Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38404.t1 | XP_013461062.1 | 66.7 | 619 | 140 | 3 | 1 | 554 | 1 | 618 | 5.90E-224 | 786.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38404.t1 | Q9SU72 | 38.7 | 537 | 265 | 9 | 49 | 550 | 107 | 614 | 7.8e-92 | 339.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38404.t1 | A0A072V056 | 66.7 | 619 | 140 | 3 | 1 | 554 | 1 | 618 | 4.3e-224 | 786.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38404 | MS.gene42360 | PPI |
| MS.gene38404 | MS.gene38414 | PPI |
| MS.gene38404 | MS.gene25909 | PPI |
| MS.gene38404 | MS.gene044112 | PPI |
| MS.gene38404 | MS.gene022252 | PPI |
| MS.gene38404 | MS.gene38399 | PPI |
| MS.gene38404 | MS.gene38408 | PPI |
| MS.gene38404 | MS.gene062716 | PPI |
| MS.gene38404 | MS.gene014545 | PPI |
| MS.gene38404 | MS.gene38392 | PPI |
| MS.gene38404 | MS.gene24315 | PPI |
| MS.gene38404 | MS.gene26931 | PPI |
| MS.gene38404 | MS.gene25879 | PPI |
| MS.gene38404 | MS.gene69123 | PPI |
| MS.gene38404 | MS.gene27345 | PPI |
| MS.gene38404 | MS.gene70582 | PPI |
| MS.gene25879 | MS.gene38404 | PPI |
| MS.gene38404 | MS.gene022225 | PPI |
| MS.gene38404 | MS.gene074397 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38404.t1 | MTR_3g078633 | 77.559 | 508 | 112 | 2 | 48 | 554 | 112 | 618 | 0.0 | 823 |
| MS.gene38404.t1 | MTR_3g078633 | 73.469 | 49 | 13 | 0 | 1 | 49 | 1 | 49 | 2.73e-14 | 76.3 |
| MS.gene38404.t1 | MTR_3g078633 | 76.054 | 522 | 123 | 2 | 34 | 554 | 26 | 546 | 0.0 | 822 |
| MS.gene38404.t1 | MTR_3g079340 | 53.950 | 519 | 212 | 9 | 48 | 554 | 113 | 616 | 0.0 | 540 |
| MS.gene38404.t1 | MTR_3g081450 | 81.818 | 99 | 18 | 0 | 443 | 541 | 32 | 130 | 6.03e-53 | 178 |
| MS.gene38404.t1 | MTR_8g494200 | 26.654 | 514 | 301 | 18 | 57 | 534 | 130 | 603 | 2.20e-44 | 167 |
| MS.gene38404.t1 | MTR_3g467360 | 25.634 | 355 | 208 | 13 | 213 | 535 | 215 | 545 | 1.47e-23 | 105 |
| MS.gene38404.t1 | MTR_3g467360 | 25.634 | 355 | 208 | 13 | 213 | 535 | 209 | 539 | 1.59e-23 | 105 |
| MS.gene38404.t1 | MTR_0095s0020 | 26.765 | 340 | 191 | 13 | 57 | 378 | 155 | 454 | 4.06e-22 | 100 |
| MS.gene38404.t1 | MTR_6g007985 | 25.208 | 361 | 209 | 14 | 215 | 540 | 136 | 470 | 9.08e-21 | 95.9 |
| MS.gene38404.t1 | MTR_6g008015 | 25.208 | 361 | 209 | 14 | 215 | 540 | 213 | 547 | 1.00e-20 | 96.3 |
| MS.gene38404.t1 | MTR_6g007975 | 24.033 | 362 | 203 | 14 | 215 | 536 | 213 | 542 | 1.96e-19 | 92.4 |
