Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37187.t1 | XP_013451116.1 | 98.1 | 513 | 8 | 1 | 1 | 511 | 1 | 513 | 3.60E-292 | 1013.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37187.t1 | Q4V398 | 72.0 | 496 | 136 | 2 | 16 | 510 | 10 | 503 | 1.2e-214 | 747.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37187.t1 | A0A072U6Z8 | 98.1 | 513 | 8 | 1 | 1 | 511 | 1 | 513 | 2.6e-292 | 1013.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05081 | MS.gene37187 | -0.808492 | 3.02E-50 | -1.69E-46 |
MS.gene051552 | MS.gene37187 | 0.811644 | 6.32E-51 | -1.69E-46 |
MS.gene051838 | MS.gene37187 | -0.826432 | 2.72E-54 | -1.69E-46 |
MS.gene052503 | MS.gene37187 | -0.803829 | 2.89E-49 | -1.69E-46 |
MS.gene052823 | MS.gene37187 | -0.80359 | 3.24E-49 | -1.69E-46 |
MS.gene052825 | MS.gene37187 | -0.815997 | 6.94E-52 | -1.69E-46 |
MS.gene053480 | MS.gene37187 | -0.805553 | 1.26E-49 | -1.69E-46 |
MS.gene053824 | MS.gene37187 | -0.809066 | 2.27E-50 | -1.69E-46 |
MS.gene054344 | MS.gene37187 | -0.817263 | 3.61E-52 | -1.69E-46 |
MS.gene055577 | MS.gene37187 | -0.825925 | 3.59E-54 | -1.69E-46 |
MS.gene056877 | MS.gene37187 | -0.828463 | 8.87E-55 | -1.69E-46 |
MS.gene057196 | MS.gene37187 | -0.804516 | 2.08E-49 | -1.69E-46 |
MS.gene057332 | MS.gene37187 | -0.801657 | 8.12E-49 | -1.69E-46 |
MS.gene057658 | MS.gene37187 | -0.834631 | 2.68E-56 | -1.69E-46 |
MS.gene05837 | MS.gene37187 | -0.806578 | 7.68E-50 | -1.69E-46 |
MS.gene058418 | MS.gene37187 | 0.840784 | 7.06E-58 | -1.69E-46 |
MS.gene058444 | MS.gene37187 | -0.813223 | 2.85E-51 | -1.69E-46 |
MS.gene059023 | MS.gene37187 | -0.845042 | 5.20E-59 | -1.69E-46 |
MS.gene059103 | MS.gene37187 | 0.801438 | 9.00E-49 | -1.69E-46 |
MS.gene05914 | MS.gene37187 | -0.803797 | 2.94E-49 | -1.69E-46 |
MS.gene059303 | MS.gene37187 | -0.828007 | 1.14E-54 | -1.69E-46 |
MS.gene06092 | MS.gene37187 | -0.804823 | 1.79E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene37187 | MS.gene96774 | PPI |
MS.gene53071 | MS.gene37187 | PPI |
MS.gene031478 | MS.gene37187 | PPI |
MS.gene37187 | MS.gene045607 | PPI |
MS.gene37187 | MS.gene006809 | PPI |
MS.gene55283 | MS.gene37187 | PPI |
MS.gene37187 | MS.gene56517 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37187.t1 | MTR_6g016015 | 98.051 | 513 | 8 | 1 | 1 | 511 | 1 | 513 | 0.0 | 1039 |
MS.gene37187.t1 | MTR_4g110030 | 77.801 | 473 | 100 | 2 | 44 | 511 | 43 | 515 | 0.0 | 778 |
MS.gene37187.t1 | MTR_2g059350 | 75.625 | 480 | 111 | 3 | 32 | 510 | 39 | 513 | 0.0 | 768 |
MS.gene37187.t1 | MTR_4g082310 | 59.006 | 483 | 196 | 2 | 23 | 505 | 8 | 488 | 0.0 | 602 |
MS.gene37187.t1 | MTR_5g042200 | 58.686 | 472 | 182 | 4 | 43 | 505 | 9 | 476 | 0.0 | 594 |
MS.gene37187.t1 | MTR_4g125460 | 49.105 | 391 | 192 | 5 | 112 | 501 | 88 | 472 | 2.02e-132 | 393 |
MS.gene37187.t1 | MTR_4g019210 | 50.126 | 397 | 179 | 5 | 112 | 501 | 231 | 615 | 9.51e-132 | 397 |
MS.gene37187.t1 | MTR_5g064620 | 50.249 | 402 | 191 | 4 | 112 | 505 | 110 | 510 | 4.13e-131 | 391 |
MS.gene37187.t1 | MTR_4g125460 | 49.105 | 391 | 192 | 5 | 112 | 501 | 227 | 611 | 6.62e-131 | 394 |
MS.gene37187.t1 | MTR_5g081690 | 49.357 | 389 | 190 | 5 | 114 | 501 | 122 | 504 | 8.28e-130 | 388 |
MS.gene37187.t1 | MTR_3g099480 | 50.873 | 401 | 185 | 5 | 113 | 505 | 140 | 536 | 6.47e-129 | 386 |
MS.gene37187.t1 | MTR_3g096020 | 46.437 | 407 | 204 | 7 | 108 | 505 | 184 | 585 | 3.46e-120 | 365 |
MS.gene37187.t1 | MTR_3g115220 | 43.434 | 396 | 208 | 9 | 112 | 505 | 110 | 491 | 2.30e-96 | 303 |
MS.gene37187.t1 | MTR_4g100810 | 42.683 | 410 | 218 | 9 | 106 | 511 | 101 | 497 | 1.07e-95 | 300 |
MS.gene37187.t1 | MTR_5g099010 | 41.837 | 392 | 211 | 7 | 116 | 505 | 122 | 498 | 4.13e-93 | 295 |
MS.gene37187.t1 | MTR_5g012770 | 42.543 | 409 | 207 | 10 | 106 | 510 | 117 | 501 | 2.11e-90 | 286 |
MS.gene37187.t1 | MTR_5g032100 | 35.047 | 428 | 232 | 9 | 112 | 505 | 85 | 500 | 2.06e-81 | 262 |
MS.gene37187.t1 | MTR_3g086570 | 37.209 | 387 | 221 | 6 | 112 | 482 | 149 | 529 | 8.96e-81 | 262 |
MS.gene37187.t1 | MTR_3g100310 | 35.000 | 440 | 235 | 11 | 104 | 505 | 88 | 514 | 1.62e-80 | 260 |
MS.gene37187.t1 | MTR_4g084570 | 36.010 | 411 | 233 | 10 | 112 | 505 | 149 | 546 | 2.96e-80 | 261 |
MS.gene37187.t1 | MTR_5g059260 | 37.650 | 417 | 231 | 11 | 114 | 511 | 158 | 564 | 3.62e-80 | 261 |
MS.gene37187.t1 | MTR_2g016470 | 37.500 | 416 | 220 | 9 | 96 | 472 | 172 | 586 | 7.76e-79 | 258 |
MS.gene37187.t1 | MTR_1g031590 | 35.280 | 411 | 236 | 10 | 112 | 505 | 148 | 545 | 2.52e-78 | 255 |
MS.gene37187.t1 | MTR_3g005340 | 37.922 | 385 | 220 | 8 | 101 | 471 | 135 | 514 | 2.81e-78 | 256 |
MS.gene37187.t1 | MTR_1g102030 | 39.691 | 388 | 216 | 9 | 96 | 470 | 72 | 454 | 9.76e-77 | 250 |
