Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38414.t1 | XP_013461062.1 | 76 | 620 | 146 | 3 | 1 | 619 | 1 | 618 | 2.00E-265 | 924.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38414.t1 | Q9SU72 | 36.9 | 645 | 332 | 12 | 10 | 615 | 6 | 614 | 9.0e-105 | 382.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38414.t1 | A0A072V056 | 76.0 | 620 | 146 | 3 | 1 | 619 | 1 | 618 | 1.5e-265 | 924.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38404 | MS.gene38414 | PPI |
| MS.gene38414 | MS.gene38399 | PPI |
| MS.gene38414 | MS.gene38408 | PPI |
| MS.gene38414 | MS.gene062716 | PPI |
| MS.gene38414 | MS.gene25909 | PPI |
| MS.gene38414 | MS.gene014545 | PPI |
| MS.gene38414 | MS.gene38392 | PPI |
| MS.gene38414 | MS.gene24315 | PPI |
| MS.gene38414 | MS.gene69123 | PPI |
| MS.gene38414 | MS.gene022225 | PPI |
| MS.gene38414 | MS.gene26931 | PPI |
| MS.gene38414 | MS.gene27345 | PPI |
| MS.gene38414 | MS.gene074397 | PPI |
| MS.gene38414 | MS.gene70582 | PPI |
| MS.gene42360 | MS.gene38414 | PPI |
| MS.gene38392 | MS.gene38414 | PPI |
| MS.gene38414 | MS.gene044112 | PPI |
| MS.gene25879 | MS.gene38414 | PPI |
| MS.gene38414 | MS.gene022252 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38414.t1 | MTR_3g078633 | 78.387 | 620 | 131 | 3 | 1 | 619 | 1 | 618 | 0.0 | 1002 |
| MS.gene38414.t1 | MTR_3g078633 | 78.320 | 512 | 109 | 2 | 109 | 619 | 36 | 546 | 0.0 | 833 |
| MS.gene38414.t1 | MTR_3g079340 | 53.130 | 623 | 262 | 12 | 11 | 619 | 10 | 616 | 0.0 | 622 |
| MS.gene38414.t1 | MTR_3g081450 | 81.818 | 99 | 18 | 0 | 508 | 606 | 32 | 130 | 1.85e-52 | 178 |
| MS.gene38414.t1 | MTR_8g494200 | 25.841 | 565 | 338 | 21 | 77 | 603 | 86 | 607 | 6.09e-45 | 169 |
| MS.gene38414.t1 | MTR_3g467360 | 25.915 | 355 | 207 | 13 | 278 | 600 | 209 | 539 | 1.97e-23 | 105 |
| MS.gene38414.t1 | MTR_3g467360 | 25.915 | 355 | 207 | 13 | 278 | 600 | 215 | 545 | 2.33e-23 | 105 |
| MS.gene38414.t1 | MTR_6g007985 | 25.140 | 358 | 213 | 14 | 280 | 605 | 136 | 470 | 1.18e-21 | 99.0 |
| MS.gene38414.t1 | MTR_6g008015 | 25.140 | 358 | 213 | 14 | 280 | 605 | 213 | 547 | 1.40e-21 | 99.4 |
| MS.gene38414.t1 | MTR_0095s0020 | 25.882 | 340 | 194 | 14 | 122 | 443 | 155 | 454 | 1.63e-21 | 99.4 |
| MS.gene38414.t1 | MTR_6g008055 | 26.039 | 361 | 195 | 16 | 280 | 601 | 213 | 540 | 2.17e-19 | 92.4 |
| MS.gene38414.t1 | MTR_6g007975 | 25.634 | 355 | 206 | 14 | 280 | 601 | 213 | 542 | 4.05e-19 | 91.7 |
| MS.gene38414.t1 | MTR_6g007980 | 24.650 | 357 | 209 | 13 | 278 | 600 | 209 | 539 | 2.66e-17 | 85.9 |
| MS.gene38414.t1 | MTR_6g007980 | 24.860 | 358 | 208 | 13 | 278 | 600 | 209 | 540 | 2.67e-17 | 85.9 |
| MS.gene38414.t1 | MTR_6g007980 | 24.791 | 359 | 208 | 13 | 278 | 600 | 209 | 541 | 2.82e-17 | 85.9 |
| MS.gene38414.t1 | MTR_8g011610 | 35.632 | 87 | 53 | 1 | 117 | 200 | 225 | 311 | 5.95e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38414.t1 | AT3G48090 | 38.485 | 647 | 323 | 12 | 10 | 617 | 6 | 616 | 4.74e-140 | 421 |
| MS.gene38414.t1 | AT3G48080 | 37.697 | 634 | 332 | 14 | 10 | 608 | 6 | 611 | 2.81e-135 | 409 |
| MS.gene38414.t1 | AT3G48090 | 40.485 | 536 | 255 | 9 | 117 | 617 | 2 | 508 | 7.61e-125 | 379 |
| MS.gene38414.t1 | AT3G52430 | 25.407 | 307 | 180 | 10 | 270 | 552 | 175 | 456 | 4.75e-22 | 100 |
| MS.gene38414.t1 | AT5G14930 | 29.412 | 221 | 125 | 8 | 407 | 601 | 293 | 508 | 5.52e-17 | 84.7 |
Find 136 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAATCTCTTGGAATCTT+TGG | 0.121768 | 3.4:-63782296 | None:intergenic |
| CCAAAGATTCCAAGAGATTT+TGG | 0.122201 | 3.4:+63782296 | MS.gene38414:CDS |
| AAATAGATTAAGATCTATTT+TGG | 0.185777 | 3.4:-63782217 | None:intergenic |
| AATATGTGATTTCCAATTAA+AGG | 0.214012 | 3.4:-63783311 | None:intergenic |
| TGGATTCCGCCATGAGATTT+TGG | 0.223602 | 3.4:-63783263 | None:intergenic |
| GTCATTTAAAGCTGTGTTAA+TGG | 0.225012 | 3.4:-63783930 | None:intergenic |
| GTGAAACTGCTTCAAATCTT+TGG | 0.255939 | 3.4:-63783439 | None:intergenic |
| TGGTGGACCAGTGGCAATTC+TGG | 0.279377 | 3.4:+63783208 | MS.gene38414:CDS |
| CATCCCCAATGTGTTACTTT+TGG | 0.286775 | 3.4:+63783284 | MS.gene38414:CDS |
| CTCGTTAAAGATTTGTCTTT+AGG | 0.287937 | 3.4:-63783473 | None:intergenic |
| CCGTGATGGACGTGTTTATA+TGG | 0.287982 | 3.4:+63784817 | MS.gene38414:CDS |
