AlfalfaGEDB | MS.gene38102

M. sativa cultivar XinJiangDaYe / MS.gene38102

KEGG: -
GO: -
PFAM: PF02469.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38102.t1	XP_003618017.1	95.1	263	11	2	1	262	1	262	7.90E-94	353.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38102.t1	Q9SJ81	69.7	152	46	0	50	201	48	199	1.5e-56	221.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38102.t1	G7K503	95.1	263	11	2	1	262	1	262	5.7e-94	353.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049298	MS.gene38102	0.849283	3.57E-60	-1.69E-46
MS.gene050133	MS.gene38102	0.824598	7.40E-54	-1.69E-46
MS.gene050315	MS.gene38102	-0.800012	1.76E-48	-1.69E-46
MS.gene050710	MS.gene38102	0.842077	3.22E-58	-1.69E-46
MS.gene050874	MS.gene38102	0.834582	2.76E-56	-1.69E-46
MS.gene050875	MS.gene38102	0.841904	3.58E-58	-1.69E-46
MS.gene051439	MS.gene38102	0.801498	8.75E-49	-1.69E-46
MS.gene051552	MS.gene38102	0.857233	1.88E-62	-1.69E-46
MS.gene051838	MS.gene38102	-0.818633	1.77E-52	-1.69E-46
MS.gene051914	MS.gene38102	0.834463	2.95E-56	-1.69E-46
MS.gene052469	MS.gene38102	-0.828467	8.85E-55	-1.69E-46
MS.gene053108	MS.gene38102	0.801743	7.80E-49	-1.69E-46
MS.gene054633	MS.gene38102	0.832128	1.13E-55	-1.69E-46
MS.gene054850	MS.gene38102	0.825335	4.96E-54	-1.69E-46
MS.gene054941	MS.gene38102	0.846802	1.73E-59	-1.69E-46
MS.gene055566	MS.gene38102	0.805817	1.11E-49	-1.69E-46
MS.gene05652	MS.gene38102	0.893272	7.34E-75	-1.69E-46
MS.gene056633	MS.gene38102	-0.810136	1.34E-50	-1.69E-46
MS.gene056678	MS.gene38102	0.821939	3.09E-53	-1.69E-46
MS.gene056688	MS.gene38102	0.81912	1.37E-52	-1.69E-46
MS.gene057356	MS.gene38102	0.836825	7.46E-57	-1.69E-46
MS.gene057669	MS.gene38102	0.844298	8.24E-59	-1.69E-46
MS.gene057717	MS.gene38102	0.832446	9.41E-56	-1.69E-46
MS.gene058128	MS.gene38102	0.840627	7.76E-58	-1.69E-46
MS.gene058418	MS.gene38102	0.861051	1.35E-63	-1.69E-46
MS.gene058789	MS.gene38102	0.815258	1.01E-51	-1.69E-46
MS.gene058853	MS.gene38102	0.813593	2.37E-51	-1.69E-46
MS.gene05926	MS.gene38102	0.852191	5.43E-61	-1.69E-46
MS.gene05960	MS.gene38102	0.824142	9.47E-54	-1.69E-46
MS.gene059616	MS.gene38102	0.836647	8.28E-57	-1.69E-46
MS.gene059717	MS.gene38102	-0.827217	1.77E-54	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38102.t1	MTR_5g098060	95.817	263	9	2	1	262	1	262	2.14e-176	486
