Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37459.t1 | XP_013461819.1 | 98.9 | 703 | 2 | 3 | 1 | 702 | 1 | 698 | 0.00E+00 | 1346.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37459.t1 | Q9ZQB9 | 78.0 | 713 | 132 | 8 | 1 | 702 | 1 | 699 | 2.8e-312 | 1072.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37459.t1 | A0A072V1K1 | 98.9 | 703 | 2 | 3 | 1 | 702 | 1 | 698 | 0.0e+00 | 1346.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049243 | MS.gene37459 | 0.804255 | 2.36E-49 | -1.69E-46 |
| MS.gene049418 | MS.gene37459 | 0.800695 | 1.28E-48 | -1.69E-46 |
| MS.gene050009 | MS.gene37459 | 0.822095 | 2.84E-53 | -1.69E-46 |
| MS.gene050297 | MS.gene37459 | 0.830272 | 3.22E-55 | -1.69E-46 |
| MS.gene050894 | MS.gene37459 | 0.826384 | 2.79E-54 | -1.69E-46 |
| MS.gene051067 | MS.gene37459 | 0.853491 | 2.31E-61 | -1.69E-46 |
| MS.gene051885 | MS.gene37459 | 0.816827 | 4.52E-52 | -1.69E-46 |
| MS.gene052732 | MS.gene37459 | 0.819926 | 8.99E-53 | -1.69E-46 |
| MS.gene053143 | MS.gene37459 | 0.820456 | 6.80E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene37459 | 0.839038 | 2.01E-57 | -1.69E-46 |
| MS.gene053171 | MS.gene37459 | 0.811799 | 5.84E-51 | -1.69E-46 |
| MS.gene053536 | MS.gene37459 | 0.806711 | 7.20E-50 | -1.69E-46 |
| MS.gene053538 | MS.gene37459 | 0.804689 | 1.92E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene37459 | 0.818661 | 1.74E-52 | -1.69E-46 |
| MS.gene054584 | MS.gene37459 | 0.831376 | 1.73E-55 | -1.69E-46 |
| MS.gene054585 | MS.gene37459 | 0.836721 | 7.92E-57 | -1.69E-46 |
| MS.gene055331 | MS.gene37459 | 0.812492 | 4.13E-51 | -1.69E-46 |
| MS.gene055537 | MS.gene37459 | 0.800325 | 1.52E-48 | -1.69E-46 |
| MS.gene055764 | MS.gene37459 | 0.827066 | 1.92E-54 | -1.69E-46 |
| MS.gene056266 | MS.gene37459 | -0.811877 | 5.62E-51 | -1.69E-46 |
| MS.gene056398 | MS.gene37459 | 0.831531 | 1.58E-55 | -1.69E-46 |
| MS.gene057683 | MS.gene37459 | 0.802411 | 5.68E-49 | -1.69E-46 |
| MS.gene058720 | MS.gene37459 | 0.812739 | 3.64E-51 | -1.69E-46 |
| MS.gene059424 | MS.gene37459 | 0.80648 | 8.06E-50 | -1.69E-46 |
| MS.gene060359 | MS.gene37459 | 0.824388 | 8.29E-54 | -1.69E-46 |
| MS.gene06057 | MS.gene37459 | 0.805366 | 1.38E-49 | -1.69E-46 |
| MS.gene060855 | MS.gene37459 | 0.825216 | 5.29E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37459 | MS.gene073023 | PPI |
| MS.gene40373 | MS.gene37459 | PPI |
| MS.gene37459 | MS.gene022823 | PPI |
| MS.gene37459 | MS.gene014716 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37459.t1 | MTR_3g103500 | 98.862 | 703 | 2 | 3 | 1 | 702 | 1 | 698 | 0.0 | 1417 |
| MS.gene37459.t1 | MTR_3g103500 | 97.984 | 496 | 5 | 2 | 1 | 496 | 1 | 491 | 0.0 | 1006 |
| MS.gene37459.t1 | MTR_3g109040 | 64.665 | 716 | 210 | 11 | 1 | 702 | 1 | 687 | 0.0 | 908 |
| MS.gene37459.t1 | MTR_3g109040 | 65.106 | 705 | 206 | 10 | 9 | 702 | 1 | 676 | 0.0 | 904 |
| MS.gene37459.t1 | MTR_4g006010 | 64.697 | 694 | 218 | 5 | 15 | 702 | 27 | 699 | 0.0 | 884 |
| MS.gene37459.t1 | MTR_6g007807 | 66.261 | 658 | 186 | 8 | 53 | 701 | 35 | 665 | 0.0 | 848 |
| MS.gene37459.t1 | MTR_8g012320 | 66.516 | 663 | 191 | 7 | 46 | 701 | 63 | 701 | 0.0 | 838 |
| MS.gene37459.t1 | MTR_1g061510 | 42.125 | 527 | 273 | 5 | 176 | 698 | 19 | 517 | 1.49e-147 | 440 |
| MS.gene37459.t1 | MTR_1g061340 | 41.176 | 527 | 278 | 5 | 176 | 698 | 19 | 517 | 1.97e-146 | 437 |
| MS.gene37459.t1 | MTR_1g061270 | 41.635 | 526 | 276 | 3 | 176 | 698 | 19 | 516 | 7.92e-146 | 436 |
| MS.gene37459.t1 | MTR_1g061280 | 40.678 | 531 | 283 | 5 | 176 | 702 | 19 | 521 | 9.57e-145 | 433 |
| MS.gene37459.t1 | MTR_7g103590 | 41.556 | 527 | 276 | 5 | 176 | 698 | 28 | 526 | 5.37e-144 | 431 |
| MS.gene37459.t1 | MTR_1g492700 | 45.513 | 468 | 226 | 4 | 232 | 698 | 85 | 524 | 6.74e-144 | 431 |
| MS.gene37459.t1 | MTR_4g055520 | 41.746 | 527 | 280 | 7 | 185 | 701 | 33 | 542 | 4.44e-139 | 419 |
| MS.gene37459.t1 | MTR_7g101950 | 40.377 | 530 | 285 | 6 | 176 | 701 | 25 | 527 | 5.86e-138 | 416 |
| MS.gene37459.t1 | MTR_4g055520 | 46.512 | 430 | 217 | 4 | 185 | 604 | 33 | 459 | 3.37e-135 | 407 |
| MS.gene37459.t1 | MTR_4g055520 | 43.304 | 448 | 239 | 4 | 255 | 701 | 29 | 462 | 2.74e-130 | 393 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37459.t1 | AT4G07960 | 76.999 | 713 | 139 | 8 | 1 | 702 | 1 | 699 | 0.0 | 1070 |
| MS.gene37459.t1 | AT4G07960 | 76.999 | 713 | 139 | 8 | 1 | 702 | 1 | 699 | 0.0 | 1070 |
| MS.gene37459.t1 | AT4G31590 | 65.406 | 714 | 213 | 8 | 1 | 702 | 1 | 692 | 0.0 | 925 |
| MS.gene37459.t1 | AT2G24630 | 63.394 | 713 | 227 | 7 | 1 | 702 | 1 | 690 | 0.0 | 903 |
| MS.gene37459.t1 | AT2G24630 | 63.394 | 713 | 227 | 7 | 1 | 702 | 1 | 690 | 0.0 | 903 |
| MS.gene37459.t1 | AT3G28180 | 64.011 | 703 | 200 | 11 | 18 | 702 | 6 | 673 | 0.0 | 862 |
| MS.gene37459.t1 | AT3G07330 | 64.253 | 663 | 198 | 7 | 51 | 702 | 48 | 682 | 0.0 | 845 |
| MS.gene37459.t1 | AT3G07330 | 64.253 | 663 | 198 | 7 | 51 | 702 | 48 | 682 | 0.0 | 845 |