| GTTATTCAGAATCATGCTTT+TGG | 0.288650 | 3.4:+63784915 | MS.gene38414:CDS |
| GGTTGGAACTTGCAGGAGTA+TGG | 0.289780 | 3.4:+63784654 | MS.gene38414:CDS |
| TTCTTCCCTTCAAATTCTTC+AGG | 0.306183 | 3.4:-63784713 | None:intergenic |
| GGTTTCACCAAAGGTTGTTT+TGG | 0.314006 | 3.4:-63782196 | None:intergenic |
| TGGCAATTCTGGCAACCCTT+TGG | 0.317237 | 3.4:+63783219 | MS.gene38414:CDS |
| AAGGGTCTATAAGGACTAAA+AGG | 0.332391 | 3.4:-63783641 | None:intergenic |
| AAGAAAGAATGGGTTGAAAT+AGG | 0.337064 | 3.4:+63784731 | MS.gene38414:CDS |
| GGCAATTCTGGCAACCCTTT+GGG | 0.345081 | 3.4:+63783220 | MS.gene38414:CDS |
| TCTATAAGGTAGTGTCTATC+TGG | 0.346086 | 3.4:-63782099 | None:intergenic |
| TGTCATATCTCATCACAAAA+TGG | 0.352184 | 3.4:-63783376 | None:intergenic |
| GCATGCTGCTTGTAGGCTAA+TGG | 0.361589 | 3.4:+63783577 | MS.gene38414:CDS |
| GTGAAGAGGTTGGAACTTGC+AGG | 0.368811 | 3.4:+63784647 | MS.gene38414:CDS |
| TTGTCTGAGCATACCACTTC+AGG | 0.369744 | 3.4:+63783893 | MS.gene38414:CDS |
| AGTGGAGCAAGGAGGATTCT+TGG | 0.372615 | 3.4:-63783404 | None:intergenic |
| TGGTGTCTTGTGAGCCTTCA+AGG | 0.377231 | 3.4:-63782079 | None:intergenic |
| TTTAGTCCTTATAGACCCTT+TGG | 0.382405 | 3.4:+63783644 | MS.gene38414:CDS |
| TAGAAGACTAGTTGAGCCTT+TGG | 0.383000 | 3.4:+63784763 | MS.gene38414:CDS |
| GATTCTTCCCTATGCTGTAT+TGG | 0.390982 | 3.4:-63785103 | None:intergenic |
| TAAGTTCCAAAGGGTCTATA+AGG | 0.394319 | 3.4:-63783650 | None:intergenic |
| ATGACTTTGCCAAAATCTCT+TGG | 0.397578 | 3.4:-63782305 | None:intergenic |
| CATGCTGCTTGTAGGCTAAT+GGG | 0.400935 | 3.4:+63783578 | MS.gene38414:CDS |
| ATGCTACAAGGAGAGAAAAT+TGG | 0.407091 | 3.4:+63783339 | MS.gene38414:CDS |
| ATCATCAGCTTTCCAGCATC+AGG | 0.410129 | 3.4:+63782153 | MS.gene38414:CDS |
| TCAAGCAGCAGCAGCATTAG+AGG | 0.410513 | 3.4:+63784463 | MS.gene38414:CDS |
| TCACAAGGCATGCTGCTTGT+AGG | 0.417204 | 3.4:+63783570 | MS.gene38414:CDS |
| TGGTAACAATGAACCTGGTT+TGG | 0.418486 | 3.4:+63782257 | MS.gene38414:CDS |
| ATAAGTTATGGCACTGAACT+AGG | 0.420114 | 3.4:+63783818 | MS.gene38414:CDS |
| CAGAAGCAAATAGTGTTTGC+AGG | 0.421391 | 3.4:+63783176 | MS.gene38414:CDS |
| TGGTATTCCAAAACAACCTT+TGG | 0.421794 | 3.4:+63782189 | MS.gene38414:CDS |
| GTGTTTGCAGGGCACTCATC+TGG | 0.428673 | 3.4:+63783188 | MS.gene38414:CDS |
| CTGCGCCAGCATATAAGTTA+TGG | 0.429435 | 3.4:+63783806 | MS.gene38414:CDS |
| GTCACGTGCTGCGTCCTTGA+AGG | 0.431843 | 3.4:+63782065 | MS.gene38414:CDS |
| GTCATCATCATTCAAAGATC+AGG | 0.435210 | 3.4:+63782323 | MS.gene38414:CDS |
| CCAACCTCTTCACATTTGCT+TGG | 0.441286 | 3.4:-63784637 | None:intergenic |
| TTTCCTTCACTTAAAAGCAT+TGG | 0.443436 | 3.4:+63782237 | MS.gene38414:CDS |
| TCTGGCAACCCTTTGGGCCA+TGG | 0.444635 | 3.4:+63783226 | MS.gene38414:CDS |
| GGAAAGCTGATGATAACTTC+TGG | 0.445370 | 3.4:-63782144 | None:intergenic |
| AAGAGGTGCAAGTGAGATCA+TGG | 0.448721 | 3.4:+63782017 | MS.gene38414:CDS |
| CTTCGAAGATGTTAAGGATA+GGG | 0.449060 | 3.4:+63784976 | MS.gene38414:CDS |
| ATGACCTGCAGAATTGCATC+AGG | 0.450270 | 3.4:-63783725 | None:intergenic |
| AGAACCAAAAGTAACACATT+GGG | 0.450634 | 3.4:-63783288 | None:intergenic |
| GAACTTCCTGAAGAATTTGA+AGG | 0.450830 | 3.4:+63784707 | MS.gene38414:CDS |
| AATTTGAAGGGAAGAAAGAA+TGG | 0.451649 | 3.4:+63784720 | MS.gene38414:CDS |
| TGGAGTAAGAATAGTAAAGT+TGG | 0.456690 | 3.4:+63785028 | MS.gene38414:CDS |
| AAATCTTGAAGCTGAATGTT+GGG | 0.458634 | 3.4:+63783843 | MS.gene38414:CDS |
| TGGAGTTAGGTAGGTTTCCA+TGG | 0.460618 | 3.4:-63783243 | None:intergenic |
| CAAATTACTATAGACATTCA+AGG | 0.461160 | 3.4:+63784792 | MS.gene38414:CDS |
| CACATTTGCTTGGAAATCAT+CGG | 0.465692 | 3.4:-63784627 | None:intergenic |
| TAAGAATAGTAAAGTTGGTA+AGG | 0.475935 | 3.4:+63785033 | MS.gene38414:CDS |
| AGCTTTAAATGACCTTGGTC+TGG | 0.477253 | 3.4:+63783940 | MS.gene38414:CDS |
| TCTTGGAAAACACCTGATGC+TGG | 0.477334 | 3.4:-63782165 | None:intergenic |
| GGTTGGAACATGCTGATAAG+AGG | 0.477403 | 3.4:+63784882 | MS.gene38414:CDS |
| AAAATCTTGAAGCTGAATGT+TGG | 0.480384 | 3.4:+63783842 | MS.gene38414:CDS |
| TGGAGGAACAGATAAGTGAT+TGG | 0.490570 | 3.4:+63785008 | MS.gene38414:CDS |
| CCAAGCAAATGTGAAGAGGT+TGG | 0.496053 | 3.4:+63784637 | MS.gene38414:CDS |
| GTAGGTTTCCATGGCCCAAA+GGG | 0.497022 | 3.4:-63783234 | None:intergenic |