MS.gene38102.t1	MTR_7g101080	40.237	169	90	4	33	195	26	189	1.45e-32	120
MS.gene38102.t1	MTR_2g090765	33.043	230	151	3	31	259	22	249	3.86e-27	105
MS.gene38102.t1	MTR_4g059720	35.789	190	111	4	8	194	8	189	8.27e-25	99.4
MS.gene38102.t1	MTR_4g059840	32.787	244	146	8	28	261	55	290	7.85e-23	95.1
MS.gene38102.t1	MTR_2g093990	36.667	150	90	2	48	194	41	188	3.87e-21	89.7
MS.gene38102.t1	MTR_4g059790	32.174	230	138	8	28	247	55	276	5.01e-21	90.1
MS.gene38102.t1	MTR_4g053380	29.796	245	152	7	28	262	59	293	6.80e-21	89.7
MS.gene38102.t1	MTR_7g075453	33.714	175	110	4	47	219	183	353	4.81e-20	89.0
MS.gene38102.t1	MTR_8g087470	32.086	187	106	5	22	190	56	239	6.60e-19	84.7
MS.gene38102.t1	MTR_2g017960	29.381	194	128	4	48	237	68	256	2.37e-18	82.8
MS.gene38102.t1	MTR_8g087460	31.551	187	107	5	22	190	56	239	2.39e-18	83.2
MS.gene38102.t1	MTR_2g017950	28.829	222	124	7	1	190	2	221	2.78e-18	82.8
MS.gene38102.t1	MTR_2g017970	30.244	205	129	5	48	243	68	267	2.79e-18	82.4
MS.gene38102.t1	MTR_8g087450	31.098	164	104	4	31	190	63	221	1.19e-17	80.9
MS.gene38102.t1	MTR_2g437700	34.395	157	96	3	46	197	193	347	1.71e-17	81.6
MS.gene38102.t1	MTR_2g093980	32.961	179	111	5	23	196	45	219	9.75e-17	78.2
MS.gene38102.t1	MTR_4g059780	29.843	191	112	4	26	196	52	240	5.63e-16	76.3
MS.gene38102.t1	MTR_2g093970	28.502	207	121	5	9	190	9	213	1.81e-15	74.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38102.t1	AT2G04780	65.079	189	66	0	47	235	45	233	2.30e-77	235
MS.gene38102.t1	AT2G04780	65.079	189	66	0	47	235	45	233	2.30e-77	235
MS.gene38102.t1	AT5G44130	34.359	195	120	4	47	237	35	225	1.19e-31	117
MS.gene38102.t1	AT2G20520	36.444	225	125	6	16	224	1	223	4.22e-31	116
MS.gene38102.t1	AT1G03870	33.333	219	130	6	47	262	38	243	5.55e-31	115
MS.gene38102.t1	AT5G03170	36.842	171	104	3	37	204	26	195	1.02e-28	109
MS.gene38102.t1	AT5G60490	34.054	185	109	2	48	230	39	212	1.01e-22	94.0
MS.gene38102.t1	AT3G46550	34.694	196	113	7	22	211	187	373	2.92e-21	92.4
MS.gene38102.t1	AT3G60900	34.659	176	105	5	39	208	180	351	1.48e-18	84.7
MS.gene38102.t1	AT2G45470	32.889	225	133	5	29	240	170	389	1.31e-16	79.3

Find 65 sgRNAs with CRISPR-Local

Find 78 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAGTGTTGTTTGCTTGGTTT+TGG	0.201552	5.1:-78375071	None:intergenic
AGATCGTCAGCTATGGAATT+TGG	0.201670	5.1:+78375565	MS.gene38102:CDS