MS.gene37187.t1 | MTR_3g026650 | 38.503 | 374 | 216 | 6 | 116 | 485 | 176 | 539 | 1.51e-75 | 248 |
MS.gene37187.t1 | MTR_4g132590 | 34.852 | 439 | 228 | 11 | 113 | 505 | 65 | 491 | 2.14e-68 | 228 |
MS.gene37187.t1 | MTR_4g023030 | 36.031 | 383 | 213 | 7 | 116 | 485 | 236 | 599 | 1.88e-67 | 228 |
MS.gene37187.t1 | MTR_4g132590 | 34.852 | 439 | 228 | 11 | 113 | 505 | 164 | 590 | 5.29e-67 | 226 |
MS.gene37187.t1 | MTR_3g026650 | 38.871 | 319 | 184 | 5 | 116 | 430 | 176 | 487 | 5.33e-62 | 211 |
MS.gene37187.t1 | MTR_3g086570 | 38.194 | 288 | 158 | 5 | 112 | 383 | 149 | 432 | 3.25e-61 | 207 |
MS.gene37187.t1 | MTR_4g010990 | 34.783 | 345 | 206 | 7 | 112 | 452 | 74 | 403 | 4.04e-59 | 202 |
MS.gene37187.t1 | MTR_7g064210 | 56.069 | 173 | 62 | 3 | 226 | 385 | 17 | 188 | 9.97e-58 | 197 |
MS.gene37187.t1 | MTR_1g101990 | 42.007 | 269 | 146 | 6 | 221 | 485 | 1 | 263 | 4.93e-54 | 184 |
MS.gene37187.t1 | MTR_4g010990 | 33.435 | 329 | 200 | 7 | 128 | 452 | 1 | 314 | 2.17e-51 | 179 |
MS.gene37187.t1 | MTR_3g092590 | 35.473 | 296 | 175 | 6 | 112 | 393 | 89 | 382 | 4.43e-45 | 167 |
MS.gene37187.t1 | MTR_3g092590 | 35.473 | 296 | 175 | 6 | 112 | 393 | 89 | 382 | 1.97e-44 | 166 |
MS.gene37187.t1 | MTR_7g017330 | 31.908 | 304 | 177 | 8 | 112 | 394 | 97 | 391 | 4.15e-40 | 154 |
MS.gene37187.t1 | MTR_3g026650 | 38.767 | 227 | 128 | 5 | 116 | 338 | 176 | 395 | 2.85e-37 | 142 |
MS.gene37187.t1 | MTR_1g007390 | 29.592 | 392 | 234 | 12 | 38 | 393 | 3 | 388 | 2.98e-36 | 143 |
MS.gene37187.t1 | MTR_1g101985 | 51.087 | 92 | 44 | 1 | 96 | 187 | 72 | 162 | 4.67e-23 | 96.7 |
MS.gene37187.t1 | MTR_1g052225 | 38.554 | 166 | 51 | 5 | 110 | 275 | 18 | 132 | 1.45e-21 | 90.9 |
MS.gene37187.t1 | MTR_4g008200 | 23.478 | 345 | 214 | 13 | 110 | 444 | 32 | 336 | 8.02e-19 | 88.6 |
MS.gene37187.t1 | MTR_4g008200 | 23.478 | 345 | 214 | 13 | 110 | 444 | 83 | 387 | 1.55e-18 | 88.2 |
MS.gene37187.t1 | MTR_6g046230 | 42.478 | 113 | 48 | 2 | 161 | 261 | 34 | 141 | 1.68e-17 | 79.7 |
MS.gene37187.t1 | MTR_2g038320 | 23.099 | 355 | 209 | 10 | 106 | 443 | 85 | 392 | 1.66e-15 | 79.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37187.t1 | AT5G15740 | 71.976 | 496 | 136 | 2 | 16 | 510 | 10 | 503 | 0.0 | 762 |
MS.gene37187.t1 | AT3G02250 | 71.371 | 496 | 139 | 2 | 16 | 510 | 10 | 503 | 0.0 | 748 |
MS.gene37187.t1 | AT1G14020 | 60.814 | 467 | 176 | 2 | 39 | 505 | 23 | 482 | 0.0 | 617 |
MS.gene37187.t1 | AT2G03280 | 58.155 | 466 | 181 | 4 | 41 | 505 | 28 | 480 | 0.0 | 579 |
MS.gene37187.t1 | AT2G03280 | 54.970 | 493 | 181 | 5 | 41 | 505 | 28 | 507 | 0.0 | 565 |
MS.gene37187.t1 | AT2G37980 | 50.630 | 397 | 186 | 6 | 112 | 505 | 225 | 614 | 2.30e-131 | 395 |
MS.gene37187.t1 | AT5G35570 | 49.231 | 390 | 189 | 5 | 114 | 501 | 252 | 634 | 4.79e-128 | 387 |
MS.gene37187.t1 | AT3G54100 | 48.737 | 396 | 195 | 5 | 112 | 505 | 221 | 610 | 1.53e-126 | 383 |
MS.gene37187.t1 | AT1G22460 | 46.683 | 407 | 203 | 5 | 112 | 509 | 159 | 560 | 2.26e-125 | 378 |
MS.gene37187.t1 | AT5G64600 | 47.215 | 413 | 192 | 7 | 108 | 505 | 112 | 513 | 1.99e-124 | 374 |
MS.gene37187.t1 | AT5G01100 | 49.118 | 397 | 190 | 5 | 110 | 501 | 213 | 602 | 2.40e-124 | 377 |
MS.gene37187.t1 | AT4G38390 | 43.182 | 396 | 210 | 8 | 112 | 505 | 122 | 504 | 2.28e-100 | 313 |
MS.gene37187.t1 | AT1G76270 | 43.309 | 411 | 215 | 10 | 97 | 505 | 91 | 485 | 7.28e-99 | 310 |
MS.gene37187.t1 | AT1G20550 | 40.988 | 405 | 212 | 9 | 108 | 505 | 104 | 488 | 3.62e-95 | 300 |
MS.gene37187.t1 | AT4G16650 | 42.432 | 403 | 216 | 9 | 105 | 505 | 114 | 502 | 3.87e-89 | 284 |
MS.gene37187.t1 | AT4G16650 | 42.432 | 403 | 216 | 9 | 105 | 505 | 114 | 502 | 3.87e-89 | 284 |
MS.gene37187.t1 | AT4G24530 | 36.597 | 429 | 224 | 10 | 112 | 505 | 100 | 515 | 1.52e-85 | 273 |
MS.gene37187.t1 | AT1G38065 | 37.273 | 440 | 246 | 12 | 84 | 505 | 12 | 439 | 9.26e-85 | 270 |
MS.gene37187.t1 | AT1G38065 | 38.200 | 411 | 229 | 11 | 113 | 505 | 26 | 429 | 2.13e-84 | 269 |
MS.gene37187.t1 | AT3G26370 | 36.881 | 404 | 231 | 7 | 95 | 482 | 142 | 537 | 5.56e-84 | 270 |
MS.gene37187.t1 | AT1G04910 | 42.450 | 351 | 194 | 6 | 106 | 453 | 83 | 428 | 2.75e-83 | 268 |
MS.gene37187.t1 | AT1G38131 | 38.200 | 411 | 229 | 11 | 113 | 505 | 155 | 558 | 7.07e-83 | 268 |
MS.gene37187.t1 | AT5G65470 | 35.731 | 431 | 227 | 10 | 112 | 505 | 84 | 501 | 1.13e-82 | 265 |
MS.gene37187.t1 | AT5G63390 | 38.770 | 374 | 214 | 6 | 116 | 484 | 167 | 530 | 2.27e-79 | 258 |
MS.gene37187.t1 | AT1G35510 | 40.108 | 369 | 200 | 7 | 113 | 466 | 159 | 521 | 2.61e-78 | 256 |
MS.gene37187.t1 | AT2G01480 | 36.104 | 385 | 223 | 8 | 112 | 479 | 153 | 531 | 5.07e-78 | 255 |
MS.gene37187.t1 | AT1G14970 | 36.719 | 384 | 220 | 8 | 113 | 479 | 9 | 386 | 1.11e-77 | 250 |