| AAAGTCCTTCGAAGATGTTA+AGG | 0.497847 | 3.4:+63784970 | MS.gene38414:CDS |
| ACTCGTCTCGGAAGAGCCAC+TGG | 0.501728 | 3.4:+63783503 | MS.gene38414:CDS |
| CCTTCGAAGATGTTAAGGAT+AGG | 0.505414 | 3.4:+63784975 | MS.gene38414:CDS |
| AGGTTACTACGATGCATTCA+AGG | 0.506073 | 3.4:+63784592 | MS.gene38414:CDS |
| AACACAGCTTTAAATGACCT+TGG | 0.508912 | 3.4:+63783935 | MS.gene38414:CDS |
| TACATCTTCTGCACTACAAG+TGG | 0.509213 | 3.4:+63783671 | MS.gene38414:CDS |
| CAGCATTAGAGGAACGGAAA+AGG | 0.510218 | 3.4:+63784474 | MS.gene38414:CDS |
| AATGAATATGTAGGTGGAGA+GGG | 0.514081 | 3.4:+63783142 | MS.gene38414:intron |
| CGACAGTTACAGAGAAATGC+GGG | 0.518524 | 3.4:+63784556 | MS.gene38414:CDS |
| AACACTACCAATACAGCATA+GGG | 0.521717 | 3.4:+63785096 | MS.gene38414:CDS |
| CAGTGCCATAACTTATATGC+TGG | 0.524445 | 3.4:-63783811 | None:intergenic |
| AGATACGCTCTGTGGAGGAT+AGG | 0.527227 | 3.4:+63784522 | MS.gene38414:CDS |
| CAGGTATACGCAAAGATGGT+TGG | 0.532943 | 3.4:+63784865 | MS.gene38414:CDS |
| GTTGGAACTTGCAGGAGTAT+GGG | 0.535986 | 3.4:+63784655 | MS.gene38414:CDS |
| GCAGAAGATGTAAGTTCCAA+AGG | 0.536622 | 3.4:-63783660 | None:intergenic |
| AAACCCTGATGCAATTCTGC+AGG | 0.537767 | 3.4:+63783721 | MS.gene38414:CDS |
| CATGCTGATAAGAGGGGAGA+AGG | 0.538512 | 3.4:+63784890 | MS.gene38414:CDS |
| ATTTGAAGGGAAGAAAGAAT+GGG | 0.545051 | 3.4:+63784721 | MS.gene38414:CDS |
| GATACAGGTATACGCAAAGA+TGG | 0.549876 | 3.4:+63784861 | MS.gene38414:CDS |
| AACTTCCTGAAGAATTTGAA+GGG | 0.551893 | 3.4:+63784708 | MS.gene38414:CDS |
| TCATCACAAAATGGAAGAAG+TGG | 0.551943 | 3.4:-63783367 | None:intergenic |
| GAAAATTGATTAACCAAACC+AGG | 0.558235 | 3.4:-63782270 | None:intergenic |
| AAACACTACCAATACAGCAT+AGG | 0.558238 | 3.4:+63785095 | MS.gene38414:CDS |
| AGCATTGGTAACAATGAACC+TGG | 0.562510 | 3.4:+63782252 | MS.gene38414:CDS |
| ATTTCCAAGCAAATGTGAAG+AGG | 0.565569 | 3.4:+63784633 | MS.gene38414:CDS |
| GAGAACCAAAAGTAACACAT+TGG | 0.565808 | 3.4:-63783289 | None:intergenic |
| GTTGGAACATGCTGATAAGA+GGG | 0.566266 | 3.4:+63784883 | MS.gene38414:CDS |
| CAAAAGTAACACATTGGGGA+TGG | 0.570292 | 3.4:-63783283 | None:intergenic |
| GGTAGGTTTCCATGGCCCAA+AGG | 0.576083 | 3.4:-63783235 | None:intergenic |
| TGCAGTATCACCACCTGAAG+TGG | 0.577481 | 3.4:-63783906 | None:intergenic |
| CAGAAGATGTAAGTTCCAAA+GGG | 0.580677 | 3.4:-63783659 | None:intergenic |
| GAAGTGGTATGCTCAGACAA+CGG | 0.582437 | 3.4:-63783890 | None:intergenic |
| TAATGAATATGTAGGTGGAG+AGG | 0.582489 | 3.4:+63783141 | MS.gene38414:intron |
| AGACACATGGCTTCATCAAG+AGG | 0.582491 | 3.4:+63782000 | None:intergenic |
| TTTGCAGGGCACTCATCTGG+TGG | 0.585914 | 3.4:+63783191 | MS.gene38414:CDS |
| CCTATCCTTAACATCTTCGA+AGG | 0.587211 | 3.4:-63784975 | None:intergenic |
| AGAAGCAAATAGTGTTTGCA+GGG | 0.594581 | 3.4:+63783177 | MS.gene38414:CDS |
| CAGCAGCAGCATTAGAGGAA+CGG | 0.598954 | 3.4:+63784468 | MS.gene38414:CDS |
| CGTGTTTATATGGCTAAAGG+TGG | 0.606548 | 3.4:+63784827 | MS.gene38414:CDS |
| CAAAAGACGAGAGTGGAGCA+AGG | 0.609151 | 3.4:-63783415 | None:intergenic |
| TACCTAACTCCAAAATCTCA+TGG | 0.613362 | 3.4:+63783254 | MS.gene38414:CDS |
| AAGCTGATGATAACTTCTGG+AGG | 0.614993 | 3.4:-63782141 | None:intergenic |
| AGGGTTGCCAGAATTGCCAC+TGG | 0.615205 | 3.4:-63783215 | None:intergenic |
| CGAAAAGATACGCTCTGTGG+AGG | 0.615259 | 3.4:+63784517 | MS.gene38414:CDS |
| GCACTCATCTGGTGGACCAG+TGG | 0.616635 | 3.4:+63783199 | MS.gene38414:CDS |
| TAGTAATTTGCAATATCCAA+AGG | 0.619711 | 3.4:-63784779 | None:intergenic |
| GGACGTGTTTATATGGCTAA+AGG | 0.620483 | 3.4:+63784824 | MS.gene38414:CDS |
| CAAATGCTGCAACTGTCACA+AGG | 0.620723 | 3.4:+63783555 | MS.gene38414:CDS |
| TTTATATGGCTAAAGGTGGA+AGG | 0.627178 | 3.4:+63784831 | MS.gene38414:CDS |
| AGAGGTGCAAGTGAGATCAT+GGG | 0.629840 | 3.4:+63782018 | MS.gene38414:CDS |
| CCATATAAACACGTCCATCA+CGG | 0.630887 | 3.4:-63784817 | None:intergenic |
| ACGAGCGAATCAACTCGTCT+CGG | 0.637998 | 3.4:+63783491 | MS.gene38414:CDS |
| GTAGAAATCTGAAGTTCCAG+TGG | 0.638315 | 3.4:-63783519 | None:intergenic |
| GCTGATAAGAGGGGAGAAGG+AGG | 0.642441 | 3.4:+63784893 | MS.gene38414:CDS |
| CTTTGGTCAAAAGACGAGAG+TGG | 0.642767 | 3.4:-63783422 | None:intergenic |
| AGCTGATGATAACTTCTGGA+GGG | 0.644106 | 3.4:-63782140 | None:intergenic |
