Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38399.t1 | XP_013461062.1 | 76.1 | 620 | 145 | 3 | 1 | 619 | 1 | 618 | 1.20E-265 | 925.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38399.t1 | Q9SU72 | 37.1 | 645 | 331 | 12 | 10 | 615 | 6 | 614 | 5.3e-105 | 383.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38399.t1 | A0A072V056 | 76.1 | 620 | 145 | 3 | 1 | 619 | 1 | 618 | 8.6e-266 | 925.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38399 | MS.gene044112 | PPI |
| MS.gene38414 | MS.gene38399 | PPI |
| MS.gene38392 | MS.gene38399 | PPI |
| MS.gene38399 | MS.gene022252 | PPI |
| MS.gene38404 | MS.gene38399 | PPI |
| MS.gene38399 | MS.gene38408 | PPI |
| MS.gene38399 | MS.gene062716 | PPI |
| MS.gene38399 | MS.gene25909 | PPI |
| MS.gene25879 | MS.gene38399 | PPI |
| MS.gene38399 | MS.gene24315 | PPI |
| MS.gene38399 | MS.gene69123 | PPI |
| MS.gene38399 | MS.gene014545 | PPI |
| MS.gene38399 | MS.gene022225 | PPI |
| MS.gene38399 | MS.gene26931 | PPI |
| MS.gene38399 | MS.gene27345 | PPI |
| MS.gene38399 | MS.gene074397 | PPI |
| MS.gene38399 | MS.gene70582 | PPI |
| MS.gene42360 | MS.gene38399 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38399.t1 | MTR_3g078633 | 78.548 | 620 | 130 | 3 | 1 | 619 | 1 | 618 | 0.0 | 1003 |
| MS.gene38399.t1 | MTR_3g078633 | 78.516 | 512 | 108 | 2 | 109 | 619 | 36 | 546 | 0.0 | 835 |
| MS.gene38399.t1 | MTR_3g079340 | 53.291 | 623 | 261 | 12 | 11 | 619 | 10 | 616 | 0.0 | 623 |
| MS.gene38399.t1 | MTR_3g081450 | 81.818 | 99 | 18 | 0 | 508 | 606 | 32 | 130 | 2.03e-52 | 178 |
| MS.gene38399.t1 | MTR_8g494200 | 25.841 | 565 | 338 | 21 | 77 | 603 | 86 | 607 | 7.84e-45 | 169 |
| MS.gene38399.t1 | MTR_3g467360 | 25.915 | 355 | 207 | 13 | 278 | 600 | 209 | 539 | 1.37e-23 | 105 |
| MS.gene38399.t1 | MTR_3g467360 | 25.915 | 355 | 207 | 13 | 278 | 600 | 215 | 545 | 1.40e-23 | 105 |
| MS.gene38399.t1 | MTR_6g007985 | 25.140 | 358 | 213 | 14 | 280 | 605 | 136 | 470 | 7.99e-22 | 99.8 |
| MS.gene38399.t1 | MTR_6g008015 | 25.000 | 360 | 211 | 15 | 280 | 605 | 213 | 547 | 8.77e-22 | 100 |
| MS.gene38399.t1 | MTR_0095s0020 | 25.882 | 340 | 194 | 14 | 122 | 443 | 155 | 454 | 1.62e-21 | 99.4 |
| MS.gene38399.t1 | MTR_6g008055 | 26.039 | 361 | 195 | 16 | 280 | 601 | 213 | 540 | 1.70e-19 | 92.8 |
| MS.gene38399.t1 | MTR_6g007975 | 25.634 | 355 | 206 | 14 | 280 | 601 | 213 | 542 | 2.43e-19 | 92.4 |
| MS.gene38399.t1 | MTR_6g007980 | 24.650 | 357 | 209 | 13 | 278 | 600 | 209 | 539 | 1.73e-17 | 86.7 |
| MS.gene38399.t1 | MTR_6g007980 | 24.860 | 358 | 208 | 13 | 278 | 600 | 209 | 540 | 2.02e-17 | 86.3 |
| MS.gene38399.t1 | MTR_6g007980 | 24.791 | 359 | 208 | 13 | 278 | 600 | 209 | 541 | 2.11e-17 | 86.3 |
| MS.gene38399.t1 | MTR_8g011610 | 35.632 | 87 | 53 | 1 | 117 | 200 | 225 | 311 | 6.06e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38399.t1 | AT3G48090 | 38.640 | 647 | 322 | 12 | 10 | 617 | 6 | 616 | 1.19e-140 | 423 |
| MS.gene38399.t1 | AT3G48080 | 37.855 | 634 | 331 | 14 | 10 | 608 | 6 | 611 | 6.87e-136 | 411 |
| MS.gene38399.t1 | AT3G48090 | 40.672 | 536 | 254 | 9 | 117 | 617 | 2 | 508 | 2.46e-125 | 380 |
| MS.gene38399.t1 | AT3G52430 | 25.407 | 307 | 180 | 10 | 270 | 552 | 175 | 456 | 4.50e-22 | 100 |
| MS.gene38399.t1 | AT5G14930 | 29.412 | 221 | 125 | 8 | 407 | 601 | 293 | 508 | 6.41e-17 | 84.7 |
Find 136 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAATCTCTTGGAATCTT+TGG | 0.121768 | 3.4:-64084398 | None:intergenic |
| CCAAAGATTCCAAGAGATTT+TGG | 0.122201 | 3.4:+64084398 | MS.gene38399:CDS |
| AAATAGATTAAGATCTATTT+TGG | 0.185777 | 3.4:-64084319 | None:intergenic |
| AATATGTGATTTCCAATTAA+AGG | 0.214012 | 3.4:-64085409 | None:intergenic |
| TGGATTCCGCCATGAGATTT+TGG | 0.223602 | 3.4:-64085361 | None:intergenic |
| GTCATTTAAAGCTGTGTTAA+TGG | 0.225012 | 3.4:-64086028 | None:intergenic |
| GTGAAACTGCTTCAAATCTT+TGG | 0.255939 | 3.4:-64085537 | None:intergenic |
| TGGTGGACCAGTGGCAATTC+TGG | 0.279377 | 3.4:+64085306 | MS.gene38399:CDS |
| CATCCCCAATGTGTTACTTT+TGG | 0.286775 | 3.4:+64085382 | MS.gene38399:CDS |
| CTCGTTAAAGATTTGTCTTT+AGG | 0.287937 | 3.4:-64085571 | None:intergenic |
| CCGTGATGGACGTGTTTATA+TGG | 0.287982 | 3.4:+64086915 | MS.gene38399:CDS |
