Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36627.t1 | XP_003627048.1 | 98.6 | 494 | 7 | 0 | 1 | 494 | 1 | 494 | 1.60E-276 | 961.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36627.t1 | Q9SEK2 | 72.9 | 494 | 133 | 1 | 1 | 493 | 1 | 494 | 7.5e-211 | 734.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36627.t1 | G7LGP4 | 98.6 | 494 | 7 | 0 | 1 | 494 | 1 | 494 | 1.1e-276 | 961.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene36627 | 0.800515 | 1.39E-48 | -1.69E-46 |
| MS.gene049703 | MS.gene36627 | -0.807017 | 6.21E-50 | -1.69E-46 |
| MS.gene050114 | MS.gene36627 | 0.843989 | 9.98E-59 | -1.69E-46 |
| MS.gene050277 | MS.gene36627 | 0.811026 | 8.60E-51 | -1.69E-46 |
| MS.gene050317 | MS.gene36627 | 0.800182 | 1.62E-48 | -1.69E-46 |
| MS.gene050320 | MS.gene36627 | 0.80664 | 7.46E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene36627 | 0.877665 | 5.24E-69 | -1.69E-46 |
| MS.gene051003 | MS.gene36627 | 0.813469 | 2.52E-51 | -1.69E-46 |
| MS.gene051233 | MS.gene36627 | 0.815408 | 9.39E-52 | -1.69E-46 |
| MS.gene051746 | MS.gene36627 | 0.805218 | 1.48E-49 | -1.69E-46 |
| MS.gene051748 | MS.gene36627 | 0.825014 | 5.90E-54 | -1.69E-46 |
| MS.gene051756 | MS.gene36627 | 0.823739 | 1.18E-53 | -1.69E-46 |
| MS.gene051850 | MS.gene36627 | 0.845324 | 4.36E-59 | -1.69E-46 |
| MS.gene051903 | MS.gene36627 | 0.826498 | 2.63E-54 | -1.69E-46 |
| MS.gene052335 | MS.gene36627 | 0.805113 | 1.56E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene36627 | 0.834086 | 3.67E-56 | -1.69E-46 |
| MS.gene053109 | MS.gene36627 | 0.834818 | 2.41E-56 | -1.69E-46 |
| MS.gene053167 | MS.gene36627 | 0.814114 | 1.82E-51 | -1.69E-46 |
| MS.gene053677 | MS.gene36627 | 0.81063 | 1.05E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene36627 | 0.807187 | 5.71E-50 | -1.69E-46 |
| MS.gene054250 | MS.gene36627 | 0.804755 | 1.85E-49 | -1.69E-46 |
| MS.gene055174 | MS.gene36627 | 0.821327 | 4.28E-53 | -1.69E-46 |
| MS.gene055424 | MS.gene36627 | 0.804897 | 1.73E-49 | -1.69E-46 |
| MS.gene056097 | MS.gene36627 | 0.816243 | 6.11E-52 | -1.69E-46 |
| MS.gene056181 | MS.gene36627 | 0.8209 | 5.37E-53 | -1.69E-46 |
| MS.gene056432 | MS.gene36627 | 0.817565 | 3.09E-52 | -1.69E-46 |
| MS.gene056580 | MS.gene36627 | 0.805236 | 1.47E-49 | -1.69E-46 |
| MS.gene056752 | MS.gene36627 | 0.809876 | 1.52E-50 | -1.69E-46 |
| MS.gene056992 | MS.gene36627 | 0.810071 | 1.38E-50 | -1.69E-46 |
| MS.gene057057 | MS.gene36627 | 0.831264 | 1.84E-55 | -1.69E-46 |
| MS.gene057094 | MS.gene36627 | 0.865578 | 5.33E-65 | -1.69E-46 |
| MS.gene057234 | MS.gene36627 | 0.829266 | 5.67E-55 | -1.69E-46 |
| MS.gene057452 | MS.gene36627 | -0.821613 | 3.68E-53 | -1.69E-46 |
| MS.gene058054 | MS.gene36627 | 0.81296 | 3.26E-51 | -1.69E-46 |
| MS.gene058055 | MS.gene36627 | 0.820746 | 5.83E-53 | -1.69E-46 |
| MS.gene058238 | MS.gene36627 | 0.804368 | 2.23E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene36627 | 0.806182 | 9.31E-50 | -1.69E-46 |
| MS.gene058639 | MS.gene36627 | 0.813205 | 2.88E-51 | -1.69E-46 |
| MS.gene058758 | MS.gene36627 | 0.841588 | 4.34E-58 | -1.69E-46 |
| MS.gene05880 | MS.gene36627 | 0.80056 | 1.36E-48 | -1.69E-46 |
| MS.gene058906 | MS.gene36627 | 0.807566 | 4.75E-50 | -1.69E-46 |
| MS.gene059171 | MS.gene36627 | 0.820442 | 6.85E-53 | -1.69E-46 |
| MS.gene06001 | MS.gene36627 | 0.815632 | 8.37E-52 | -1.69E-46 |
| MS.gene060465 | MS.gene36627 | 0.804296 | 2.31E-49 | -1.69E-46 |
| MS.gene060563 | MS.gene36627 | 0.817081 | 3.97E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36627.t1 | MTR_8g014530 | 98.583 | 494 | 7 | 0 | 1 | 494 | 1 | 494 | 0.0 | 1002 |
| MS.gene36627.t1 | MTR_8g102460 | 74.414 | 469 | 118 | 2 | 25 | 492 | 26 | 493 | 0.0 | 736 |
| MS.gene36627.t1 | MTR_6g088795 | 70.130 | 462 | 137 | 1 | 32 | 492 | 30 | 491 | 0.0 | 681 |
| MS.gene36627.t1 | MTR_8g102460 | 74.860 | 358 | 90 | 0 | 135 | 492 | 1 | 358 | 0.0 | 570 |
| MS.gene36627.t1 | MTR_8g102460 | 76.506 | 332 | 76 | 2 | 25 | 355 | 26 | 356 | 0.0 | 530 |
| MS.gene36627.t1 | MTR_1g025140 | 57.837 | 453 | 188 | 3 | 40 | 491 | 42 | 492 | 0.0 | 520 |
| MS.gene36627.t1 | MTR_5g009000 | 56.263 | 471 | 193 | 5 | 29 | 489 | 29 | 496 | 1.75e-173 | 498 |
| MS.gene36627.t1 | MTR_1g025140 | 61.290 | 341 | 130 | 2 | 40 | 379 | 42 | 381 | 6.73e-144 | 418 |
| MS.gene36627.t1 | MTR_4g097900 | 49.446 | 271 | 96 | 4 | 221 | 488 | 1 | 233 | 1.48e-75 | 238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36627.t1 | AT2G19860 | 71.862 | 494 | 138 | 1 | 1 | 493 | 1 | 494 | 0.0 | 730 |
| MS.gene36627.t1 | AT4G29130 | 73.077 | 494 | 132 | 1 | 1 | 493 | 1 | 494 | 0.0 | 729 |
| MS.gene36627.t1 | AT2G19860 | 73.506 | 385 | 101 | 1 | 110 | 493 | 1 | 385 | 0.0 | 588 |
| MS.gene36627.t1 | AT1G50460 | 52.008 | 473 | 213 | 6 | 26 | 487 | 26 | 495 | 4.29e-163 | 471 |
| MS.gene36627.t1 | AT1G47840 | 53.524 | 454 | 206 | 5 | 40 | 491 | 43 | 493 | 1.46e-162 | 469 |