| AGACATTCAAGGAACCGTGA+TGG | 0.644212 | 3.4:+63784803 | MS.gene38414:CDS |
| GAACCAAAAGTAACACATTG+GGG | 0.672795 | 3.4:-63783287 | None:intergenic |
| TCTGAGCATACCACTTCAGG+TGG | 0.673021 | 3.4:+63783896 | MS.gene38414:CDS |
| TGACCTGCAGAATTGCATCA+GGG | 0.673677 | 3.4:-63783724 | None:intergenic |
| TATGTTAACTTACCAGACCA+AGG | 0.679199 | 3.4:-63783952 | None:intergenic |
| TCGACAGTTACAGAGAAATG+CGG | 0.685743 | 3.4:+63784555 | MS.gene38414:CDS |
| GGACGAAAAGATACGCTCTG+TGG | 0.700804 | 3.4:+63784514 | MS.gene38414:CDS |
| TTGTAGGCTAATGGGAACAA+CGG | 0.702167 | 3.4:+63783586 | MS.gene38414:CDS |
| TTGGAACATGCTGATAAGAG+GGG | 0.704159 | 3.4:+63784884 | MS.gene38414:CDS |
| AAGACGAGAGTGGAGCAAGG+AGG | 0.708981 | 3.4:-63783412 | None:intergenic |
| TGAGTGCAGAACGAATTGAG+AGG | 0.735544 | 3.4:+63782043 | MS.gene38414:CDS |
| GACAGTTACAGAGAAATGCG+GGG | 0.754062 | 3.4:+63784557 | MS.gene38414:CDS |
| CTAACTCCAAAATCTCATGG+CGG | 0.764578 | 3.4:+63783257 | MS.gene38414:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAATGGTA+TGG | - | chr3.4:63782483-63782502 | None:intergenic | 10.0% |
| !! | TGTCAAAAAAAAAAAAAAAA+TGG | - | chr3.4:63782488-63782507 | None:intergenic | 10.0% |
| !! | TTTATCAAATTTAAGAAAAA+TGG | + | chr3.4:63782710-63782729 | MS.gene38414:intron | 10.0% |
| !! | TTTCTTAAATTTGATAAAAT+AGG | - | chr3.4:63782708-63782727 | None:intergenic | 10.0% |
| !!! | AAAAAGTTCAATTTTAAAAT+GGG | + | chr3.4:63782912-63782931 | MS.gene38414:intron | 10.0% |
| !!! | ATATATTTTAATGAATATGT+AGG | + | chr3.4:63783133-63783152 | MS.gene38414:intron | 10.0% |
| !!! | TTTTTAGCTTTAAAAAAAAA+AGG | + | chr3.4:63782802-63782821 | MS.gene38414:intron | 10.0% |
| !! | AACTAGATCATATATATATA+TGG | - | chr3.4:63782386-63782405 | None:intergenic | 15.0% |
| !! | AATTTGTGAATTTGATAAAA+TGG | + | chr3.4:63782943-63782962 | MS.gene38414:intron | 15.0% |
| !! | ACACAAAAATTAAATGTTTA+AGG | - | chr3.4:63784101-63784120 | None:intergenic | 15.0% |
| !! | ATTGTAGAAAGTAAAAATAT+TGG | + | chr3.4:63782660-63782679 | MS.gene38414:intron | 15.0% |
| !!! | AAAAGTTCAATTTTAAAATG+GGG | + | chr3.4:63782913-63782932 | MS.gene38414:intron | 15.0% |
| !!! | AAATAGATTAAGATCTATTT+TGG | - | chr3.4:63782220-63782239 | None:intergenic | 15.0% |
| !!! | ATCAATTAAACTAATTGTTT+TGG | - | chr3.4:63782556-63782575 | None:intergenic | 15.0% |
| !!! | CAAAAAGTTCAATTTTAAAA+TGG | + | chr3.4:63782911-63782930 | MS.gene38414:intron | 15.0% |
| !!! | CATATTACTCTTTTTTTTAA+TGG | + | chr3.4:63784327-63784346 | MS.gene38414:intron | 15.0% |
| !!! | TTAAATGTTTAAGGTTTTTT+AGG | - | chr3.4:63784092-63784111 | None:intergenic | 15.0% |
| !! | AACATATTTATCCTTATCTA+TGG | + | chr3.4:63783969-63783988 | MS.gene38414:intron | 20.0% |
| !! | AATATGTGATTTCCAATTAA+AGG | - | chr3.4:63783314-63783333 | None:intergenic | 20.0% |
| !! | AATATTTGAGCATATCATTT+AGG | - | chr3.4:63782598-63782617 | None:intergenic | 20.0% |
| !! | AATTGCAAATAAATCAAACA+TGG | + | chr3.4:63782974-63782993 | MS.gene38414:intron | 20.0% |
| !! | CTTAAAAAAATAGTGATTGT+TGG | - | chr3.4:63782838-63782857 | None:intergenic | 20.0% |
| !! | CTTAAATTTGATAAAATAGG+AGG | - | chr3.4:63782705-63782724 | None:intergenic | 20.0% |
| !!! | AATGTTACATTCTTTATTTG+AGG | + | chr3.4:63783105-63783124 | MS.gene38414:intron | 20.0% |
| !!! | ATTTAATTTCCTTCAAGTTT+AGG | - | chr3.4:63784231-63784250 | None:intergenic | 20.0% |
| !!! | CAACAATCACTATTTTTTTA+AGG | + | chr3.4:63782836-63782855 | MS.gene38414:intron | 20.0% |
| !!! | GTTTGATTTATTTGCAATTT+TGG | - | chr3.4:63782973-63782992 | None:intergenic | 20.0% |
| !!! | TAATACTTTTATGTGTTAGT+TGG | + | chr3.4:63784204-63784223 | MS.gene38414:intron | 20.0% |
| !!! | TATTTTAATGAATATGTAGG+TGG | + | chr3.4:63783136-63783155 | MS.gene38414:intron | 20.0% |
| !!! | TTTTTTAATGGAAGAGAAAA+TGG | + | chr3.4:63784339-63784358 | MS.gene38414:intron | 20.0% |
| ! | ACTTTCTACAATTATCGAAA+AGG | - | chr3.4:63782652-63782671 | None:intergenic | 25.0% |
| ! | CAAATTACTATAGACATTCA+AGG | + | chr3.4:63784792-63784811 | MS.gene38414:CDS | 25.0% |
| ! | GACAACAAATGTAATAATTG+AGG | - | chr3.4:63782763-63782782 | None:intergenic | 25.0% |
| ! | TATATATGGTTAAGATAGAG+AGG | - | chr3.4:63782372-63782391 | None:intergenic | 25.0% |