| GTTATTCAGAATCATGCTTT+TGG | 0.288650 | 3.4:+64087013 | MS.gene38399:CDS |
| GGTTGGAACTTGCAGGAGTA+TGG | 0.289780 | 3.4:+64086752 | MS.gene38399:CDS |
| TTCTTCCCTTCAAATTCTTC+AGG | 0.306183 | 3.4:-64086811 | None:intergenic |
| GGTTTCACCAAAGGTTGTTT+TGG | 0.314006 | 3.4:-64084298 | None:intergenic |
| TGGCAATTCTGGCAACCCTT+TGG | 0.317237 | 3.4:+64085317 | MS.gene38399:CDS |
| AAGGGTCTATAAGGACTAAA+AGG | 0.332391 | 3.4:-64085739 | None:intergenic |
| AAGAAAGAATGGGTTGAAAT+AGG | 0.337064 | 3.4:+64086829 | MS.gene38399:CDS |
| GGCAATTCTGGCAACCCTTT+GGG | 0.345081 | 3.4:+64085318 | MS.gene38399:CDS |
| TCTATAAGGTAGTGTCTATC+TGG | 0.346086 | 3.4:-64084201 | None:intergenic |
| TGTCATATCTCATCACAAAA+TGG | 0.352184 | 3.4:-64085474 | None:intergenic |
| GCATGCTGCTTGTAGGCTAA+TGG | 0.361589 | 3.4:+64085675 | MS.gene38399:CDS |
| GTGAAGAGGTTGGAACTTGC+AGG | 0.368811 | 3.4:+64086745 | MS.gene38399:CDS |
| TTGTCTGAGCATACCACTTC+AGG | 0.369744 | 3.4:+64085991 | MS.gene38399:CDS |
| AGTGGAGCAAGGAGGATTCT+TGG | 0.372615 | 3.4:-64085502 | None:intergenic |
| TGGTGTCTTGTGAGCCTTCA+AGG | 0.377231 | 3.4:-64084181 | None:intergenic |
| TTTAGTCCTTATAGACCCTT+TGG | 0.382405 | 3.4:+64085742 | MS.gene38399:CDS |
| TAGAAGACTAGTTGAGCCTT+TGG | 0.383000 | 3.4:+64086861 | MS.gene38399:CDS |
| GATTCTTCCCTATGCTGTAT+TGG | 0.390982 | 3.4:-64087201 | None:intergenic |
| TAAGTTCCAAAGGGTCTATA+AGG | 0.394319 | 3.4:-64085748 | None:intergenic |
| ATGACTTTGCCAAAATCTCT+TGG | 0.397578 | 3.4:-64084407 | None:intergenic |
| CATGCTGCTTGTAGGCTAAT+GGG | 0.400935 | 3.4:+64085676 | MS.gene38399:CDS |
| ATGCTACAAGGAGAGAAAAT+TGG | 0.407091 | 3.4:+64085437 | MS.gene38399:CDS |
| ATCATCAGCTTTCCAGCATC+AGG | 0.410129 | 3.4:+64084255 | MS.gene38399:CDS |
| TCAAGCAGCAGCAGCATTAG+AGG | 0.410513 | 3.4:+64086561 | MS.gene38399:CDS |
| TCACAAGGCATGCTGCTTGT+AGG | 0.417204 | 3.4:+64085668 | MS.gene38399:CDS |
| TGGTAACAATGAACCTGGTT+TGG | 0.418486 | 3.4:+64084359 | MS.gene38399:CDS |
| ATAAGTTATGGCACTGAACT+AGG | 0.420114 | 3.4:+64085916 | MS.gene38399:CDS |
| CAGAAGCAAATAGTGTTTGC+AGG | 0.421391 | 3.4:+64085274 | MS.gene38399:CDS |
| TGGTATTCCAAAACAACCTT+TGG | 0.421794 | 3.4:+64084291 | MS.gene38399:CDS |
| GTGTTTGCAGGGCACTCATC+TGG | 0.428673 | 3.4:+64085286 | MS.gene38399:CDS |
| CTGCGCCAGCATATAAGTTA+TGG | 0.429435 | 3.4:+64085904 | MS.gene38399:CDS |
| GTCACGTGCTGCGTCCTTGA+AGG | 0.431843 | 3.4:+64084167 | MS.gene38399:CDS |
| GTCATCATCATTCAAAGATC+AGG | 0.435210 | 3.4:+64084425 | MS.gene38399:CDS |
| CCAACCTCTTCACATTTGCT+TGG | 0.441286 | 3.4:-64086735 | None:intergenic |
| TTTCCTTCACTTAAAAGCAT+TGG | 0.443436 | 3.4:+64084339 | MS.gene38399:CDS |
| TCTGGCAACCCTTTGGGCCA+TGG | 0.444635 | 3.4:+64085324 | MS.gene38399:CDS |
| GGAAAGCTGATGATAACTTC+TGG | 0.445370 | 3.4:-64084246 | None:intergenic |
| AAGAGGTGCAAGTGAGATCA+TGG | 0.448721 | 3.4:+64084119 | MS.gene38399:CDS |
| CTTCGAAGATGTTAAGGATA+GGG | 0.449060 | 3.4:+64087074 | MS.gene38399:CDS |
| ATGACCTGCAGAATTGCATC+AGG | 0.450270 | 3.4:-64085823 | None:intergenic |
| AGAACCAAAAGTAACACATT+GGG | 0.450634 | 3.4:-64085386 | None:intergenic |
| GAACTTCCTGAAGAATTTGA+AGG | 0.450830 | 3.4:+64086805 | MS.gene38399:CDS |
| AATTTGAAGGGAAGAAAGAA+TGG | 0.451649 | 3.4:+64086818 | MS.gene38399:CDS |
| TGGAGTAAGAATAGTAAAGT+TGG | 0.456690 | 3.4:+64087126 | MS.gene38399:CDS |
| AAATCTTGAAGCTGAATGTT+GGG | 0.458634 | 3.4:+64085941 | MS.gene38399:CDS |
| TGGAGTTAGGTAGGTTTCCA+TGG | 0.460618 | 3.4:-64085341 | None:intergenic |
| CAAATTACTATAGACATTCA+AGG | 0.461160 | 3.4:+64086890 | MS.gene38399:CDS |
| CACATTTGCTTGGAAATCAT+CGG | 0.465692 | 3.4:-64086725 | None:intergenic |
| TAAGAATAGTAAAGTTGGTA+AGG | 0.475935 | 3.4:+64087131 | MS.gene38399:CDS |
| AGCTTTAAATGACCTTGGTC+TGG | 0.477253 | 3.4:+64086038 | MS.gene38399:CDS |
| TCTTGGAAAACACCTGATGC+TGG | 0.477334 | 3.4:-64084267 | None:intergenic |
| GGTTGGAACATGCTGATAAG+AGG | 0.477403 | 3.4:+64086980 | MS.gene38399:CDS |
| AAAATCTTGAAGCTGAATGT+TGG | 0.480384 | 3.4:+64085940 | MS.gene38399:CDS |
| TGGAGGAACAGATAAGTGAT+TGG | 0.490570 | 3.4:+64087106 | MS.gene38399:CDS |
| CCAAGCAAATGTGAAGAGGT+TGG | 0.496053 | 3.4:+64086735 | MS.gene38399:CDS |
| GTAGGTTTCCATGGCCCAAA+GGG | 0.497022 | 3.4:-64085332 | None:intergenic |