| MS.gene38404.t1 | MTR_6g008055 | 24.931 | 361 | 199 | 16 | 215 | 536 | 213 | 540 | 1.03e-17 | 87.0 |
| MS.gene38404.t1 | MTR_6g007980 | 24.370 | 357 | 210 | 13 | 213 | 535 | 209 | 539 | 8.20e-17 | 84.0 |
| MS.gene38404.t1 | MTR_6g007980 | 24.581 | 358 | 209 | 13 | 213 | 535 | 209 | 540 | 1.17e-16 | 83.6 |
| MS.gene38404.t1 | MTR_6g007980 | 24.513 | 359 | 209 | 13 | 213 | 535 | 209 | 541 | 1.22e-16 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38404.t1 | AT3G48090 | 40.485 | 536 | 255 | 9 | 52 | 552 | 2 | 508 | 8.62e-124 | 374 |
| MS.gene38404.t1 | AT3G48090 | 40.631 | 539 | 256 | 9 | 49 | 552 | 107 | 616 | 1.23e-123 | 377 |
| MS.gene38404.t1 | AT3G48080 | 39.848 | 527 | 263 | 11 | 49 | 543 | 107 | 611 | 3.05e-120 | 368 |
| MS.gene38404.t1 | AT3G52430 | 26.059 | 307 | 178 | 10 | 205 | 487 | 175 | 456 | 7.30e-23 | 102 |
| MS.gene38404.t1 | AT5G14930 | 28.959 | 221 | 126 | 8 | 342 | 536 | 293 | 508 | 5.54e-16 | 81.3 |
Find 120 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGTCTTGTGAGCCTTTA+AGG | 0.163308 | 3.4:-63991845 | None:intergenic |
| TTCTTCCCTTCAAATTCTTC+TGG | 0.223579 | 3.4:-63994829 | None:intergenic |
| GTCATTTAAAGCTGTGTTAA+TGG | 0.225012 | 3.4:-63994032 | None:intergenic |
| TGGATACCGCCATGAGATTT+TGG | 0.228582 | 3.4:-63993365 | None:intergenic |
| CATCCCCAATGTGTTACTTT+TGG | 0.245116 | 3.4:+63993386 | MS.gene38404:CDS |
| GTTATTCGGAATCATGCTTT+TGG | 0.254796 | 3.4:+63995031 | MS.gene38404:CDS |
| GTGAAACTGCTTCAAATCTT+TGG | 0.255939 | 3.4:-63993541 | None:intergenic |
| AATATGTGATCTCCTATTAA+AGG | 0.264992 | 3.4:-63993413 | None:intergenic |
| GGCTAGAACTTGCAGGAGTA+TGG | 0.273354 | 3.4:+63994770 | MS.gene38404:CDS |
| TGGTGGACCAGTGGCAATTC+TGG | 0.279377 | 3.4:+63993310 | MS.gene38404:CDS |
| CTCGTTAAAGATTTGTCTTT+AGG | 0.287937 | 3.4:-63993575 | None:intergenic |
| CCGTGATGGACGTGTTTATA+TGG | 0.287982 | 3.4:+63994933 | MS.gene38404:CDS |
| GTCTCTTGCTGCGTCCTTAA+AGG | 0.312963 | 3.4:+63991831 | MS.gene38404:CDS |
| GAGAGGAGAAGGAGGTTATT+CGG | 0.313839 | 3.4:+63995017 | MS.gene38404:CDS |
| TGGCAATTCTGGCAACCCTT+TGG | 0.317237 | 3.4:+63993321 | MS.gene38404:CDS |
| AAGGGTCTATAAGGACTAAA+AGG | 0.332391 | 3.4:-63993743 | None:intergenic |
| GGCAATTCTGGCAACCCTTT+GGG | 0.345081 | 3.4:+63993322 | MS.gene38404:CDS |
| TGTCATATCTCATCACAAAA+TGG | 0.352184 | 3.4:-63993478 | None:intergenic |
| GCATGCTGCTTGTAGGCTAA+TGG | 0.361589 | 3.4:+63993679 | MS.gene38404:CDS |
| AGTGGAGCAAGGAGGATTCT+TGG | 0.365623 | 3.4:-63993506 | None:intergenic |