MS.gene37187.t1 | AT1G14970 | 36.719 | 384 | 220 | 8 | 113 | 479 | 35 | 412 | 2.01e-77 | 250 |
MS.gene37187.t1 | AT2G01480 | 37.151 | 358 | 207 | 6 | 112 | 454 | 153 | 507 | 6.54e-77 | 251 |
MS.gene37187.t1 | AT1G14970 | 36.719 | 384 | 220 | 8 | 113 | 479 | 155 | 532 | 6.27e-76 | 249 |
MS.gene37187.t1 | AT1G11990 | 38.338 | 373 | 215 | 8 | 114 | 473 | 191 | 561 | 3.66e-74 | 246 |
MS.gene37187.t1 | AT1G62330 | 35.714 | 406 | 210 | 9 | 114 | 473 | 222 | 622 | 4.87e-74 | 247 |
MS.gene37187.t1 | AT1G29200 | 37.688 | 398 | 208 | 8 | 113 | 472 | 70 | 465 | 3.11e-73 | 241 |
MS.gene37187.t1 | AT1G29200 | 37.688 | 398 | 208 | 8 | 113 | 472 | 70 | 465 | 3.11e-73 | 241 |
MS.gene37187.t1 | AT1G29200 | 37.805 | 410 | 214 | 9 | 101 | 472 | 175 | 581 | 5.14e-72 | 240 |
MS.gene37187.t1 | AT1G29200 | 37.405 | 393 | 206 | 8 | 118 | 472 | 1 | 391 | 9.41e-71 | 232 |
MS.gene37187.t1 | AT2G44500 | 36.364 | 374 | 225 | 5 | 116 | 485 | 180 | 544 | 3.94e-69 | 232 |
MS.gene37187.t1 | AT1G11990 | 34.878 | 410 | 215 | 8 | 114 | 473 | 176 | 583 | 8.45e-69 | 232 |
MS.gene37187.t1 | AT3G07900 | 35.200 | 375 | 228 | 7 | 116 | 485 | 191 | 555 | 5.16e-68 | 229 |
MS.gene37187.t1 | AT1G52630 | 34.211 | 342 | 210 | 7 | 112 | 452 | 73 | 400 | 1.76e-57 | 197 |
MS.gene37187.t1 | AT1G52630 | 32.515 | 326 | 205 | 7 | 128 | 452 | 1 | 312 | 4.43e-49 | 172 |
MS.gene37187.t1 | AT3G03810 | 35.410 | 305 | 173 | 7 | 107 | 393 | 83 | 381 | 1.49e-48 | 178 |
MS.gene37187.t1 | AT3G03810 | 35.410 | 305 | 173 | 7 | 107 | 393 | 83 | 381 | 1.49e-48 | 178 |
MS.gene37187.t1 | AT3G26370 | 38.208 | 212 | 118 | 4 | 95 | 297 | 142 | 349 | 5.44e-42 | 155 |
MS.gene37187.t1 | AT3G30300 | 32.013 | 303 | 173 | 9 | 106 | 387 | 96 | 386 | 1.11e-38 | 150 |
MS.gene37187.t1 | AT3G30300 | 32.013 | 303 | 173 | 9 | 106 | 387 | 96 | 386 | 1.11e-38 | 150 |
MS.gene37187.t1 | AT2G44500 | 36.638 | 232 | 137 | 4 | 116 | 343 | 180 | 405 | 1.96e-34 | 134 |
Find 107 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGAGATTTCTTCACCTTAA+TGG | 0.201192 | 6.2:-10935392 | None:intergenic |
GTCGAGCATCGGTCTTATTT+AGG | 0.246601 | 6.2:-10934012 | None:intergenic |
CCATTTGTGAAGAGTGGTTT+TGG | 0.248317 | 6.2:-10934694 | None:intergenic |
CTATTACTACTGTGATTCTT+TGG | 0.257217 | 6.2:+10932534 | MS.gene37187:CDS |
ATTGCTGCTGGAGAAATATT+TGG | 0.270817 | 6.2:+10934489 | MS.gene37187:CDS |
TAAGAATAATGGTTATCTTA+TGG | 0.276020 | 6.2:+10933343 | MS.gene37187:CDS |
AGCTTGATAAATCGTCATTC+TGG | 0.276618 | 6.2:+10933568 | MS.gene37187:CDS |
TGATTGCAATCGGAGAGTTT+TGG | 0.282115 | 6.2:+10932573 | MS.gene37187:CDS |
AGATGAAGTTAGAATATTAA+AGG | 0.285974 | 6.2:+10933770 | MS.gene37187:CDS |
GCCTTCTCTGGCTGCACTCA+TGG | 0.306503 | 6.2:+10934205 | MS.gene37187:CDS |
TCAGGGATTTATAAGAATAA+TGG | 0.316108 | 6.2:+10933332 | MS.gene37187:intron |
CTCAAGAGAAGAGTTGAATT+AGG | 0.338975 | 6.2:+10933807 | MS.gene37187:CDS |
TTTCAAAAGAACTATACTAT+TGG | 0.342797 | 6.2:+10935303 | MS.gene37187:CDS |
AAGTGATCATTGTGAGGAAA+TGG | 0.357790 | 6.2:+10932421 | MS.gene37187:CDS |
GAGGGAAAGAGGACCTTTCC+TGG | 0.367903 | 6.2:+10934150 | MS.gene37187:CDS |
ATGGATATGTTGGCCTTCTC+TGG | 0.368715 | 6.2:+10934193 | MS.gene37187:CDS |
CTCTTCACAAATGGCTGCAT+TGG | 0.374268 | 6.2:+10934703 | MS.gene37187:CDS |
GAAATATCCGACCAACTAAT+CGG | 0.379890 | 6.2:-10933849 | None:intergenic |
ATTCAAATTTATATTGCTGC+TGG | 0.386692 | 6.2:+10934477 | MS.gene37187:CDS |
TTCTTTCTACCGACCAAGTT+AGG | 0.387922 | 6.2:-10934549 | None:intergenic |
ACCGTCTTTCCTCTTAAGTT+CGG | 0.391839 | 6.2:-10934391 | None:intergenic |
TCTTGGTGACTGAAACAATA+AGG | 0.397969 | 6.2:-10932620 | None:intergenic |
TATCTTATGGTTTCTTGCAA+TGG | 0.398386 | 6.2:+10933356 | MS.gene37187:CDS |
TTCTTAGATATGCTTATCCT+TGG | 0.399940 | 6.2:+10934346 | MS.gene37187:intron |
GGCATACCCTTCAACAACTT+TGG | 0.401643 | 6.2:-10932599 | None:intergenic |
CCAAAACCACTCTTCACAAA+TGG | 0.425076 | 6.2:+10934694 | MS.gene37187:CDS |
ATATTTGTTCCAACATATGA+TGG | 0.428867 | 6.2:+10934752 | MS.gene37187:CDS |
TGTAGCGAAGGCTAGCGTTT+CGG | 0.441302 | 6.2:+10932661 | MS.gene37187:CDS |
TGCTCTAATATTGAAAGCAC+TGG | 0.443798 | 6.2:+10934440 | MS.gene37187:CDS |
TATGAATAAGTCATTAAGTT+GGG | 0.450748 | 6.2:+10935360 | MS.gene37187:CDS |
TTAGATATGCTTATCCTTGG+TGG | 0.452084 | 6.2:+10934349 | MS.gene37187:intron |
TTCACTTTCTGCAGATTCCT+AGG | 0.452684 | 6.2:+10935280 | MS.gene37187:intron |
GAAGGCTAGCGTTTCGGCTA+AGG | 0.452704 | 6.2:+10932667 | MS.gene37187:CDS |
AAATATCCGACCAACTAATC+GGG | 0.453315 | 6.2:-10933848 | None:intergenic |
GTTGTTCAGTTGATTGCAAT+CGG | 0.456722 | 6.2:+10932563 | MS.gene37187:CDS |
CGCAGATTCTTCCTCTCATA+CGG | 0.465185 | 6.2:+10933972 | MS.gene37187:intron |
TCATAAATTCCGAACTTAAG+AGG | 0.466422 | 6.2:+10934382 | MS.gene37187:CDS |