| MS.gene36627.t1 | AT3G20040 | 49.190 | 494 | 242 | 4 | 1 | 487 | 1 | 492 | 9.12e-154 | 447 |
| MS.gene36627.t1 | AT1G50460 | 50.493 | 406 | 187 | 6 | 93 | 487 | 17 | 419 | 7.03e-129 | 381 |
| MS.gene36627.t1 | AT4G37840 | 44.770 | 478 | 234 | 8 | 22 | 486 | 22 | 482 | 7.66e-124 | 371 |
| MS.gene36627.t1 | AT1G50460 | 54.985 | 331 | 146 | 3 | 26 | 355 | 26 | 354 | 7.89e-122 | 361 |
| MS.gene36627.t1 | AT1G47840 | 58.176 | 318 | 129 | 4 | 40 | 355 | 43 | 358 | 1.77e-119 | 355 |
| MS.gene36627.t1 | AT1G47845 | 46.575 | 146 | 75 | 3 | 278 | 422 | 40 | 183 | 1.02e-33 | 126 |
Find 123 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAAATCACCATGCCATTT+TGG | 0.192144 | 8.4:-76679587 | None:intergenic |
| TGAAAGTTCCATTCATATTA+AGG | 0.249236 | 8.4:+76680005 | MS.gene36627:CDS |
| CAACCACCTTTCTCACTTCT+AGG | 0.268954 | 8.4:-76680949 | None:intergenic |
| TCTCATTCTTATTACCTTGA+TGG | 0.273691 | 8.4:+76681247 | MS.gene36627:CDS |
| GAATAGTCATACTCAGTTAA+TGG | 0.280021 | 8.4:-76679755 | None:intergenic |
| AAGCAAACATCCATTTCTTC+TGG | 0.328497 | 8.4:+76679116 | MS.gene36627:CDS |
| GAAATGGATGTTTGCTTGAC+AGG | 0.331885 | 8.4:-76679110 | None:intergenic |
| CTCTAAAATCTCCTTCAGTT+TGG | 0.351523 | 8.4:-76680762 | None:intergenic |
| TGAAGAAAGTGAAGATTTCA+AGG | 0.377653 | 8.4:+76679043 | MS.gene36627:CDS |
| GATGTCCCGACCATCAAATT+TGG | 0.377775 | 8.4:-76678840 | None:intergenic |
| TTCGTTGATAATCTTCCTAC+AGG | 0.388159 | 8.4:+76677479 | MS.gene36627:CDS |
| TTCCTCCAAATTTGATGGTC+GGG | 0.401839 | 8.4:+76678835 | MS.gene36627:CDS |
| CGCAATTGTACCTGTTCACC+AGG | 0.404155 | 8.4:-76679800 | None:intergenic |
| TCAAATGATGGTTCAGGAAC+TGG | 0.407132 | 8.4:+76681205 | MS.gene36627:CDS |
| GTGCTCAAGCAATACCAAAA+TGG | 0.408539 | 8.4:+76679573 | MS.gene36627:CDS |
| CTTCTGGGAACCTTATCAAC+TGG | 0.409863 | 8.4:+76679132 | MS.gene36627:CDS |
| GTCGTTTACATAGGTTGGTC+AGG | 0.410193 | 8.4:+76679263 | MS.gene36627:intron |
| GATACAGTCGGGACATTAGC+TGG | 0.411737 | 8.4:+76679476 | MS.gene36627:CDS |
| GAGTTTAAACCCTGGTGAAC+AGG | 0.414005 | 8.4:+76679790 | MS.gene36627:CDS |
| TCGTAGAGTACTATACAAAA+TGG | 0.414429 | 8.4:+76679940 | MS.gene36627:CDS |
| CATGGTGATTTGCCCAAGTC+TGG | 0.418240 | 8.4:+76679596 | MS.gene36627:CDS |
| GATAATATCTGGAATGTACT+TGG | 0.418293 | 8.4:+76679907 | MS.gene36627:CDS |
| ACATGGAGTGGGGAAACTTC+CGG | 0.420382 | 8.4:+76679720 | MS.gene36627:CDS |
| CACGTACGCTGCATTTGTTC+CGG | 0.422595 | 8.4:-76679546 | None:intergenic |
| TGATATGAACATAACAGCTT+TGG | 0.423547 | 8.4:+76679329 | MS.gene36627:CDS |
| AATTTGTACCTTAATATGAA+TGG | 0.430233 | 8.4:-76680013 | None:intergenic |
| GTCAATTCCTCCAAATTTGA+TGG | 0.432250 | 8.4:+76678830 | MS.gene36627:CDS |
| GATAAGGTTCCCAGAAGAAA+TGG | 0.432980 | 8.4:-76679126 | None:intergenic |
| AACCTTATCAACTGGACAAA+AGG | 0.439588 | 8.4:+76679140 | MS.gene36627:CDS |
| CACGCTGGTCTTGCTTCTGA+TGG | 0.450067 | 8.4:+76677428 | MS.gene36627:CDS |
| AGCGATATTGAAGGAATTTG+AGG | 0.455513 | 8.4:+76677343 | MS.gene36627:CDS |
| ACTCACCATTTCTCCAGACT+TGG | 0.457826 | 8.4:-76679609 | None:intergenic |
| ACCAACGTTGAAGCTGAAAC+AGG | 0.462199 | 8.4:+76677379 | MS.gene36627:CDS |
| CGTGGGAATTCTGAAGAAGT+TGG | 0.463666 | 8.4:+76681027 | MS.gene36627:CDS |
| GAACACTCAAATGATGGTTC+AGG | 0.466423 | 8.4:+76681199 | MS.gene36627:CDS |
| AGCAAACATCCATTTCTTCT+GGG | 0.478280 | 8.4:+76679117 | MS.gene36627:CDS |
| GTGGCGTGTGCGACGGTGAT+CGG | 0.481181 | 8.4:+76677242 | MS.gene36627:CDS |
| GGTGCTCGTCTTTCTGCAGC+TGG | 0.483516 | 8.4:+76681001 | MS.gene36627:CDS |
| ACAAAATGGCTGAAGAAGCT+TGG | 0.486720 | 8.4:+76679954 | MS.gene36627:CDS |
| GTGGGAATTCTGAAGAAGTT+GGG | 0.490235 | 8.4:+76681028 | MS.gene36627:CDS |
| ATCGTTGAACACTCAAATGA+TGG | 0.490582 | 8.4:+76681193 | MS.gene36627:CDS |
| ATTCTTCTGACCCTCGCCAT+TGG | 0.494342 | 8.4:-76681065 | None:intergenic |
| CCTAGCTCCCTCTTTCTACC+TGG | 0.503608 | 8.4:-76679071 | None:intergenic |
| CTGACCCTCGCCATTGGTGA+TGG | 0.505110 | 8.4:-76681059 | None:intergenic |
| CCAGGTAGAAAGAGGGAGCT+AGG | 0.506646 | 8.4:+76679071 | MS.gene36627:CDS |
| TTGCTTGACAGGAAAGGAAA+AGG | 0.507613 | 8.4:-76679099 | None:intergenic |
| CTCATATAGTCCGCCATCCA+TGG | 0.510941 | 8.4:-76681095 | None:intergenic |
| AACCACCTTTCTCACTTCTA+GGG | 0.512710 | 8.4:-76680948 | None:intergenic |
| CGGAACAAATGCAGCGTACG+TGG | 0.515444 | 8.4:+76679547 | MS.gene36627:CDS |
| ATGATAATTGCTAACCATCA+AGG | 0.517087 | 8.4:-76681261 | None:intergenic |
| TTTGCCCAAGTCTGGAGAAA+TGG | 0.519733 | 8.4:+76679604 | MS.gene36627:CDS |
| AGCAACGGCGGCGTGTGTGG+TGG | 0.521820 | 8.4:+76677265 | MS.gene36627:CDS |
| CGGAGCAACGGCGGCGTGTG+TGG | 0.532373 | 8.4:+76677262 | MS.gene36627:CDS |
| TGACATCCTTGTTTGTATGT+CGG | 0.537032 | 8.4:-76679502 | None:intergenic |
| AAAAGCAATAGCGATATTGA+AGG | 0.541074 | 8.4:+76677334 | MS.gene36627:CDS |
| CTTTCTGCAGCTGGTATCGT+GGG | 0.541549 | 8.4:+76681010 | MS.gene36627:CDS |
| GGCGGCGTGTGTGGTGGCGA+CGG | 0.541737 | 8.4:+76677271 | MS.gene36627:CDS |