| CGTCCACAGAGCGTATCTTT+TGG | 0.380680 | 3.4:-63994633 | None:intergenic |
| TTTAGTCCTTATAGACCCTT+TGG | 0.382405 | 3.4:+63993746 | MS.gene38404:CDS |
| TAGAAGACTAGTTGAGCCTT+TGG | 0.383000 | 3.4:+63994879 | MS.gene38404:CDS |
| CTGCACCAACATTTAAGTTA+TGG | 0.385595 | 3.4:+63993908 | MS.gene38404:CDS |
| GATTCTTCCCTATGCTGTAT+TGG | 0.390982 | 3.4:-63995219 | None:intergenic |
| TTGTCTGAGCATACTACTTC+AGG | 0.393030 | 3.4:+63993995 | MS.gene38404:CDS |
| TAAGTTCCAAAGGGTCTATA+AGG | 0.394319 | 3.4:-63993752 | None:intergenic |
| AAGAAAGAATGGGTTGAGAT+AGG | 0.400022 | 3.4:+63994847 | MS.gene38404:CDS |
| TCTAGAAGGTAGCGTCTATC+TGG | 0.400295 | 3.4:-63991865 | None:intergenic |
| CATGCTGCTTGTAGGCTAAT+GGG | 0.400935 | 3.4:+63993680 | MS.gene38404:CDS |
| ATGCTACAAGGAGAGAAAAT+TGG | 0.407091 | 3.4:+63993441 | MS.gene38404:CDS |
| TCAAGCAGCAGCAGCATTAG+AGG | 0.410513 | 3.4:+63994579 | MS.gene38404:CDS |
| TTAAGTTATGGCACTGAACT+AGG | 0.410886 | 3.4:+63993920 | MS.gene38404:CDS |
| TCACAAGGCATGCTGCTTGT+AGG | 0.417204 | 3.4:+63993672 | MS.gene38404:CDS |
| CAGAAGCAAATAGTGTTTGC+AGG | 0.421391 | 3.4:+63993278 | MS.gene38404:CDS |
| GTGAGCAGGCTAGAACTTGC+AGG | 0.421924 | 3.4:+63994763 | MS.gene38404:CDS |
| GTGTTTGCAGGGCACTCATC+TGG | 0.428673 | 3.4:+63993290 | MS.gene38404:CDS |
| TTCAAATCTTTGGTCAAAAG+AGG | 0.433873 | 3.4:-63993531 | None:intergenic |
| CACATTTGCTTTGAAATCAT+CGG | 0.443023 | 3.4:-63994743 | None:intergenic |
| TCTGGCAACCCTTTGGGCCA+TGG | 0.444635 | 3.4:+63993328 | MS.gene38404:CDS |
| AAGAGATGCAAGTGAGATCA+TGG | 0.446425 | 3.4:+63991783 | MS.gene38404:CDS |
| CTTCGAAGATGTTAAGGATA+GGG | 0.449060 | 3.4:+63995092 | MS.gene38404:CDS |
| ATGACCTGCAGAATTGCATC+AGG | 0.450270 | 3.4:-63993827 | None:intergenic |
| AGAACCAAAAGTAACACATT+GGG | 0.450634 | 3.4:-63993390 | None:intergenic |
| AAGGAACAACGAGAAAACTA+TGG | 0.450912 | 3.4:+63994609 | MS.gene38404:CDS |
| AATTTGAAGGGAAGAAAGAA+TGG | 0.451649 | 3.4:+63994836 | MS.gene38404:CDS |
| TGGAGTAAGAATAGTAAAGT+TGG | 0.456690 | 3.4:+63995144 | MS.gene38404:CDS |
| AAATCTTGAAGCTGAATGTT+GGG | 0.458634 | 3.4:+63993945 | MS.gene38404:CDS |
| TAGAGGAACAGATAAGTGAT+TGG | 0.460680 | 3.4:+63995124 | MS.gene38404:CDS |
| CAAATTACTATAGACATTCA+AGG | 0.461160 | 3.4:+63994908 | MS.gene38404:CDS |
| TAAGAATAGTAAAGTTGGTA+AGG | 0.475935 | 3.4:+63995149 | MS.gene38404:CDS |
| TGGAGTTAGGCAGGTTTCCA+TGG | 0.476117 | 3.4:-63993345 | None:intergenic |