AACCTTGTGTTGGCAACTTT+TGG	0.243612	5.1:+78375591	MS.gene38102:CDS
CCTTCAATCCACAAAAGTTT+TGG	0.254005	5.1:+78375041	MS.gene38102:CDS
TCAGCTGCAGGCGCAATTTC+AGG	0.267157	5.1:-78375468	None:intergenic
CTTCTTCAGTGTTGTTTGCT+TGG	0.268289	5.1:-78375077	None:intergenic
AGAGGGTGGACTTACGGTTT+TGG	0.270515	5.1:-78374911	None:intergenic
GATGCGAAGGAACTGTCTTT+TGG	0.299960	5.1:-78375117	None:intergenic
CTCCCAGCACTTTGGTCAGC+TGG	0.303486	5.1:-78375495	None:intergenic
GATCGTCAGCTATGGAATTT+GGG	0.308948	5.1:+78375566	MS.gene38102:CDS
GGAACTGTCAAAATTAATTC+AGG	0.309797	5.1:+78375312	MS.gene38102:CDS
CACTGATATTCCTCCTGTTC+CGG	0.318299	5.1:+78375431	MS.gene38102:CDS
GGAGCCGGAGTTGGACTCTC+GGG	0.338226	5.1:-78374937	None:intergenic
TTGAATTTCACCGATAATTC+CGG	0.349314	5.1:+78375291	MS.gene38102:CDS
AATCTCATCAGCTTTGAGTT+TGG	0.359351	5.1:-78375160	None:intergenic
TTTGACAGTTCCGGAATTAT+CGG	0.367204	5.1:-78375301	None:intergenic
GCCTCAACTCCTACATTTGC+CGG	0.376027	5.1:+78375255	MS.gene38102:CDS
GTGGGTGCAGGAGCCGGAAC+AGG	0.376931	5.1:-78375444	None:intergenic
TCAGTGAGGTTAACAAAATC+TGG	0.394471	5.1:-78374976	None:intergenic
TGCAATTTATCAAGTTGATA+AGG	0.410347	5.1:+78375383	MS.gene38102:CDS
TCAACTTGATAAATTGCAAC+AGG	0.410462	5.1:-78375378	None:intergenic
ACTGAATTACTCACCGTTGC+TGG	0.419071	5.1:+78374994	MS.gene38102:CDS
ATGTAGGAGTTGAGGCAGTT+TGG	0.424006	5.1:-78375248	None:intergenic
TGGAGCCGGAGTTGGACTCT+CGG	0.431321	5.1:-78374938	None:intergenic
TTGTAAGAAGACGAACTATC+TGG	0.433149	5.1:-78375543	None:intergenic
GCTGGTGCTGGAGCCGGAGT+TGG	0.434583	5.1:-78374946	None:intergenic
TATTGAAGAAAAGTGTGAAA+TGG	0.451994	5.1:-78375018	None:intergenic
GTAGGTGCTGGTGCTGGAGC+CGG	0.452561	5.1:-78374952	None:intergenic
TCAGGTGTGGGTGCAGGAGC+CGG	0.468971	5.1:-78375450	None:intergenic
TCTCCAGCTGACCAAAGTGC+TGG	0.473142	5.1:+78375492	MS.gene38102:CDS
GCAATTTCAGGTGTGGGTGC+AGG	0.479601	5.1:-78375456	None:intergenic
GAGCCGGAGTTGGACTCTCG+GGG	0.491727	5.1:-78374936	None:intergenic
TGCAGGCGCAATTTCAGGTG+TGG	0.492103	5.1:-78375463	None:intergenic
CAAGCAAACAACACTGAAGA+AGG	0.495908	5.1:+78375078	MS.gene38102:CDS
AATGTGGCAAAGCATGGAAA+AGG	0.503046	5.1:-78375194	None:intergenic
ACGATTTGCTCCCAGCACTT+TGG	0.511706	5.1:-78375503	None:intergenic
GAGTTGAGGCAGTTTGGCTA+AGG	0.512356	5.1:-78375242	None:intergenic