| AAAGTCCTTCGAAGATGTTA+AGG | 0.497847 | 3.4:+64087068 | MS.gene38399:CDS |
| ACTCGTCTCGGAAGAGCCAC+TGG | 0.501728 | 3.4:+64085601 | MS.gene38399:CDS |
| CCTTCGAAGATGTTAAGGAT+AGG | 0.505414 | 3.4:+64087073 | MS.gene38399:CDS |
| AGGTTACTACGATGCATTCA+AGG | 0.506073 | 3.4:+64086690 | MS.gene38399:CDS |
| AACACAGCTTTAAATGACCT+TGG | 0.508912 | 3.4:+64086033 | MS.gene38399:CDS |
| TACATCTTCTGCACTACAAG+TGG | 0.509213 | 3.4:+64085769 | MS.gene38399:CDS |
| CAGCATTAGAGGAACGGAAA+AGG | 0.510218 | 3.4:+64086572 | MS.gene38399:CDS |
| AATGAATATGTAGGTGGAGA+GGG | 0.514081 | 3.4:+64085240 | MS.gene38399:intron |
| CGACAGTTACAGAGAAATGC+GGG | 0.518524 | 3.4:+64086654 | MS.gene38399:CDS |
| AACACTACCAATACAGCATA+GGG | 0.521717 | 3.4:+64087194 | MS.gene38399:CDS |
| CAGTGCCATAACTTATATGC+TGG | 0.524445 | 3.4:-64085909 | None:intergenic |
| AGATACGCTCTGTGGAGGAT+AGG | 0.527227 | 3.4:+64086620 | MS.gene38399:CDS |
| CAGGTATACGCAAAGATGGT+TGG | 0.532943 | 3.4:+64086963 | MS.gene38399:CDS |
| GTTGGAACTTGCAGGAGTAT+GGG | 0.535986 | 3.4:+64086753 | MS.gene38399:CDS |
| GCAGAAGATGTAAGTTCCAA+AGG | 0.536622 | 3.4:-64085758 | None:intergenic |
| AAACCCTGATGCAATTCTGC+AGG | 0.537767 | 3.4:+64085819 | MS.gene38399:CDS |
| CATGCTGATAAGAGGGGAGA+AGG | 0.538512 | 3.4:+64086988 | MS.gene38399:CDS |
| ATTTGAAGGGAAGAAAGAAT+GGG | 0.545051 | 3.4:+64086819 | MS.gene38399:CDS |
| GATACAGGTATACGCAAAGA+TGG | 0.549876 | 3.4:+64086959 | MS.gene38399:CDS |
| AACTTCCTGAAGAATTTGAA+GGG | 0.551893 | 3.4:+64086806 | MS.gene38399:CDS |
| TCATCACAAAATGGAAGAAG+TGG | 0.551943 | 3.4:-64085465 | None:intergenic |
| GAAAATTGATTAACCAAACC+AGG | 0.558235 | 3.4:-64084372 | None:intergenic |
| AAACACTACCAATACAGCAT+AGG | 0.558238 | 3.4:+64087193 | MS.gene38399:CDS |
| AGCATTGGTAACAATGAACC+TGG | 0.562510 | 3.4:+64084354 | MS.gene38399:CDS |
| ATTTCCAAGCAAATGTGAAG+AGG | 0.565569 | 3.4:+64086731 | MS.gene38399:CDS |
| GAGAACCAAAAGTAACACAT+TGG | 0.565808 | 3.4:-64085387 | None:intergenic |
| GTTGGAACATGCTGATAAGA+GGG | 0.566266 | 3.4:+64086981 | MS.gene38399:CDS |
| CAAAAGTAACACATTGGGGA+TGG | 0.570292 | 3.4:-64085381 | None:intergenic |
| GGTAGGTTTCCATGGCCCAA+AGG | 0.576083 | 3.4:-64085333 | None:intergenic |
| TGCAGTATCACCACCTGAAG+TGG | 0.577481 | 3.4:-64086004 | None:intergenic |
| CAGAAGATGTAAGTTCCAAA+GGG | 0.580677 | 3.4:-64085757 | None:intergenic |
| GAAGTGGTATGCTCAGACAA+CGG | 0.582437 | 3.4:-64085988 | None:intergenic |
| TAATGAATATGTAGGTGGAG+AGG | 0.582489 | 3.4:+64085239 | MS.gene38399:intron |
| AGACACATGGCTTCATCAAG+AGG | 0.582491 | 3.4:+64084102 | None:intergenic |
| TTTGCAGGGCACTCATCTGG+TGG | 0.585914 | 3.4:+64085289 | MS.gene38399:CDS |
| CCTATCCTTAACATCTTCGA+AGG | 0.587211 | 3.4:-64087073 | None:intergenic |
| AGAAGCAAATAGTGTTTGCA+GGG | 0.594581 | 3.4:+64085275 | MS.gene38399:CDS |
| CAGCAGCAGCATTAGAGGAA+CGG | 0.598954 | 3.4:+64086566 | MS.gene38399:CDS |
| CGTGTTTATATGGCTAAAGG+TGG | 0.606548 | 3.4:+64086925 | MS.gene38399:CDS |
| CAAAAGACGAGAGTGGAGCA+AGG | 0.609151 | 3.4:-64085513 | None:intergenic |
| TACCTAACTCCAAAATCTCA+TGG | 0.613362 | 3.4:+64085352 | MS.gene38399:CDS |
| AAGCTGATGATAACTTCTGG+AGG | 0.614993 | 3.4:-64084243 | None:intergenic |
| AGGGTTGCCAGAATTGCCAC+TGG | 0.615205 | 3.4:-64085313 | None:intergenic |
| CGAAAAGATACGCTCTGTGG+AGG | 0.615259 | 3.4:+64086615 | MS.gene38399:CDS |
| GCACTCATCTGGTGGACCAG+TGG | 0.616635 | 3.4:+64085297 | MS.gene38399:CDS |
| TAGTAATTTGCAATATCCAA+AGG | 0.619711 | 3.4:-64086877 | None:intergenic |
| GGACGTGTTTATATGGCTAA+AGG | 0.620483 | 3.4:+64086922 | MS.gene38399:CDS |
| CAAATGCTGCAACTGTCACA+AGG | 0.620723 | 3.4:+64085653 | MS.gene38399:CDS |
| TTTATATGGCTAAAGGTGGA+AGG | 0.627178 | 3.4:+64086929 | MS.gene38399:CDS |
| AGAGGTGCAAGTGAGATCAT+GGG | 0.629840 | 3.4:+64084120 | MS.gene38399:CDS |
| CCATATAAACACGTCCATCA+CGG | 0.630887 | 3.4:-64086915 | None:intergenic |
| ACGAGCGAATCAACTCGTCT+CGG | 0.637998 | 3.4:+64085589 | MS.gene38399:CDS |
| GTAGAAATCTGAAGTTCCAG+TGG | 0.638315 | 3.4:-64085617 | None:intergenic |
| GCTGATAAGAGGGGAGAAGG+AGG | 0.642441 | 3.4:+64086991 | MS.gene38399:CDS |
| CTTTGGTCAAAAGACGAGAG+TGG | 0.642767 | 3.4:-64085520 | None:intergenic |
| AGCTGATGATAACTTCTGGA+GGG | 0.644106 | 3.4:-64084242 | None:intergenic |