| AAAATCTTGAAGCTGAATGT+TGG | 0.480384 | 3.4:+63993944 | MS.gene38404:CDS |
| GCAGGTTTCCATGGCCCAAA+GGG | 0.486239 | 3.4:-63993336 | None:intergenic |
| GAAGTAGTATGCTCAGACAA+TGG | 0.496499 | 3.4:-63993992 | None:intergenic |
| GAACTTCCAGAAGAATTTGA+AGG | 0.496758 | 3.4:+63994823 | MS.gene38404:CDS |
| AAAGTCCTTCGAAGATGTTA+AGG | 0.497847 | 3.4:+63995086 | MS.gene38404:CDS |
| AACACAGCTTTAAATGACCT+TGG | 0.498363 | 3.4:+63994037 | MS.gene38404:CDS |
| CCTTCGAAGATGTTAAGGAT+AGG | 0.505414 | 3.4:+63995091 | MS.gene38404:CDS |
| AGGTTACTACGATGCATTCA+AGG | 0.506073 | 3.4:+63994708 | MS.gene38404:CDS |
| TACATCTTCTGCACTACAAG+TGG | 0.509213 | 3.4:+63993773 | MS.gene38404:CDS |
| CAGCATTAGAGGAACGGAAA+AGG | 0.510218 | 3.4:+63994590 | MS.gene38404:CDS |
| CAGTGCCATAACTTAAATGT+TGG | 0.514185 | 3.4:-63993913 | None:intergenic |
| AACACTACCAATACAGCATA+GGG | 0.521717 | 3.4:+63995212 | MS.gene38404:CDS |
| AGCTTTAAATGACCTTGGCC+TGG | 0.523885 | 3.4:+63994042 | MS.gene38404:CDS |
| CAGGTATACACAAAGATGGT+TGG | 0.524361 | 3.4:+63994981 | MS.gene38404:CDS |
| AATGAACATGTAGGTGGAGA+GGG | 0.526247 | 3.4:+63993244 | MS.gene38404:intron |
| ACTCATCTCGGAAAAGCCAC+TGG | 0.530829 | 3.4:+63993605 | MS.gene38404:CDS |
| CATGCTGATAAGAGAGGAGA+AGG | 0.533278 | 3.4:+63995006 | MS.gene38404:CDS |
| GCTAGAACTTGCAGGAGTAT+GGG | 0.533503 | 3.4:+63994771 | MS.gene38404:CDS |
| GCAGAAGATGTAAGTTCCAA+AGG | 0.536622 | 3.4:-63993762 | None:intergenic |
| AAACCCTGATGCAATTCTGC+AGG | 0.537767 | 3.4:+63993823 | MS.gene38404:CDS |
| ATTTGAAGGGAAGAAAGAAT+GGG | 0.545051 | 3.4:+63994837 | MS.gene38404:CDS |
| TCATCACAAAATGGAAGAAG+TGG | 0.551943 | 3.4:-63993469 | None:intergenic |
| AGATACGCTCTGTGGACGAT+AGG | 0.552326 | 3.4:+63994638 | MS.gene38404:CDS |
| GGCAGGTTTCCATGGCCCAA+AGG | 0.553099 | 3.4:-63993337 | None:intergenic |
| AACTTCCAGAAGAATTTGAA+GGG | 0.556815 | 3.4:+63994824 | MS.gene38404:CDS |
| GATACAGGTATACACAAAGA+TGG | 0.557227 | 3.4:+63994977 | MS.gene38404:CDS |
| AAACACTACCAATACAGCAT+AGG | 0.558238 | 3.4:+63995211 | MS.gene38404:CDS |
| ACGAGCAAATCGACTCATCT+CGG | 0.558539 | 3.4:+63993593 | MS.gene38404:CDS |
| ATTTCAAAGCAAATGTGAGC+AGG | 0.560036 | 3.4:+63994749 | MS.gene38404:CDS |
| CAGCAGTTACAGAGAAATGA+GGG | 0.565648 | 3.4:+63994672 | MS.gene38404:CDS |
| GAGAACCAAAAGTAACACAT+TGG | 0.565808 | 3.4:-63993391 | None:intergenic |
| CAAAAGTAACACATTGGGGA+TGG | 0.570292 | 3.4:-63993385 | None:intergenic |
| CAGAAGATGTAAGTTCCAAA+GGG | 0.580677 | 3.4:-63993761 | None:intergenic |
