:+14103999 | None:intergenic |
CTGGCCAAAAGCGGTACACC+TGG | 0.519878 | 8.3:-14112200 | MS.gene038750:CDS |
ATCATTGCTGCCAATTTCAT+CGG | 0.519890 | 8.3:+14105151 | None:intergenic |
TACTACTGCTCTGAGACAGT+TGG | 0.522433 | 8.3:-14112354 | MS.gene038750:CDS |
GTGATATGAAGGTCTTGCTT+GGG | 0.523423 | 8.3:-14105252 | MS.gene038750:intron |
CCATACACTTGAGGTCTATG+AGG | 0.527362 | 8.3:-14112243 | MS.gene038750:CDS |
ATCATTGATGAGTTGGGACG+TGG | 0.529738 | 8.3:-14106679 | MS.gene038750:CDS |
CAACTCATCAATGATTATCA+AGG | 0.531873 | 8.3:+14106687 | None:intergenic |
GGTACCGATGAGGTGATGTC+AGG | 0.533662 | 8.3:+14109740 | None:intergenic |
ACTACTGCTCTGAGACAGTT+GGG | 0.534003 | 8.3:-14112353 | MS.gene038750:CDS |
AAACTCTGATCACAAGCTCC+TGG | 0.536283 | 8.3:+14104052 | None:intergenic |
ATGCAGTCAGCTCATGAAAG+TGG | 0.540810 | 8.3:+14105177 | None:intergenic |
AATTTGCACCTGGTGCTTTG+GGG | 0.541201 | 8.3:-14111773 | MS.gene038750:CDS |
AAGTGGGTTGCAAATAAAGT+AGG | 0.541878 | 8.3:+14105194 | None:intergenic |
GATGTCTAAAGGGGCCGTAA+AGG | 0.542377 | 8.3:-14103336 | MS.gene038750:CDS |
CAAGCTAACTATGCTATACA+AGG | 0.546684 | 8.3:-14105063 | MS.gene038750:intron |
GTGGCAAATCAACATTCATC+CGG | 0.548699 | 8.3:-14109357 | MS.gene038750:CDS |
CAGTCTTGAGCCTCCACACA+AGG | 0.548981 | 8.3:+14109544 | None:intergenic |
AGCAGTAGTAGTGTGATAGT+AGG | 0.549498 | 8.3:+14112367 | None:intergenic |
AATATCAGACATTGAGCGAC+TGG | 0.550956 | 8.3:-14111418 | MS.gene038750:CDS |
TACAGGAAGATCAAGATCAA+TGG | 0.551026 | 8.3:+14110243 | None:intergenic |
TCTACTTTCTAGGTTGAACC+AGG | 0.551501 | 8.3:-14104070 | MS.gene038750:intron |
GTATTGGAAACCCGTAAAGA+TGG | 0.551808 | 8.3:-14110115 | MS.gene038750:CDS |
TCAGGTCTTGTATAGGGAGT+AGG | 0.552308 | 8.3:+14109758 | None:intergenic |
TAAGATATTAAGTGCCCTCA+TGG | 0.552816 | 8.3:+14111647 | None:intergenic |
TTTGTAACTTATCAGATCAG+AGG | 0.555246 | 8.3:-14109418 | MS.gene038750:intron |
CAAATCAACATTCATCCGGC+AGG | 0.557847 | 8.3:-14109353 | MS.gene038750:intron |
CCCCGTTCTCTAGATGATCA+AGG | 0.558606 | 8.3:+14110365 | None:intergenic |
ATTTGCACCTGGTGCTTTGG+GGG | 0.559263 | 8.3:-14111772 | MS.gene038750:CDS |
TGCTTTGCCACTAGAAACCA+TGG | 0.560545 | 8.3:-14103288 | MS.gene038750:CDS |
TCCATTAAGGATAGGGCAGA+AGG | 0.562149 | 8.3:+14103941 | None:intergenic |
ATGAAAATTATACTCTGCGT+AGG | 0.563016 | 8.3:-14111707 | MS.gene038750:CDS |
TGTGATATGAAGGTCTTGCT+TGG | 0.563992 | 8.3:-14105253 | MS.gene038750:intron |
CACTACACTATCTGGACTGA+AGG | 0.564158 | 8.3:-14110317 | MS.gene038750:CDS |
GACCTTGATCATCTAGAGAA+CGG | 0.564291 | 8.3:-14110367 | MS.gene038750:CDS |