GCGAGCTACTTATCCTAACT+TGG | 0.472434 | 6.2:+10934536 | MS.gene37187:CDS |
ACTATTGGATAGAAAGCATC+TGG | 0.472946 | 6.2:+10935318 | MS.gene37187:CDS |
TTGGGGTCCAAAGTTGTTGA+AGG | 0.477681 | 6.2:+10932592 | MS.gene37187:CDS |
TATCTACATCAAATATGTCT+TGG | 0.480238 | 6.2:-10933728 | None:intergenic |
TAGATATGAGATGGATATGT+TGG | 0.483181 | 6.2:+10934183 | MS.gene37187:CDS |
GCTTGATAAATCGTCATTCT+GGG | 0.485095 | 6.2:+10933569 | MS.gene37187:CDS |
AATATTAGAGCAGTTTCCTC+AGG | 0.485547 | 6.2:-10934429 | None:intergenic |
ATATGAATAAGTCATTAAGT+TGG | 0.488874 | 6.2:+10935359 | MS.gene37187:CDS |
CTTATGGTTTCTTGCAATGG+AGG | 0.488912 | 6.2:+10933359 | MS.gene37187:CDS |
ATGTGATAGCAGCGAGGTTG+AGG | 0.489083 | 6.2:+10934228 | MS.gene37187:CDS |
TGGAAATACATCAAATCTGA+AGG | 0.489779 | 6.2:-10934674 | None:intergenic |
GCAGTTTCCTCAGGTGTTAA+CGG | 0.492035 | 6.2:-10934420 | None:intergenic |
CATATCTAAGATGAAGTACC+AGG | 0.495742 | 6.2:-10934168 | None:intergenic |
GCCATGTTTCCATCATATGT+TGG | 0.500626 | 6.2:-10934761 | None:intergenic |
GAAATCTCATGCCAAGAGGA+TGG | 0.502076 | 6.2:+10935405 | MS.gene37187:CDS |
ATGAAGTTGTGAAATCTAAG+AGG | 0.503101 | 6.2:+10932471 | MS.gene37187:CDS |
CCACAGCTGAAGATGCATCT+TGG | 0.508649 | 6.2:-10932637 | None:intergenic |
GGTAAGGAAGGAAACTCTGC+TGG | 0.511062 | 6.2:+10934649 | MS.gene37187:intron |
GCCATCCACACTTTGATCCT+CGG | 0.511148 | 6.2:-10932506 | None:intergenic |
TTATCCTTGGTGGAAGGAAA+AGG | 0.516235 | 6.2:+10934359 | MS.gene37187:CDS |
CTCTATAGTTCATCTTGAAG+TGG | 0.523600 | 6.2:-10935508 | None:intergenic |
TATTCATATATAGATCTATG+AGG | 0.530192 | 6.2:-10935345 | None:intergenic |
TCAACTCTTCTCTTGAGCCT+AGG | 0.531532 | 6.2:-10933801 | None:intergenic |
TCCGAACTTAAGAGGAAAGA+CGG | 0.533451 | 6.2:+10934390 | MS.gene37187:CDS |
ATTCATATATAGATCTATGA+GGG | 0.537959 | 6.2:-10935344 | None:intergenic |
CGTCATTCTGGGCCGATCCA+AGG | 0.538229 | 6.2:+10933580 | MS.gene37187:CDS |
TTCAGCTGTGGTTGTAGCGA+AGG | 0.547529 | 6.2:+10932649 | MS.gene37187:CDS |
AACATGGCTAAAGTTGTTGA+AGG | 0.548148 | 6.2:+10934776 | MS.gene37187:CDS |
AATGACGATTTATCAAGCTC+TGG | 0.553192 | 6.2:-10933564 | None:intergenic |
ATGCAGCCATTTGTGAAGAG+TGG | 0.560529 | 6.2:-10934700 | None:intergenic |
CATTGTGAGGAAATGGAGAT+GGG | 0.560789 | 6.2:+10932428 | MS.gene37187:CDS |
TGGCAAGCATTCATGAGGGT+TGG | 0.561491 | 6.2:-10935488 | None:intergenic |
CAATAAAACAATACCTTCTG+TGG | 0.571447 | 6.2:-10934799 | None:intergenic |
AAATCTCATGCCAAGAGGAT+GGG | 0.571821 | 6.2:+10935406 | MS.gene37187:CDS |
AGGTTATCAAAAGTATCTGA+TGG | 0.572072 | 6.2:+10932395 | MS.gene37187:CDS |
TGGGGTCCAAAGTTGTTGAA+GGG | 0.572393 | 6.2:+10932593 | MS.gene37187:CDS |
ACTTCATCTTAGATATGAGA+TGG | 0.574403 | 6.2:+10934174 | MS.gene37187:CDS |
CTAAGATGAAGTACCAGGAA+AGG | 0.576609 | 6.2:-10934163 | None:intergenic |
GCCGAGGATCAAAGTGTGGA+TGG | 0.578147 | 6.2:+10932505 | MS.gene37187:CDS |
ACTCTTCTCTTGAGCCTAGG+TGG | 0.580749 | 6.2:-10933798 | None:intergenic |
ATATGCTTATCCTTGGTGGA+AGG | 0.581937 | 6.2:+10934353 | MS.gene37187:CDS |
TCATTGTGAGGAAATGGAGA+TGG | 0.586151 | 6.2:+10932427 | MS.gene37187:CDS |
ATTTGGTGGAAAGAGAAGAA+TGG | 0.586855 | 6.2:+10934506 | MS.gene37187:CDS |
TGAAGTGGCAAGCATTCATG+AGG | 0.593182 | 6.2:-10935493 | None:intergenic |
ACCTTGTGTTTCCGTATGAG+AGG | 0.596897 | 6.2:-10933983 | None:intergenic |
AGAGGTTTGTTGTAAAGCCG+AGG | 0.599346 | 6.2:+10932489 | MS.gene37187:CDS |
TCAACGCATTAAAATTTACT+CGG | 0.602768 | 6.2:-10934078 | None:intergenic |
ATTGTTAGCAAGTCGAGCAT+CGG | 0.606467 | 6.2:-10934023 | None:intergenic |
TTGAGGAACTCACACGAATG+AGG | 0.617787 | 6.2:+10934245 | MS.gene37187:CDS |
CCAAGATGCATCTTCAGCTG+TGG | 0.622819 | 6.2:+10932637 | MS.gene37187:CDS |
ACTTCTCAGATAGAACAACT+AGG | 0.625398 | 6.2:+10934106 | MS.gene37187:CDS |
GCTGCTGGAGAAATATTTGG+TGG | 0.627092 | 6.2:+10934492 | MS.gene37187:CDS |
ACAATGTGCAAACCTTGGAT+CGG | 0.628923 | 6.2:-10933592 | None:intergenic |
AAGTTGTTGAAGGCCACAGA+AGG | 0.635026 | 6.2:+10934786 | MS.gene37187:CDS |
TCCAACATATGATGGAAACA+TGG | 0.636574 | 6.2:+10934760 | MS.gene37187:CDS |
TCCATGAGTGCAGCCAGAGA+AGG | 0.637197 | 6.2:-10934206 | None:intergenic |
TCTACTACCACAGGTAAGGA+AGG | 0.638240 | 6.2:+10934637 | MS.gene37187:intron |
AATATCCGACCAACTAATCG+GGG | 0.639424 | 6.2:-10933847 | None:intergenic |
GATGCTCGACTTGCTAACAA+TGG | 0.647559 | 6.2:+10934025 | MS.gene37187:CDS |
AACTAGGTAGAAAGATAGTG+AGG | 0.649462 | 6.2:+10934122 | MS.gene37187:CDS |
TATTCTGCAGATATGCGACA+TGG | 0.654426 | 6.2:+10933503 | MS.gene37187:intron |
TAAAGCCGAGGATCAAAGTG+TGG | 0.669923 | 6.2:+10932501 | MS.gene37187:CDS |
TCCTCTCATACGGAAACACA+AGG | 0.673092 | 6.2:+10933982 | MS.gene37187:CDS |
TTCATATATAGATCTATGAG+GGG | 0.674827 | 6.2:-10935343 | None:intergenic |