| ! | TTGTGAATTTGATAAAATGG+AGG | + | chr3.4:63782946-63782965 | MS.gene38414:intron | 25.0% |
| !! | AATAATCACATTGATTGACT+TGG | + | chr3.4:63784025-63784044 | MS.gene38414:intron | 25.0% |
| !! | TAGTAATTTGCAATATCCAA+AGG | - | chr3.4:63784782-63784801 | None:intergenic | 25.0% |
| !! | TTATTCAGAATCATGCTTTT+GGG | + | chr3.4:63784916-63784935 | MS.gene38414:CDS | 25.0% |
| !! | TTCTGTTGTTCTTTTCTATA+AGG | - | chr3.4:63782116-63782135 | None:intergenic | 25.0% |
| !!! | AAATGTTTTGAGTGAATATG+CGG | - | chr3.4:63784054-63784073 | None:intergenic | 25.0% |
| !!! | ATCATATGGATTTGTTAGAA+AGG | + | chr3.4:63783077-63783096 | MS.gene38414:intron | 25.0% |
| !!! | ATTGGTTTGATTACAAGTTT+TGG | + | chr3.4:63782678-63782697 | MS.gene38414:intron | 25.0% |
| !!! | TAAGAATAGTAAAGTTGGTA+AGG | + | chr3.4:63785033-63785052 | MS.gene38414:CDS | 25.0% |
| AAAATCTTGAAGCTGAATGT+TGG | + | chr3.4:63783842-63783861 | MS.gene38414:CDS | 30.0% | |
| AAATCTTGAAGCTGAATGTT+GGG | + | chr3.4:63783843-63783862 | MS.gene38414:CDS | 30.0% | |
| AACTTCCTGAAGAATTTGAA+GGG | + | chr3.4:63784708-63784727 | MS.gene38414:CDS | 30.0% | |
| AAGGAACAACGAAAAAAGTA+TGG | + | chr3.4:63784493-63784512 | MS.gene38414:CDS | 30.0% | |
| AATGGTATGGATGCTATAAA+AGG | - | chr3.4:63782470-63782489 | None:intergenic | 30.0% | |
| AATTTGAAGGGAAGAAAGAA+TGG | + | chr3.4:63784720-63784739 | MS.gene38414:CDS | 30.0% | |
| AGAACCAAAAGTAACACATT+GGG | - | chr3.4:63783291-63783310 | None:intergenic | 30.0% | |
| AGCTAAAGCTCTATTTAGAA+TGG | - | chr3.4:63784260-63784279 | None:intergenic | 30.0% | |
| ATTTGAAGGGAAGAAAGAAT+GGG | + | chr3.4:63784721-63784740 | MS.gene38414:CDS | 30.0% | |
| CTCGTTAAAGATTTGTCTTT+AGG | - | chr3.4:63783476-63783495 | None:intergenic | 30.0% | |
| GAAAATTGATTAACCAAACC+AGG | - | chr3.4:63782273-63782292 | None:intergenic | 30.0% | |
| TGGAGTAAGAATAGTAAAGT+TGG | + | chr3.4:63785028-63785047 | MS.gene38414:CDS | 30.0% | |
| TGTCATATCTCATCACAAAA+TGG | - | chr3.4:63783379-63783398 | None:intergenic | 30.0% | |
| ! | ACATATTTTCTCATGCTACA+AGG | + | chr3.4:63783327-63783346 | MS.gene38414:CDS | 30.0% |
| ! | GTCATTTAAAGCTGTGTTAA+TGG | - | chr3.4:63783933-63783952 | None:intergenic | 30.0% |
| ! | GTTATTCAGAATCATGCTTT+TGG | + | chr3.4:63784915-63784934 | MS.gene38414:CDS | 30.0% |
| ! | TTTCCTTCACTTAAAAGCAT+TGG | + | chr3.4:63782237-63782256 | MS.gene38414:CDS | 30.0% |
| !! | AAGAAAGAATGGGTTGAAAT+AGG | + | chr3.4:63784731-63784750 | MS.gene38414:CDS | 30.0% |
| !! | TTACCAATGCTTTTAAGTGA+AGG | - | chr3.4:63782243-63782262 | None:intergenic | 30.0% |
| !!! | ACTTTTGGTTCTCCTTTAAT+TGG | + | chr3.4:63783299-63783318 | MS.gene38414:CDS | 30.0% |
| !!! | ATCTATTTTGGTTTCACCAA+AGG | - | chr3.4:63782208-63782227 | None:intergenic | 30.0% |
| !!! | CATTTTTAGCATCAGTAGAT+AGG | - | chr3.4:63782531-63782550 | None:intergenic | 30.0% |
| !!! | TTGTTTTGGAATACCAATCT+TGG | - | chr3.4:63782185-63782204 | None:intergenic | 30.0% |
| !!! | TTTTTTAAGGCCAAAAGTCA+AGG | + | chr3.4:63782849-63782868 | MS.gene38414:intron | 30.0% |
| AAACACTACCAATACAGCAT+AGG | + | chr3.4:63785095-63785114 | MS.gene38414:CDS | 35.0% | |
| AAAGTCCTTCGAAGATGTTA+AGG | + | chr3.4:63784970-63784989 | MS.gene38414:CDS | 35.0% | |
| AACACTACCAATACAGCATA+GGG | + | chr3.4:63785096-63785115 | MS.gene38414:CDS | 35.0% | |
| AAGGGTCTATAAGGACTAAA+AGG | - | chr3.4:63783644-63783663 | None:intergenic | 35.0% | |
| AATGAATATGTAGGTGGAGA+GGG | + | chr3.4:63783142-63783161 | MS.gene38414:intron | 35.0% | |
| AGAAGCAAATAGTGTTTGCA+GGG | + | chr3.4:63783177-63783196 | MS.gene38414:CDS | 35.0% | |
| ATGACTTTGCCAAAATCTCT+TGG | - | chr3.4:63782308-63782327 | None:intergenic | 35.0% | |
| ATGCTACAAGGAGAGAAAAT+TGG | + | chr3.4:63783339-63783358 | MS.gene38414:CDS | 35.0% | |
| ATTTCCAAGCAAATGTGAAG+AGG | + | chr3.4:63784633-63784652 | MS.gene38414:CDS | 35.0% | |
| CACATTTGCTTGGAAATCAT+CGG | - | chr3.4:63784630-63784649 | None:intergenic | 35.0% | |
| CAGAAGATGTAAGTTCCAAA+GGG | - | chr3.4:63783662-63783681 | None:intergenic | 35.0% | |
| CATCAGTAGATAGGATAGTT+AGG | - | chr3.4:63782522-63782541 | None:intergenic | 35.0% | |
| CCAAAATCTCTTGGAATCTT+TGG | - | chr3.4:63782299-63782318 | None:intergenic | 35.0% | |
| CTTCGAAGATGTTAAGGATA+GGG | + | chr3.4:63784976-63784995 | MS.gene38414:CDS | 35.0% | |