| AGACATTCAAGGAACCGTGA+TGG | 0.644212 | 3.4:+64086901 | MS.gene38399:CDS |
| GAACCAAAAGTAACACATTG+GGG | 0.672795 | 3.4:-64085385 | None:intergenic |
| TCTGAGCATACCACTTCAGG+TGG | 0.673021 | 3.4:+64085994 | MS.gene38399:CDS |
| TGACCTGCAGAATTGCATCA+GGG | 0.673677 | 3.4:-64085822 | None:intergenic |
| TATGTTAACTTACCAGACCA+AGG | 0.679199 | 3.4:-64086050 | None:intergenic |
| TCGACAGTTACAGAGAAATG+CGG | 0.685743 | 3.4:+64086653 | MS.gene38399:CDS |
| GGACGAAAAGATACGCTCTG+TGG | 0.700804 | 3.4:+64086612 | MS.gene38399:CDS |
| TTGTAGGCTAATGGGAACAA+CGG | 0.702167 | 3.4:+64085684 | MS.gene38399:CDS |
| TTGGAACATGCTGATAAGAG+GGG | 0.704159 | 3.4:+64086982 | MS.gene38399:CDS |
| AAGACGAGAGTGGAGCAAGG+AGG | 0.708981 | 3.4:-64085510 | None:intergenic |
| TGAGTGCAGAACGAATTGAG+AGG | 0.735544 | 3.4:+64084145 | MS.gene38399:CDS |
| GACAGTTACAGAGAAATGCG+GGG | 0.754062 | 3.4:+64086655 | MS.gene38399:CDS |
| CTAACTCCAAAATCTCATGG+CGG | 0.764578 | 3.4:+64085355 | MS.gene38399:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATCAAATTTAAGAAAAA+TGG | + | chr3.4:64084809-64084828 | MS.gene38399:intron | 10.0% |
| !! | TTTCTTAAATTTGATAAAAT+AGG | - | chr3.4:64084807-64084826 | None:intergenic | 10.0% |
| !!! | AAAAAGTTCAATTTTAAAAT+GGG | + | chr3.4:64085010-64085029 | MS.gene38399:intron | 10.0% |
| !!! | ATATATTTTAATGAATATGT+AGG | + | chr3.4:64085231-64085250 | MS.gene38399:intron | 10.0% |
| !!! | ATTTTTAGCTTTAAAAAAAA+AGG | + | chr3.4:64084900-64084919 | MS.gene38399:intron | 10.0% |
| !! | AACTAGATCATATATATATA+TGG | - | chr3.4:64084488-64084507 | None:intergenic | 15.0% |
| !! | AATTTGTGAATTTGATAAAA+TGG | + | chr3.4:64085041-64085060 | MS.gene38399:intron | 15.0% |
| !! | ACACAAAAATTAAATGTTTA+AGG | - | chr3.4:64086199-64086218 | None:intergenic | 15.0% |
| !! | ATTGTAGAAAGTAAAAATAT+TGG | + | chr3.4:64084759-64084778 | MS.gene38399:intron | 15.0% |
| !!! | AAAAGTTCAATTTTAAAATG+GGG | + | chr3.4:64085011-64085030 | MS.gene38399:intron | 15.0% |
| !!! | AAATAGATTAAGATCTATTT+TGG | - | chr3.4:64084322-64084341 | None:intergenic | 15.0% |
| !!! | ATCAATTAAACTAATTGTTT+TGG | - | chr3.4:64084655-64084674 | None:intergenic | 15.0% |
| !!! | CAAAAAGTTCAATTTTAAAA+TGG | + | chr3.4:64085009-64085028 | MS.gene38399:intron | 15.0% |
| !!! | CATATTACTCTTTTTTTTAA+TGG | + | chr3.4:64086425-64086444 | MS.gene38399:intron | 15.0% |
| !!! | TTAAATGTTTAAGGTTTTTT+AGG | - | chr3.4:64086190-64086209 | None:intergenic | 15.0% |
| !! | AACATATTTATCCTTATCTA+TGG | + | chr3.4:64086067-64086086 | MS.gene38399:intron | 20.0% |
| !! | AATATGTGATTTCCAATTAA+AGG | - | chr3.4:64085412-64085431 | None:intergenic | 20.0% |
| !! | AATATTTGAGCATATCATTT+AGG | - | chr3.4:64084697-64084716 | None:intergenic | 20.0% |
| !! | AATTGCAAATAAATCAAACA+TGG | + | chr3.4:64085072-64085091 | MS.gene38399:intron | 20.0% |
| !! | CTTAAAAAAATAGTGATTGT+TGG | - | chr3.4:64084936-64084955 | None:intergenic | 20.0% |
| !! | CTTAAATTTGATAAAATAGG+AGG | - | chr3.4:64084804-64084823 | None:intergenic | 20.0% |
| !! | GCTTTGTCAAAAAAAAAAAA+TGG | - | chr3.4:64084591-64084610 | None:intergenic | 20.0% |
| !! | GTCAAAAAAAAAAAATGGTA+TGG | - | chr3.4:64084586-64084605 | None:intergenic | 20.0% |
| !!! | AATGTTACATTCTTTATTTG+AGG | + | chr3.4:64085203-64085222 | MS.gene38399:intron | 20.0% |
| !!! | ATTTAATTTCCTTCAAGTTT+AGG | - | chr3.4:64086329-64086348 | None:intergenic | 20.0% |
| !!! | CAACAATCACTATTTTTTTA+AGG | + | chr3.4:64084934-64084953 | MS.gene38399:intron | 20.0% |
| !!! | GTTTGATTTATTTGCAATTT+TGG | - | chr3.4:64085071-64085090 | None:intergenic | 20.0% |
| !!! | TAATACTTTTATGTGTTAGT+TGG | + | chr3.4:64086302-64086321 | MS.gene38399:intron | 20.0% |
| !!! | TATTTTAATGAATATGTAGG+TGG | + | chr3.4:64085234-64085253 | MS.gene38399:intron | 20.0% |
| !!! | TTTTTTAATGGAAGAGAAAA+TGG | + | chr3.4:64086437-64086456 | MS.gene38399:intron | 20.0% |
| ! | ACTTTCTACAATTATCGAAA+AGG | - | chr3.4:64084751-64084770 | None:intergenic | 25.0% |
| ! | CAAATTACTATAGACATTCA+AGG | + | chr3.4:64086890-64086909 | MS.gene38399:CDS | 25.0% |
| ! | GACAACAAATGTAATAATTG+AGG | - | chr3.4:64084862-64084881 | None:intergenic | 25.0% |
| ! | TATATATGGTTAAGATAGAG+AGG | - | chr3.4:64084474-64084493 | None:intergenic | 25.0% |