| GCTGATAAGAGAGGAGAAGG+AGG | 0.581639 | 3.4:+63995009 | MS.gene38404:CDS |
| TTTGCAGGGCACTCATCTGG+TGG | 0.585914 | 3.4:+63993293 | MS.gene38404:CDS |
| CCTATCCTTAACATCTTCGA+AGG | 0.587211 | 3.4:-63995091 | None:intergenic |
| AGAAGCAAATAGTGTTTGCA+GGG | 0.594581 | 3.4:+63993279 | MS.gene38404:CDS |
| TCAGCAGTTACAGAGAAATG+AGG | 0.597030 | 3.4:+63994671 | MS.gene38404:CDS |
| AATGTTTACTTACCAGGCCA+AGG | 0.598222 | 3.4:-63994054 | None:intergenic |
| TAATGAACATGTAGGTGGAG+AGG | 0.598485 | 3.4:+63993243 | MS.gene38404:intron |
| CAGCAGCAGCATTAGAGGAA+CGG | 0.598954 | 3.4:+63994584 | MS.gene38404:CDS |
| TGCCTAACTCCAAAATCTCA+TGG | 0.604932 | 3.4:+63993356 | MS.gene38404:CDS |
| CGTGTTTATATGGCTAAAGG+TGG | 0.606548 | 3.4:+63994943 | MS.gene38404:CDS |
| CAAAAGAGGAGAGTGGAGCA+AGG | 0.609151 | 3.4:-63993517 | None:intergenic |
| AAGCTGATGATAACTTCTGG+AGG | 0.614993 | 3.4:-63991907 | None:intergenic |
| AGGGTTGCCAGAATTGCCAC+TGG | 0.615205 | 3.4:-63993317 | None:intergenic |
| GCACTCATCTGGTGGACCAG+TGG | 0.616635 | 3.4:+63993301 | MS.gene38404:CDS |
| TAGTAATTTGCAATATCCAA+AGG | 0.619711 | 3.4:-63994895 | None:intergenic |
| GGACGTGTTTATATGGCTAA+AGG | 0.620483 | 3.4:+63994940 | MS.gene38404:CDS |
| CAAATGCTGCAACTGTCACA+AGG | 0.620723 | 3.4:+63993657 | MS.gene38404:CDS |
| TTTATATGGCTAAAGGTGGA+AGG | 0.627178 | 3.4:+63994947 | MS.gene38404:CDS |
| AGAGATGCAAGTGAGATCAT+GGG | 0.629840 | 3.4:+63991784 | MS.gene38404:CDS |
| CCATATAAACACGTCCATCA+CGG | 0.630887 | 3.4:-63994933 | None:intergenic |
| GTAGAAATCTGAAGTTCCAG+TGG | 0.638315 | 3.4:-63993621 | None:intergenic |
| CTTTGGTCAAAAGAGGAGAG+TGG | 0.641603 | 3.4:-63993524 | None:intergenic |
| AGCTGATGATAACTTCTGGA+GGG | 0.644106 | 3.4:-63991906 | None:intergenic |
| AGACATTCAAGGAACCGTGA+TGG | 0.644212 | 3.4:+63994919 | MS.gene38404:CDS |
| TTGGAACATGCTGATAAGAG+AGG | 0.656972 | 3.4:+63995000 | MS.gene38404:CDS |
| GAACCAAAAGTAACACATTG+GGG | 0.672795 | 3.4:-63993389 | None:intergenic |
| TGACCTGCAGAATTGCATCA+GGG | 0.673677 | 3.4:-63993826 | None:intergenic |
| TGAGTGCAGAGCGAATTGAG+AGG | 0.675389 | 3.4:+63991809 | MS.gene38404:CDS |
| TAGGCTAATGGGAACAACGG+CGG | 0.682497 | 3.4:+63993691 | MS.gene38404:CDS |
| TCTGAGCATACTACTTCAGG+AGG | 0.698901 | 3.4:+63993998 | MS.gene38404:CDS |
| AAGAGGAGAGTGGAGCAAGG+AGG | 0.703415 | 3.4:-63993514 | None:intergenic |
| GGACCAAAAGATACGCTCTG+TGG | 0.707399 | 3.4:+63994630 | MS.gene38404:CDS |
| TTGTAGGCTAATGGGAACAA+CGG | 0.746819 | 3.4:+63993688 | MS.gene38404:CDS |