| MS.gene37459.t1 | AT5G22740 | 41.431 | 531 | 279 | 5 | 176 | 701 | 29 | 532 | 3.96e-143 | 429 |
| MS.gene37459.t1 | AT5G03760 | 40.755 | 530 | 276 | 5 | 179 | 701 | 32 | 530 | 7.90e-140 | 421 |
| MS.gene37459.t1 | AT1G23480 | 40.678 | 531 | 282 | 5 | 176 | 701 | 51 | 553 | 4.27e-139 | 419 |
| MS.gene37459.t1 | AT1G23480 | 40.678 | 531 | 282 | 5 | 176 | 701 | 51 | 553 | 4.27e-139 | 419 |
| MS.gene37459.t1 | AT2G35650 | 41.199 | 517 | 269 | 5 | 176 | 688 | 51 | 536 | 4.41e-138 | 417 |
| MS.gene37459.t1 | AT5G16190 | 40.987 | 527 | 278 | 6 | 176 | 698 | 6 | 503 | 8.04e-137 | 412 |
| MS.gene37459.t1 | AT4G13410 | 44.444 | 459 | 245 | 5 | 176 | 630 | 43 | 495 | 1.78e-136 | 412 |
| MS.gene37459.t1 | AT1G23480 | 41.223 | 507 | 265 | 5 | 200 | 701 | 3 | 481 | 1.89e-135 | 407 |
| MS.gene37459.t1 | AT5G16190 | 45.638 | 447 | 238 | 4 | 176 | 618 | 6 | 451 | 1.02e-134 | 405 |
| MS.gene37459.t1 | AT5G16190 | 43.376 | 468 | 235 | 4 | 232 | 698 | 4 | 442 | 3.30e-134 | 403 |
| MS.gene37459.t1 | AT1G24070 | 38.621 | 580 | 319 | 8 | 125 | 698 | 3 | 551 | 4.37e-134 | 406 |
| MS.gene37459.t1 | AT2G35650 | 43.668 | 458 | 226 | 4 | 232 | 688 | 38 | 464 | 4.78e-134 | 404 |
| MS.gene37459.t1 | AT2G35650 | 43.668 | 458 | 226 | 4 | 232 | 688 | 38 | 464 | 4.78e-134 | 404 |
| MS.gene37459.t1 | AT3G56000 | 40.377 | 530 | 279 | 6 | 180 | 701 | 26 | 526 | 8.42e-131 | 397 |
| MS.gene37459.t1 | AT5G16190 | 38.571 | 560 | 278 | 7 | 176 | 698 | 6 | 536 | 1.31e-129 | 394 |
| MS.gene37459.t1 | AT4G16590 | 37.879 | 528 | 259 | 8 | 176 | 698 | 56 | 519 | 2.89e-117 | 362 |
| MS.gene37459.t1 | AT1G23480 | 41.205 | 415 | 216 | 2 | 288 | 701 | 21 | 408 | 2.20e-112 | 345 |
| MS.gene37459.t1 | AT4G13410 | 47.633 | 338 | 171 | 2 | 294 | 630 | 2 | 334 | 5.21e-110 | 338 |
| MS.gene37459.t1 | AT2G35650 | 41.337 | 404 | 206 | 3 | 286 | 688 | 5 | 378 | 2.56e-108 | 334 |
| MS.gene37459.t1 | AT4G13410 | 47.516 | 322 | 165 | 3 | 176 | 494 | 43 | 363 | 7.26e-99 | 310 |
| MS.gene37459.t1 | AT1G24070 | 42.373 | 413 | 219 | 6 | 125 | 532 | 3 | 401 | 2.21e-98 | 309 |
Find 152 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATCAAAGATTGTGTAAT+TGG | 0.117866 | 3.4:+91097909 | None:intergenic |
| CAGCAGCTCTATGAGCTTTA+AGG | 0.164902 | 3.4:+91098667 | None:intergenic |
| AGTTCATCAATGTCCCAATT+TGG | 0.224089 | 3.4:+91098795 | None:intergenic |
| TATTGCAGCAGTGTGTAATT+TGG | 0.228223 | 3.4:-91097982 | MS.gene37459:CDS |
| CTGTAAGCTTCGTAAGATTC+AGG | 0.244033 | 3.4:+91097095 | None:intergenic |
| GATAGATTGGTTCTTTGTTT+AGG | 0.262317 | 3.4:-91098255 | MS.gene37459:CDS |
| CAAATTGCTCCTGCATTGTT+TGG | 0.262621 | 3.4:-91098633 | MS.gene37459:CDS |
| AAATGGCACCTTTGTTCAAT+TGG | 0.282770 | 3.4:-91098869 | MS.gene37459:CDS |
| AATTACACAATCTTTGATTA+AGG | 0.283313 | 3.4:-91097907 | MS.gene37459:CDS |
| CTTGTTGTTCCACTTCAAAA+TGG | 0.290451 | 3.4:+91097402 | None:intergenic |
| GGGCACCGACATTTGGTGTT+AGG | 0.298422 | 3.4:-91098392 | MS.gene37459:CDS |
| GTCAAACGCCGCGTCGCTTC+TGG | 0.301307 | 3.4:-91098597 | MS.gene37459:CDS |
| TTGGTTGGTCTAGACTTAAT+TGG | 0.308940 | 3.4:-91096002 | MS.gene37459:CDS |
| CATTGAACCCAAAGAAATTA+AGG | 0.311415 | 3.4:+91097366 | None:intergenic |
| TCTGAAACATCACCACCTTT+TGG | 0.311924 | 3.4:+91098195 | None:intergenic |
| CTACAGGATAATGACGAATT+AGG | 0.322967 | 3.4:-91097503 | MS.gene37459:intron |
| CTTAATTTCTTTGGGTTCAA+TGG | 0.325307 | 3.4:-91097365 | MS.gene37459:CDS |
| ACTATGAAAGGAAAAGCTTT+TGG | 0.326733 | 3.4:+91096401 | None:intergenic |
| GCTGTTCGAGCTCATCTTCA+TGG | 0.327528 | 3.4:-91097260 | MS.gene37459:CDS |
| TTTCACATAGCTACAATTCA+TGG | 0.336791 | 3.4:+91097791 | None:intergenic |
| GAGGACCACTGTGGAGGATA+TGG | 0.337343 | 3.4:-91097288 | MS.gene37459:CDS |
| ATCTATCTATACTCTGAATA+AGG | 0.344333 | 3.4:+91098271 | None:intergenic |
| GATGACCCTCGTTGATGCTT+TGG | 0.351008 | 3.4:+91096227 | None:intergenic |
| AATAGAGTGAACGAGTAAAA+TGG | 0.354129 | 3.4:+91096530 | None:intergenic |
| AATGGCACCTTTGTTCAATT+GGG | 0.361924 | 3.4:-91098868 | MS.gene37459:CDS |
| CCGACATGGTGTTCTCAAAT+AGG | 0.365826 | 3.4:+91096369 | None:intergenic |
| TTGTTTGCCTGATGTCATAA+AGG | 0.368029 | 3.4:-91097024 | MS.gene37459:CDS |
| TCTTTCATTTCTTCCAGATC+AGG | 0.374102 | 3.4:+91096200 | None:intergenic |
| TATTCAGAGTATAGATAGAT+TGG | 0.375619 | 3.4:-91098268 | MS.gene37459:CDS |
| TTTGGGTTCAATGGTACTGC+TGG | 0.378978 | 3.4:-91097356 | MS.gene37459:CDS |
| CAGCAGCATAGATGGCATTC+TGG | 0.380899 | 3.4:-91097068 | MS.gene37459:CDS |
| GATGTTTCAGATCTTGAATC+TGG | 0.386991 | 3.4:-91098183 | MS.gene37459:CDS |
| GATCTTGAATCTGGAGATAA+GGG | 0.389985 | 3.4:-91098174 | MS.gene37459:CDS |
| TTAAGGAGGAGGTTCATAAA+TGG | 0.393056 | 3.4:-91097890 | MS.gene37459:CDS |
| GTATTTGAAGGAACTTGCTT+TGG | 0.396618 | 3.4:-91096117 | MS.gene37459:CDS |
| AAGAAATGAAAGAGGAAATC+AGG | 0.399107 | 3.4:-91096190 | MS.gene37459:CDS |
| TCAATGGTACTGCTGGAGTT+TGG | 0.399721 | 3.4:-91097349 | MS.gene37459:CDS |