GCAGGCGCAATTTCAGGTGT+GGG	0.518557	5.1:-78375462	None:intergenic
TCTGGTGTAGGTGCTGGTGC+TGG	0.520921	5.1:-78374958	None:intergenic
TCAGCTGGAGAATCAGCTGC+AGG	0.533442	5.1:-78375480	None:intergenic
TCTTACAAGATCGTCAGCTA+TGG	0.536563	5.1:+78375558	MS.gene38102:CDS
CTCCAGCTGACCAAAGTGCT+GGG	0.544197	5.1:+78375493	MS.gene38102:CDS
AATAGAAATGTGGCAAAGCA+TGG	0.549806	5.1:-78375200	None:intergenic
TTCAGGATGGTCAATCACTA+AGG	0.555642	5.1:+78375329	MS.gene38102:CDS
GGTGCAGGAGCCGGAACAGG+AGG	0.561308	5.1:-78375441	None:intergenic
AGGTTAACAAAATCTGGTGT+AGG	0.563929	5.1:-78374970	None:intergenic
TAATCACCACCGGCAAATGT+AGG	0.566308	5.1:-78375264	None:intergenic
GCTTTGAGTTTGGATAAAGA+AGG	0.566467	5.1:-78375150	None:intergenic
ACAAAATCTGGTGTAGGTGC+TGG	0.568282	5.1:-78374964	None:intergenic
GAACTATCTGGTGAAGATGA+AGG	0.574002	5.1:-78375531	None:intergenic
TCTGCTGCTTCTGAGCTCAT+CGG	0.586497	5.1:+78374882	MS.gene38102:CDS
AACCAAAAGTTGCCAACACA+AGG	0.587265	5.1:-78375593	None:intergenic
AGGTTTCTTCAATGATGCGA+AGG	0.588628	5.1:-78375130	None:intergenic
CTGTCAAAATTAATTCAGGA+TGG	0.599822	5.1:+78375316	MS.gene38102:CDS
GCCGGAGTTGGACTCTCGGG+GGG	0.600157	5.1:-78374934	None:intergenic
AGTGTGAAATGGACCAGCAA+CGG	0.600472	5.1:-78375007	None:intergenic
ACCGGCAAATGTAGGAGTTG+AGG	0.606038	5.1:-78375256	None:intergenic
ATTCAAAGTGTAATCACCAC+CGG	0.611570	5.1:-78375274	None:intergenic
ATAAATTGCAACAGGATCAG+TGG	0.614239	5.1:-78375370	None:intergenic
AGCCGGAGTTGGACTCTCGG+GGG	0.617688	5.1:-78374935	None:intergenic
AATTTGGGGCAACCTTGTGT+TGG	0.628436	5.1:+78375581	MS.gene38102:CDS
ATCGTCAGCTATGGAATTTG+GGG	0.659891	5.1:+78375567	MS.gene38102:CDS
TCAGCTAGTGAATAGAAATG+TGG	0.662953	5.1:-78375210	None:intergenic
TCAACTCCTACATTTGCCGG+TGG	0.674619	5.1:+78375258	MS.gene38102:CDS
CAACGGTGAGTAATTCAGTG+AGG	0.749189	5.1:-78374990	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATTGAAGAAAAGTGTGAAA+TGG	-	chr5.1:78375021-78375040	None:intergenic	25.0%
!!!	TGAATTAATTTTGACAGTTC+CGG	-	chr5.1:78375313-78375332	None:intergenic	25.0%
!!!	TGCAATTTATCAAGTTGATA+AGG	+	chr5.1:78375383-78375402	MS.gene38102:CDS	25.0%
	CTGTCAAAATTAATTCAGGA+TGG	+	chr5.1:78375316-78375335	MS.gene38102:CDS	30.0%
	GGAACTGTCAAAATTAATTC+AGG	+	chr5.1:78375312-78375331	MS.gene38102:CDS	30.0%
	TCAACTTGATAAATTGCAAC+AGG	-	chr5.1:78375381-78375400	None:intergenic	30.0%