TTTATGTCCGTTAACACCTG+AGG | 0.675937 | 6.2:+10934413 | MS.gene37187:CDS |
TATTAAAGGAACTACCACCT+AGG | 0.678913 | 6.2:+10933784 | MS.gene37187:CDS |
TGAAGAAATCTCATGCCAAG+AGG | 0.682299 | 6.2:+10935401 | MS.gene37187:CDS |
GAAGTGGCAAGCATTCATGA+GGG | 0.699548 | 6.2:-10935492 | None:intergenic |
ATATCCGACCAACTAATCGG+GGG | 0.718638 | 6.2:-10933846 | None:intergenic |
TCATGGATGTGATAGCAGCG+AGG | 0.773321 | 6.2:+10934222 | MS.gene37187:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCATATAAATTTAATGATTG+CGG | - | chr6.2:10933441-10933460 | None:intergenic | 15.0% |
!! | AGAACTTTAAATCATAAACA+CGG | + | chr6.2:10932766-10932785 | MS.gene37187:intron | 20.0% |
!! | AGATGAAGTTAGAATATTAA+AGG | + | chr6.2:10933770-10933789 | MS.gene37187:CDS | 20.0% |
!! | ATATGAATAAGTCATTAAGT+TGG | + | chr6.2:10935359-10935378 | MS.gene37187:CDS | 20.0% |
!! | ATTCATATATAGATCTATGA+GGG | - | chr6.2:10935347-10935366 | None:intergenic | 20.0% |
!! | TAAGAATAATGGTTATCTTA+TGG | + | chr6.2:10933343-10933362 | MS.gene37187:CDS | 20.0% |
!! | TATGAATAAGTCATTAAGTT+GGG | + | chr6.2:10935360-10935379 | MS.gene37187:CDS | 20.0% |
!! | TATTCATATATAGATCTATG+AGG | - | chr6.2:10935348-10935367 | None:intergenic | 20.0% |
!! | TGATAAGAATAAGAATCTTA+TGG | + | chr6.2:10933280-10933299 | MS.gene37187:intron | 20.0% |
!! | TTTCAAAAGAACTATACTAT+TGG | + | chr6.2:10935303-10935322 | MS.gene37187:CDS | 20.0% |
!!! | ATTCTGTTTTTCTCAAAATT+TGG | + | chr6.2:10933475-10933494 | MS.gene37187:intron | 20.0% |
!!! | ATTTGATAATTCTTTTCATC+AGG | + | chr6.2:10933314-10933333 | MS.gene37187:intron | 20.0% |
!!! | CACTTTTGTTAGTAATTTTA+TGG | + | chr6.2:10935008-10935027 | MS.gene37187:intron | 20.0% |
!!! | TAAAAATAGTCTTCTTCTTT+TGG | - | chr6.2:10935466-10935485 | None:intergenic | 20.0% |
!!! | TTGTAATTTTGATACATTCA+AGG | + | chr6.2:10935133-10935152 | MS.gene37187:intron | 20.0% |
!!! | TTTGATAATTCTTTTCATCA+GGG | + | chr6.2:10933315-10933334 | MS.gene37187:intron | 20.0% |
! | AACATCAAAGTAACAAAAAG+AGG | - | chr6.2:10933698-10933717 | None:intergenic | 25.0% |
! | ATATTTGTTCCAACATATGA+TGG | + | chr6.2:10934752-10934771 | MS.gene37187:CDS | 25.0% |
! | ATTACTCTGGTATTAAAATG+AGG | + | chr6.2:10934899-10934918 | MS.gene37187:intron | 25.0% |
! | ATTCAAATTTATATTGCTGC+TGG | + | chr6.2:10934477-10934496 | MS.gene37187:CDS | 25.0% |
! | GAGATTTCAATTAAGAAATC+AGG | - | chr6.2:10933676-10933695 | None:intergenic | 25.0% |
! | GTACTCTATTAAAATCTTCA+AGG | + | chr6.2:10935201-10935220 | MS.gene37187:intron | 25.0% |
! | TAGATTGTGCCTTTATATTA+TGG | + | chr6.2:10933010-10933029 | MS.gene37187:intron | 25.0% |
! | TATCTACATCAAATATGTCT+TGG | - | chr6.2:10933731-10933750 | None:intergenic | 25.0% |
! | TCAACGCATTAAAATTTACT+CGG | - | chr6.2:10934081-10934100 | None:intergenic | 25.0% |
! | TCAGGGATTTATAAGAATAA+TGG | + | chr6.2:10933332-10933351 | MS.gene37187:intron | 25.0% |
! | TTCATATATAGATCTATGAG+GGG | - | chr6.2:10935346-10935365 | None:intergenic | 25.0% |
!! | TATAAAGGCACAATCTAATT+AGG | - | chr6.2:10933007-10933026 | None:intergenic | 25.0% |
!! | TCTAAGATCAAACTAACTAA+CGG | + | chr6.2:10935057-10935076 | MS.gene37187:intron | 25.0% |
!! | TGTCATTTCAATACATTTGA+CGG | - | chr6.2:10934971-10934990 | None:intergenic | 25.0% |
!!! | ACAACCAAAAACTTACTTTT+TGG | - | chr6.2:10932704-10932723 | None:intergenic | 25.0% |
!!! | TGTTTGTAACCTTTTTTTTC+CGG | + | chr6.2:10934613-10934632 | MS.gene37187:intron | 25.0% |
AAATTTAATGATTGCGGCAA+AGG | - | chr6.2:10933435-10933454 | None:intergenic | 30.0% | |
AATAGAGTACATAGTCACTT+CGG | - | chr6.2:10935191-10935210 | None:intergenic | 30.0% | |
ACTTCATCTTAGATATGAGA+TGG | + | chr6.2:10934174-10934193 | MS.gene37187:CDS | 30.0% | |
ATCAGGAAGATAATCGTAAA+TGG | - | chr6.2:10933659-10933678 | None:intergenic | 30.0% | |
ATGAAGTTGTGAAATCTAAG+AGG | + | chr6.2:10932471-10932490 | MS.gene37187:CDS | 30.0% | |
ATGAGATTTCTTCACCTTAA+TGG | - | chr6.2:10935395-10935414 | None:intergenic | 30.0% | |
CAATAAAACAATACCTTCTG+TGG | - | chr6.2:10934802-10934821 | None:intergenic | 30.0% | |
CAGTAGATTGTTGTCAAATA+GGG | + | chr6.2:10933061-10933080 | MS.gene37187:intron | 30.0% | |
CTATTACTACTGTGATTCTT+TGG | + | chr6.2:10932534-10932553 | MS.gene37187:CDS | 30.0% | |
TAGATATGAGATGGATATGT+TGG | + | chr6.2:10934183-10934202 | MS.gene37187:CDS | 30.0% | |
TATCTTATGGTTTCTTGCAA+TGG | + | chr6.2:10933356-10933375 | MS.gene37187:CDS | 30.0% | |
TATTTCGTACTACGAAAAAC+AGG | + | chr6.2:10933866-10933885 | MS.gene37187:CDS | 30.0% | |
TCATAAATTCCGAACTTAAG+AGG | + | chr6.2:10934382-10934401 | MS.gene37187:CDS | 30.0% | |
TCTGAATAGTACATCATCAA+AGG | - | chr6.2:10934865-10934884 | None:intergenic | 30.0% | |
TGGAAATACATCAAATCTGA+AGG | - | chr6.2:10934677-10934696 | None:intergenic | 30.0% | |