| AGGGTCATCAGCACCTGATC+TGG | 0.403205 | 3.4:-91096213 | MS.gene37459:CDS |
| ACCTTGGCCTTTATGACATC+AGG | 0.403380 | 3.4:+91097017 | None:intergenic |
| ACAGAAAACAGCAGCATAGA+TGG | 0.412430 | 3.4:-91097076 | MS.gene37459:CDS |
| TGCTCCACATCTTGAATTGT+GGG | 0.424265 | 3.4:-91098412 | MS.gene37459:CDS |
| GAATTGTGGGCACCGACATT+TGG | 0.427447 | 3.4:-91098399 | MS.gene37459:CDS |
| TGCTGGAGTTTGGAGAATAA+AGG | 0.431597 | 3.4:-91097339 | MS.gene37459:CDS |
| ACGCACTTCCTAGCTGGAAT+AGG | 0.438031 | 3.4:+91096318 | None:intergenic |
| TAATCAAAGATTGTGTAATT+GGG | 0.439751 | 3.4:+91097910 | None:intergenic |
| AGATAAGGGTTTCTTCCCTA+TGG | 0.441243 | 3.4:-91098160 | MS.gene37459:CDS |
| AGATCTTGAATCTGGAGATA+AGG | 0.445844 | 3.4:-91098175 | MS.gene37459:CDS |
| CTTTCTTGCAGATAAGCATA+TGG | 0.446258 | 3.4:-91096604 | MS.gene37459:intron |
| CAAGGTGTTTCTATGTTTGT+CGG | 0.458917 | 3.4:-91098487 | MS.gene37459:CDS |
| AGTTTGGAGAATAAAGGCTT+TGG | 0.460085 | 3.4:-91097333 | MS.gene37459:CDS |
| AAATTCAATGCTATGATCTC+AGG | 0.461079 | 3.4:-91096341 | MS.gene37459:CDS |
| CTTAAAGCTCATAGAGCTGC+TGG | 0.464353 | 3.4:-91098666 | MS.gene37459:CDS |
| TCTTCAAGAGACAAAGGAAA+AGG | 0.476352 | 3.4:-91098723 | MS.gene37459:CDS |
| GGCACCGACATTTGGTGTTA+GGG | 0.481814 | 3.4:-91098391 | MS.gene37459:CDS |
| ATTCGTACGCACTTCCTAGC+TGG | 0.482898 | 3.4:+91096312 | None:intergenic |
| TGGGACATTGATGAACTTGA+AGG | 0.483005 | 3.4:-91098789 | MS.gene37459:CDS |
| AACAACCCACGCAGGAATCT+CGG | 0.484233 | 3.4:+91096469 | None:intergenic |
| ACAATCTTTGATTAAGGAGG+AGG | 0.486658 | 3.4:-91097901 | MS.gene37459:CDS |
| GTGCTCCACATCTTGAATTG+TGG | 0.487800 | 3.4:-91098413 | MS.gene37459:CDS |
| AGCTAGGAAGTGCGTACGAA+TGG | 0.488925 | 3.4:-91096310 | MS.gene37459:CDS |
| AGAAGCGACGCGGCGTTTGA+CGG | 0.489772 | 3.4:+91098599 | None:intergenic |
| AAAATTAAACCTGTTCCAAA+AGG | 0.496075 | 3.4:-91098210 | MS.gene37459:CDS |
| TTCTACTTCTTGCTATTCCA+AGG | 0.497931 | 3.4:-91096038 | MS.gene37459:CDS |
| CGGTGGTGTTGGTGGTGGTA+GGG | 0.498109 | 3.4:-91098553 | MS.gene37459:CDS |
| ATCAGGGGTAGGCTGAAAAT+CGG | 0.498763 | 3.4:+91097740 | None:intergenic |
| TAAGAAGTCCGGTCGTTCAT+CGG | 0.499552 | 3.4:-91096279 | MS.gene37459:CDS |
| TTTAGTAGTACCTTAAAATG+AGG | 0.500382 | 3.4:+91097699 | None:intergenic |
| TAGGACTTGTGCAAGCTAGA+TGG | 0.503401 | 3.4:-91097484 | MS.gene37459:CDS |
| CCCCATGTGCAATGAGAAAG+AGG | 0.505230 | 3.4:-91098124 | MS.gene37459:intron |
| CACGCAGGAATCTCGGCCTC+CGG | 0.505996 | 3.4:+91096476 | None:intergenic |
| ATTAGAGATGGGTACAAAGC+TGG | 0.509776 | 3.4:-91097828 | MS.gene37459:CDS |
| ATCGACGGTGGTGTTGGTGG+TGG | 0.510363 | 3.4:-91098558 | MS.gene37459:CDS |
| AAAAGTAAATCTTCTTCTGA+AGG | 0.511562 | 3.4:+91098765 | None:intergenic |
| ACATAACAAAATGTATTTGA+AGG | 0.516862 | 3.4:-91096129 | MS.gene37459:CDS |
| GCGGATATCGACGGTGGTGT+TGG | 0.521978 | 3.4:-91098564 | MS.gene37459:CDS |
| TTGAGAAATGACATGACTGC+TGG | 0.523060 | 3.4:+91096437 | None:intergenic |
| ATCACCCTCCGATGAACGAC+CGG | 0.523064 | 3.4:+91096271 | None:intergenic |
| ACGGTGGTGTTGGTGGTGGT+AGG | 0.524657 | 3.4:-91098554 | MS.gene37459:CDS |
| CAGCAGTGTGTAATTTGGAT+TGG | 0.524727 | 3.4:-91097977 | MS.gene37459:CDS |
| GGGATCTGAACAAGAACCAT+AGG | 0.528282 | 3.4:+91098144 | None:intergenic |
| GCAACACCAACTTTCTAAGA+AGG | 0.529828 | 3.4:+91096552 | None:intergenic |
| CCTCTTTCTCATTGCACATG+GGG | 0.530589 | 3.4:+91098124 | None:intergenic |
| CGACACCGTGTGATTAGAGA+TGG | 0.531408 | 3.4:-91097840 | MS.gene37459:CDS |
| ACCTCTTTCTCATTGCACAT+GGG | 0.534788 | 3.4:+91098123 | None:intergenic |
| TTCGAGCTCATCTTCATGGA+TGG | 0.538595 | 3.4:-91097256 | MS.gene37459:CDS |
| CAAAGGCGAAACAATTGCAT+TGG | 0.541740 | 3.4:+91097044 | None:intergenic |
| AGAACCCTACAGTGAAAAGT+AGG | 0.543807 | 3.4:-91098524 | MS.gene37459:CDS |
| AGGAGATACGGTACTATGAA+AGG | 0.544564 | 3.4:+91096389 | None:intergenic |
| AAGCTGGTGGTTGGTTGGAG+AGG | 0.544703 | 3.4:-91097307 | MS.gene37459:CDS |
| TACACAATCTTTGATTAAGG+AGG | 0.545280 | 3.4:-91097904 | MS.gene37459:CDS |
| AGGAGTCTACTTTCAGCTCA+AGG | 0.545457 | 3.4:-91096068 | MS.gene37459:CDS |
| GCTAGGAAGTGCGTACGAAT+GGG | 0.547002 | 3.4:-91096309 | MS.gene37459:CDS |
| TACCTCTTTCTCATTGCACA+TGG | 0.547325 | 3.4:+91098122 | None:intergenic |
| GATATCGACGGTGGTGTTGG+TGG | 0.547514 | 3.4:-91098561 | MS.gene37459:CDS |
| ATGGCACCTTTGTTCAATTG+GGG | 0.552161 | 3.4:-91098867 | MS.gene37459:CDS |
| GTTCATAAATGGCAAGAAGA+AGG | 0.553785 | 3.4:-91097879 | MS.gene37459:CDS |
| ATAAAGGCTTTGGAAGAAGC+TGG | 0.554855 | 3.4:-91097323 | MS.gene37459:CDS |
| TGGGTAGTCACTAAGAAGTC+CGG | 0.559717 | 3.4:-91096290 | MS.gene37459:CDS |
| TGATCTGGAAGAAATGAAAG+AGG | 0.560195 | 3.4:-91096198 | MS.gene37459:CDS |
| GGAAGAAGCTGGTGGTTGGT+TGG | 0.560517 | 3.4:-91097312 | MS.gene37459:CDS |
| GTGTTCTCAAATAGGAGATA+CGG | 0.560798 | 3.4:+91096377 | None:intergenic |
| TTCTTAAGGAAATCAGGGGT+AGG | 0.562002 | 3.4:+91097729 | None:intergenic |
| CTTTGGAAGAAGCTGGTGGT+TGG | 0.566030 | 3.4:-91097316 | MS.gene37459:CDS |