| AGCAGTTACAGAGAAATGAG+GGG | 0.764549 | 3.4:+63994673 | MS.gene38404:CDS |
| CTAACTCCAAAATCTCATGG+CGG | 0.783970 | 3.4:+63993359 | MS.gene38404:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGTTCAATTTTAAAAT+GGG | + | chr3.4:63993014-63993033 | MS.gene38404:intron | 10.0% |
| !!! | ATATTACTCTTTTTTTTTAA+AGG | + | chr3.4:63994433-63994452 | MS.gene38404:intron | 10.0% |
| !! | AATTTGTGAATTTGATAAAA+TGG | + | chr3.4:63993045-63993064 | MS.gene38404:intron | 15.0% |
| !! | ACACAAAAATTAAATGTTTA+AGG | - | chr3.4:63994204-63994223 | None:intergenic | 15.0% |
| !! | ATTGTAGAAAGTAAAAATAT+TGG | + | chr3.4:63992428-63992447 | MS.gene38404:intron | 15.0% |
| !! | TTTCTTGAATTTCATAAAAT+AGG | - | chr3.4:63992813-63992832 | None:intergenic | 15.0% |
| !!! | AAAAGTTCAATTTTAAAATG+GGG | + | chr3.4:63993015-63993034 | MS.gene38404:intron | 15.0% |
| !!! | AAATAGATTAAGATCTATTT+TGG | - | chr3.4:63991986-63992005 | None:intergenic | 15.0% |
| !!! | ATATATTTTAATGAACATGT+AGG | + | chr3.4:63993235-63993254 | MS.gene38404:intron | 15.0% |
| !!! | ATCAATTAAACTAATTGTTT+TGG | - | chr3.4:63992324-63992343 | None:intergenic | 15.0% |
| !!! | CAAAAAGTTCAATTTTAAAA+TGG | + | chr3.4:63993013-63993032 | MS.gene38404:intron | 15.0% |
| !!! | TAAAAATATTGGTTTGATTA+CGG | + | chr3.4:63992439-63992458 | MS.gene38404:intron | 15.0% |
| !!! | TAATACTTTTATGTATTAGT+TGG | + | chr3.4:63994307-63994326 | MS.gene38404:intron | 15.0% |
| !!! | TTAAATGTTTAAGGTTTTTT+AGG | - | chr3.4:63994195-63994214 | None:intergenic | 15.0% |
| !!! | TTTTATGAAATTCAAGAAAA+TGG | + | chr3.4:63992814-63992833 | MS.gene38404:intron | 15.0% |
| !! | AATATTTGAGCATATCATTA+AGG | - | chr3.4:63992366-63992385 | None:intergenic | 20.0% |
| !! | AATATTTGAGCATATCATTT+AGG | - | chr3.4:63992704-63992723 | None:intergenic | 20.0% |
| !! | AATGCTTTGTCAAAAAAAAA+AGG | - | chr3.4:63992263-63992282 | None:intergenic | 20.0% |
| !! | ACTTTCTACAATTATTGAAA+AGG | - | chr3.4:63992758-63992777 | None:intergenic | 20.0% |
| !! | CTTAAAAAAATAGTGATTGT+TGG | - | chr3.4:63992940-63992959 | None:intergenic | 20.0% |
| !! | TACAACAAATGTAATAATTG+AGG | - | chr3.4:63992867-63992886 | None:intergenic | 20.0% |
| !! | TATATATGGTTAAGATAGAT+AGG | - | chr3.4:63992139-63992158 | None:intergenic | 20.0% |
| !! | TTTGTCAAAAAAAAAAGGTA+TGG | - | chr3.4:63992594-63992613 | None:intergenic | 20.0% |
| !!! | AAATATTGGTTTGATTAATG+TGG | + | chr3.4:63992442-63992461 | MS.gene38404:intron | 20.0% |