TCATAAGCAAATTGTTGGTG+TGG | 0.571629 | 8.3:-14105126 | MS.gene038750:CDS |
TGTCGCCTTAGCTAGAGAAA+AGG | 0.572310 | 8.3:-14103987 | MS.gene038750:CDS |
TTGTGTGGAGGCTCAAGACT+GGG | 0.578627 | 8.3:-14109542 | MS.gene038750:CDS |
GATATGCTGGCTTTGTCACA+TGG | 0.579550 | 8.3:+14109056 | None:intergenic |
GTAGATTCCAAGCAAGCACA+AGG | 0.580887 | 8.3:-14113979 | MS.gene038750:intron |
TCTGGATTTGAATTTGCACC+TGG | 0.584665 | 8.3:-14111783 | MS.gene038750:CDS |
TTCTCTCCAAGAGTAGATCA+CGG | 0.584948 | 8.3:+14112270 | None:intergenic |
GATCTTGGAAGGCTTGTCAA+AGG | 0.585706 | 8.3:-14111834 | MS.gene038750:CDS |
ATCAACAAAGCCTAATCCAA+TGG | 0.588140 | 8.3:+14112076 | None:intergenic |
TGACAGTCACTTCACGAATG+TGG | 0.589108 | 8.3:-14112015 | MS.gene038750:CDS |
CCGTGCTTCGCCAAGATCTG+AGG | 0.590083 | 8.3:-14111455 | MS.gene038750:CDS |
TGCAGTCAGCTCATGAAAGT+GGG | 0.590382 | 8.3:+14105178 | None:intergenic |
TAAGACTAGAGATCTGGTAC+AGG | 0.591031 | 8.3:-14111856 | MS.gene038750:CDS |
AAAATGATGTACCTCTTCTG+TGG | 0.591271 | 8.3:+14103916 | None:intergenic |
GAAGACACTTACATCAGGTA+GGG | 0.591483 | 8.3:+14113936 | None:intergenic |
TGTTTGTGTTACAGGATCCG+AGG | 0.593285 | 8.3:-14113353 | MS.gene038750:intron |
GTTAGATTCTGCAGCCATGA+GGG | 0.594118 | 8.3:-14111661 | MS.gene038750:CDS |
AACTGGCAACTGGCCAAAAG+CGG | 0.596553 | 8.3:-14112209 | MS.gene038750:CDS |
TCAAAACTGCCAATATTACC+AGG | 0.600342 | 8.3:+14112182 | None:intergenic |
AATGTGGAGTCAGCATTGGT+TGG | 0.600843 | 8.3:-14111999 | MS.gene038750:CDS |
AAAGATTTGGAGCTATGGAC+TGG | 0.601557 | 8.3:-14110436 | MS.gene038750:CDS |
ATGTAAACGATATTAACTCC+AGG | 0.602595 | 8.3:-14111509 | MS.gene038750:CDS |
AAACGATATTAACTCCAGGT+TGG | 0.605439 | 8.3:-14111505 | MS.gene038750:CDS |
TGTGATGTGCTGACTAAATG+TGG | 0.607909 | 8.3:-14111912 | MS.gene038750:CDS |
CATTTCAGCATCTTTCTCTG+AGG | 0.609483 | 8.3:-14109987 | MS.gene038750:intron |
TGCTTGTACTACATCCAACC+TGG | 0.613234 | 8.3:+14111491 | None:intergenic |
TCAATGGATGAAAACTTCGA+CGG | 0.613455 | 8.3:-14114168 | MS.gene038750:CDS |
TTCCACGCTCAATTGGCACA+AGG | 0.613586 | 8.3:+14111958 | None:intergenic |
TCAAAGAACCTAATGGCCCT+CGG | 0.618346 | 8.3:+14113336 | None:intergenic |
AAGACCTGACATCACCTCAT+CGG | 0.618662 | 8.3:-14109744 | MS.gene038750:intron |
TTTCCAGTGTGAGTGTCAGT+AGG | 0.619294 | 8.3:-14112313 | MS.gene038750:CDS |
ATCTGGTACAGGATCTTGGA+AGG | 0.620729 | 8.3:-14111845 | MS.gene038750:CDS |
CAGATCTCTAGTCTTAAACT+CGG | 0.621660 | 8.3:+14111863 | None:intergenic |
CGAAACCTAATTTGAGCTCG+GGG | 0.626639 | 8.3:+14114130 | None:intergenic |
GTTTGTGTTACAGGATCCGA+GGG | 0.629304 | 8.3:-14113352 | MS.gene038750:intron |