| TGCAGAAAGACGAGCACCAC+GGG | 0.544093 | 8.4:-76680996 | None:intergenic |
| AGGTTCCTCCAGGTAGAAAG+AGG | 0.544405 | 8.4:+76679063 | MS.gene36627:CDS |
| GGATGTTTGCTTGACAGGAA+AGG | 0.545412 | 8.4:-76679105 | None:intergenic |
| GAAGATTTCAAGGTTCCTCC+AGG | 0.545754 | 8.4:+76679053 | MS.gene36627:CDS |
| CGTGTATTACGTGTGCAACT+TGG | 0.548240 | 8.4:+76678768 | MS.gene36627:CDS |
| AATACCATAAAAGAGTTGCT+TGG | 0.548770 | 8.4:+76681148 | MS.gene36627:CDS |
| ATTCCTCCAAATTTGATGGT+CGG | 0.548843 | 8.4:+76678834 | MS.gene36627:CDS |
| AAAGGTGGTGGCGTGTGCGA+CGG | 0.549544 | 8.4:+76677235 | MS.gene36627:CDS |
| ACGTGAAGAAATCGAAGCGA+TGG | 0.554895 | 8.4:+76677309 | MS.gene36627:CDS |
| TCTTTCTGCAGCTGGTATCG+TGG | 0.555070 | 8.4:+76681009 | MS.gene36627:CDS |
| TTAATGGAAGGTGTGATGAC+CGG | 0.556688 | 8.4:-76679739 | None:intergenic |
| ATAAAAGAGTTGCTTGGTGA+AGG | 0.558125 | 8.4:+76681154 | MS.gene36627:CDS |
| GTAGGTTATCAACATGGAGT+GGG | 0.559686 | 8.4:+76679709 | MS.gene36627:intron |
| CTCACCATTTCTCCAGACTT+GGG | 0.559699 | 8.4:-76679608 | None:intergenic |
| TGCAATATTGTTGCTACCCG+TGG | 0.560003 | 8.4:+76680980 | MS.gene36627:CDS |
| GTTGCTTGGTGAAGGTGTAT+CGG | 0.561921 | 8.4:+76681162 | MS.gene36627:CDS |
| ATAGGTTGGTCAGGATGTTG+TGG | 0.569173 | 8.4:+76679272 | MS.gene36627:intron |
| GTCCCGACCATCAAATTTGG+AGG | 0.570166 | 8.4:-76678837 | None:intergenic |
| ACCTGTTTCAGCTTCAACGT+TGG | 0.570181 | 8.4:-76677380 | None:intergenic |
| TGATGCATGGCAGACATGTC+AGG | 0.576522 | 8.4:-76680707 | None:intergenic |
| ATAATATCTGGAATGTACTT+GGG | 0.581117 | 8.4:+76679908 | MS.gene36627:CDS |
| TACCTCCCTAGAAGTGAGAA+AGG | 0.582685 | 8.4:+76680943 | MS.gene36627:CDS |
| CGTGAAGAAATCGAAGCGAT+GGG | 0.582816 | 8.4:+76677310 | MS.gene36627:CDS |
| AATAGGTCAATGATACAGTC+GGG | 0.583803 | 8.4:+76679465 | MS.gene36627:intron |
| TGCGACGGTGATCGGAGCAA+CGG | 0.584821 | 8.4:+76677250 | MS.gene36627:CDS |
| GCTGGTCTTGCTTCTGATGG+TGG | 0.587614 | 8.4:+76677431 | MS.gene36627:CDS |
| CAATAGGTCAATGATACAGT+CGG | 0.587691 | 8.4:+76679464 | MS.gene36627:intron |
| AGCGGATGAGTCATGATGCA+TGG | 0.597968 | 8.4:-76680720 | None:intergenic |
| GTGCAACTTGGTGGCAAGGA+TGG | 0.599780 | 8.4:+76678780 | MS.gene36627:CDS |
| CACGAAAGTTAGTTCCTCCA+AGG | 0.603283 | 8.4:-76678749 | None:intergenic |
| GTATTACGTGTGCAACTTGG+TGG | 0.603393 | 8.4:+76678771 | MS.gene36627:CDS |
| GATACCATCACCAATGGCGA+GGG | 0.608591 | 8.4:+76681055 | MS.gene36627:CDS |
| TCAGAAGAATGTGATAGCCA+TGG | 0.609370 | 8.4:+76681078 | MS.gene36627:CDS |
| TGTGGTCAAAACCAAACTGA+AGG | 0.613018 | 8.4:+76680751 | MS.gene36627:CDS |
| CACCTTTCTCACTTCTAGGG+AGG | 0.616334 | 8.4:-76680945 | None:intergenic |
| AGTCATACTCAGTTAATGGA+AGG | 0.616474 | 8.4:-76679751 | None:intergenic |
| TTTGACCACATTGAGATCAG+CGG | 0.628149 | 8.4:-76680738 | None:intergenic |
| GGTTCCTCCAGGTAGAAAGA+GGG | 0.629047 | 8.4:+76679064 | MS.gene36627:CDS |
| GGAAAAGATACCATCACCAA+TGG | 0.629885 | 8.4:+76681049 | MS.gene36627:CDS |
| TGTAGGTTATCAACATGGAG+TGG | 0.631248 | 8.4:+76679708 | MS.gene36627:intron |
| AGATACCATCACCAATGGCG+AGG | 0.631420 | 8.4:+76681054 | MS.gene36627:CDS |
| GACGGTGATCGGAGCAACGG+CGG | 0.635330 | 8.4:+76677253 | MS.gene36627:CDS |
| TCGTTGATAATCTTCCTACA+GGG | 0.639680 | 8.4:+76677480 | MS.gene36627:CDS |
| ACAGGTTGCTGATGCAATGA+CGG | 0.641090 | 8.4:+76677397 | MS.gene36627:CDS |
| AAGAATGTGATAGCCATGGA+TGG | 0.641622 | 8.4:+76681082 | MS.gene36627:CDS |
| TCCCTCTCTGTTTAGGAACG+AGG | 0.652781 | 8.4:+76678704 | MS.gene36627:intron |
| AGCTCCCTCTTTCTACCTGG+AGG | 0.653342 | 8.4:-76679068 | None:intergenic |
| ACGTGTGCAACTTGGTGGCA+AGG | 0.654572 | 8.4:+76678776 | MS.gene36627:CDS |
| ATGACGGTGGAGATGCACGC+TGG | 0.657627 | 8.4:+76677413 | MS.gene36627:CDS |
| GTGAAGAAATCGAAGCGATG+GGG | 0.658037 | 8.4:+76677311 | MS.gene36627:CDS |
| CAAGCAATACCAAAATGGCA+TGG | 0.658759 | 8.4:+76679578 | MS.gene36627:CDS |
| TAGGTTATCAACATGGAGTG+GGG | 0.662335 | 8.4:+76679710 | MS.gene36627:intron |
| AGAAAAGCAATTGAGAGACA+AGG | 0.664902 | 8.4:+76679303 | MS.gene36627:CDS |
| ATTTGGAGGAATTGACACCT+CGG | 0.667035 | 8.4:-76678823 | None:intergenic |
| TCTCTGTTTAGGAACGAGGA+AGG | 0.672788 | 8.4:+76678708 | MS.gene36627:intron |
| CTCATCCGCTGATCTCAATG+TGG | 0.677334 | 8.4:+76680733 | MS.gene36627:CDS |
| ACTGATGTAGGTTATCAACA+TGG | 0.683335 | 8.4:+76679703 | MS.gene36627:intron |
| GCAATTGTACCTGTTCACCA+GGG | 0.688661 | 8.4:-76679799 | None:intergenic |
| CTGCAGAAAGACGAGCACCA+CGG | 0.694987 | 8.4:-76680997 | None:intergenic |
| AATGTGATAGCCATGGATGG+CGG | 0.697169 | 8.4:+76681085 | MS.gene36627:CDS |
| CTCCCTAGAAGTGAGAAAGG+TGG | 0.698711 | 8.4:+76680946 | MS.gene36627:CDS |
| GATGCTGAGAGTTTAAACCC+TGG | 0.699870 | 8.4:+76679782 | MS.gene36627:CDS |
| TGGAGGCCGACATACAAACA+AGG | 0.703627 | 8.4:+76679496 | MS.gene36627:CDS |
| ACAGTCGGGACATTAGCTGG+AGG | 0.724132 | 8.4:+76679479 | MS.gene36627:CDS |