| GAAGTCCGGTCGTTCATCGG+AGG | 0.568647 | 3.4:-91096276 | MS.gene37459:CDS |
| GCCTGATGTCATAAAGGCCA+AGG | 0.569837 | 3.4:-91097018 | MS.gene37459:intron |
| ATTAAACCTGTTCCAAAAGG+TGG | 0.570493 | 3.4:-91098207 | MS.gene37459:CDS |
| TCCCATGACAATGTTCGTAC+CGG | 0.571170 | 3.4:-91096495 | MS.gene37459:CDS |
| GGAGTCTACTTTCAGCTCAA+GGG | 0.571457 | 3.4:-91096067 | MS.gene37459:CDS |
| AAAACGCTAAACAACTCACA+TGG | 0.573149 | 3.4:-91098698 | MS.gene37459:CDS |
| CTCCGGTACGAACATTGTCA+TGG | 0.573525 | 3.4:+91096493 | None:intergenic |
| AATTCTTCTTCAAGAGACAA+AGG | 0.578590 | 3.4:-91098729 | MS.gene37459:CDS |
| GGAGGCCGAGATTCCTGCGT+GGG | 0.590482 | 3.4:-91096474 | MS.gene37459:CDS |
| GAAACTAAACCAAACAATGC+AGG | 0.595411 | 3.4:+91098624 | None:intergenic |
| TTTGTGAGAAATTGCAAAGG+AGG | 0.595685 | 3.4:+91098312 | None:intergenic |
| AAGTCCGGTCGTTCATCGGA+GGG | 0.596120 | 3.4:-91096275 | MS.gene37459:CDS |
| TAGGTTCTATACATTCATCA+AGG | 0.599235 | 3.4:-91098505 | MS.gene37459:CDS |
| TTCACACCCCAATTGAACAA+AGG | 0.601044 | 3.4:+91098861 | None:intergenic |
| TCCGGTACGAACATTGTCAT+GGG | 0.602923 | 3.4:+91096494 | None:intergenic |
| AGAGGAAATCAGGAGACAAG+AGG | 0.607350 | 3.4:-91096180 | MS.gene37459:CDS |
| ACGGTGTCGGTACAAAATGT+TGG | 0.614765 | 3.4:+91097854 | None:intergenic |
| GGTGCCCACAATTCAAGATG+TGG | 0.618003 | 3.4:+91098408 | None:intergenic |
| CATGACAATGTTCGTACCGG+AGG | 0.621883 | 3.4:-91096492 | MS.gene37459:CDS |
| ATCTCAGGCCTATTCCAGCT+AGG | 0.627956 | 3.4:-91096326 | MS.gene37459:CDS |
| AGCGACGCGGCGTTTGACGG+CGG | 0.631539 | 3.4:+91098602 | None:intergenic |
| AAGATTCAGGTAACTCACAT+TGG | 0.636142 | 3.4:+91097108 | None:intergenic |
| GGATCTGAACAAGAACCATA+GGG | 0.636957 | 3.4:+91098145 | None:intergenic |
| TGAGAAATGACATGACTGCT+GGG | 0.640975 | 3.4:+91096438 | None:intergenic |
| GCAGTACCTCCACATCATTG+AGG | 0.643002 | 3.4:+91097222 | None:intergenic |
| TTATGACATCAGGCAAACAA+AGG | 0.646531 | 3.4:+91097027 | None:intergenic |
| AGAACCGACGCGGATATCGA+CGG | 0.646947 | 3.4:-91098573 | MS.gene37459:CDS |
| AGGATGAGAATCTTCTAACA+AGG | 0.648818 | 3.4:-91097448 | MS.gene37459:CDS |
| CGGTTCTACCAGAAGCGACG+CGG | 0.649354 | 3.4:+91098589 | None:intergenic |
| CCTATTTGAGAACACCATGT+CGG | 0.660812 | 3.4:-91096369 | MS.gene37459:CDS |
| GACACCGTGTGATTAGAGAT+GGG | 0.666771 | 3.4:-91097839 | MS.gene37459:CDS |
| CGCTTCTGGTAGAACCGACG+CGG | 0.667172 | 3.4:-91098583 | MS.gene37459:CDS |
| GCATTTGTGAGAAATTGCAA+AGG | 0.670287 | 3.4:+91098309 | None:intergenic |
| GTTGGAGAGGACCACTGTGG+AGG | 0.676327 | 3.4:-91097294 | MS.gene37459:CDS |
| CATCTCTAATCACACGGTGT+CGG | 0.680410 | 3.4:+91097841 | None:intergenic |
| TGTACCCATCTCTAATCACA+CGG | 0.680975 | 3.4:+91097835 | None:intergenic |
| ACATCCCTAACACCAAATGT+CGG | 0.680982 | 3.4:+91098387 | None:intergenic |
| AAACGCTAAACAACTCACAT+GGG | 0.684108 | 3.4:-91098697 | MS.gene37459:CDS |
| ACCACCGTCGATATCCGCGT+CGG | 0.706571 | 3.4:+91098569 | None:intergenic |
| AAGGCTTTGGAAGAAGCTGG+TGG | 0.707444 | 3.4:-91097320 | MS.gene37459:CDS |
| ATATAACAAACAACCCACGC+AGG | 0.712609 | 3.4:+91096461 | None:intergenic |
| CGGAGGCCGAGATTCCTGCG+TGG | 0.712962 | 3.4:-91096475 | MS.gene37459:CDS |
| AGAAACCAAAGCATCAACGA+GGG | 0.719081 | 3.4:-91096232 | MS.gene37459:CDS |
| GGTGTGAAAGAAAGTCACAA+AGG | 0.719480 | 3.4:-91098846 | MS.gene37459:CDS |
| AAGTCACAAAGGAACACCAG+TGG | 0.729436 | 3.4:-91098835 | MS.gene37459:CDS |
| GAGAAACCAAAGCATCAACG+AGG | 0.730620 | 3.4:-91096233 | MS.gene37459:CDS |
| TTGGTTGGAGAGGACCACTG+TGG | 0.738638 | 3.4:-91097297 | MS.gene37459:CDS |
| ACCGACGCGGATATCGACGG+TGG | 0.749510 | 3.4:-91098570 | MS.gene37459:CDS |
| AATGTCCATATCCTCCACAG+TGG | 0.778249 | 3.4:+91097283 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATATTTGATTGGATT+TGG | - | chr3.4:91097309-91097328 | MS.gene37459:CDS | 15.0% |
| !!! | AATTGATTGATGATTAATTT+AGG | - | chr3.4:91097175-91097194 | MS.gene37459:intron | 15.0% |
| !!! | TTTTGTTGTTATGTTTTTTA+AGG | - | chr3.4:91096835-91096854 | MS.gene37459:intron | 15.0% |
| !! | AAACAAAATTTCCATGAAAA+GGG | + | chr3.4:91097884-91097903 | None:intergenic | 20.0% |
| !! | AATTACACAATCTTTGATTA+AGG | - | chr3.4:91096946-91096965 | MS.gene37459:intron | 20.0% |
| !! | ACATAACAAAATGTATTTGA+AGG | - | chr3.4:91098724-91098743 | MS.gene37459:CDS | 20.0% |
| !! | AGATAAACAAAACAAACATT+TGG | + | chr3.4:91097681-91097700 | None:intergenic | 20.0% |
| !! | ATCGAAATTACCAAAAAAAA+AGG | - | chr3.4:91097961-91097980 | MS.gene37459:CDS | 20.0% |
| !! | TAATCAAAGATTGTGTAATT+GGG | + | chr3.4:91096946-91096965 | None:intergenic | 20.0% |
| !! | TTAATCAAAGATTGTGTAAT+TGG | + | chr3.4:91096947-91096966 | None:intergenic | 20.0% |
| !!! | AATGTTTGTTTTGTTTATCT+TGG | - | chr3.4:91097681-91097700 | MS.gene37459:intron | 20.0% |
| !!! | GTGTTTTGTTAGTAATTTTA+CGG | + | chr3.4:91098100-91098119 | None:intergenic | 20.0% |
| !!! | TGAATCAAAAAATTGGATTT+TGG | + | chr3.4:91096902-91096921 | None:intergenic | 20.0% |