AGAAGACACTTACATCAGGT+AGG | 0.630411 | 8.3:+14113935 | None:intergenic |
AGGTAGCAGACACCCTTGTG+TGG | 0.631996 | 8.3:-14109557 | MS.gene038750:CDS |
TCTCTCCAAGAGTAGATCAC+GGG | 0.633717 | 8.3:+14112271 | None:intergenic |
GTTCCTACTGACACTCACAC+TGG | 0.635407 | 8.3:+14112310 | None:intergenic |
CATACACTTGAGGTCTATGA+GGG | 0.635742 | 8.3:-14112242 | MS.gene038750:CDS |
GAATGATGCATTCTCACCGT+GGG | 0.638615 | 8.3:+14112400 | None:intergenic |
CAGGATTACTATACCGCCCA+CGG | 0.638679 | 8.3:-14112416 | MS.gene038750:CDS |
CTTAATGGAATCCACAGAAG+AGG | 0.640878 | 8.3:-14103927 | MS.gene038750:intron |
TGCCTTGTGCCAATTGAGCG+TGG | 0.641065 | 8.3:-14111960 | MS.gene038750:CDS |
TGATGCATTCTCACCGTGGG+CGG | 0.644284 | 8.3:+14112403 | None:intergenic |
TAGCAGACACCCTTGTGTGG+AGG | 0.644987 | 8.3:-14109554 | MS.gene038750:CDS |
GGTTAGATTCTGCAGCCATG+AGG | 0.646770 | 8.3:-14111662 | MS.gene038750:CDS |
GAGAACAGACCATACACTTG+AGG | 0.649486 | 8.3:-14112252 | MS.gene038750:CDS |
GAAAACGGCTATTGCACATG+TGG | 0.651889 | 8.3:-14111551 | MS.gene038750:CDS |
ATAATAACAGGGCCTAACAT+GGG | 0.653591 | 8.3:-14109379 | MS.gene038750:CDS |
TAAGGCATTAAAGTTAGACA+AGG | 0.655889 | 8.3:-14110218 | MS.gene038750:CDS |
CCTTGATCATCTAGAGAACG+GGG | 0.660816 | 8.3:-14110365 | MS.gene038750:CDS |
TGTAGTACAAGCATTTGTAG+AGG | 0.662304 | 8.3:-14111481 | MS.gene038750:CDS |
AACTGATGAGATGTCTAAAG+GGG | 0.665562 | 8.3:-14103345 | MS.gene038750:CDS |
ATCTAACTAAGAGACTACTT+GGG | 0.666797 | 8.3:-14112055 | MS.gene038750:CDS |
ATAACAGGGCCTAACATGGG+TGG | 0.666933 | 8.3:-14109376 | MS.gene038750:CDS |
GTTGGTTTCAAATAATAACA+GGG | 0.674949 | 8.3:-14109390 | MS.gene038750:CDS |
GGTTTCCAATACGATAAACT+GGG | 0.676046 | 8.3:+14110126 | None:intergenic |
TGAATGATGCATTCTCACCG+TGG | 0.683993 | 8.3:+14112399 | None:intergenic |
TCGTGAAGTGACTGTCATCG+AGG | 0.692754 | 8.3:+14112021 | None:intergenic |
AAGGCATTAAAGTTAGACAA+GGG | 0.698808 | 8.3:-14110217 | MS.gene038750:CDS |
ACAATCTTGACAGTTACATG+AGG | 0.699774 | 8.3:-14111683 | MS.gene038750:CDS |
TAGATTCCAAGCAAGCACAA+GGG | 0.700123 | 8.3:-14113978 | MS.gene038750:CDS |
AGTCTTGAGCCTCCACACAA+GGG | 0.709256 | 8.3:+14109545 | None:intergenic |
CTATTAACGAGGTACCGATG+AGG | 0.733890 | 8.3:+14109730 | None:intergenic |
CGTGGCACATCAACTTACGA+CGG | 0.739282 | 8.3:-14106661 | MS.gene038750:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 14103199 | 14114187 | 14103199 | ID=MS.gene038750 |
chr8.3 | mRNA | 14103199 | 14114187 | 14103199 | ID=MS.gene038750.t1;Parent=MS.gene038750 |
chr8.3 | exon | 14114136 | 14114187 | 14114136 | ID=MS.gene038750.t1.exon1;Parent=MS.gene038750.t1 |