| GGTTGCTGATGCAATGACGG+TGG | 0.729595 | 8.4:+76677400 | MS.gene36627:CDS |
| TGTCAGTCGAGAATTTACCG+AGG | 0.797194 | 8.4:+76678806 | MS.gene36627:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACAATTAAAAAAACAAAA+AGG | - | chr8.4:76680912-76680931 | None:intergenic | 10.0% |
| !!! | AAAATATTTTAATACTTTTC+AGG | - | chr8.4:76678671-76678690 | None:intergenic | 10.0% |
| !! | AAACTAAGTATAAAATGTAA+AGG | - | chr8.4:76679239-76679258 | None:intergenic | 15.0% |
| !! | ATTAAAAAAACAAAAAGGAA+CGG | - | chr8.4:76680907-76680926 | None:intergenic | 15.0% |
| !! | AAGAGTAAATAGTAATTGTT+AGG | - | chr8.4:76678911-76678930 | None:intergenic | 20.0% |
| !! | AATTTGTACCTTAATATGAA+TGG | - | chr8.4:76680016-76680035 | None:intergenic | 20.0% |
| !! | ATATATAGACACATAAAAAG+TGG | - | chr8.4:76678437-76678456 | None:intergenic | 20.0% |
| !! | ATTAATAGCCTCATTTATTA+AGG | - | chr8.4:76679844-76679863 | None:intergenic | 20.0% |
| !! | ATTCTATAAAAATGTGATTC+AGG | + | chr8.4:76678977-76678996 | MS.gene36627:intron | 20.0% |
| !! | CTATAAAAATTCAAAATGCT+CGG | - | chr8.4:76678648-76678667 | None:intergenic | 20.0% |
| !! | GATAAATCAAGTGAATTTAA+GGG | + | chr8.4:76680375-76680394 | MS.gene36627:intron | 20.0% |
| !! | TATAAAATTCTTGAATTCCT+TGG | + | chr8.4:76680598-76680617 | MS.gene36627:intron | 20.0% |
| !! | TGATAAATCAAGTGAATTTA+AGG | + | chr8.4:76680374-76680393 | MS.gene36627:intron | 20.0% |
| !! | TGTTTATTTAAGCTGTTTAT+CGG | + | chr8.4:76678225-76678244 | MS.gene36627:intron | 20.0% |
| !! | TTAAATGTTATGATAAGTGA+CGG | + | chr8.4:76678091-76678110 | MS.gene36627:intron | 20.0% |
| !! | TTTATTGAATTTAGCTGTTA+TGG | + | chr8.4:76678198-76678217 | MS.gene36627:intron | 20.0% |
| !!! | AATGACATCTGAATTTTTAA+AGG | + | chr8.4:76680851-76680870 | MS.gene36627:intron | 20.0% |
| !!! | AGATGTAATTGTTTTTCTAA+TGG | + | chr8.4:76678541-76678560 | MS.gene36627:intron | 20.0% |
| !!! | TCTTTTTGGAAAACATTTAT+CGG | - | chr8.4:76680812-76680831 | None:intergenic | 20.0% |
| !!! | TGAATCACATTTTTATAGAA+TGG | - | chr8.4:76678978-76678997 | None:intergenic | 20.0% |
| !!! | TTCTGGAGTATAATTATTTT+TGG | + | chr8.4:76679410-76679429 | MS.gene36627:intron | 20.0% |
| !!! | TTCTTTGTTTGTTTATAAGT+TGG | + | chr8.4:76677866-76677885 | MS.gene36627:intron | 20.0% |
| !!! | TTTTATCAAATAAATACCAG+TGG | - | chr8.4:76677739-76677758 | None:intergenic | 20.0% |
| ! | AGTTATGAAATGTGACTAAT+GGG | - | chr8.4:76678585-76678604 | None:intergenic | 25.0% |
| ! | ATAATCTAATTGAGAGGTTA+TGG | + | chr8.4:76680145-76680164 | MS.gene36627:intron | 25.0% |
| ! | CTTATTTGCCTTAATAAATG+AGG | + | chr8.4:76679833-76679852 | MS.gene36627:intron | 25.0% |
| ! | CTTGATTTATCATTGTTAAG+TGG | - | chr8.4:76680366-76680385 | None:intergenic | 25.0% |
| ! | GAGATTTATTTAGAGAATGT+TGG | + | chr8.4:76677904-76677923 | MS.gene36627:intron | 25.0% |
| ! | GATTAAAGCAAATAACTTTC+TGG | - | chr8.4:76678935-76678954 | None:intergenic | 25.0% |
| ! | TAACAATAAATGAGCACAAA+TGG | - | chr8.4:76678296-76678315 | None:intergenic | 25.0% |
| ! | TAGATCAACATGATTAAGAT+TGG | - | chr8.4:76677521-76677540 | None:intergenic | 25.0% |
| ! | TCATTCAAACTTCAATAAGA+AGG | - | chr8.4:76678265-76678284 | None:intergenic | 25.0% |
| ! | TGAAAGTTCCATTCATATTA+AGG | + | chr8.4:76680005-76680024 | MS.gene36627:CDS | 25.0% |
| ! | TTATATATTCAGCATCCAAT+AGG | + | chr8.4:76679448-76679467 | MS.gene36627:intron | 25.0% |
| ! | TTTCTGATAATCTAATTGAG+AGG | + | chr8.4:76680139-76680158 | MS.gene36627:intron | 25.0% |
| !! | ATAATATCTGGAATGTACTT+GGG | + | chr8.4:76679908-76679927 | MS.gene36627:CDS | 25.0% |
| !! | GACACTAAAAAAAGTCTTTT+TGG | - | chr8.4:76680826-76680845 | None:intergenic | 25.0% |
| !! | GCGTTTTCAATTAATTTTTC+TGG | + | chr8.4:76679393-76679412 | MS.gene36627:intron | 25.0% |
| !! | GTAATTGTTGATAAAGTAGA+CGG | + | chr8.4:76678027-76678046 | MS.gene36627:intron | 25.0% |
| !! | TTATGCTTTATATCCTGTTT+TGG | + | chr8.4:76680183-76680202 | MS.gene36627:intron | 25.0% |
| !!! | ACTTTTGAGAAGATAATATC+TGG | + | chr8.4:76679896-76679915 | MS.gene36627:CDS | 25.0% |
| !!! | ATAAACTGATTTTGTACTAG+AGG | + | chr8.4:76678316-76678335 | MS.gene36627:intron | 25.0% |
| !!! | TGAATTTTTAAAGGTCGATA+TGG | + | chr8.4:76680860-76680879 | MS.gene36627:intron | 25.0% |
| AAAAGCAATAGCGATATTGA+AGG | + | chr8.4:76677334-76677353 | MS.gene36627:CDS | 30.0% | |
| AAGAACTTCGATGATAATAC+TGG | - | chr8.4:76680653-76680672 | None:intergenic | 30.0% | |
| AATACCATAAAAGAGTTGCT+TGG | + | chr8.4:76681148-76681167 | MS.gene36627:CDS | 30.0% | |
| ATAGTAACATTCGTGATTGT+TGG | + | chr8.4:76680073-76680092 | MS.gene36627:intron | 30.0% | |
| CAGTTATGAAATGTGACTAA+TGG | - | chr8.4:76678586-76678605 | None:intergenic | 30.0% | |
| CATGTATGGTTGAAAATTTC+AGG | - | chr8.4:76679873-76679892 | None:intergenic | 30.0% | |
| GAATAGTCATACTCAGTTAA+TGG | - | chr8.4:76679758-76679777 | None:intergenic | 30.0% | |
| TCAATATATGAGACTGATGT+AGG | + | chr8.4:76679691-76679710 | MS.gene36627:intron | 30.0% | |