| ! | TTGTGAATTTGATAAAATGG+AGG | + | chr3.4:64085044-64085063 | MS.gene38399:intron | 25.0% |
| !! | AATAATCACATTGATTGACT+TGG | + | chr3.4:64086123-64086142 | MS.gene38399:intron | 25.0% |
| !! | TAGTAATTTGCAATATCCAA+AGG | - | chr3.4:64086880-64086899 | None:intergenic | 25.0% |
| !! | TTATTCAGAATCATGCTTTT+GGG | + | chr3.4:64087014-64087033 | MS.gene38399:CDS | 25.0% |
| !! | TTCTGTTGTTCTTTTCTATA+AGG | - | chr3.4:64084218-64084237 | None:intergenic | 25.0% |
| !!! | AAATGTTTTGAGTGAATATG+CGG | - | chr3.4:64086152-64086171 | None:intergenic | 25.0% |
| !!! | ATCATATGGATTTGTTAGAA+AGG | + | chr3.4:64085175-64085194 | MS.gene38399:intron | 25.0% |
| !!! | ATTGGTTTGATTACAAGTTT+TGG | + | chr3.4:64084777-64084796 | MS.gene38399:intron | 25.0% |
| !!! | TAAGAATAGTAAAGTTGGTA+AGG | + | chr3.4:64087131-64087150 | MS.gene38399:CDS | 25.0% |
| AAAATCTTGAAGCTGAATGT+TGG | + | chr3.4:64085940-64085959 | MS.gene38399:CDS | 30.0% | |
| AAATCTTGAAGCTGAATGTT+GGG | + | chr3.4:64085941-64085960 | MS.gene38399:CDS | 30.0% | |
| AACTTCCTGAAGAATTTGAA+GGG | + | chr3.4:64086806-64086825 | MS.gene38399:CDS | 30.0% | |
| AAGGAACAACGAAAAAAGTA+TGG | + | chr3.4:64086591-64086610 | MS.gene38399:CDS | 30.0% | |
| AATGGTATGGATGCTATAAA+AGG | - | chr3.4:64084573-64084592 | None:intergenic | 30.0% | |
| AATTTGAAGGGAAGAAAGAA+TGG | + | chr3.4:64086818-64086837 | MS.gene38399:CDS | 30.0% | |
| AGAACCAAAAGTAACACATT+GGG | - | chr3.4:64085389-64085408 | None:intergenic | 30.0% | |
| AGCTAAAGCTCTATTTAGAA+TGG | - | chr3.4:64086358-64086377 | None:intergenic | 30.0% | |
| ATTTGAAGGGAAGAAAGAAT+GGG | + | chr3.4:64086819-64086838 | MS.gene38399:CDS | 30.0% | |
| CTCGTTAAAGATTTGTCTTT+AGG | - | chr3.4:64085574-64085593 | None:intergenic | 30.0% | |
| GAAAATTGATTAACCAAACC+AGG | - | chr3.4:64084375-64084394 | None:intergenic | 30.0% | |
| TGGAGTAAGAATAGTAAAGT+TGG | + | chr3.4:64087126-64087145 | MS.gene38399:CDS | 30.0% | |
| TGTCATATCTCATCACAAAA+TGG | - | chr3.4:64085477-64085496 | None:intergenic | 30.0% | |
| ! | ACATATTTTCTCATGCTACA+AGG | + | chr3.4:64085425-64085444 | MS.gene38399:CDS | 30.0% |
| ! | GTCATTTAAAGCTGTGTTAA+TGG | - | chr3.4:64086031-64086050 | None:intergenic | 30.0% |
| ! | GTTATTCAGAATCATGCTTT+TGG | + | chr3.4:64087013-64087032 | MS.gene38399:CDS | 30.0% |
| ! | TTTCCTTCACTTAAAAGCAT+TGG | + | chr3.4:64084339-64084358 | MS.gene38399:CDS | 30.0% |
| !! | AAGAAAGAATGGGTTGAAAT+AGG | + | chr3.4:64086829-64086848 | MS.gene38399:CDS | 30.0% |
| !! | TTACCAATGCTTTTAAGTGA+AGG | - | chr3.4:64084345-64084364 | None:intergenic | 30.0% |
| !!! | ACTTTTGGTTCTCCTTTAAT+TGG | + | chr3.4:64085397-64085416 | MS.gene38399:CDS | 30.0% |
| !!! | ATCTATTTTGGTTTCACCAA+AGG | - | chr3.4:64084310-64084329 | None:intergenic | 30.0% |
| !!! | CATTTTTAGCATCAGTAGAT+AGG | - | chr3.4:64084630-64084649 | None:intergenic | 30.0% |
| !!! | TTGTTTTGGAATACCAATCT+TGG | - | chr3.4:64084287-64084306 | None:intergenic | 30.0% |
| !!! | TTTTTTAAGGCCAAAAGTCA+AGG | + | chr3.4:64084947-64084966 | MS.gene38399:intron | 30.0% |
| AAACACTACCAATACAGCAT+AGG | + | chr3.4:64087193-64087212 | MS.gene38399:CDS | 35.0% | |
| AAAGTCCTTCGAAGATGTTA+AGG | + | chr3.4:64087068-64087087 | MS.gene38399:CDS | 35.0% | |
| AACACTACCAATACAGCATA+GGG | + | chr3.4:64087194-64087213 | MS.gene38399:CDS | 35.0% | |
| AAGGGTCTATAAGGACTAAA+AGG | - | chr3.4:64085742-64085761 | None:intergenic | 35.0% | |
| AATGAATATGTAGGTGGAGA+GGG | + | chr3.4:64085240-64085259 | MS.gene38399:intron | 35.0% | |
| AGAAGCAAATAGTGTTTGCA+GGG | + | chr3.4:64085275-64085294 | MS.gene38399:CDS | 35.0% | |
| ATGACTTTGCCAAAATCTCT+TGG | - | chr3.4:64084410-64084429 | None:intergenic | 35.0% | |
| ATGCTACAAGGAGAGAAAAT+TGG | + | chr3.4:64085437-64085456 | MS.gene38399:CDS | 35.0% | |
| ATTTCCAAGCAAATGTGAAG+AGG | + | chr3.4:64086731-64086750 | MS.gene38399:CDS | 35.0% | |
| CACATTTGCTTGGAAATCAT+CGG | - | chr3.4:64086728-64086747 | None:intergenic | 35.0% | |
| CAGAAGATGTAAGTTCCAAA+GGG | - | chr3.4:64085760-64085779 | None:intergenic | 35.0% | |
| CATCAGTAGATAGGATAGTT+AGG | - | chr3.4:64084621-64084640 | None:intergenic | 35.0% | |
| CCAAAATCTCTTGGAATCTT+TGG | - | chr3.4:64084401-64084420 | None:intergenic | 35.0% | |
| CTTCGAAGATGTTAAGGATA+GGG | + | chr3.4:64087074-64087093 | MS.gene38399:CDS | 35.0% | |