chr8.3 | CDS | 14114136 | 14114187 | 14114136 | ID=cds.MS.gene038750.t1;Parent=MS.gene038750.t1 |
chr8.3 | exon | 14113948 | 14113997 | 14113948 | ID=MS.gene038750.t1.exon2;Parent=MS.gene038750.t1 |
chr8.3 | CDS | 14113948 | 14113997 | 14113948 | ID=cds.MS.gene038750.t1;Parent=MS.gene038750.t1 |
chr8.3 | exon | 14113329 | 14113361 | 14113329 | ID=MS.gene038750.t1.exon3;Parent=MS.gene038750.t1 |
chr8.3 | CDS | 14113329 | 14113361 | 14113329 | ID=cds.MS.gene038750.t1;Parent=MS.gene038750.t1 |
chr8.3 | exon | 14111362 | 14112435 | 14111362 | ID=MS.gene038750.t1.exon4;Parent=MS.gene038750.t1 |
chr8.3 | CDS | 14111362 | 14112435 | 14111362 | ID=cds.MS.gene038750.t1;Parent=MS.gene038750.t1 |
chr8.3 | exon | 14109988 | 14110542 | 14109988 | ID=MS.gene038750.t1.exon5;Parent=MS.gene038750.t1 |
chr8.3 | CDS | 14109988 | 14110542 | 14109988 | ID=cds.MS.gene038750.t1;Parent=MS.gene038750.t1 |
chr8.3 | exon | 14109745 | 14109855 | 14109745 | ID=MS.gene038750.t1.exon6;Parent=MS.gene038750.t1 |
chr8.3 | CDS | 14109745 | 14109855 | 14109745 | ID=cds.MS.gene038750.t1;Parent=MS.gene038750.t1 |
chr8.3 | exon | 14109513 | 14109602 | 14109513 | ID=MS.gene038750.t1.exon7;Parent=MS.gene038750.t1 |
chr8.3 | CDS | 14109513 | 14109602 | 14109513 | ID=cds.MS.gene038750.t1;Parent=MS.gene038750.t1 |
chr8.3 | exon | 14109354 | 14109425 | 14109354 | ID=MS.gene038750.t1.exon8;Parent=MS.gene038750.t1 |
chr8.3 | CDS | 14109354 | 14109425 | 14109354 | ID=cds.MS.gene038750.t1;Parent=MS.gene038750.t1 |
chr8.3 | exon | 14109010 | 14109120 | 14109010 | ID=MS.gene038750.t1.exon9;Parent=MS.gene038750.t1 |
chr8.3 | CDS | 14109010 | 14109120 | 14109010 | ID=cds.MS.gene038750.t1;Parent=MS.gene038750.t1 |
chr8.3 | exon | 14106656 | 14106782 | 14106656 | ID=MS.gene038750.t1.exon10;Parent=MS.gene038750.t1 |
chr8.3 | CDS | 14106656 | 14106782 | 14106656 | ID=cds.MS.gene038750.t1;Parent=MS.gene038750.t1 |
chr8.3 | exon | 14105064 | 14105263 | 14105064 | ID=MS.gene038750.t1.exon11;Parent=MS.gene038750.t1 |
chr8.3 | CDS | 14105064 | 14105263 | 14105064 | ID=cds.MS.gene038750.t1;Parent=MS.gene038750.t1 |
chr8.3 | exon | 14103928 | 14104080 | 14103928 | ID=MS.gene038750.t1.exon12;Parent=MS.gene038750.t1 |
chr8.3 | CDS | 14103928 | 14104080 | 14103928 | ID=cds.MS.gene038750.t1;Parent=MS.gene038750.t1 |
chr8.3 | exon | 14103199 | 14103396 | 14103199 | ID=MS.gene038750.t1.exon13;Parent=MS.gene038750.t1 |
chr8.3 | CDS | 14103199 | 14103396 | 14103199 | ID=cds.MS.gene038750.t1;Parent=MS.gene038750.t1 |
Gene Sequence |
Protein sequence |