	TTGAATTTCACCGATAATTC+CGG	+	chr5.1:78375291-78375310	MS.gene38102:CDS	30.0%
	AATAGAAATGTGGCAAAGCA+TGG	-	chr5.1:78375203-78375222	None:intergenic	35.0%
	AGGTTAACAAAATCTGGTGT+AGG	-	chr5.1:78374973-78374992	None:intergenic	35.0%
	ATAAATTGCAACAGGATCAG+TGG	-	chr5.1:78375373-78375392	None:intergenic	35.0%
	ATTCAAAGTGTAATCACCAC+CGG	-	chr5.1:78375277-78375296	None:intergenic	35.0%
	TCAGCTAGTGAATAGAAATG+TGG	-	chr5.1:78375213-78375232	None:intergenic	35.0%
	TCAGTGAGGTTAACAAAATC+TGG	-	chr5.1:78374979-78374998	None:intergenic	35.0%
	TTGTAAGAAGACGAACTATC+TGG	-	chr5.1:78375546-78375565	None:intergenic	35.0%
	TTTGACAGTTCCGGAATTAT+CGG	-	chr5.1:78375304-78375323	None:intergenic	35.0%
!	CCTTCAATCCACAAAAGTTT+TGG	+	chr5.1:78375041-78375060	MS.gene38102:CDS	35.0%
!	GCTTTGAGTTTGGATAAAGA+AGG	-	chr5.1:78375153-78375172	None:intergenic	35.0%
!!	AATCTCATCAGCTTTGAGTT+TGG	-	chr5.1:78375163-78375182	None:intergenic	35.0%
!!	CCAAAACTTTTGTGGATTGA+AGG	-	chr5.1:78375044-78375063	None:intergenic	35.0%
	AACCAAAAGTTGCCAACACA+AGG	-	chr5.1:78375596-78375615	None:intergenic	40.0%
	AATGTGGCAAAGCATGGAAA+AGG	-	chr5.1:78375197-78375216	None:intergenic	40.0%
	AGATCGTCAGCTATGGAATT+TGG	+	chr5.1:78375565-78375584	MS.gene38102:CDS	40.0%
	AGGTTTCTTCAATGATGCGA+AGG	-	chr5.1:78375133-78375152	None:intergenic	40.0%
	ATCGTCAGCTATGGAATTTG+GGG	+	chr5.1:78375567-78375586	MS.gene38102:CDS	40.0%
	CAAGCAAACAACACTGAAGA+AGG	+	chr5.1:78375078-78375097	MS.gene38102:CDS	40.0%
	GAACTATCTGGTGAAGATGA+AGG	-	chr5.1:78375534-78375553	None:intergenic	40.0%
	GATCGTCAGCTATGGAATTT+GGG	+	chr5.1:78375566-78375585	MS.gene38102:CDS	40.0%
	TCTTACAAGATCGTCAGCTA+TGG	+	chr5.1:78375558-78375577	MS.gene38102:CDS	40.0%
	TTCAGGATGGTCAATCACTA+AGG	+	chr5.1:78375329-78375348	MS.gene38102:CDS	40.0%
!	GAACGTGTCCAAAACTTTTG+TGG	-	chr5.1:78375052-78375071	None:intergenic	40.0%
!	TGATAAGGTTTTGCTTCCTG+AGG	+	chr5.1:78375398-78375417	MS.gene38102:CDS	40.0%
!!	AACCTTGTGTTGGCAACTTT+TGG	+	chr5.1:78375591-78375610	MS.gene38102:CDS	40.0%
!!	CTTCTTCAGTGTTGTTTGCT+TGG	-	chr5.1:78375080-78375099	None:intergenic	40.0%
!!	TTGCTTCCTGAGGCTATTTT+TGG	+	chr5.1:78375408-78375427	MS.gene38102:CDS	40.0%
!!!	CAGTGTTGTTTGCTTGGTTT+TGG	-	chr5.1:78375074-78375093	None:intergenic	40.0%
!!!	GTTGGCAACTTTTGGTTTGT+TGG	+	chr5.1:78375599-78375618	MS.gene38102:CDS	40.0%