| GAACACAAAAGCCATAGATA+AGG | - | chr3.4:63783983-63784002 | None:intergenic | 35.0% | |
| GAACCAAAAGTAACACATTG+GGG | - | chr3.4:63783290-63783309 | None:intergenic | 35.0% | |
| GAACTTCCTGAAGAATTTGA+AGG | + | chr3.4:63784707-63784726 | MS.gene38414:CDS | 35.0% | |
| GAGAACCAAAAGTAACACAT+TGG | - | chr3.4:63783292-63783311 | None:intergenic | 35.0% | |
| GTCATCATCATTCAAAGATC+AGG | + | chr3.4:63782323-63782342 | MS.gene38414:CDS | 35.0% | |
| GTGAAACTGCTTCAAATCTT+TGG | - | chr3.4:63783442-63783461 | None:intergenic | 35.0% | |
| TAAGTTCCAAAGGGTCTATA+AGG | - | chr3.4:63783653-63783672 | None:intergenic | 35.0% | |
| TAATGAATATGTAGGTGGAG+AGG | + | chr3.4:63783141-63783160 | MS.gene38414:intron | 35.0% | |
| TACAAAGAGGAAATCTCACA+TGG | - | chr3.4:63782626-63782645 | None:intergenic | 35.0% | |
| TACCTAACTCCAAAATCTCA+TGG | + | chr3.4:63783254-63783273 | MS.gene38414:CDS | 35.0% | |
| TATGTTAACTTACCAGACCA+AGG | - | chr3.4:63783955-63783974 | None:intergenic | 35.0% | |
| TCATCACAAAATGGAAGAAG+TGG | - | chr3.4:63783370-63783389 | None:intergenic | 35.0% | |
| TCTATAAGGTAGTGTCTATC+TGG | - | chr3.4:63782102-63782121 | None:intergenic | 35.0% | |
| TGGGATCAAAATTGCAACAA+AGG | + | chr3.4:63782873-63782892 | MS.gene38414:intron | 35.0% | |
| TGGTATTCCAAAACAACCTT+TGG | + | chr3.4:63782189-63782208 | MS.gene38414:CDS | 35.0% | |
| TTAGTTGGACCTAAACTTGA+AGG | + | chr3.4:63784219-63784238 | MS.gene38414:intron | 35.0% | |
| TTCTTCCCTTCAAATTCTTC+AGG | - | chr3.4:63784716-63784735 | None:intergenic | 35.0% | |
| TTTAGTCCTTATAGACCCTT+TGG | + | chr3.4:63783644-63783663 | MS.gene38414:CDS | 35.0% | |
| TTTATATGGCTAAAGGTGGA+AGG | + | chr3.4:63784831-63784850 | MS.gene38414:CDS | 35.0% | |
| ! | AGTTCAAGCTCGACTATTTT+AGG | - | chr3.4:63783011-63783030 | None:intergenic | 35.0% |
| ! | ATAAGTTATGGCACTGAACT+AGG | + | chr3.4:63783818-63783837 | MS.gene38414:CDS | 35.0% |
| ! | CCAAAGATTCCAAGAGATTT+TGG | + | chr3.4:63782296-63782315 | MS.gene38414:CDS | 35.0% |
| ! | TGCGTATACCTGTATCTTTT+TGG | - | chr3.4:63784857-63784876 | None:intergenic | 35.0% |
| !! | AACACAGCTTTAAATGACCT+TGG | + | chr3.4:63783935-63783954 | MS.gene38414:CDS | 35.0% |
| !! | ACAACGGAAGATTTTCTAGT+TGG | - | chr3.4:63783877-63783896 | None:intergenic | 35.0% |
| !! | AGGGTTCTACTTTTGTTAAG+TGG | + | chr3.4:63785068-63785087 | MS.gene38414:CDS | 35.0% |
| !! | ATCGAAAAGGTACTACAAAG+AGG | - | chr3.4:63782639-63782658 | None:intergenic | 35.0% |
| !! | GTTCTACTTTTGTTAAGTGG+TGG | + | chr3.4:63785071-63785090 | MS.gene38414:CDS | 35.0% |
| !!! | AGTTGGTAAGGATGTGTTTT+TGG | + | chr3.4:63785045-63785064 | MS.gene38414:CDS | 35.0% |
| !!! | ATGAGATTTTGGAGTTAGGT+AGG | - | chr3.4:63783255-63783274 | None:intergenic | 35.0% |
| !!! | TAAGGATAGGGTTTTGAAGT+TGG | + | chr3.4:63784988-63785007 | MS.gene38414:CDS | 35.0% |
| AAGCTGATGATAACTTCTGG+AGG | - | chr3.4:63782144-63782163 | None:intergenic | 40.0% | |
| AGCTGATGATAACTTCTGGA+GGG | - | chr3.4:63782143-63782162 | None:intergenic | 40.0% | |
| AGGTTACTACGATGCATTCA+AGG | + | chr3.4:63784592-63784611 | MS.gene38414:CDS | 40.0% | |
| CAAAAGTAACACATTGGGGA+TGG | - | chr3.4:63783286-63783305 | None:intergenic | 40.0% | |
| CAGAAGCAAATAGTGTTTGC+AGG | + | chr3.4:63783176-63783195 | MS.gene38414:CDS | 40.0% | |
| CAGTGCCATAACTTATATGC+TGG | - | chr3.4:63783814-63783833 | None:intergenic | 40.0% | |
| CCATATAAACACGTCCATCA+CGG | - | chr3.4:63784820-63784839 | None:intergenic | 40.0% | |
| CCTATCCTTAACATCTTCGA+AGG | - | chr3.4:63784978-63784997 | None:intergenic | 40.0% | |
| CCTTCGAAGATGTTAAGGAT+AGG | + | chr3.4:63784975-63784994 | MS.gene38414:CDS | 40.0% | |
| CGTGTTTATATGGCTAAAGG+TGG | + | chr3.4:63784827-63784846 | MS.gene38414:CDS | 40.0% | |
| CTAACTCCAAAATCTCATGG+CGG | + | chr3.4:63783257-63783276 | MS.gene38414:CDS | 40.0% | |
| GATACAGGTATACGCAAAGA+TGG | + | chr3.4:63784861-63784880 | MS.gene38414:CDS | 40.0% | |
| GATTCTTCCCTATGCTGTAT+TGG | - | chr3.4:63785106-63785125 | None:intergenic | 40.0% | |
| GCAGAAGATGTAAGTTCCAA+AGG | - | chr3.4:63783663-63783682 | None:intergenic | 40.0% | |
| GCTCACTGTCAAAGATCATA+TGG | + | chr3.4:63783063-63783082 | MS.gene38414:intron | 40.0% | |
| GGAAAGCTGATGATAACTTC+TGG | - | chr3.4:63782147-63782166 | None:intergenic | 40.0% | |