TTCTTAGATATGCTTATCCT+TGG | + | chr6.2:10934346-10934365 | MS.gene37187:intron | 30.0% | |
TTGTGCCTTTATATTATGGT+TGG | + | chr6.2:10933014-10933033 | MS.gene37187:intron | 30.0% | |
! | AAAGATAGTGAGGATTTTGA+GGG | + | chr6.2:10934132-10934151 | MS.gene37187:CDS | 30.0% |
! | AAATGAGGAAATCGTCATTT+TGG | + | chr6.2:10934914-10934933 | MS.gene37187:intron | 30.0% |
! | AAGACTTTTCTGCAATATCA+TGG | - | chr6.2:10932969-10932988 | None:intergenic | 30.0% |
! | CTTCTTCTTTTGGTCTATTT+GGG | - | chr6.2:10935456-10935475 | None:intergenic | 30.0% |
! | CTTTATATTATGGTTGGTGT+CGG | + | chr6.2:10933020-10933039 | MS.gene37187:intron | 30.0% |
! | GGATGATAACTCTTCTTTTT+GGG | - | chr6.2:10935435-10935454 | None:intergenic | 30.0% |
! | TCTTCTTCTTTTGGTCTATT+TGG | - | chr6.2:10935457-10935476 | None:intergenic | 30.0% |
! | TTGGGATGAATTTTCCATTA+AGG | + | chr6.2:10935378-10935397 | MS.gene37187:CDS | 30.0% |
!! | AGGTTATCAAAAGTATCTGA+TGG | + | chr6.2:10932395-10932414 | MS.gene37187:CDS | 30.0% |
!! | GAGTAAATTTTAATGCGTTG+AGG | + | chr6.2:10934080-10934099 | MS.gene37187:CDS | 30.0% |
!!! | ACCAAAAACTTACTTTTTGG+CGG | - | chr6.2:10932701-10932720 | None:intergenic | 30.0% |
!!! | GTATAGTTCTTTTGAAACCT+AGG | - | chr6.2:10935300-10935319 | None:intergenic | 30.0% |
AAATATCCGACCAACTAATC+GGG | - | chr6.2:10933851-10933870 | None:intergenic | 35.0% | |
AACAATCTACTGCACTATCA+TGG | - | chr6.2:10933053-10933072 | None:intergenic | 35.0% | |
AACATGGCTAAAGTTGTTGA+AGG | + | chr6.2:10934776-10934795 | MS.gene37187:CDS | 35.0% | |
AACTAGGTAGAAAGATAGTG+AGG | + | chr6.2:10934122-10934141 | MS.gene37187:CDS | 35.0% | |
AAGTGATCATTGTGAGGAAA+TGG | + | chr6.2:10932421-10932440 | MS.gene37187:CDS | 35.0% | |
AATATTAGAGCAGTTTCCTC+AGG | - | chr6.2:10934432-10934451 | None:intergenic | 35.0% | |
AATGACGATTTATCAAGCTC+TGG | - | chr6.2:10933567-10933586 | None:intergenic | 35.0% | |
ACTTCTCAGATAGAACAACT+AGG | + | chr6.2:10934106-10934125 | MS.gene37187:CDS | 35.0% | |
AGCTTGATAAATCGTCATTC+TGG | + | chr6.2:10933568-10933587 | MS.gene37187:CDS | 35.0% | |
ATTGCTGCTGGAGAAATATT+TGG | + | chr6.2:10934489-10934508 | MS.gene37187:CDS | 35.0% | |
CAAAGGAAATACACATTCGT+AGG | + | chr6.2:10935106-10935125 | MS.gene37187:intron | 35.0% | |
CAATAACAATGTGCAAACCT+TGG | - | chr6.2:10933600-10933619 | None:intergenic | 35.0% | |
CGACACCAACCATAATATAA+AGG | - | chr6.2:10933022-10933041 | None:intergenic | 35.0% | |
CTCAAGAGAAGAGTTGAATT+AGG | + | chr6.2:10933807-10933826 | MS.gene37187:CDS | 35.0% | |
CTTACATAGCAATCACATTG+TGG | + | chr6.2:10933084-10933103 | MS.gene37187:intron | 35.0% | |
GAAATATCCGACCAACTAAT+CGG | - | chr6.2:10933852-10933871 | None:intergenic | 35.0% | |
GATAATGTCGCTGTCAAATA+GGG | + | chr6.2:10933126-10933145 | MS.gene37187:intron | 35.0% | |
GCAGTAGATTGTTGTCAAAT+AGG | + | chr6.2:10933060-10933079 | MS.gene37187:intron | 35.0% | |
GCTTGATAAATCGTCATTCT+GGG | + | chr6.2:10933569-10933588 | MS.gene37187:CDS | 35.0% | |
GGTAACTAATGCTAAGTACT+TGG | - | chr6.2:10933414-10933433 | None:intergenic | 35.0% | |
GTAGTAGAACCGGAAAAAAA+AGG | - | chr6.2:10934625-10934644 | None:intergenic | 35.0% | |
GTTGTTCAGTTGATTGCAAT+CGG | + | chr6.2:10932563-10932582 | MS.gene37187:CDS | 35.0% | |
TATTAAAGGAACTACCACCT+AGG | + | chr6.2:10933784-10933803 | MS.gene37187:CDS | 35.0% | |
TGCATGATACATCATTACTC+TGG | + | chr6.2:10934886-10934905 | MS.gene37187:intron | 35.0% | |
TGGAAAAAGTGATCATTGTG+AGG | + | chr6.2:10932415-10932434 | MS.gene37187:CDS | 35.0% | |
TTAGATATGCTTATCCTTGG+TGG | + | chr6.2:10934349-10934368 | MS.gene37187:intron | 35.0% | |
TTCTATGTCATCTTCTCTGT+AGG | + | chr6.2:10934834-10934853 | MS.gene37187:intron | 35.0% | |
! | ATTTGGTGGAAAGAGAAGAA+TGG | + | chr6.2:10934506-10934525 | MS.gene37187:CDS | 35.0% |
! | CATATCTAAGATGAAGTACC+AGG | - | chr6.2:10934171-10934190 | None:intergenic | 35.0% |
! | GAAAGATAGTGAGGATTTTG+AGG | + | chr6.2:10934131-10934150 | MS.gene37187:CDS | 35.0% |
! | GGGATGATAACTCTTCTTTT+TGG | - | chr6.2:10935436-10935455 | None:intergenic | 35.0% |
! | GTGTATTTCCTTTGAGAGTT+TGG | - | chr6.2:10935100-10935119 | None:intergenic | 35.0% |
! | TCCAACATATGATGGAAACA+TGG | + | chr6.2:10934760-10934779 | MS.gene37187:CDS | 35.0% |
! | TCCGCCAAAAAGTAAGTTTT+TGG | + | chr6.2:10932697-10932716 | MS.gene37187:intron | 35.0% |
! | TCTTGGTGACTGAAACAATA+AGG | - | chr6.2:10932623-10932642 | None:intergenic | 35.0% |
! | TGCAATATCATGGATTGCAA+CGG | - | chr6.2:10932959-10932978 | None:intergenic | 35.0% |
! | TGCTCTAATATTGAAAGCAC+TGG | + | chr6.2:10934440-10934459 | MS.gene37187:CDS | 35.0% |
!! | ACTATTGGATAGAAAGCATC+TGG | + | chr6.2:10935318-10935337 | MS.gene37187:CDS | 35.0% |
!! | ATGGGATTCAATGTTTTGAG+TGG | + | chr6.2:10932446-10932465 | MS.gene37187:CDS | 35.0% |