| TCGATGATAATACTGGTAAA+GGG | - | chr8.4:76680646-76680665 | None:intergenic | 30.0% | |
| TCTCATTCTTATTACCTTGA+TGG | + | chr8.4:76681247-76681266 | MS.gene36627:CDS | 30.0% | |
| TGAAGAAAGTGAAGATTTCA+AGG | + | chr8.4:76679043-76679062 | MS.gene36627:CDS | 30.0% | |
| TGATATGAACATAACAGCTT+TGG | + | chr8.4:76679329-76679348 | MS.gene36627:CDS | 30.0% | |
| TGTAAAGGTGAAAGAATAAC+TGG | - | chr8.4:76679224-76679243 | None:intergenic | 30.0% | |
| TTCGATGATAATACTGGTAA+AGG | - | chr8.4:76680647-76680666 | None:intergenic | 30.0% | |
| TTCTCAAAAGTCTACATGTA+TGG | - | chr8.4:76679887-76679906 | None:intergenic | 30.0% | |
| ! | AAAGTGAATTTTCTGACCTT+AGG | + | chr8.4:76680237-76680256 | MS.gene36627:intron | 30.0% |
| ! | ACGAATGTTGATAAAGTAGA+TGG | + | chr8.4:76678144-76678163 | MS.gene36627:intron | 30.0% |
| ! | AGTTTTCACTATCTTCTGTT+TGG | - | chr8.4:76680525-76680544 | None:intergenic | 30.0% |
| ! | GAGGTTATGGAGAATTTTTA+TGG | + | chr8.4:76680158-76680177 | MS.gene36627:intron | 30.0% |
| ! | GATAATATCTGGAATGTACT+TGG | + | chr8.4:76679907-76679926 | MS.gene36627:CDS | 30.0% |
| ! | TATAAGAAGCACATTAACCA+AGG | - | chr8.4:76680618-76680637 | None:intergenic | 30.0% |
| ! | TCGTAGAGTACTATACAAAA+TGG | + | chr8.4:76679940-76679959 | MS.gene36627:CDS | 30.0% |
| !! | AATGGAACTTTCAGTTTTGA+AGG | - | chr8.4:76679998-76680017 | None:intergenic | 30.0% |
| !! | TATAAGTTGGCTTTGTATCA+TGG | + | chr8.4:76677879-76677898 | MS.gene36627:intron | 30.0% |
| !!! | AGTTTTGTTGTCGTTTACAT+AGG | + | chr8.4:76679254-76679273 | MS.gene36627:intron | 30.0% |
| AACCTTATCAACTGGACAAA+AGG | + | chr8.4:76679140-76679159 | MS.gene36627:CDS | 35.0% | |
| AAGCAAACATCCATTTCTTC+TGG | + | chr8.4:76679116-76679135 | MS.gene36627:CDS | 35.0% | |
| AATAGGTCAATGATACAGTC+GGG | + | chr8.4:76679465-76679484 | MS.gene36627:intron | 35.0% | |
| AATGTTACTATGCATGCAAG+TGG | - | chr8.4:76680064-76680083 | None:intergenic | 35.0% | |
| ACTGATGTAGGTTATCAACA+TGG | + | chr8.4:76679703-76679722 | MS.gene36627:intron | 35.0% | |
| AGAAAAGCAATTGAGAGACA+AGG | + | chr8.4:76679303-76679322 | MS.gene36627:CDS | 35.0% | |
| AGAAACCATCTCAAGTTATG+AGG | - | chr8.4:76680124-76680143 | None:intergenic | 35.0% | |
| AGCAAACATCCATTTCTTCT+GGG | + | chr8.4:76679117-76679136 | MS.gene36627:CDS | 35.0% | |
| AGCGATATTGAAGGAATTTG+AGG | + | chr8.4:76677343-76677362 | MS.gene36627:CDS | 35.0% | |
| AGGTGAAAGAATAACTGGAA+AGG | - | chr8.4:76679219-76679238 | None:intergenic | 35.0% | |
| AGTCATACTCAGTTAATGGA+AGG | - | chr8.4:76679754-76679773 | None:intergenic | 35.0% | |
| ATCGTTGAACACTCAAATGA+TGG | + | chr8.4:76681193-76681212 | MS.gene36627:CDS | 35.0% | |
| CAATAGGTCAATGATACAGT+CGG | + | chr8.4:76679464-76679483 | MS.gene36627:intron | 35.0% | |
| CATCAAAGCAATTAGGATTC+AGG | - | chr8.4:76679191-76679210 | None:intergenic | 35.0% | |
| CGATGATAATACTGGTAAAG+GGG | - | chr8.4:76680645-76680664 | None:intergenic | 35.0% | |
| GAAGTTGCTAGTTGACAATT+GGG | + | chr8.4:76678511-76678530 | MS.gene36627:intron | 35.0% | |
| GGTCATGTTTCTCATACAAA+TGG | - | chr8.4:76678957-76678976 | None:intergenic | 35.0% | |
| GTCAATTCCTCCAAATTTGA+TGG | + | chr8.4:76678830-76678849 | MS.gene36627:CDS | 35.0% | |
| GTTTGGAGAGAAATTGAACT+TGG | - | chr8.4:76680508-76680527 | None:intergenic | 35.0% | |
| TCAAAAAAGTGATACCCTGT+AGG | - | chr8.4:76677497-76677516 | None:intergenic | 35.0% | |
| TCGGCTATACGAATGAAATT+AGG | - | chr8.4:76677608-76677627 | None:intergenic | 35.0% | |
| TTGTGTAAGCAATATTCGCA+TGG | - | chr8.4:76680568-76680587 | None:intergenic | 35.0% | |
| TTTCTCCTCATAACTTGAGA+TGG | + | chr8.4:76680116-76680135 | MS.gene36627:intron | 35.0% | |
| ! | ATAAAAGAGTTGCTTGGTGA+AGG | + | chr8.4:76681154-76681173 | MS.gene36627:CDS | 35.0% |
| ! | ATTCCTCCAAATTTGATGGT+CGG | + | chr8.4:76678834-76678853 | MS.gene36627:CDS | 35.0% |
| ! | CAAACTGAAGGAGATTTTAG+AGG | + | chr8.4:76680763-76680782 | MS.gene36627:CDS | 35.0% |
| ! | CTATTTTATGCATTGGACCT+TGG | + | chr8.4:76678732-76678751 | MS.gene36627:CDS | 35.0% |
| ! | GATTGTGAACATTTGTTGCT+TGG | + | chr8.4:76678390-76678409 | MS.gene36627:intron | 35.0% |
| ! | GGAAGGACTATTTTATGCAT+TGG | + | chr8.4:76678725-76678744 | MS.gene36627:CDS | 35.0% |
| ! | TCTTTTTCCAGTACCTTCTT+AGG | + | chr8.4:76680310-76680329 | MS.gene36627:intron | 35.0% |
| ! | TGACATCCTTGTTTGTATGT+CGG | - | chr8.4:76679505-76679524 | None:intergenic | 35.0% |
| ! | TTCACCAAGCAACTCTTTTA+TGG | - | chr8.4:76681155-76681174 | None:intergenic | 35.0% |
| ! | TTGTTGTCGTTTACATAGGT+TGG | + | chr8.4:76679258-76679277 | MS.gene36627:intron | 35.0% |
| !! | CTCTAAAATCTCCTTCAGTT+TGG | - | chr8.4:76680765-76680784 | None:intergenic | 35.0% |
| !! | GGAAAAGCATCAAAGCAATT+AGG | - | chr8.4:76679198-76679217 | None:intergenic | 35.0% |
| !! | TCGTTGATAATCTTCCTACA+GGG | + | chr8.4:76677480-76677499 | MS.gene36627:CDS | 35.0% |
| !! | TTCGTTGATAATCTTCCTAC+AGG | + | chr8.4:76677479-76677498 | MS.gene36627:CDS | 35.0% |