| GAACACAAAAGCCATAGATA+AGG | - | chr3.4:64086081-64086100 | None:intergenic | 35.0% | |
| GAACCAAAAGTAACACATTG+GGG | - | chr3.4:64085388-64085407 | None:intergenic | 35.0% | |
| GAACTTCCTGAAGAATTTGA+AGG | + | chr3.4:64086805-64086824 | MS.gene38399:CDS | 35.0% | |
| GAGAACCAAAAGTAACACAT+TGG | - | chr3.4:64085390-64085409 | None:intergenic | 35.0% | |
| GTCATCATCATTCAAAGATC+AGG | + | chr3.4:64084425-64084444 | MS.gene38399:CDS | 35.0% | |
| GTGAAACTGCTTCAAATCTT+TGG | - | chr3.4:64085540-64085559 | None:intergenic | 35.0% | |
| TAAGTTCCAAAGGGTCTATA+AGG | - | chr3.4:64085751-64085770 | None:intergenic | 35.0% | |
| TAATGAATATGTAGGTGGAG+AGG | + | chr3.4:64085239-64085258 | MS.gene38399:intron | 35.0% | |
| TACAAAGAGGAAATCTCACA+TGG | - | chr3.4:64084725-64084744 | None:intergenic | 35.0% | |
| TACCTAACTCCAAAATCTCA+TGG | + | chr3.4:64085352-64085371 | MS.gene38399:CDS | 35.0% | |
| TATGTTAACTTACCAGACCA+AGG | - | chr3.4:64086053-64086072 | None:intergenic | 35.0% | |
| TCATCACAAAATGGAAGAAG+TGG | - | chr3.4:64085468-64085487 | None:intergenic | 35.0% | |
| TCTATAAGGTAGTGTCTATC+TGG | - | chr3.4:64084204-64084223 | None:intergenic | 35.0% | |
| TGGGATCAAAATTGCAACAA+AGG | + | chr3.4:64084971-64084990 | MS.gene38399:intron | 35.0% | |
| TGGTATTCCAAAACAACCTT+TGG | + | chr3.4:64084291-64084310 | MS.gene38399:CDS | 35.0% | |
| TTAGTTGGACCTAAACTTGA+AGG | + | chr3.4:64086317-64086336 | MS.gene38399:intron | 35.0% | |
| TTCTTCCCTTCAAATTCTTC+AGG | - | chr3.4:64086814-64086833 | None:intergenic | 35.0% | |
| TTTAGTCCTTATAGACCCTT+TGG | + | chr3.4:64085742-64085761 | MS.gene38399:CDS | 35.0% | |
| TTTATATGGCTAAAGGTGGA+AGG | + | chr3.4:64086929-64086948 | MS.gene38399:CDS | 35.0% | |
| ! | AGTTCAAGCTCGACTATTTT+AGG | - | chr3.4:64085109-64085128 | None:intergenic | 35.0% |
| ! | ATAAGTTATGGCACTGAACT+AGG | + | chr3.4:64085916-64085935 | MS.gene38399:CDS | 35.0% |
| ! | CCAAAGATTCCAAGAGATTT+TGG | + | chr3.4:64084398-64084417 | MS.gene38399:CDS | 35.0% |
| ! | TGCGTATACCTGTATCTTTT+TGG | - | chr3.4:64086955-64086974 | None:intergenic | 35.0% |
| !! | AACACAGCTTTAAATGACCT+TGG | + | chr3.4:64086033-64086052 | MS.gene38399:CDS | 35.0% |
| !! | ACAACGGAAGATTTTCTAGT+TGG | - | chr3.4:64085975-64085994 | None:intergenic | 35.0% |
| !! | AGGGTTCTACTTTTGTTAAG+TGG | + | chr3.4:64087166-64087185 | MS.gene38399:CDS | 35.0% |
| !! | ATCGAAAAGGTACTACAAAG+AGG | - | chr3.4:64084738-64084757 | None:intergenic | 35.0% |
| !! | GTTCTACTTTTGTTAAGTGG+TGG | + | chr3.4:64087169-64087188 | MS.gene38399:CDS | 35.0% |
| !!! | AGTTGGTAAGGATGTGTTTT+TGG | + | chr3.4:64087143-64087162 | MS.gene38399:CDS | 35.0% |
| !!! | ATGAGATTTTGGAGTTAGGT+AGG | - | chr3.4:64085353-64085372 | None:intergenic | 35.0% |
| !!! | TAAGGATAGGGTTTTGAAGT+TGG | + | chr3.4:64087086-64087105 | MS.gene38399:CDS | 35.0% |
| AAGCTGATGATAACTTCTGG+AGG | - | chr3.4:64084246-64084265 | None:intergenic | 40.0% | |
| AGCTGATGATAACTTCTGGA+GGG | - | chr3.4:64084245-64084264 | None:intergenic | 40.0% | |
| AGGTTACTACGATGCATTCA+AGG | + | chr3.4:64086690-64086709 | MS.gene38399:CDS | 40.0% | |
| CAAAAGTAACACATTGGGGA+TGG | - | chr3.4:64085384-64085403 | None:intergenic | 40.0% | |
| CAGAAGCAAATAGTGTTTGC+AGG | + | chr3.4:64085274-64085293 | MS.gene38399:CDS | 40.0% | |
| CAGTGCCATAACTTATATGC+TGG | - | chr3.4:64085912-64085931 | None:intergenic | 40.0% | |
| CCATATAAACACGTCCATCA+CGG | - | chr3.4:64086918-64086937 | None:intergenic | 40.0% | |
| CCTATCCTTAACATCTTCGA+AGG | - | chr3.4:64087076-64087095 | None:intergenic | 40.0% | |
| CCTTCGAAGATGTTAAGGAT+AGG | + | chr3.4:64087073-64087092 | MS.gene38399:CDS | 40.0% | |
| CGTGTTTATATGGCTAAAGG+TGG | + | chr3.4:64086925-64086944 | MS.gene38399:CDS | 40.0% | |
| CTAACTCCAAAATCTCATGG+CGG | + | chr3.4:64085355-64085374 | MS.gene38399:CDS | 40.0% | |
| GATACAGGTATACGCAAAGA+TGG | + | chr3.4:64086959-64086978 | MS.gene38399:CDS | 40.0% | |
| GATTCTTCCCTATGCTGTAT+TGG | - | chr3.4:64087204-64087223 | None:intergenic | 40.0% | |
| GCAGAAGATGTAAGTTCCAA+AGG | - | chr3.4:64085761-64085780 | None:intergenic | 40.0% | |
| GCTCACTGTCAAAGATCATA+TGG | + | chr3.4:64085161-64085180 | MS.gene38399:intron | 40.0% | |
| GGAAAGCTGATGATAACTTC+TGG | - | chr3.4:64084249-64084268 | None:intergenic | 40.0% | |