	ACAAAATCTGGTGTAGGTGC+TGG	-	chr5.1:78374967-78374986	None:intergenic	45.0%
	ACTGAATTACTCACCGTTGC+TGG	+	chr5.1:78374994-78375013	MS.gene38102:CDS	45.0%
	AGTGTGAAATGGACCAGCAA+CGG	-	chr5.1:78375010-78375029	None:intergenic	45.0%
	ATGTAGGAGTTGAGGCAGTT+TGG	-	chr5.1:78375251-78375270	None:intergenic	45.0%
	CAACGGTGAGTAATTCAGTG+AGG	-	chr5.1:78374993-78375012	None:intergenic	45.0%
	CACTGATATTCCTCCTGTTC+CGG	+	chr5.1:78375431-78375450	MS.gene38102:CDS	45.0%
	TAATCACCACCGGCAAATGT+AGG	-	chr5.1:78375267-78375286	None:intergenic	45.0%
	TCAGTGCCAAAAATAGCCTC+AGG	-	chr5.1:78375417-78375436	None:intergenic	45.0%
!	AATTTGGGGCAACCTTGTGT+TGG	+	chr5.1:78375581-78375600	MS.gene38102:CDS	45.0%
!	GATGCGAAGGAACTGTCTTT+TGG	-	chr5.1:78375120-78375139	None:intergenic	45.0%
!!!	GGCAACTTTTGGTTTGTTGG+TGG	+	chr5.1:78375602-78375621	MS.gene38102:CDS	45.0%
	ACCGGCAAATGTAGGAGTTG+AGG	-	chr5.1:78375259-78375278	None:intergenic	50.0%
	GAGTTGAGGCAGTTTGGCTA+AGG	-	chr5.1:78375245-78375264	None:intergenic	50.0%
	GCCTCAACTCCTACATTTGC+CGG	+	chr5.1:78375255-78375274	MS.gene38102:CDS	50.0%
	TCAACTCCTACATTTGCCGG+TGG	+	chr5.1:78375258-78375277	MS.gene38102:CDS	50.0%
!	ACGATTTGCTCCCAGCACTT+TGG	-	chr5.1:78375506-78375525	None:intergenic	50.0%
!	TCTGCTGCTTCTGAGCTCAT+CGG	+	chr5.1:78374882-78374901	MS.gene38102:CDS	50.0%
!!	AGAGGGTGGACTTACGGTTT+TGG	-	chr5.1:78374914-78374933	None:intergenic	50.0%
	TCAGCTGCAGGCGCAATTTC+AGG	-	chr5.1:78375471-78375490	None:intergenic	55.0%
	TCAGCTGGAGAATCAGCTGC+AGG	-	chr5.1:78375483-78375502	None:intergenic	55.0%
	TCTCCAGCTGACCAAAGTGC+TGG	+	chr5.1:78375492-78375511	MS.gene38102:CDS	55.0%
!	CTCCAGCTGACCAAAGTGCT+GGG	+	chr5.1:78375493-78375512	MS.gene38102:CDS	55.0%
!	GCAATTTCAGGTGTGGGTGC+AGG	-	chr5.1:78375459-78375478	None:intergenic	55.0%
!	GCAGGCGCAATTTCAGGTGT+GGG	-	chr5.1:78375465-78375484	None:intergenic	55.0%
!	TGCAGGCGCAATTTCAGGTG+TGG	-	chr5.1:78375466-78375485	None:intergenic	55.0%
	CTCCCAGCACTTTGGTCAGC+TGG	-	chr5.1:78375498-78375517	None:intergenic	60.0%
	TGGAGCCGGAGTTGGACTCT+CGG	-	chr5.1:78374941-78374960	None:intergenic	60.0%
!!	TCTGGTGTAGGTGCTGGTGC+TGG	-	chr5.1:78374961-78374980	None:intergenic	60.0%
	AGCCGGAGTTGGACTCTCGG+GGG	-	chr5.1:78374938-78374957	None:intergenic	65.0%
	AGTTGGACTCTCGGGGGGAG+AGG	-	chr5.1:78374932-78374951	None:intergenic	65.0%
	GAGCCGGAGTTGGACTCTCG+GGG	-	chr5.1:78374939-78374958	None:intergenic	65.0%