| !!! | TTTATGTATGCCTTTTTTTT+TGG | + | chr3.4:91097974-91097993 | None:intergenic | 20.0% |
| ! | AAAAATGGAGAATCCAAATT+GGG | - | chr3.4:91096045-91096064 | MS.gene37459:CDS | 25.0% |
| ! | AAAAGTAAATCTTCTTCTGA+AGG | + | chr3.4:91096091-91096110 | None:intergenic | 25.0% |
| ! | AAAATTAAACCTGTTCCAAA+AGG | - | chr3.4:91096643-91096662 | MS.gene37459:intron | 25.0% |
| ! | ATCTATCTATACTCTGAATA+AGG | + | chr3.4:91096585-91096604 | None:intergenic | 25.0% |
| ! | CAAACAAAATTTCCATGAAA+AGG | + | chr3.4:91097885-91097904 | None:intergenic | 25.0% |
| ! | CAGAACTTGAATCAAAAAAT+TGG | + | chr3.4:91096909-91096928 | None:intergenic | 25.0% |
| ! | TAAAAATGGAGAATCCAAAT+TGG | - | chr3.4:91096044-91096063 | MS.gene37459:CDS | 25.0% |
| ! | TATTCAGAGTATAGATAGAT+TGG | - | chr3.4:91096585-91096604 | MS.gene37459:CDS | 25.0% |
| ! | TGTTTCTTTAATCTAGACTA+CGG | - | chr3.4:91098130-91098149 | MS.gene37459:CDS | 25.0% |
| ! | TTTAGTAGTACCTTAAAATG+AGG | + | chr3.4:91097157-91097176 | None:intergenic | 25.0% |
| !! | AGTGTTTTCCTTAATTTCTT+TGG | - | chr3.4:91097479-91097498 | MS.gene37459:CDS | 25.0% |
| !! | GTGTTTTCCTTAATTTCTTT+GGG | - | chr3.4:91097480-91097499 | MS.gene37459:CDS | 25.0% |
| !!! | CAATTTTTTGATTCAAGTTC+TGG | - | chr3.4:91096907-91096926 | MS.gene37459:intron | 25.0% |
| !!! | TCTCTTGAAGAAGAATTTTT+TGG | + | chr3.4:91096121-91096140 | None:intergenic | 25.0% |
| !!! | TTCTTTGTTTAGGTTGTTTT+TGG | - | chr3.4:91096608-91096627 | MS.gene37459:intron | 25.0% |
| !!! | TTGTTGCTTATTTTAAAGGT+TGG | - | chr3.4:91096410-91096429 | MS.gene37459:CDS | 25.0% |
| !!! | TTTTGTTTGAGACATCATTT+TGG | - | chr3.4:91097896-91097915 | MS.gene37459:CDS | 25.0% |
| AAATTCAATGCTATGATCTC+AGG | - | chr3.4:91098512-91098531 | MS.gene37459:CDS | 30.0% | |
| AAGAAATGAAAGAGGAAATC+AGG | - | chr3.4:91098663-91098682 | MS.gene37459:CDS | 30.0% | |
| AATAGAGTGAACGAGTAAAA+TGG | + | chr3.4:91098326-91098345 | None:intergenic | 30.0% | |
| AATTCTTCTTCAAGAGACAA+AGG | - | chr3.4:91096124-91096143 | MS.gene37459:CDS | 30.0% | |
| CATTGAACCCAAAGAAATTA+AGG | + | chr3.4:91097490-91097509 | None:intergenic | 30.0% | |
| TACACAATCTTTGATTAAGG+AGG | - | chr3.4:91096949-91096968 | MS.gene37459:intron | 30.0% | |
| TAGGTTCTATACATTCATCA+AGG | - | chr3.4:91096348-91096367 | MS.gene37459:CDS | 30.0% | |
| TATGTGTATCTCAATTCTCA+AGG | - | chr3.4:91097858-91097877 | MS.gene37459:CDS | 30.0% | |
| TGTTACAGTTGTGCTTATTA+TGG | - | chr3.4:91098207-91098226 | MS.gene37459:CDS | 30.0% | |
| TTTCACATAGCTACAATTCA+TGG | + | chr3.4:91097065-91097084 | None:intergenic | 30.0% | |
| ! | AATGAGGAACAGTTTTCTTA+AGG | + | chr3.4:91097141-91097160 | None:intergenic | 30.0% |
| ! | ACAGTTTTCTTAAGGAAATC+AGG | + | chr3.4:91097133-91097152 | None:intergenic | 30.0% |
| ! | ACTATGAAAGGAAAAGCTTT+TGG | + | chr3.4:91098455-91098474 | None:intergenic | 30.0% |
| ! | AGTTTTCTTAAGGAAATCAG+GGG | + | chr3.4:91097131-91097150 | None:intergenic | 30.0% |
| ! | ATTCATTTTCCTCAATGATG+TGG | - | chr3.4:91097622-91097641 | MS.gene37459:intron | 30.0% |
| ! | ATTGAATTTTGTAACCGACA+TGG | + | chr3.4:91098501-91098520 | None:intergenic | 30.0% |
| ! | CAGTTTTCTTAAGGAAATCA+GGG | + | chr3.4:91097132-91097151 | None:intergenic | 30.0% |
| ! | CTTAATTTCTTTGGGTTCAA+TGG | - | chr3.4:91097488-91097507 | MS.gene37459:CDS | 30.0% |
| ! | CTTTTTCCTTCTTAGAAAGT+TGG | - | chr3.4:91098295-91098314 | MS.gene37459:CDS | 30.0% |
| ! | GAAAACTGTTCCTCATTTTA+AGG | - | chr3.4:91097144-91097163 | MS.gene37459:intron | 30.0% |
| ! | GATAGATTGGTTCTTTGTTT+AGG | - | chr3.4:91096598-91096617 | MS.gene37459:intron | 30.0% |
| ! | GTTGTGCTTATTATGGATTA+TGG | - | chr3.4:91098214-91098233 | MS.gene37459:CDS | 30.0% |
| !!! | GAGGTTGTTGCTTATTTTAA+AGG | - | chr3.4:91096406-91096425 | MS.gene37459:CDS | 30.0% |
| !!! | TGATTGGTTTTATGCTAGAT+GGG | - | chr3.4:91096492-91096511 | MS.gene37459:CDS | 30.0% |
| !!! | TTGATTGGTTTTATGCTAGA+TGG | - | chr3.4:91096491-91096510 | MS.gene37459:CDS | 30.0% |
| AAAACGCTAAACAACTCACA+TGG | - | chr3.4:91096155-91096174 | MS.gene37459:CDS | 35.0% | |
| AAACGCTAAACAACTCACAT+GGG | - | chr3.4:91096156-91096175 | MS.gene37459:CDS | 35.0% | |
| AAATGTGTGAGACGTTGTTA+CGG | - | chr3.4:91097924-91097943 | MS.gene37459:CDS | 35.0% | |
| AACACCAGTGGTTGTAAAAA+TGG | - | chr3.4:91096030-91096049 | MS.gene37459:CDS | 35.0% | |
| AAGATTCAGGTAACTCACAT+TGG | + | chr3.4:91097748-91097767 | None:intergenic | 35.0% | |
| ACAATCTTTGATTAAGGAGG+AGG | - | chr3.4:91096952-91096971 | MS.gene37459:intron | 35.0% | |
| AGATCTTGAATCTGGAGATA+AGG | - | chr3.4:91096678-91096697 | MS.gene37459:intron | 35.0% | |
| AGGATGAGAATCTTCTAACA+AGG | - | chr3.4:91097405-91097424 | MS.gene37459:CDS | 35.0% | |
| AGTTCATCAATGTCCCAATT+TGG | + | chr3.4:91096061-91096080 | None:intergenic | 35.0% | |
| AGTTTGGAGAATAAAGGCTT+TGG | - | chr3.4:91097520-91097539 | MS.gene37459:intron | 35.0% | |
| ATTAAACCTGTTCCAAAAGG+TGG | - | chr3.4:91096646-91096665 | MS.gene37459:intron | 35.0% | |