AAATCTCATGCCAAGAGGAT+GGG | + | chr6.2:10935406-10935425 | MS.gene37187:CDS | 40.0% | |
AATATCCGACCAACTAATCG+GGG | - | chr6.2:10933850-10933869 | None:intergenic | 40.0% | |
ACAATGTGCAAACCTTGGAT+CGG | - | chr6.2:10933595-10933614 | None:intergenic | 40.0% | |
ACCGTCTTTCCTCTTAAGTT+CGG | - | chr6.2:10934394-10934413 | None:intergenic | 40.0% | |
ACTAACAAAAGTGACACGCA+TGG | - | chr6.2:10935001-10935020 | None:intergenic | 40.0% | |
ATATGCTTATCCTTGGTGGA+AGG | + | chr6.2:10934353-10934372 | MS.gene37187:CDS | 40.0% | |
ATGCATGAGCCCTTATATTG+TGG | + | chr6.2:10932926-10932945 | MS.gene37187:intron | 40.0% | |
ATTGTTAGCAAGTCGAGCAT+CGG | - | chr6.2:10934026-10934045 | None:intergenic | 40.0% | |
CATTGTGAGGAAATGGAGAT+GGG | + | chr6.2:10932428-10932447 | MS.gene37187:CDS | 40.0% | |
CCAAAACCACTCTTCACAAA+TGG | + | chr6.2:10934694-10934713 | MS.gene37187:CDS | 40.0% | |
CGATAATGTCGCTGTCAAAT+AGG | + | chr6.2:10933125-10933144 | MS.gene37187:intron | 40.0% | |
CTTATGGTTTCTTGCAATGG+AGG | + | chr6.2:10933359-10933378 | MS.gene37187:CDS | 40.0% | |
GCCATGTTTCCATCATATGT+TGG | - | chr6.2:10934764-10934783 | None:intergenic | 40.0% | |
GCTACTTATCCTAACTTGGT+CGG | + | chr6.2:10934540-10934559 | MS.gene37187:intron | 40.0% | |
GGACTGTGACCACAATATAA+GGG | - | chr6.2:10932938-10932957 | None:intergenic | 40.0% | |
TATTCTGCAGATATGCGACA+TGG | + | chr6.2:10933503-10933522 | MS.gene37187:intron | 40.0% | |
TCATTGTGAGGAAATGGAGA+TGG | + | chr6.2:10932427-10932446 | MS.gene37187:CDS | 40.0% | |
TCCGAACTTAAGAGGAAAGA+CGG | + | chr6.2:10934390-10934409 | MS.gene37187:CDS | 40.0% | |
TCGAAGAACCAAACTCTCAA+AGG | + | chr6.2:10935089-10935108 | MS.gene37187:intron | 40.0% | |
TGAAGAAATCTCATGCCAAG+AGG | + | chr6.2:10935401-10935420 | MS.gene37187:CDS | 40.0% | |
TTATCCTTGGTGGAAGGAAA+AGG | + | chr6.2:10934359-10934378 | MS.gene37187:CDS | 40.0% | |
TTCACTTTCTGCAGATTCCT+AGG | + | chr6.2:10935280-10935299 | MS.gene37187:intron | 40.0% | |
TTCTTTCTACCGACCAAGTT+AGG | - | chr6.2:10934552-10934571 | None:intergenic | 40.0% | |
TTTATGTCCGTTAACACCTG+AGG | + | chr6.2:10934413-10934432 | MS.gene37187:CDS | 40.0% | |
! | ATTGCAATCGGAGAGTTTTG+GGG | + | chr6.2:10932575-10932594 | MS.gene37187:CDS | 40.0% |
! | CCATTTGTGAAGAGTGGTTT+TGG | - | chr6.2:10934697-10934716 | None:intergenic | 40.0% |
! | CTAAGATGAAGTACCAGGAA+AGG | - | chr6.2:10934166-10934185 | None:intergenic | 40.0% |
! | CTCAGCTTTTGAATCTCGAT+AGG | - | chr6.2:10934055-10934074 | None:intergenic | 40.0% |
! | GATTGCAATCGGAGAGTTTT+GGG | + | chr6.2:10932574-10932593 | MS.gene37187:CDS | 40.0% |
! | TGATTGCAATCGGAGAGTTT+TGG | + | chr6.2:10932573-10932592 | MS.gene37187:CDS | 40.0% |
! | TTTTGGTCCTTTAATGTGCG+AGG | + | chr6.2:10934931-10934950 | MS.gene37187:intron | 40.0% |
AAACACGGACACGTTGACAT+CGG | + | chr6.2:10932781-10932800 | MS.gene37187:intron | 45.0% | |
AAGTTGTTGAAGGCCACAGA+AGG | + | chr6.2:10934786-10934805 | MS.gene37187:CDS | 45.0% | |
ACCTTGTGTTTCCGTATGAG+AGG | - | chr6.2:10933986-10934005 | None:intergenic | 45.0% | |
AGAGTTTCCTTCCTTACCTG+TGG | - | chr6.2:10934647-10934666 | None:intergenic | 45.0% | |
ATATCCGACCAACTAATCGG+GGG | - | chr6.2:10933849-10933868 | None:intergenic | 45.0% | |
ATGCAGCCATTTGTGAAGAG+TGG | - | chr6.2:10934703-10934722 | None:intergenic | 45.0% | |
CGCAGATTCTTCCTCTCATA+CGG | + | chr6.2:10933972-10933991 | MS.gene37187:intron | 45.0% | |
CGGACTGTGACCACAATATA+AGG | - | chr6.2:10932939-10932958 | None:intergenic | 45.0% | |
CTCTTCACAAATGGCTGCAT+TGG | + | chr6.2:10934703-10934722 | MS.gene37187:CDS | 45.0% | |
CTTACCTGTGGTAGTAGAAC+CGG | - | chr6.2:10934635-10934654 | None:intergenic | 45.0% | |
GAAATCTCATGCCAAGAGGA+TGG | + | chr6.2:10935405-10935424 | MS.gene37187:CDS | 45.0% | |
GAAGTGGCAAGCATTCATGA+GGG | - | chr6.2:10935495-10935514 | None:intergenic | 45.0% | |
GACAGCGTTTGACACATTCA+AGG | + | chr6.2:10935164-10935183 | MS.gene37187:intron | 45.0% | |
GCAGTTTCCTCAGGTGTTAA+CGG | - | chr6.2:10934423-10934442 | None:intergenic | 45.0% | |
GCGAGCTACTTATCCTAACT+TGG | + | chr6.2:10934536-10934555 | MS.gene37187:CDS | 45.0% | |
GCTGCTGGAGAAATATTTGG+TGG | + | chr6.2:10934492-10934511 | MS.gene37187:CDS | 45.0% | |
GGCATACCCTTCAACAACTT+TGG | - | chr6.2:10932602-10932621 | None:intergenic | 45.0% | |
TAAAGCCGAGGATCAAAGTG+TGG | + | chr6.2:10932501-10932520 | MS.gene37187:CDS | 45.0% | |
TCAACTCTTCTCTTGAGCCT+AGG | - | chr6.2:10933804-10933823 | None:intergenic | 45.0% | |
TCCTCTCATACGGAAACACA+AGG | + | chr6.2:10933982-10934001 | MS.gene37187:CDS | 45.0% | |
TCTACTACCACAGGTAAGGA+AGG | + | chr6.2:10934637-10934656 | MS.gene37187:intron | 45.0% | |
TGAAGTGGCAAGCATTCATG+AGG | - | chr6.2:10935496-10935515 | None:intergenic | 45.0% | |