| GGACGTGTTTATATGGCTAA+AGG | + | chr3.4:64086922-64086941 | MS.gene38399:CDS | 40.0% | |
| GTTGGAACATGCTGATAAGA+GGG | + | chr3.4:64086981-64087000 | MS.gene38399:CDS | 40.0% | |
| TACATCTTCTGCACTACAAG+TGG | + | chr3.4:64085769-64085788 | MS.gene38399:CDS | 40.0% | |
| TCGACAGTTACAGAGAAATG+CGG | + | chr3.4:64086653-64086672 | MS.gene38399:CDS | 40.0% | |
| TGGAGGAACAGATAAGTGAT+TGG | + | chr3.4:64087106-64087125 | MS.gene38399:CDS | 40.0% | |
| TGGTAACAATGAACCTGGTT+TGG | + | chr3.4:64084359-64084378 | MS.gene38399:CDS | 40.0% | |
| TTGGAACATGCTGATAAGAG+GGG | + | chr3.4:64086982-64087001 | MS.gene38399:CDS | 40.0% | |
| TTGTAGGCTAATGGGAACAA+CGG | + | chr3.4:64085684-64085703 | MS.gene38399:CDS | 40.0% | |
| ! | CATCAGGTGTTTTCCAAGAT+TGG | + | chr3.4:64084271-64084290 | MS.gene38399:CDS | 40.0% |
| ! | GGTTTCACCAAAGGTTGTTT+TGG | - | chr3.4:64084301-64084320 | None:intergenic | 40.0% |
| ! | GTAGAAATCTGAAGTTCCAG+TGG | - | chr3.4:64085620-64085639 | None:intergenic | 40.0% |
| ! | TAGAAGACTAGTTGAGCCTT+TGG | + | chr3.4:64086861-64086880 | MS.gene38399:CDS | 40.0% |
| !! | AGCATTGGTAACAATGAACC+TGG | + | chr3.4:64084354-64084373 | MS.gene38399:CDS | 40.0% |
| !! | AGCTTTAAATGACCTTGGTC+TGG | + | chr3.4:64086038-64086057 | MS.gene38399:CDS | 40.0% |
| !!! | CATCCCCAATGTGTTACTTT+TGG | + | chr3.4:64085382-64085401 | MS.gene38399:CDS | 40.0% |
| !!! | GGTAAGGATGTGTTTTTGGA+GGG | + | chr3.4:64087147-64087166 | MS.gene38399:CDS | 40.0% |
| !!! | TGGTAAGGATGTGTTTTTGG+AGG | + | chr3.4:64087146-64087165 | MS.gene38399:CDS | 40.0% |
| AAACCCTGATGCAATTCTGC+AGG | + | chr3.4:64085819-64085838 | MS.gene38399:CDS | 45.0% | |
| AGACATTCAAGGAACCGTGA+TGG | + | chr3.4:64086901-64086920 | MS.gene38399:CDS | 45.0% | |
| ATCATCAGCTTTCCAGCATC+AGG | + | chr3.4:64084255-64084274 | MS.gene38399:CDS | 45.0% | |
| ATGACCTGCAGAATTGCATC+AGG | - | chr3.4:64085826-64085845 | None:intergenic | 45.0% | |
| ATGCGGGGACATCAGAAAAA+AGG | + | chr3.4:64086670-64086689 | MS.gene38399:CDS | 45.0% | |
| CAAATGCTGCAACTGTCACA+AGG | + | chr3.4:64085653-64085672 | MS.gene38399:CDS | 45.0% | |
| CAGCATTAGAGGAACGGAAA+AGG | + | chr3.4:64086572-64086591 | MS.gene38399:CDS | 45.0% | |
| CAGGTATACGCAAAGATGGT+TGG | + | chr3.4:64086963-64086982 | MS.gene38399:CDS | 45.0% | |
| CCAACCTCTTCACATTTGCT+TGG | - | chr3.4:64086738-64086757 | None:intergenic | 45.0% | |
| CCAAGCAAATGTGAAGAGGT+TGG | + | chr3.4:64086735-64086754 | MS.gene38399:CDS | 45.0% | |
| CGACAGTTACAGAGAAATGC+GGG | + | chr3.4:64086654-64086673 | MS.gene38399:CDS | 45.0% | |
| CTGCGCCAGCATATAAGTTA+TGG | + | chr3.4:64085904-64085923 | MS.gene38399:CDS | 45.0% | |
| CTTTGGTCAAAAGACGAGAG+TGG | - | chr3.4:64085523-64085542 | None:intergenic | 45.0% | |
| GAAGTGGTATGCTCAGACAA+CGG | - | chr3.4:64085991-64086010 | None:intergenic | 45.0% | |
| GACAGTTACAGAGAAATGCG+GGG | + | chr3.4:64086655-64086674 | MS.gene38399:CDS | 45.0% | |
| GGTTGGAACATGCTGATAAG+AGG | + | chr3.4:64086980-64086999 | MS.gene38399:CDS | 45.0% | |
| GTGGAAGGCCAAAAAGATAC+AGG | + | chr3.4:64086944-64086963 | MS.gene38399:CDS | 45.0% | |
| TAAGGCCAAAAGTCAAGGCT+GGG | + | chr3.4:64084952-64084971 | MS.gene38399:intron | 45.0% | |
| TCTTGGAAAACACCTGATGC+TGG | - | chr3.4:64084270-64084289 | None:intergenic | 45.0% | |
| TGACCTGCAGAATTGCATCA+GGG | - | chr3.4:64085825-64085844 | None:intergenic | 45.0% | |
| TGAGTGCAGAACGAATTGAG+AGG | + | chr3.4:64084145-64084164 | MS.gene38399:CDS | 45.0% | |
| TGGAGTTAGGTAGGTTTCCA+TGG | - | chr3.4:64085344-64085363 | None:intergenic | 45.0% | |
| TTAAGGCCAAAAGTCAAGGC+TGG | + | chr3.4:64084951-64084970 | MS.gene38399:intron | 45.0% | |
| TTGTCTGAGCATACCACTTC+AGG | + | chr3.4:64085991-64086010 | MS.gene38399:CDS | 45.0% | |
| ! | AAGAGGTGCAAGTGAGATCA+TGG | + | chr3.4:64084119-64084138 | MS.gene38399:CDS | 45.0% |
| ! | AGAATCATGCTTTTGGGCTG+AGG | + | chr3.4:64087020-64087039 | MS.gene38399:CDS | 45.0% |
| ! | AGAGGTGCAAGTGAGATCAT+GGG | + | chr3.4:64084120-64084139 | MS.gene38399:CDS | 45.0% |
| ! | ATGCTGGCGCAGACTTTTAT+CGG | - | chr3.4:64085896-64085915 | None:intergenic | 45.0% |
| ! | CATGCTGCTTGTAGGCTAAT+GGG | + | chr3.4:64085676-64085695 | MS.gene38399:CDS | 45.0% |