| CACTGGAAACATTAACAACT+TGG | + | chr3.4:91097725-91097744 | None:intergenic | 35.0% | |
| CCAAAAAGAAAGATACTCCT+TGG | + | chr3.4:91098835-91098854 | None:intergenic | 35.0% | |
| CGTGTAGCTTCAAGAAATTA+TGG | - | chr3.4:91097249-91097268 | MS.gene37459:CDS | 35.0% | |
| CTACAGGATAATGACGAATT+AGG | - | chr3.4:91097350-91097369 | MS.gene37459:CDS | 35.0% | |
| CTTTCTTGCAGATAAGCATA+TGG | - | chr3.4:91098249-91098268 | MS.gene37459:CDS | 35.0% | |
| GAAACTAAACCAAACAATGC+AGG | + | chr3.4:91096232-91096251 | None:intergenic | 35.0% | |
| GAATTGAGATACACATACCT+TGG | + | chr3.4:91097855-91097874 | None:intergenic | 35.0% | |
| GATCTTGAATCTGGAGATAA+GGG | - | chr3.4:91096679-91096698 | MS.gene37459:intron | 35.0% | |
| GATGTTTCAGATCTTGAATC+TGG | - | chr3.4:91096670-91096689 | MS.gene37459:intron | 35.0% | |
| GCATTTGTGAGAAATTGCAA+AGG | + | chr3.4:91096547-91096566 | None:intergenic | 35.0% | |
| GTAGCTTCAAGAAATTATGG+TGG | - | chr3.4:91097252-91097271 | MS.gene37459:CDS | 35.0% | |
| GTGTTCTCAAATAGGAGATA+CGG | + | chr3.4:91098479-91098498 | None:intergenic | 35.0% | |
| GTTCATAAATGGCAAGAAGA+AGG | - | chr3.4:91096974-91096993 | MS.gene37459:intron | 35.0% | |
| TATTGCAGCAGTGTGTAATT+TGG | - | chr3.4:91096871-91096890 | MS.gene37459:intron | 35.0% | |
| TCTTCAAGAGACAAAGGAAA+AGG | - | chr3.4:91096130-91096149 | MS.gene37459:CDS | 35.0% | |
| TCTTTCATTTCTTCCAGATC+AGG | + | chr3.4:91098656-91098675 | None:intergenic | 35.0% | |
| TGATCTGGAAGAAATGAAAG+AGG | - | chr3.4:91098655-91098674 | MS.gene37459:CDS | 35.0% | |
| TGGTAATTTCGATGCATTCA+GGG | + | chr3.4:91097954-91097973 | None:intergenic | 35.0% | |
| TTAAGGAGGAGGTTCATAAA+TGG | - | chr3.4:91096963-91096982 | MS.gene37459:intron | 35.0% | |
| TTATGACATCAGGCAAACAA+AGG | + | chr3.4:91097829-91097848 | None:intergenic | 35.0% | |
| TTGTTTGCCTGATGTCATAA+AGG | - | chr3.4:91097829-91097848 | MS.gene37459:CDS | 35.0% | |
| TTTGTGAGAAATTGCAAAGG+AGG | + | chr3.4:91096544-91096563 | None:intergenic | 35.0% | |
| ! | CAAGGTGTTTCTATGTTTGT+CGG | - | chr3.4:91096366-91096385 | MS.gene37459:CDS | 35.0% |
| ! | GGTGGATGTGTCATATATTT+TGG | - | chr3.4:91097270-91097289 | MS.gene37459:CDS | 35.0% |
| ! | GTATTTGAAGGAACTTGCTT+TGG | - | chr3.4:91098736-91098755 | MS.gene37459:CDS | 35.0% |
| ! | TACTTTTAACAGCTTCAGCA+AGG | - | chr3.4:91098765-91098784 | MS.gene37459:CDS | 35.0% |
| ! | TAGATGGTCTTTTGTGAACA+AGG | - | chr3.4:91097385-91097404 | MS.gene37459:CDS | 35.0% |
| ! | TTGGTAATTTCGATGCATTC+AGG | + | chr3.4:91097955-91097974 | None:intergenic | 35.0% |
| !! | AGAACCTACTTTTCACTGTA+GGG | + | chr3.4:91096336-91096355 | None:intergenic | 35.0% |
| !! | CTTGTTGTTCCACTTCAAAA+TGG | + | chr3.4:91097454-91097473 | None:intergenic | 35.0% |
| !! | GGAGTATCTTTCTTTTTGGT+TGG | - | chr3.4:91098836-91098855 | MS.gene37459:CDS | 35.0% |
| !! | GGTGTTTTTGTTGTGTTTTG+AGG | - | chr3.4:91096387-91096406 | MS.gene37459:CDS | 35.0% |
| !! | GTGTTAGGGATGTTTTTGAT+TGG | - | chr3.4:91096476-91096495 | MS.gene37459:CDS | 35.0% |
| !! | TAGAACCTACTTTTCACTGT+AGG | + | chr3.4:91096337-91096356 | None:intergenic | 35.0% |
| !! | TCTGTGTTTCCATTTTGAAG+TGG | - | chr3.4:91097442-91097461 | MS.gene37459:CDS | 35.0% |
| !! | TTCTACTTCTTGCTATTCCA+AGG | - | chr3.4:91098815-91098834 | MS.gene37459:CDS | 35.0% |
| !! | TTCTCCATTTTTACAACCAC+TGG | + | chr3.4:91096037-91096056 | None:intergenic | 35.0% |
| !! | TTGGTTGGTCTAGACTTAAT+TGG | - | chr3.4:91098851-91098870 | MS.gene37459:CDS | 35.0% |
| !!! | CCAAGGAGTATCTTTCTTTT+TGG | - | chr3.4:91098832-91098851 | MS.gene37459:CDS | 35.0% |
| !!! | GTTAGTTTGTCACGTTGTTT+TGG | - | chr3.4:91098004-91098023 | MS.gene37459:intron | 35.0% |
| ACAACGTGACAAACTAACGA+AGG | + | chr3.4:91098002-91098021 | None:intergenic | 40.0% | |
| ACAGAAAACAGCAGCATAGA+TGG | - | chr3.4:91097777-91097796 | MS.gene37459:CDS | 40.0% | |
| ACATCCCTAACACCAAATGT+CGG | + | chr3.4:91096469-91096488 | None:intergenic | 40.0% | |
| ACCTCTTTCTCATTGCACAT+GGG | + | chr3.4:91096733-91096752 | None:intergenic | 40.0% | |
| AGAACCCTACAGTGAAAAGT+AGG | - | chr3.4:91096329-91096348 | MS.gene37459:CDS | 40.0% | |
| AGATAAGGGTTTCTTCCCTA+TGG | - | chr3.4:91096693-91096712 | MS.gene37459:intron | 40.0% | |
| AGGAGATACGGTACTATGAA+AGG | + | chr3.4:91098467-91098486 | None:intergenic | 40.0% | |
| ATATAACAAACAACCCACGC+AGG | + | chr3.4:91098395-91098414 | None:intergenic | 40.0% | |
| ATGGCACCTTTGTTCAATTG+GGG | - | chr3.4:91095986-91096005 | MS.gene37459:CDS | 40.0% | |
| ATTAGAGATGGGTACAAAGC+TGG | - | chr3.4:91097025-91097044 | MS.gene37459:CDS | 40.0% | |
| CAAAGGCGAAACAATTGCAT+TGG | + | chr3.4:91097812-91097831 | None:intergenic | 40.0% | |
| CAAATTGCTCCTGCATTGTT+TGG | - | chr3.4:91096220-91096239 | MS.gene37459:CDS | 40.0% | |
| CAGCAGTGTGTAATTTGGAT+TGG | - | chr3.4:91096876-91096895 | MS.gene37459:intron | 40.0% | |
| CCTATTTGAGAACACCATGT+CGG | - | chr3.4:91098484-91098503 | MS.gene37459:CDS | 40.0% | |