| GGACGTGTTTATATGGCTAA+AGG | + | chr3.4:63784824-63784843 | MS.gene38414:CDS | 40.0% | |
| GTTGGAACATGCTGATAAGA+GGG | + | chr3.4:63784883-63784902 | MS.gene38414:CDS | 40.0% | |
| TACATCTTCTGCACTACAAG+TGG | + | chr3.4:63783671-63783690 | MS.gene38414:CDS | 40.0% | |
| TCGACAGTTACAGAGAAATG+CGG | + | chr3.4:63784555-63784574 | MS.gene38414:CDS | 40.0% | |
| TGGAGGAACAGATAAGTGAT+TGG | + | chr3.4:63785008-63785027 | MS.gene38414:CDS | 40.0% | |
| TGGTAACAATGAACCTGGTT+TGG | + | chr3.4:63782257-63782276 | MS.gene38414:CDS | 40.0% | |
| TTGGAACATGCTGATAAGAG+GGG | + | chr3.4:63784884-63784903 | MS.gene38414:CDS | 40.0% | |
| TTGTAGGCTAATGGGAACAA+CGG | + | chr3.4:63783586-63783605 | MS.gene38414:CDS | 40.0% | |
| ! | CATCAGGTGTTTTCCAAGAT+TGG | + | chr3.4:63782169-63782188 | MS.gene38414:CDS | 40.0% |
| ! | GGTTTCACCAAAGGTTGTTT+TGG | - | chr3.4:63782199-63782218 | None:intergenic | 40.0% |
| ! | GTAGAAATCTGAAGTTCCAG+TGG | - | chr3.4:63783522-63783541 | None:intergenic | 40.0% |
| ! | TAGAAGACTAGTTGAGCCTT+TGG | + | chr3.4:63784763-63784782 | MS.gene38414:CDS | 40.0% |
| !! | AGCATTGGTAACAATGAACC+TGG | + | chr3.4:63782252-63782271 | MS.gene38414:CDS | 40.0% |
| !! | AGCTTTAAATGACCTTGGTC+TGG | + | chr3.4:63783940-63783959 | MS.gene38414:CDS | 40.0% |
| !!! | CATCCCCAATGTGTTACTTT+TGG | + | chr3.4:63783284-63783303 | MS.gene38414:CDS | 40.0% |
| !!! | GGTAAGGATGTGTTTTTGGA+GGG | + | chr3.4:63785049-63785068 | MS.gene38414:CDS | 40.0% |
| !!! | TGGTAAGGATGTGTTTTTGG+AGG | + | chr3.4:63785048-63785067 | MS.gene38414:CDS | 40.0% |
| AAACCCTGATGCAATTCTGC+AGG | + | chr3.4:63783721-63783740 | MS.gene38414:CDS | 45.0% | |
| AGACATTCAAGGAACCGTGA+TGG | + | chr3.4:63784803-63784822 | MS.gene38414:CDS | 45.0% | |
| ATCATCAGCTTTCCAGCATC+AGG | + | chr3.4:63782153-63782172 | MS.gene38414:CDS | 45.0% | |
| ATGACCTGCAGAATTGCATC+AGG | - | chr3.4:63783728-63783747 | None:intergenic | 45.0% | |
| ATGCGGGGACATCAGAAAAA+AGG | + | chr3.4:63784572-63784591 | MS.gene38414:CDS | 45.0% | |
| CAAATGCTGCAACTGTCACA+AGG | + | chr3.4:63783555-63783574 | MS.gene38414:CDS | 45.0% | |
| CAGCATTAGAGGAACGGAAA+AGG | + | chr3.4:63784474-63784493 | MS.gene38414:CDS | 45.0% | |
| CAGGTATACGCAAAGATGGT+TGG | + | chr3.4:63784865-63784884 | MS.gene38414:CDS | 45.0% | |
| CCAACCTCTTCACATTTGCT+TGG | - | chr3.4:63784640-63784659 | None:intergenic | 45.0% | |
| CCAAGCAAATGTGAAGAGGT+TGG | + | chr3.4:63784637-63784656 | MS.gene38414:CDS | 45.0% | |
| CGACAGTTACAGAGAAATGC+GGG | + | chr3.4:63784556-63784575 | MS.gene38414:CDS | 45.0% | |
| CTGCGCCAGCATATAAGTTA+TGG | + | chr3.4:63783806-63783825 | MS.gene38414:CDS | 45.0% | |
| CTTTGGTCAAAAGACGAGAG+TGG | - | chr3.4:63783425-63783444 | None:intergenic | 45.0% | |
| GAAGTGGTATGCTCAGACAA+CGG | - | chr3.4:63783893-63783912 | None:intergenic | 45.0% | |
| GACAGTTACAGAGAAATGCG+GGG | + | chr3.4:63784557-63784576 | MS.gene38414:CDS | 45.0% | |
| GGTTGGAACATGCTGATAAG+AGG | + | chr3.4:63784882-63784901 | MS.gene38414:CDS | 45.0% | |
| GTGGAAGGCCAAAAAGATAC+AGG | + | chr3.4:63784846-63784865 | MS.gene38414:CDS | 45.0% | |
| TAAGGCCAAAAGTCAAGGCT+GGG | + | chr3.4:63782854-63782873 | MS.gene38414:intron | 45.0% | |
| TCTTGGAAAACACCTGATGC+TGG | - | chr3.4:63782168-63782187 | None:intergenic | 45.0% | |
| TGACCTGCAGAATTGCATCA+GGG | - | chr3.4:63783727-63783746 | None:intergenic | 45.0% | |
| TGAGTGCAGAACGAATTGAG+AGG | + | chr3.4:63782043-63782062 | MS.gene38414:CDS | 45.0% | |
| TGGAGTTAGGTAGGTTTCCA+TGG | - | chr3.4:63783246-63783265 | None:intergenic | 45.0% | |
| TTAAGGCCAAAAGTCAAGGC+TGG | + | chr3.4:63782853-63782872 | MS.gene38414:intron | 45.0% | |
| TTGTCTGAGCATACCACTTC+AGG | + | chr3.4:63783893-63783912 | MS.gene38414:CDS | 45.0% | |
| ! | AAGAGGTGCAAGTGAGATCA+TGG | + | chr3.4:63782017-63782036 | MS.gene38414:CDS | 45.0% |
| ! | AGAATCATGCTTTTGGGCTG+AGG | + | chr3.4:63784922-63784941 | MS.gene38414:CDS | 45.0% |
| ! | AGAGGTGCAAGTGAGATCAT+GGG | + | chr3.4:63782018-63782037 | MS.gene38414:CDS | 45.0% |
| ! | ATGCTGGCGCAGACTTTTAT+CGG | - | chr3.4:63783798-63783817 | None:intergenic | 45.0% |
| ! | CATGCTGCTTGTAGGCTAAT+GGG | + | chr3.4:63783578-63783597 | MS.gene38414:CDS | 45.0% |