TGGGGTCCAAAGTTGTTGAA+GGG | + | chr6.2:10932593-10932612 | MS.gene37187:CDS | 45.0% | |
TTGAGGAACTCACACGAATG+AGG | + | chr6.2:10934245-10934264 | MS.gene37187:CDS | 45.0% | |
TTGGGGTCCAAAGTTGTTGA+AGG | + | chr6.2:10932592-10932611 | MS.gene37187:CDS | 45.0% | |
! | ATGACCTTTTCCTTCCACCA+AGG | - | chr6.2:10934366-10934385 | None:intergenic | 45.0% |
! | TTTTCCGGTTCTACTACCAC+AGG | + | chr6.2:10934628-10934647 | MS.gene37187:intron | 45.0% |
!! | AGAGGTTTGTTGTAAAGCCG+AGG | + | chr6.2:10932489-10932508 | MS.gene37187:CDS | 45.0% |
!! | ATGGATATGTTGGCCTTCTC+TGG | + | chr6.2:10934193-10934212 | MS.gene37187:CDS | 45.0% |
!! | GATGCTCGACTTGCTAACAA+TGG | + | chr6.2:10934025-10934044 | MS.gene37187:CDS | 45.0% |
!! | GTCGAGCATCGGTCTTATTT+AGG | - | chr6.2:10934015-10934034 | None:intergenic | 45.0% |
!! | GTGAGGATTTTGAGGGAAAG+AGG | + | chr6.2:10934139-10934158 | MS.gene37187:CDS | 45.0% |
!!! | TTTTGGGTTTCCCATCCTCT+TGG | - | chr6.2:10935419-10935438 | None:intergenic | 45.0% |
!!! | GTTTTTTTTATAAAAAAAAA+AGG | - | chr6.2:10933226-10933245 | None:intergenic | 5.0% |
ACTCATTGCCCCCGATTAGT+TGG | + | chr6.2:10933838-10933857 | MS.gene37187:CDS | 50.0% | |
ACTCTTCTCTTGAGCCTAGG+TGG | - | chr6.2:10933801-10933820 | None:intergenic | 50.0% | |
ATGTGATAGCAGCGAGGTTG+AGG | + | chr6.2:10934228-10934247 | MS.gene37187:CDS | 50.0% | |
CCAAGATGCATCTTCAGCTG+TGG | + | chr6.2:10932637-10932656 | MS.gene37187:CDS | 50.0% | |
CCACAGCTGAAGATGCATCT+TGG | - | chr6.2:10932640-10932659 | None:intergenic | 50.0% | |
CGGTTCTACTACCACAGGTA+AGG | + | chr6.2:10934633-10934652 | MS.gene37187:intron | 50.0% | |
GCCATCCACACTTTGATCCT+CGG | - | chr6.2:10932509-10932528 | None:intergenic | 50.0% | |
GGTAAGGAAGGAAACTCTGC+TGG | + | chr6.2:10934649-10934668 | MS.gene37187:intron | 50.0% | |
TCATGGATGTGATAGCAGCG+AGG | + | chr6.2:10934222-10934241 | MS.gene37187:CDS | 50.0% | |
TGGCAAGCATTCATGAGGGT+TGG | - | chr6.2:10935491-10935510 | None:intergenic | 50.0% | |
TGGTCCTTTAATGTGCGAGG+CGG | + | chr6.2:10934934-10934953 | MS.gene37187:intron | 50.0% | |
TGTAGCGAAGGCTAGCGTTT+CGG | + | chr6.2:10932661-10932680 | MS.gene37187:CDS | 50.0% | |
TTCAGCTGTGGTTGTAGCGA+AGG | + | chr6.2:10932649-10932668 | MS.gene37187:CDS | 50.0% | |
! | ATTGCCCCCGATTAGTTGGT+CGG | + | chr6.2:10933842-10933861 | MS.gene37187:CDS | 50.0% |
GAAGGCTAGCGTTTCGGCTA+AGG | + | chr6.2:10932667-10932686 | MS.gene37187:CDS | 55.0% | |
GACACCGCCTCGCACATTAA+AGG | - | chr6.2:10934941-10934960 | None:intergenic | 55.0% | |
GAGGGAAAGAGGACCTTTCC+TGG | + | chr6.2:10934150-10934169 | MS.gene37187:CDS | 55.0% | |
GCCGAGGATCAAAGTGTGGA+TGG | + | chr6.2:10932505-10932524 | MS.gene37187:CDS | 55.0% | |
TCCATGAGTGCAGCCAGAGA+AGG | - | chr6.2:10934209-10934228 | None:intergenic | 55.0% | |
CGTCATTCTGGGCCGATCCA+AGG | + | chr6.2:10933580-10933599 | MS.gene37187:CDS | 60.0% | |
GCCTTCTCTGGCTGCACTCA+TGG | + | chr6.2:10934205-10934224 | MS.gene37187:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 10932383 | 10935528 | 10932383 | ID=MS.gene37187 |
chr6.2 | mRNA | 10932383 | 10935528 | 10932383 | ID=MS.gene37187.t1;Parent=MS.gene37187 |
chr6.2 | exon | 10932383 | 10932707 | 10932383 | ID=MS.gene37187.t1.exon1;Parent=MS.gene37187.t1 |
chr6.2 | CDS | 10932383 | 10932707 | 10932383 | ID=cds.MS.gene37187.t1;Parent=MS.gene37187.t1 |
chr6.2 | exon | 10933336 | 10933403 | 10933336 | ID=MS.gene37187.t1.exon2;Parent=MS.gene37187.t1 |
chr6.2 | CDS | 10933336 | 10933403 | 10933336 | ID=cds.MS.gene37187.t1;Parent=MS.gene37187.t1 |
chr6.2 | exon | 10933513 | 10933601 | 10933513 | ID=MS.gene37187.t1.exon3;Parent=MS.gene37187.t1 |
chr6.2 | CDS | 10933513 | 10933601 | 10933513 | ID=cds.MS.gene37187.t1;Parent=MS.gene37187.t1 |
chr6.2 | exon | 10933722 | 10933887 | 10933722 | ID=MS.gene37187.t1.exon4;Parent=MS.gene37187.t1 |
chr6.2 | CDS | 10933722 | 10933887 | 10933722 | ID=cds.MS.gene37187.t1;Parent=MS.gene37187.t1 |
chr6.2 | exon | 10933977 | 10934266 | 10933977 | ID=MS.gene37187.t1.exon5;Parent=MS.gene37187.t1 |
chr6.2 | CDS | 10933977 | 10934266 | 10933977 | ID=cds.MS.gene37187.t1;Parent=MS.gene37187.t1 |
chr6.2 | exon | 10934353 | 10934557 | 10934353 | ID=MS.gene37187.t1.exon6;Parent=MS.gene37187.t1 |
chr6.2 | CDS | 10934353 | 10934557 | 10934353 | ID=cds.MS.gene37187.t1;Parent=MS.gene37187.t1 |
chr6.2 | exon | 10934650 | 10934807 | 10934650 | ID=MS.gene37187.t1.exon7;Parent=MS.gene37187.t1 |
chr6.2 | CDS | 10934650 | 10934807 | 10934650 | ID=cds.MS.gene37187.t1;Parent=MS.gene37187.t1 |
chr6.2 | exon | 10935294 | 10935528 | 10935294 | ID=MS.gene37187.t1.exon8;Parent=MS.gene37187.t1 |
chr6.2 | CDS | 10935294 | 10935528 | 10935294 | ID=cds.MS.gene37187.t1;Parent=MS.gene37187.t1 |
Gene Sequence |
Protein sequence |