	GGAGCCGGAGTTGGACTCTC+GGG	-	chr5.1:78374940-78374959	None:intergenic	65.0%
	GTTGGACTCTCGGGGGGAGA+GGG	-	chr5.1:78374931-78374950	None:intergenic	65.0%
	TCAGGTGTGGGTGCAGGAGC+CGG	-	chr5.1:78375453-78375472	None:intergenic	65.0%
	TCCCCCCGAGAGTCCAACTC+CGG	+	chr5.1:78374933-78374952	MS.gene38102:CDS	65.0%
!	GGGGGGAGAGGGTGGACTTA+CGG	-	chr5.1:78374920-78374939	None:intergenic	65.0%
!!	GTAGGTGCTGGTGCTGGAGC+CGG	-	chr5.1:78374955-78374974	None:intergenic	65.0%
	GCCGGAGTTGGACTCTCGGG+GGG	-	chr5.1:78374937-78374956	None:intergenic	70.0%
	GGTGCAGGAGCCGGAACAGG+AGG	-	chr5.1:78375444-78375463	None:intergenic	70.0%
	GTGGGTGCAGGAGCCGGAAC+AGG	-	chr5.1:78375447-78375466	None:intergenic	70.0%
!	GCTGGTGCTGGAGCCGGAGT+TGG	-	chr5.1:78374949-78374968	None:intergenic	70.0%
	GGACTCTCGGGGGGAGAGGG+TGG	-	chr5.1:78374928-78374947	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	78374847	78375635	78374847	ID=MS.gene38102
chr5.1	mRNA	78374847	78375635	78374847	ID=MS.gene38102.t1;Parent=MS.gene38102
chr5.1	exon	78374847	78375635	78374847	ID=MS.gene38102.t1.exon1;Parent=MS.gene38102.t1
chr5.1	CDS	78374847	78375635	78374847	ID=cds.MS.gene38102.t1;Parent=MS.gene38102.t1

Gene Sequence

>MS.gene38102

ATGAAGGTTTCATTGATTTTTCTTGTGAGCTGCACTCTGCTGCTTCTGAGCTCATCGGCATTTGCCAAAACCGTAAGTCCACCCTCTCCCCCCGAGAGTCCAACTCCGGCTCCAGCACCAGCACCTACACCAGATTTTGTTAACCTCACTGAATTACTCACCGTTGCTGGTCCATTTCACACTTTTCTTCAATACCTTCAATCCACAAAAGTTTTGGACACGTTCCAAAACCAAGCAAACAACACTGAAGAAGGAATCACTATCTTTGTTCCAAAAGACAGTTCCTTCGCATCATTGAAGAAACCTTCTTTATCCAAACTCAAAGCTGATGAGATTAAACAAGTGATCCTTTTCCATGCTTTGCCACATTTCTATTCACTAGCTGATTTCAAAAACCTTAGCCAAACTGCCTCAACTCCTACATTTGCCGGTGGTGATTACACTTTGAATTTCACCGATAATTCCGGAACTGTCAAAATTAATTCAGGATGGTCAATCACTAAGGTGACTAGTGCAGTTCATGCCACTGATCCTGTTGCAATTTATCAAGTTGATAAGGTTTTGCTTCCTGAGGCTATTTTTGGCACTGATATTCCTCCTGTTCCGGCTCCTGCACCCACACCTGAAATTGCGCCTGCAGCTGATTCTCCAGCTGACCAAAGTGCTGGGAGCAAATCGTCTTCACCTTCATCTTCACCAGATAGTTCGTCTTCTTACAAGATCGTCAGCTATGGAATTTGGGGCAACCTTGTGTTGGCAACTTTTGGTTTGTTGGTGGTACTCTTGTGA

Protein sequence

>MS.gene38102.t1

MKVSLIFLVSCTLLLLSSSAFAKTVSPPSPPESPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKADEIKQVILFHALPHFYSLADFKNLSQTASTPTFAGGDYTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVPAPAPTPEIAPAADSPADQSAGSKSSSPSSSPDSSSSYKIVSYGIWGNLVLATFGLLVVLL