| !!! | GTCATTGCTGCTGTTATTTT+AGG | + | chr8.4:76679521-76679540 | MS.gene36627:CDS | 35.0% |
| AACCACCTTTCTCACTTCTA+GGG | - | chr8.4:76680951-76680970 | None:intergenic | 40.0% | |
| AAGAATGTGATAGCCATGGA+TGG | + | chr8.4:76681082-76681101 | MS.gene36627:CDS | 40.0% | |
| ACAAAATGGCTGAAGAAGCT+TGG | + | chr8.4:76679954-76679973 | MS.gene36627:CDS | 40.0% | |
| ACCATAAGAATTTGACGTGC+AGG | + | chr8.4:76680681-76680700 | MS.gene36627:intron | 40.0% | |
| ATGCCCTGAACACTAAAATG+AGG | - | chr8.4:76680291-76680310 | None:intergenic | 40.0% | |
| ATTTGGAGGAATTGACACCT+CGG | - | chr8.4:76678826-76678845 | None:intergenic | 40.0% | |
| CAAAAAGGAACGGAGTTAAG+CGG | - | chr8.4:76680897-76680916 | None:intergenic | 40.0% | |
| CAAGCAATACCAAAATGGCA+TGG | + | chr8.4:76679578-76679597 | MS.gene36627:CDS | 40.0% | |
| CATATGTGTCTGTGTCATGT+TGG | + | chr8.4:76677778-76677797 | MS.gene36627:intron | 40.0% | |
| CGAAGTTGCTAGTTGACAAT+TGG | + | chr8.4:76678510-76678529 | MS.gene36627:intron | 40.0% | |
| CGACTGTATCATTGACCTAT+TGG | - | chr8.4:76679466-76679485 | None:intergenic | 40.0% | |
| CTTTACATCCCTCTCTGTTT+AGG | + | chr8.4:76678697-76678716 | MS.gene36627:intron | 40.0% | |
| GAAATGGATGTTTGCTTGAC+AGG | - | chr8.4:76679113-76679132 | None:intergenic | 40.0% | |
| GAACACTCAAATGATGGTTC+AGG | + | chr8.4:76681199-76681218 | MS.gene36627:CDS | 40.0% | |
| GATAAGGTTCCCAGAAGAAA+TGG | - | chr8.4:76679129-76679148 | None:intergenic | 40.0% | |
| GGAAAAGATACCATCACCAA+TGG | + | chr8.4:76681049-76681068 | MS.gene36627:CDS | 40.0% | |
| GTAACATTCGTGATTGTTGG+TGG | + | chr8.4:76680076-76680095 | MS.gene36627:intron | 40.0% | |
| GTAGGTTATCAACATGGAGT+GGG | + | chr8.4:76679709-76679728 | MS.gene36627:intron | 40.0% | |
| GTCCATGTTTCAAATACCAG+TGG | - | chr8.4:76677691-76677710 | None:intergenic | 40.0% | |
| GTGCTCAAGCAATACCAAAA+TGG | + | chr8.4:76679573-76679592 | MS.gene36627:CDS | 40.0% | |
| TAGGTTATCAACATGGAGTG+GGG | + | chr8.4:76679710-76679729 | MS.gene36627:intron | 40.0% | |
| TCAAATGATGGTTCAGGAAC+TGG | + | chr8.4:76681205-76681224 | MS.gene36627:CDS | 40.0% | |
| TCAGAAGAATGTGATAGCCA+TGG | + | chr8.4:76681078-76681097 | MS.gene36627:CDS | 40.0% | |
| TCCTGCACGTCAAATTCTTA+TGG | - | chr8.4:76680685-76680704 | None:intergenic | 40.0% | |
| TGTAGGTTATCAACATGGAG+TGG | + | chr8.4:76679708-76679727 | MS.gene36627:intron | 40.0% | |
| TGTGGTCAAAACCAAACTGA+AGG | + | chr8.4:76680751-76680770 | MS.gene36627:CDS | 40.0% | |
| TTGCTTGACAGGAAAGGAAA+AGG | - | chr8.4:76679102-76679121 | None:intergenic | 40.0% | |
| TTTGACCACATTGAGATCAG+CGG | - | chr8.4:76680741-76680760 | None:intergenic | 40.0% | |
| ! | CACCACTGGTATTTGAAACA+TGG | + | chr8.4:76677686-76677705 | MS.gene36627:intron | 40.0% |
| ! | GATGATTCCTAAGAAGGTAC+TGG | - | chr8.4:76680320-76680339 | None:intergenic | 40.0% |
| ! | GCTCTAGATGATTCCTAAGA+AGG | - | chr8.4:76680326-76680345 | None:intergenic | 40.0% |
| ! | GGTATTTGAAACATGGACAC+CGG | + | chr8.4:76677693-76677712 | MS.gene36627:intron | 40.0% |
| ! | GTGGGAATTCTGAAGAAGTT+GGG | + | chr8.4:76681028-76681047 | MS.gene36627:CDS | 40.0% |
| ! | TTAATGGAAGGTGTGATGAC+CGG | - | chr8.4:76679742-76679761 | None:intergenic | 40.0% |
| ! | TTCCTCCAAATTTGATGGTC+GGG | + | chr8.4:76678835-76678854 | MS.gene36627:CDS | 40.0% |
| ! | TTTTATGCATTGGACCTTGG+AGG | + | chr8.4:76678735-76678754 | MS.gene36627:CDS | 40.0% |
| !! | AGCCTTTTGTCCAGTTGATA+AGG | - | chr8.4:76679145-76679164 | None:intergenic | 40.0% |
| !! | AGGCTTTGAAACATGTACAC+CGG | + | chr8.4:76677645-76677664 | MS.gene36627:intron | 40.0% |
| !! | TGGCCTCATTTTAGTGTTCA+GGG | + | chr8.4:76680285-76680304 | MS.gene36627:intron | 40.0% |
| !!! | GCTGAAGAAGCTTGGTTTTT+TGG | + | chr8.4:76679962-76679981 | MS.gene36627:CDS | 40.0% |
| !!! | GCTGCTGTTATTTTAGGTAC+CGG | + | chr8.4:76679527-76679546 | MS.gene36627:CDS | 40.0% |
| !!! | TTATATCCTGTTTTGGCCTC+TGG | + | chr8.4:76680190-76680209 | MS.gene36627:intron | 40.0% |
| AATGTGATAGCCATGGATGG+CGG | + | chr8.4:76681085-76681104 | MS.gene36627:CDS | 45.0% | |
| ACAGGTTGCTGATGCAATGA+CGG | + | chr8.4:76677397-76677416 | MS.gene36627:CDS | 45.0% | |
| ACCAACGTTGAAGCTGAAAC+AGG | + | chr8.4:76677379-76677398 | MS.gene36627:CDS | 45.0% | |
| ACCTGTTTCAGCTTCAACGT+TGG | - | chr8.4:76677383-76677402 | None:intergenic | 45.0% | |
| ACGTGAAGAAATCGAAGCGA+TGG | + | chr8.4:76677309-76677328 | MS.gene36627:CDS | 45.0% | |
| ACTCACCATTTCTCCAGACT+TGG | - | chr8.4:76679612-76679631 | None:intergenic | 45.0% | |
| CAACCACCTTTCTCACTTCT+AGG | - | chr8.4:76680952-76680971 | None:intergenic | 45.0% | |
| CACGAAAGTTAGTTCCTCCA+AGG | - | chr8.4:76678752-76678771 | None:intergenic | 45.0% | |
| CGTGAAGAAATCGAAGCGAT+GGG | + | chr8.4:76677310-76677329 | MS.gene36627:CDS | 45.0% | |
| CGTGTATTACGTGTGCAACT+TGG | + | chr8.4:76678768-76678787 | MS.gene36627:CDS | 45.0% | |
| CTCACCATTTCTCCAGACTT+GGG | - | chr8.4:76679611-76679630 | None:intergenic | 45.0% | |