| CTGTAAGCTTCGTAAGATTC+AGG | + | chr3.4:91097761-91097780 | None:intergenic | 40.0% | |
| GGATCTGAACAAGAACCATA+GGG | + | chr3.4:91096711-91096730 | None:intergenic | 40.0% | |
| GGTGTGAAAGAAAGTCACAA+AGG | - | chr3.4:91096007-91096026 | MS.gene37459:CDS | 40.0% | |
| TACCTCTTTCTCATTGCACA+TGG | + | chr3.4:91096734-91096753 | None:intergenic | 40.0% | |
| TGAGAAATGACATGACTGCT+GGG | + | chr3.4:91098418-91098437 | None:intergenic | 40.0% | |
| TGATTGGATTTGGATCCACT+TGG | - | chr3.4:91097319-91097338 | MS.gene37459:CDS | 40.0% | |
| TGCTCCACATCTTGAATTGT+GGG | - | chr3.4:91096441-91096460 | MS.gene37459:CDS | 40.0% | |
| TGCTGGAGTTTGGAGAATAA+AGG | - | chr3.4:91097514-91097533 | MS.gene37459:intron | 40.0% | |
| TGGGACATTGATGAACTTGA+AGG | - | chr3.4:91096064-91096083 | MS.gene37459:CDS | 40.0% | |
| TGTACCCATCTCTAATCACA+CGG | + | chr3.4:91097021-91097040 | None:intergenic | 40.0% | |
| TTCACACCCCAATTGAACAA+AGG | + | chr3.4:91095995-91096014 | None:intergenic | 40.0% | |
| TTCTTAAGGAAATCAGGGGT+AGG | + | chr3.4:91097127-91097146 | None:intergenic | 40.0% | |
| TTGAGAAATGACATGACTGC+TGG | + | chr3.4:91098419-91098438 | None:intergenic | 40.0% | |
| ! | AATTCTCAAGGCCCTTTTCA+TGG | - | chr3.4:91097870-91097889 | MS.gene37459:CDS | 40.0% |
| ! | AGAAACCAAAGCATCAACGA+GGG | - | chr3.4:91098621-91098640 | MS.gene37459:CDS | 40.0% |
| ! | CATTTTCCTCAATGATGTGG+AGG | - | chr3.4:91097625-91097644 | MS.gene37459:intron | 40.0% |
| ! | GCAACACCAACTTTCTAAGA+AGG | + | chr3.4:91098304-91098323 | None:intergenic | 40.0% |
| !! | ATAAAGGCTTTGGAAGAAGC+TGG | - | chr3.4:91097530-91097549 | MS.gene37459:intron | 40.0% |
| !! | TCTGAAACATCACCACCTTT+TGG | + | chr3.4:91096661-91096680 | None:intergenic | 40.0% |
| !!! | AAAGGAAAAGCTTTTGGAGC+TGG | + | chr3.4:91098449-91098468 | None:intergenic | 40.0% |
| AAGTCACAAAGGAACACCAG+TGG | - | chr3.4:91096018-91096037 | MS.gene37459:CDS | 45.0% | |
| AATGTCCATATCCTCCACAG+TGG | + | chr3.4:91097573-91097592 | None:intergenic | 45.0% | |
| AGAGGAAATCAGGAGACAAG+AGG | - | chr3.4:91098673-91098692 | MS.gene37459:CDS | 45.0% | |
| AGGAGTCTACTTTCAGCTCA+AGG | - | chr3.4:91098785-91098804 | MS.gene37459:CDS | 45.0% | |
| ATCAGGGGTAGGCTGAAAAT+CGG | + | chr3.4:91097116-91097135 | None:intergenic | 45.0% | |
| CAGCAGCTCTATGAGCTTTA+AGG | + | chr3.4:91096189-91096208 | None:intergenic | 45.0% | |
| CATCTCTAATCACACGGTGT+CGG | + | chr3.4:91097015-91097034 | None:intergenic | 45.0% | |
| CCGACATGGTGTTCTCAAAT+AGG | + | chr3.4:91098487-91098506 | None:intergenic | 45.0% | |
| CCTCTTTCTCATTGCACATG+GGG | + | chr3.4:91096732-91096751 | None:intergenic | 45.0% | |
| CTTAAAGCTCATAGAGCTGC+TGG | - | chr3.4:91096187-91096206 | MS.gene37459:CDS | 45.0% | |
| GACACCGTGTGATTAGAGAT+GGG | - | chr3.4:91097014-91097033 | MS.gene37459:intron | 45.0% | |
| GGAGTCTACTTTCAGCTCAA+GGG | - | chr3.4:91098786-91098805 | MS.gene37459:CDS | 45.0% | |
| GGGATCTGAACAAGAACCAT+AGG | + | chr3.4:91096712-91096731 | None:intergenic | 45.0% | |
| GTGCTCCACATCTTGAATTG+TGG | - | chr3.4:91096440-91096459 | MS.gene37459:CDS | 45.0% | |
| TAAGAAGTCCGGTCGTTCAT+CGG | - | chr3.4:91098574-91098593 | MS.gene37459:CDS | 45.0% | |
| TAGGACTTGTGCAAGCTAGA+TGG | - | chr3.4:91097369-91097388 | MS.gene37459:CDS | 45.0% | |
| TCAATGGTACTGCTGGAGTT+TGG | - | chr3.4:91097504-91097523 | MS.gene37459:intron | 45.0% | |
| TCCCATGACAATGTTCGTAC+CGG | - | chr3.4:91098358-91098377 | MS.gene37459:CDS | 45.0% | |
| TCCGGTACGAACATTGTCAT+GGG | + | chr3.4:91098362-91098381 | None:intergenic | 45.0% | |
| TGGGTAGTCACTAAGAAGTC+CGG | - | chr3.4:91098563-91098582 | MS.gene37459:CDS | 45.0% | |
| TTCGAGCTCATCTTCATGGA+TGG | - | chr3.4:91097597-91097616 | MS.gene37459:intron | 45.0% | |
| ! | ACCTTGGCCTTTATGACATC+AGG | + | chr3.4:91097839-91097858 | None:intergenic | 45.0% |
| ! | GAGAAACCAAAGCATCAACG+AGG | - | chr3.4:91098620-91098639 | MS.gene37459:CDS | 45.0% |
| ! | TTTGGGTTCAATGGTACTGC+TGG | - | chr3.4:91097497-91097516 | MS.gene37459:CDS | 45.0% |
| !! | ACGGTGTCGGTACAAAATGT+TGG | + | chr3.4:91097002-91097021 | None:intergenic | 45.0% |
| !!! | ACATCACCACCTTTTGGAAC+AGG | + | chr3.4:91096655-91096674 | None:intergenic | 45.0% |
| !! | ATAATTAATTAATATTTGAT+TGG | - | chr3.4:91097303-91097322 | MS.gene37459:CDS | 5.0% |
| AACAACCCACGCAGGAATCT+CGG | + | chr3.4:91098387-91098406 | None:intergenic | 50.0% | |
| ACGCACTTCCTAGCTGGAAT+AGG | + | chr3.4:91098538-91098557 | None:intergenic | 50.0% | |
| ATCTCAGGCCTATTCCAGCT+AGG | - | chr3.4:91098527-91098546 | MS.gene37459:CDS | 50.0% | |
| ATTCGTACGCACTTCCTAGC+TGG | + | chr3.4:91098544-91098563 | None:intergenic | 50.0% | |
| CAGCAGCATAGATGGCATTC+TGG | - | chr3.4:91097785-91097804 | MS.gene37459:CDS | 50.0% | |
| CAGGTAACTCACATTGGCAC+TGG | + | chr3.4:91097742-91097761 | None:intergenic | 50.0% | |
| CATGACAATGTTCGTACCGG+AGG | - | chr3.4:91098361-91098380 | MS.gene37459:CDS | 50.0% | |
| CCCCATGTGCAATGAGAAAG+AGG | - | chr3.4:91096729-91096748 | MS.gene37459:intron | 50.0% | |