| ! | GTTGGAACTTGCAGGAGTAT+GGG | + | chr3.4:63784655-63784674 | MS.gene38414:CDS | 45.0% |
| ! | TGGATTCCGCCATGAGATTT+TGG | - | chr3.4:63783266-63783285 | None:intergenic | 45.0% |
| ! | TTGATCCCAGCCTTGACTTT+TGG | - | chr3.4:63782862-63782881 | None:intergenic | 45.0% |
| !! | CCGTGATGGACGTGTTTATA+TGG | + | chr3.4:63784817-63784836 | MS.gene38414:CDS | 45.0% |
| !!! | CGCCATGAGATTTTGGAGTT+AGG | - | chr3.4:63783259-63783278 | None:intergenic | 45.0% |
| !!! | GGATAGGGTTTTGAAGTTGG+AGG | + | chr3.4:63784991-63785010 | MS.gene38414:CDS | 45.0% |
| ACGAGCGAATCAACTCGTCT+CGG | + | chr3.4:63783491-63783510 | MS.gene38414:CDS | 50.0% | |
| AGATACGCTCTGTGGAGGAT+AGG | + | chr3.4:63784522-63784541 | MS.gene38414:CDS | 50.0% | |
| AGTGGAGCAAGGAGGATTCT+TGG | - | chr3.4:63783407-63783426 | None:intergenic | 50.0% | |
| CAAAAGACGAGAGTGGAGCA+AGG | - | chr3.4:63783418-63783437 | None:intergenic | 50.0% | |
| CAGCAGCAGCATTAGAGGAA+CGG | + | chr3.4:63784468-63784487 | MS.gene38414:CDS | 50.0% | |
| CATGCTGATAAGAGGGGAGA+AGG | + | chr3.4:63784890-63784909 | MS.gene38414:CDS | 50.0% | |
| CGAAAAGATACGCTCTGTGG+AGG | + | chr3.4:63784517-63784536 | MS.gene38414:CDS | 50.0% | |
| GGACGAAAAGATACGCTCTG+TGG | + | chr3.4:63784514-63784533 | MS.gene38414:CDS | 50.0% | |
| GGCAATTCTGGCAACCCTTT+GGG | + | chr3.4:63783220-63783239 | MS.gene38414:CDS | 50.0% | |
| GGTTGGAACTTGCAGGAGTA+TGG | + | chr3.4:63784654-63784673 | MS.gene38414:CDS | 50.0% | |
| GTAGGTTTCCATGGCCCAAA+GGG | - | chr3.4:63783237-63783256 | None:intergenic | 50.0% | |
| GTGAAGAGGTTGGAACTTGC+AGG | + | chr3.4:63784647-63784666 | MS.gene38414:CDS | 50.0% | |
| TCAAGCAGCAGCAGCATTAG+AGG | + | chr3.4:63784463-63784482 | MS.gene38414:CDS | 50.0% | |
| TCTGAGCATACCACTTCAGG+TGG | + | chr3.4:63783896-63783915 | MS.gene38414:CDS | 50.0% | |
| TGCAGTATCACCACCTGAAG+TGG | - | chr3.4:63783909-63783928 | None:intergenic | 50.0% | |
| TGGCAATTCTGGCAACCCTT+TGG | + | chr3.4:63783219-63783238 | MS.gene38414:CDS | 50.0% | |
| TGGTGTCTTGTGAGCCTTCA+AGG | - | chr3.4:63782082-63782101 | None:intergenic | 50.0% | |
| ! | ATCATGCTTTTGGGCTGAGG+TGG | + | chr3.4:63784925-63784944 | MS.gene38414:CDS | 50.0% |
| ! | GCATGCTGCTTGTAGGCTAA+TGG | + | chr3.4:63783577-63783596 | MS.gene38414:CDS | 50.0% |
| ! | TCACAAGGCATGCTGCTTGT+AGG | + | chr3.4:63783570-63783589 | MS.gene38414:CDS | 50.0% |
| AAGACGAGAGTGGAGCAAGG+AGG | - | chr3.4:63783415-63783434 | None:intergenic | 55.0% | |
| AGGGTTGCCAGAATTGCCAC+TGG | - | chr3.4:63783218-63783237 | None:intergenic | 55.0% | |
| GCTGATAAGAGGGGAGAAGG+AGG | + | chr3.4:63784893-63784912 | MS.gene38414:CDS | 55.0% | |
| GGTAGGTTTCCATGGCCCAA+AGG | - | chr3.4:63783238-63783257 | None:intergenic | 55.0% | |
| ! | ATGCTTTTGGGCTGAGGTGG+AGG | + | chr3.4:63784928-63784947 | MS.gene38414:CDS | 55.0% |
| ! | GTGTTTGCAGGGCACTCATC+TGG | + | chr3.4:63783188-63783207 | MS.gene38414:CDS | 55.0% |
| ! | TGGTGGACCAGTGGCAATTC+TGG | + | chr3.4:63783208-63783227 | MS.gene38414:CDS | 55.0% |
| ! | TTTGCAGGGCACTCATCTGG+TGG | + | chr3.4:63783191-63783210 | MS.gene38414:CDS | 55.0% |
| ACTCGTCTCGGAAGAGCCAC+TGG | + | chr3.4:63783503-63783522 | MS.gene38414:CDS | 60.0% | |
| GTCACGTGCTGCGTCCTTGA+AGG | + | chr3.4:63782065-63782084 | MS.gene38414:CDS | 60.0% | |
| TCTGGCAACCCTTTGGGCCA+TGG | + | chr3.4:63783226-63783245 | MS.gene38414:CDS | 60.0% | |
| ! | GCACTCATCTGGTGGACCAG+TGG | + | chr3.4:63783199-63783218 | MS.gene38414:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 63782006 | 63785153 | 63782006 | ID=MS.gene38414 |
| chr3.4 | mRNA | 63782006 | 63785153 | 63782006 | ID=MS.gene38414.t1;Parent=MS.gene38414 |
| chr3.4 | exon | 63782006 | 63782344 | 63782006 | ID=MS.gene38414.t1.exon1;Parent=MS.gene38414.t1 |
| chr3.4 | CDS | 63782006 | 63782344 | 63782006 | ID=cds.MS.gene38414.t1;Parent=MS.gene38414.t1 |
| chr3.4 | exon | 63783155 | 63783961 | 63783155 | ID=MS.gene38414.t1.exon2;Parent=MS.gene38414.t1 |
| chr3.4 | CDS | 63783155 | 63783961 | 63783155 | ID=cds.MS.gene38414.t1;Parent=MS.gene38414.t1 |
| chr3.4 | exon | 63784440 | 63785153 | 63784440 | ID=MS.gene38414.t1.exon3;Parent=MS.gene38414.t1 |
| chr3.4 | CDS | 63784440 | 63785153 | 63784440 | ID=cds.MS.gene38414.t1;Parent=MS.gene38414.t1 |
| Gene Sequence |
| Protein sequence |