| GAAGATTTCAAGGTTCCTCC+AGG | + | chr8.4:76679053-76679072 | MS.gene36627:CDS | 45.0% | |
| GACACTAAACAAGTCACCAC+TGG | + | chr8.4:76677720-76677739 | MS.gene36627:intron | 45.0% | |
| GAGTTTAAACCCTGGTGAAC+AGG | + | chr8.4:76679790-76679809 | MS.gene36627:CDS | 45.0% | |
| GATGCTGAGAGTTTAAACCC+TGG | + | chr8.4:76679782-76679801 | MS.gene36627:CDS | 45.0% | |
| GATGTCCCGACCATCAAATT+TGG | - | chr8.4:76678843-76678862 | None:intergenic | 45.0% | |
| GCAATTGTACCTGTTCACCA+GGG | - | chr8.4:76679802-76679821 | None:intergenic | 45.0% | |
| GGATGTTTGCTTGACAGGAA+AGG | - | chr8.4:76679108-76679127 | None:intergenic | 45.0% | |
| GTATTACGTGTGCAACTTGG+TGG | + | chr8.4:76678771-76678790 | MS.gene36627:CDS | 45.0% | |
| GTGAAGAAATCGAAGCGATG+GGG | + | chr8.4:76677311-76677330 | MS.gene36627:CDS | 45.0% | |
| TACCTCCCTAGAAGTGAGAA+AGG | + | chr8.4:76680943-76680962 | MS.gene36627:CDS | 45.0% | |
| TCCTCGTTCCTAAACAGAGA+GGG | - | chr8.4:76678708-76678727 | None:intergenic | 45.0% | |
| TCGATGCTAGAGAGTTGTTG+AGG | + | chr8.4:76677831-76677850 | MS.gene36627:intron | 45.0% | |
| TCTCTGTTTAGGAACGAGGA+AGG | + | chr8.4:76678708-76678727 | MS.gene36627:intron | 45.0% | |
| TGCAATATTGTTGCTACCCG+TGG | + | chr8.4:76680980-76680999 | MS.gene36627:CDS | 45.0% | |
| TGTCAGTCGAGAATTTACCG+AGG | + | chr8.4:76678806-76678825 | MS.gene36627:CDS | 45.0% | |
| TTCCTCGTTCCTAAACAGAG+AGG | - | chr8.4:76678709-76678728 | None:intergenic | 45.0% | |
| TTTGCCCAAGTCTGGAGAAA+TGG | + | chr8.4:76679604-76679623 | MS.gene36627:CDS | 45.0% | |
| ! | AAAGCCTTATCCCACCAAGT+GGG | - | chr8.4:76677632-76677651 | None:intergenic | 45.0% |
| ! | CGTGGGAATTCTGAAGAAGT+TGG | + | chr8.4:76681027-76681046 | MS.gene36627:CDS | 45.0% |
| ! | CTTCTGGGAACCTTATCAAC+TGG | + | chr8.4:76679132-76679151 | MS.gene36627:CDS | 45.0% |
| ! | GACTTGTTTAGTGTCGTGTC+CGG | - | chr8.4:76677715-76677734 | None:intergenic | 45.0% |
| ! | GTTGCTTGGTGAAGGTGTAT+CGG | + | chr8.4:76681162-76681181 | MS.gene36627:CDS | 45.0% |
| !! | AACGAGGCAGGATAGTTTTG+TGG | + | chr8.4:76680265-76680284 | MS.gene36627:intron | 45.0% |
| !! | ATAGGTTGGTCAGGATGTTG+TGG | + | chr8.4:76679272-76679291 | MS.gene36627:intron | 45.0% |
| !! | GGCAAATCACCATGCCATTT+TGG | - | chr8.4:76679590-76679609 | None:intergenic | 45.0% |
| !! | GTCGTTTACATAGGTTGGTC+AGG | + | chr8.4:76679263-76679282 | MS.gene36627:intron | 45.0% |
| !! | GTGGCCTCATTTTAGTGTTC+AGG | + | chr8.4:76680284-76680303 | MS.gene36627:intron | 45.0% |
| !! | TTAAAATTTCTATAAAAAAT+GGG | + | chr8.4:76677970-76677989 | MS.gene36627:intron | 5.0% |
| !!! | TTTAAAATTTCTATAAAAAA+TGG | + | chr8.4:76677969-76677988 | MS.gene36627:intron | 5.0% |
| AAGTAGTCTGCTCCAACCAG+AGG | - | chr8.4:76680209-76680228 | None:intergenic | 50.0% | |
| ACATGGAGTGGGGAAACTTC+CGG | + | chr8.4:76679720-76679739 | MS.gene36627:CDS | 50.0% | |
| AGATACCATCACCAATGGCG+AGG | + | chr8.4:76681054-76681073 | MS.gene36627:CDS | 50.0% | |
| AGCGGATGAGTCATGATGCA+TGG | - | chr8.4:76680723-76680742 | None:intergenic | 50.0% | |
| AGGTTCCTCCAGGTAGAAAG+AGG | + | chr8.4:76679063-76679082 | MS.gene36627:CDS | 50.0% | |
| ATTCTTCTGACCCTCGCCAT+TGG | - | chr8.4:76681068-76681087 | None:intergenic | 50.0% | |
| CACGTACGCTGCATTTGTTC+CGG | - | chr8.4:76679549-76679568 | None:intergenic | 50.0% | |
| CGCAATTGTACCTGTTCACC+AGG | - | chr8.4:76679803-76679822 | None:intergenic | 50.0% | |
| CTCATATAGTCCGCCATCCA+TGG | - | chr8.4:76681098-76681117 | None:intergenic | 50.0% | |
| CTCATCCGCTGATCTCAATG+TGG | + | chr8.4:76680733-76680752 | MS.gene36627:CDS | 50.0% | |
| CTCCCTAGAAGTGAGAAAGG+TGG | + | chr8.4:76680946-76680965 | MS.gene36627:CDS | 50.0% | |
| CTGACCTTAGGTCTTCAACG+AGG | + | chr8.4:76680249-76680268 | MS.gene36627:intron | 50.0% | |
| CTTATCCCACCAAGTGGGAT+CGG | - | chr8.4:76677627-76677646 | None:intergenic | 50.0% | |
| CTTTCTGCAGCTGGTATCGT+GGG | + | chr8.4:76681010-76681029 | MS.gene36627:CDS | 50.0% | |
| GACACTAAACACGTCACCAC+TGG | + | chr8.4:76677672-76677691 | MS.gene36627:intron | 50.0% | |
| GACGTGTTTAGTGTCGTGTC+CGG | - | chr8.4:76677667-76677686 | None:intergenic | 50.0% | |
| GATACAGTCGGGACATTAGC+TGG | + | chr8.4:76679476-76679495 | MS.gene36627:CDS | 50.0% | |
| GATACCATCACCAATGGCGA+GGG | + | chr8.4:76681055-76681074 | MS.gene36627:CDS | 50.0% | |
| GGTTCCTCCAGGTAGAAAGA+GGG | + | chr8.4:76679064-76679083 | MS.gene36627:CDS | 50.0% | |
| GTCCCGACCATCAAATTTGG+AGG | - | chr8.4:76678840-76678859 | None:intergenic | 50.0% | |
| TATAGCCGATCCCACTTGGT+GGG | + | chr8.4:76677619-76677638 | MS.gene36627:intron | 50.0% | |
| TCCCTCTCTGTTTAGGAACG+AGG | + | chr8.4:76678704-76678723 | MS.gene36627:intron | 50.0% | |
| TCTTTCTGCAGCTGGTATCG+TGG | + | chr8.4:76681009-76681028 | MS.gene36627:CDS | 50.0% | |
| TGATGCATGGCAGACATGTC+AGG | - | chr8.4:76680710-76680729 | None:intergenic | 50.0% | |
| TGGAGGCCGACATACAAACA+AGG | + | chr8.4:76679496-76679515 | MS.gene36627:CDS | 50.0% | |