| CCTGTAGCATCATCACCAAG+TGG | + | chr3.4:91097337-91097356 | None:intergenic | 50.0% | |
| CGACACCGTGTGATTAGAGA+TGG | - | chr3.4:91097013-91097032 | MS.gene37459:intron | 50.0% | |
| CTCCGGTACGAACATTGTCA+TGG | + | chr3.4:91098363-91098382 | None:intergenic | 50.0% | |
| GATGACCCTCGTTGATGCTT+TGG | + | chr3.4:91098629-91098648 | None:intergenic | 50.0% | |
| GCAGTACCTCCACATCATTG+AGG | + | chr3.4:91097634-91097653 | None:intergenic | 50.0% | |
| GCCTGATGTCATAAAGGCCA+AGG | - | chr3.4:91097835-91097854 | MS.gene37459:CDS | 50.0% | |
| GCTGTTCGAGCTCATCTTCA+TGG | - | chr3.4:91097593-91097612 | MS.gene37459:intron | 50.0% | |
| GGTGCCCACAATTCAAGATG+TGG | + | chr3.4:91096448-91096467 | None:intergenic | 50.0% | |
| ! | AGCTAGGAAGTGCGTACGAA+TGG | - | chr3.4:91098543-91098562 | MS.gene37459:CDS | 50.0% |
| ! | CTTTGGAAGAAGCTGGTGGT+TGG | - | chr3.4:91097537-91097556 | MS.gene37459:intron | 50.0% |
| ! | GCTAGGAAGTGCGTACGAAT+GGG | - | chr3.4:91098544-91098563 | MS.gene37459:CDS | 50.0% |
| !! | AAGGCTTTGGAAGAAGCTGG+TGG | - | chr3.4:91097533-91097552 | MS.gene37459:intron | 50.0% |
| !! | CCACTTGGTGATGATGCTAC+AGG | - | chr3.4:91097334-91097353 | MS.gene37459:CDS | 50.0% |
| !! | GAATTGTGGGCACCGACATT+TGG | - | chr3.4:91096454-91096473 | MS.gene37459:CDS | 50.0% |
| !! | GGCACCGACATTTGGTGTTA+GGG | - | chr3.4:91096462-91096481 | MS.gene37459:CDS | 50.0% |
| AAGTCCGGTCGTTCATCGGA+GGG | - | chr3.4:91098578-91098597 | MS.gene37459:CDS | 55.0% | |
| AGAACCGACGCGGATATCGA+CGG | - | chr3.4:91096280-91096299 | MS.gene37459:CDS | 55.0% | |
| AGGGTCATCAGCACCTGATC+TGG | - | chr3.4:91098640-91098659 | MS.gene37459:CDS | 55.0% | |
| ATCACCCTCCGATGAACGAC+CGG | + | chr3.4:91098585-91098604 | None:intergenic | 55.0% | |
| GAGGACCACTGTGGAGGATA+TGG | - | chr3.4:91097565-91097584 | MS.gene37459:intron | 55.0% | |
| GGAAGAAGCTGGTGGTTGGT+TGG | - | chr3.4:91097541-91097560 | MS.gene37459:intron | 55.0% | |
| TTGGTTGGAGAGGACCACTG+TGG | - | chr3.4:91097556-91097575 | MS.gene37459:intron | 55.0% | |
| ! | AAGCTGGTGGTTGGTTGGAG+AGG | - | chr3.4:91097546-91097565 | MS.gene37459:intron | 55.0% |
| ! | GATATCGACGGTGGTGTTGG+TGG | - | chr3.4:91096292-91096311 | MS.gene37459:CDS | 55.0% |
| !! | GGGCACCGACATTTGGTGTT+AGG | - | chr3.4:91096461-91096480 | MS.gene37459:CDS | 55.0% |
| ACCACCGTCGATATCCGCGT+CGG | + | chr3.4:91096287-91096306 | None:intergenic | 60.0% | |
| AGAAGCGACGCGGCGTTTGA+CGG | + | chr3.4:91096257-91096276 | None:intergenic | 60.0% | |
| CGCTTCTGGTAGAACCGACG+CGG | - | chr3.4:91096270-91096289 | MS.gene37459:CDS | 60.0% | |
| CGGTTCTACCAGAAGCGACG+CGG | + | chr3.4:91096267-91096286 | None:intergenic | 60.0% | |
| GAAGTCCGGTCGTTCATCGG+AGG | - | chr3.4:91098577-91098596 | MS.gene37459:CDS | 60.0% | |
| GCGGATATCGACGGTGGTGT+TGG | - | chr3.4:91096289-91096308 | MS.gene37459:CDS | 60.0% | |
| GTTGGAGAGGACCACTGTGG+AGG | - | chr3.4:91097559-91097578 | MS.gene37459:intron | 60.0% | |
| !! | ACGGTGGTGTTGGTGGTGGT+AGG | - | chr3.4:91096299-91096318 | MS.gene37459:CDS | 60.0% |
| !! | ATCGACGGTGGTGTTGGTGG+TGG | - | chr3.4:91096295-91096314 | MS.gene37459:CDS | 60.0% |
| !! | CGGTGGTGTTGGTGGTGGTA+GGG | - | chr3.4:91096300-91096319 | MS.gene37459:CDS | 60.0% |
| ACCGACGCGGATATCGACGG+TGG | - | chr3.4:91096283-91096302 | MS.gene37459:CDS | 65.0% | |
| CACGCAGGAATCTCGGCCTC+CGG | + | chr3.4:91098380-91098399 | None:intergenic | 65.0% | |
| GGAGGCCGAGATTCCTGCGT+GGG | - | chr3.4:91098379-91098398 | MS.gene37459:CDS | 65.0% | |
| GTCAAACGCCGCGTCGCTTC+TGG | - | chr3.4:91096256-91096275 | MS.gene37459:CDS | 65.0% | |
| AGCGACGCGGCGTTTGACGG+CGG | + | chr3.4:91096254-91096273 | None:intergenic | 70.0% | |
| CGGAGGCCGAGATTCCTGCG+TGG | - | chr3.4:91098378-91098397 | MS.gene37459:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 91095986 | 91098889 | 91095986 | ID=MS.gene37459 |
| chr3.4 | mRNA | 91095986 | 91098889 | 91095986 | ID=MS.gene37459.t1;Parent=MS.gene37459 |
| chr3.4 | exon | 91098125 | 91098889 | 91098125 | ID=MS.gene37459.t1.exon1;Parent=MS.gene37459.t1 |
| chr3.4 | CDS | 91098125 | 91098889 | 91098125 | ID=cds.MS.gene37459.t1;Parent=MS.gene37459.t1 |
| chr3.4 | exon | 91097710 | 91098018 | 91097710 | ID=MS.gene37459.t1.exon2;Parent=MS.gene37459.t1 |
| chr3.4 | CDS | 91097710 | 91098018 | 91097710 | ID=cds.MS.gene37459.t1;Parent=MS.gene37459.t1 |
| chr3.4 | exon | 91097229 | 91097519 | 91097229 | ID=MS.gene37459.t1.exon3;Parent=MS.gene37459.t1 |
| chr3.4 | CDS | 91097229 | 91097519 | 91097229 | ID=cds.MS.gene37459.t1;Parent=MS.gene37459.t1 |
| chr3.4 | exon | 91097019 | 91097132 | 91097019 | ID=MS.gene37459.t1.exon4;Parent=MS.gene37459.t1 |
| chr3.4 | CDS | 91097019 | 91097132 | 91097019 | ID=cds.MS.gene37459.t1;Parent=MS.gene37459.t1 |
| chr3.4 | exon | 91095986 | 91096615 | 91095986 | ID=MS.gene37459.t1.exon5;Parent=MS.gene37459.t1 |
| chr3.4 | CDS | 91095986 | 91096615 | 91095986 | ID=cds.MS.gene37459.t1;Parent=MS.gene37459.t1 |
| Gene Sequence |
| Protein sequence |