| ! | GTTGGAACTTGCAGGAGTAT+GGG | + | chr3.4:64086753-64086772 | MS.gene38399:CDS | 45.0% |
| ! | TGGATTCCGCCATGAGATTT+TGG | - | chr3.4:64085364-64085383 | None:intergenic | 45.0% |
| ! | TTGATCCCAGCCTTGACTTT+TGG | - | chr3.4:64084960-64084979 | None:intergenic | 45.0% |
| !! | CCGTGATGGACGTGTTTATA+TGG | + | chr3.4:64086915-64086934 | MS.gene38399:CDS | 45.0% |
| !!! | CGCCATGAGATTTTGGAGTT+AGG | - | chr3.4:64085357-64085376 | None:intergenic | 45.0% |
| !!! | GGATAGGGTTTTGAAGTTGG+AGG | + | chr3.4:64087089-64087108 | MS.gene38399:CDS | 45.0% |
| ACGAGCGAATCAACTCGTCT+CGG | + | chr3.4:64085589-64085608 | MS.gene38399:CDS | 50.0% | |
| AGATACGCTCTGTGGAGGAT+AGG | + | chr3.4:64086620-64086639 | MS.gene38399:CDS | 50.0% | |
| AGTGGAGCAAGGAGGATTCT+TGG | - | chr3.4:64085505-64085524 | None:intergenic | 50.0% | |
| CAAAAGACGAGAGTGGAGCA+AGG | - | chr3.4:64085516-64085535 | None:intergenic | 50.0% | |
| CAGCAGCAGCATTAGAGGAA+CGG | + | chr3.4:64086566-64086585 | MS.gene38399:CDS | 50.0% | |
| CATGCTGATAAGAGGGGAGA+AGG | + | chr3.4:64086988-64087007 | MS.gene38399:CDS | 50.0% | |
| CGAAAAGATACGCTCTGTGG+AGG | + | chr3.4:64086615-64086634 | MS.gene38399:CDS | 50.0% | |
| GGACGAAAAGATACGCTCTG+TGG | + | chr3.4:64086612-64086631 | MS.gene38399:CDS | 50.0% | |
| GGCAATTCTGGCAACCCTTT+GGG | + | chr3.4:64085318-64085337 | MS.gene38399:CDS | 50.0% | |
| GGTTGGAACTTGCAGGAGTA+TGG | + | chr3.4:64086752-64086771 | MS.gene38399:CDS | 50.0% | |
| GTAGGTTTCCATGGCCCAAA+GGG | - | chr3.4:64085335-64085354 | None:intergenic | 50.0% | |
| GTGAAGAGGTTGGAACTTGC+AGG | + | chr3.4:64086745-64086764 | MS.gene38399:CDS | 50.0% | |
| TCAAGCAGCAGCAGCATTAG+AGG | + | chr3.4:64086561-64086580 | MS.gene38399:CDS | 50.0% | |
| TCTGAGCATACCACTTCAGG+TGG | + | chr3.4:64085994-64086013 | MS.gene38399:CDS | 50.0% | |
| TGCAGTATCACCACCTGAAG+TGG | - | chr3.4:64086007-64086026 | None:intergenic | 50.0% | |
| TGGCAATTCTGGCAACCCTT+TGG | + | chr3.4:64085317-64085336 | MS.gene38399:CDS | 50.0% | |
| TGGTGTCTTGTGAGCCTTCA+AGG | - | chr3.4:64084184-64084203 | None:intergenic | 50.0% | |
| ! | ATCATGCTTTTGGGCTGAGG+TGG | + | chr3.4:64087023-64087042 | MS.gene38399:CDS | 50.0% |
| ! | GCATGCTGCTTGTAGGCTAA+TGG | + | chr3.4:64085675-64085694 | MS.gene38399:CDS | 50.0% |
| ! | TCACAAGGCATGCTGCTTGT+AGG | + | chr3.4:64085668-64085687 | MS.gene38399:CDS | 50.0% |
| AAGACGAGAGTGGAGCAAGG+AGG | - | chr3.4:64085513-64085532 | None:intergenic | 55.0% | |
| AGGGTTGCCAGAATTGCCAC+TGG | - | chr3.4:64085316-64085335 | None:intergenic | 55.0% | |
| GCTGATAAGAGGGGAGAAGG+AGG | + | chr3.4:64086991-64087010 | MS.gene38399:CDS | 55.0% | |
| GGTAGGTTTCCATGGCCCAA+AGG | - | chr3.4:64085336-64085355 | None:intergenic | 55.0% | |
| ! | ATGCTTTTGGGCTGAGGTGG+AGG | + | chr3.4:64087026-64087045 | MS.gene38399:CDS | 55.0% |
| ! | GTGTTTGCAGGGCACTCATC+TGG | + | chr3.4:64085286-64085305 | MS.gene38399:CDS | 55.0% |
| ! | TGGTGGACCAGTGGCAATTC+TGG | + | chr3.4:64085306-64085325 | MS.gene38399:CDS | 55.0% |
| ! | TTTGCAGGGCACTCATCTGG+TGG | + | chr3.4:64085289-64085308 | MS.gene38399:CDS | 55.0% |
| ACTCGTCTCGGAAGAGCCAC+TGG | + | chr3.4:64085601-64085620 | MS.gene38399:CDS | 60.0% | |
| GTCACGTGCTGCGTCCTTGA+AGG | + | chr3.4:64084167-64084186 | MS.gene38399:CDS | 60.0% | |
| TCTGGCAACCCTTTGGGCCA+TGG | + | chr3.4:64085324-64085343 | MS.gene38399:CDS | 60.0% | |
| ! | GCACTCATCTGGTGGACCAG+TGG | + | chr3.4:64085297-64085316 | MS.gene38399:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 64084108 | 64087251 | 64084108 | ID=MS.gene38399 |
| chr3.4 | mRNA | 64084108 | 64087251 | 64084108 | ID=MS.gene38399.t1;Parent=MS.gene38399 |
| chr3.4 | exon | 64084108 | 64084446 | 64084108 | ID=MS.gene38399.t1.exon1;Parent=MS.gene38399.t1 |
| chr3.4 | CDS | 64084108 | 64084446 | 64084108 | ID=cds.MS.gene38399.t1;Parent=MS.gene38399.t1 |
| chr3.4 | exon | 64085253 | 64086059 | 64085253 | ID=MS.gene38399.t1.exon2;Parent=MS.gene38399.t1 |
| chr3.4 | CDS | 64085253 | 64086059 | 64085253 | ID=cds.MS.gene38399.t1;Parent=MS.gene38399.t1 |
| chr3.4 | exon | 64086538 | 64087251 | 64086538 | ID=MS.gene38399.t1.exon3;Parent=MS.gene38399.t1 |
| chr3.4 | CDS | 64086538 | 64087251 | 64086538 | ID=cds.MS.gene38399.t1;Parent=MS.gene38399.t1 |
| Gene Sequence |
| Protein sequence |