| TTCGTATAGCCGATCCCACT+TGG | + | chr8.4:76677615-76677634 | MS.gene36627:intron | 50.0% | |
| ! | CAAAGCCTTATCCCACCAAG+TGG | - | chr8.4:76677633-76677652 | None:intergenic | 50.0% |
| ! | CACCTTTCTCACTTCTAGGG+AGG | - | chr8.4:76680948-76680967 | None:intergenic | 50.0% |
| ! | CATGGTGATTTGCCCAAGTC+TGG | + | chr8.4:76679596-76679615 | MS.gene36627:CDS | 50.0% |
| !!! | ATCCTGTTTTGGCCTCTGGT+TGG | + | chr8.4:76680194-76680213 | MS.gene36627:intron | 50.0% |
| ACAGTCGGGACATTAGCTGG+AGG | + | chr8.4:76679479-76679498 | MS.gene36627:CDS | 55.0% | |
| AGCTCCCTCTTTCTACCTGG+AGG | - | chr8.4:76679071-76679090 | None:intergenic | 55.0% | |
| CCAGGTAGAAAGAGGGAGCT+AGG | + | chr8.4:76679071-76679090 | MS.gene36627:CDS | 55.0% | |
| CCTAGCTCCCTCTTTCTACC+TGG | - | chr8.4:76679074-76679093 | None:intergenic | 55.0% | |
| CCTGCCTCGTTGAAGACCTA+AGG | - | chr8.4:76680256-76680275 | None:intergenic | 55.0% | |
| CCTTAGGTCTTCAACGAGGC+AGG | + | chr8.4:76680253-76680272 | MS.gene36627:intron | 55.0% | |
| CGGAACAAATGCAGCGTACG+TGG | + | chr8.4:76679547-76679566 | MS.gene36627:CDS | 55.0% | |
| CTCCAACCAGAGGCCAAAAC+AGG | - | chr8.4:76680199-76680218 | None:intergenic | 55.0% | |
| CTGCAGAAAGACGAGCACCA+CGG | - | chr8.4:76681000-76681019 | None:intergenic | 55.0% | |
| GGTTGCTGATGCAATGACGG+TGG | + | chr8.4:76677400-76677419 | MS.gene36627:CDS | 55.0% | |
| GTATAGCCGATCCCACTTGG+TGG | + | chr8.4:76677618-76677637 | MS.gene36627:intron | 55.0% | |
| TGCAGAAAGACGAGCACCAC+GGG | - | chr8.4:76680999-76681018 | None:intergenic | 55.0% | |
| ! | ACGTGTGCAACTTGGTGGCA+AGG | + | chr8.4:76678776-76678795 | MS.gene36627:CDS | 55.0% |
| ! | CGATCCCACTTGGTGGGATA+AGG | + | chr8.4:76677625-76677644 | MS.gene36627:intron | 55.0% |
| ! | GTGCAACTTGGTGGCAAGGA+TGG | + | chr8.4:76678780-76678799 | MS.gene36627:CDS | 55.0% |
| !! | CACGCTGGTCTTGCTTCTGA+TGG | + | chr8.4:76677428-76677447 | MS.gene36627:CDS | 55.0% |
| !! | GCTGGTCTTGCTTCTGATGG+TGG | + | chr8.4:76677431-76677450 | MS.gene36627:CDS | 55.0% |
| ATGACGGTGGAGATGCACGC+TGG | + | chr8.4:76677413-76677432 | MS.gene36627:CDS | 60.0% | |
| CTGACCCTCGCCATTGGTGA+TGG | - | chr8.4:76681062-76681081 | None:intergenic | 60.0% | |
| GGTGCTCGTCTTTCTGCAGC+TGG | + | chr8.4:76681001-76681020 | MS.gene36627:CDS | 60.0% | |
| TGCGACGGTGATCGGAGCAA+CGG | + | chr8.4:76677250-76677269 | MS.gene36627:CDS | 60.0% | |
| ! | AAAGGTGGTGGCGTGTGCGA+CGG | + | chr8.4:76677235-76677254 | MS.gene36627:CDS | 60.0% |
| GACGGTGATCGGAGCAACGG+CGG | + | chr8.4:76677253-76677272 | MS.gene36627:CDS | 65.0% | |
| GTGGCGTGTGCGACGGTGAT+CGG | + | chr8.4:76677242-76677261 | MS.gene36627:CDS | 65.0% | |
| AGCAACGGCGGCGTGTGTGG+TGG | + | chr8.4:76677265-76677284 | MS.gene36627:CDS | 70.0% | |
| CGGAGCAACGGCGGCGTGTG+TGG | + | chr8.4:76677262-76677281 | MS.gene36627:CDS | 75.0% | |
| ! | GGCGGCGTGTGTGGTGGCGA+CGG | + | chr8.4:76677271-76677290 | MS.gene36627:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 76677230 | 76681273 | 76677230 | ID=MS.gene36627 |
| chr8.4 | mRNA | 76677230 | 76681273 | 76677230 | ID=MS.gene36627.t1;Parent=MS.gene36627 |
| chr8.4 | exon | 76677230 | 76677501 | 76677230 | ID=MS.gene36627.t1.exon1;Parent=MS.gene36627.t1 |
| chr8.4 | CDS | 76677230 | 76677501 | 76677230 | ID=cds.MS.gene36627.t1;Parent=MS.gene36627.t1 |
| chr8.4 | exon | 76678719 | 76678866 | 76678719 | ID=MS.gene36627.t1.exon2;Parent=MS.gene36627.t1 |
| chr8.4 | CDS | 76678719 | 76678866 | 76678719 | ID=cds.MS.gene36627.t1;Parent=MS.gene36627.t1 |
| chr8.4 | exon | 76678999 | 76679181 | 76678999 | ID=MS.gene36627.t1.exon3;Parent=MS.gene36627.t1 |
| chr8.4 | CDS | 76678999 | 76679181 | 76678999 | ID=cds.MS.gene36627.t1;Parent=MS.gene36627.t1 |
| chr8.4 | exon | 76679276 | 76679350 | 76679276 | ID=MS.gene36627.t1.exon4;Parent=MS.gene36627.t1 |
| chr8.4 | CDS | 76679276 | 76679350 | 76679276 | ID=cds.MS.gene36627.t1;Parent=MS.gene36627.t1 |
| chr8.4 | exon | 76679470 | 76679625 | 76679470 | ID=MS.gene36627.t1.exon5;Parent=MS.gene36627.t1 |
| chr8.4 | CDS | 76679470 | 76679625 | 76679470 | ID=cds.MS.gene36627.t1;Parent=MS.gene36627.t1 |
| chr8.4 | exon | 76679713 | 76679811 | 76679713 | ID=MS.gene36627.t1.exon6;Parent=MS.gene36627.t1 |
| chr8.4 | CDS | 76679713 | 76679811 | 76679713 | ID=cds.MS.gene36627.t1;Parent=MS.gene36627.t1 |
| chr8.4 | exon | 76679896 | 76680026 | 76679896 | ID=MS.gene36627.t1.exon7;Parent=MS.gene36627.t1 |
| chr8.4 | CDS | 76679896 | 76680026 | 76679896 | ID=cds.MS.gene36627.t1;Parent=MS.gene36627.t1 |
| chr8.4 | exon | 76680703 | 76680784 | 76680703 | ID=MS.gene36627.t1.exon8;Parent=MS.gene36627.t1 |
| chr8.4 | CDS | 76680703 | 76680784 | 76680703 | ID=cds.MS.gene36627.t1;Parent=MS.gene36627.t1 |
| chr8.4 | exon | 76680935 | 76681273 | 76680935 | ID=MS.gene36627.t1.exon9;Parent=MS.gene36627.t1 |
| chr8.4 | CDS | 76680935 | 76681273 | 76680935 | ID=cds.MS.gene36627.t1;Parent=MS.gene36627.t1 |
| Gene Sequence |
| Protein sequence |