| !!! | AACATTTTTATCCTTATCTA+TGG | + | chr3.4:63994071-63994090 | MS.gene38404:intron | 20.0% |
| !!! | AATGTTACATTCTTTATTTG+AGG | + | chr3.4:63993207-63993226 | MS.gene38404:intron | 20.0% |
| !!! | CAACAATCACTATTTTTTTA+AGG | + | chr3.4:63992938-63992957 | MS.gene38404:intron | 20.0% |
| !!! | CAATTAAACACTAATTGTTT+TGG | - | chr3.4:63992660-63992679 | None:intergenic | 20.0% |
| !!! | CACTTTTAGCTTTAAAAAAA+AGG | + | chr3.4:63992904-63992923 | MS.gene38404:intron | 20.0% |
| !!! | GATTTATTTAATTTGCTTCT+AGG | - | chr3.4:63994340-63994359 | None:intergenic | 20.0% |
| !!! | GTTTGATTTATTTGCAATTT+TGG | - | chr3.4:63993075-63993094 | None:intergenic | 20.0% |
| !!! | TTTTTTAAAGCTAAAAGTGA+GGG | - | chr3.4:63992903-63992922 | None:intergenic | 20.0% |
| !!! | TTTTTTAAAGGAAGAGAAAA+TGG | + | chr3.4:63994445-63994464 | MS.gene38404:intron | 20.0% |
| !!! | TTTTTTTAAAGCTAAAAGTG+AGG | - | chr3.4:63992904-63992923 | None:intergenic | 20.0% |
| ! | AAAAATTGATTAACCAAACC+AGG | - | chr3.4:63992039-63992058 | None:intergenic | 25.0% |
| ! | AATATGTGATCTCCTATTAA+AGG | - | chr3.4:63993416-63993435 | None:intergenic | 25.0% |
| ! | AGCTAAAGATCTATTTAGAA+TGG | - | chr3.4:63994365-63994384 | None:intergenic | 25.0% |
| ! | CAAATTACTATAGACATTCA+AGG | + | chr3.4:63994908-63994927 | MS.gene38404:CDS | 25.0% |
| ! | CTTGAATTTCATAAAATAGG+AGG | - | chr3.4:63992810-63992829 | None:intergenic | 25.0% |
| ! | CTTTGTCAAAAAAAAAGGTA+TGG | - | chr3.4:63992259-63992278 | None:intergenic | 25.0% |
| ! | GAATGCTTTGTCAAAAAAAA+AGG | - | chr3.4:63992264-63992283 | None:intergenic | 25.0% |
| ! | GATAAAAATGTTTACTTACC+AGG | - | chr3.4:63994063-63994082 | None:intergenic | 25.0% |
| ! | TTGCATAACTAGATCATATA+CGG | - | chr3.4:63992536-63992555 | None:intergenic | 25.0% |
| ! | TTGTGAATTTGATAAAATGG+AGG | + | chr3.4:63993048-63993067 | MS.gene38404:intron | 25.0% |
| !! | AATAATCACATTGATTGACT+TGG | + | chr3.4:63994127-63994146 | MS.gene38404:intron | 25.0% |
| !! | TAGTAATTTGCAATATCCAA+AGG | - | chr3.4:63994898-63994917 | None:intergenic | 25.0% |
| !!! | ACAATGGAATATTTTCTAGT+TGG | - | chr3.4:63993979-63993998 | None:intergenic | 25.0% |
| !!! | ATCATATGGATTTGTTAGAA+AGG | + | chr3.4:63993179-63993198 | MS.gene38404:intron | 25.0% |
| !!! | CATTTTTAGCATTAGTAGAT+AGG | - | chr3.4:63992299-63992318 | None:intergenic | 25.0% |
| !!! | TAAGAATAGTAAAGTTGGTA+AGG | + | chr3.4:63995149-63995168 | MS.gene38404:CDS | 25.0% |
| !!! | TATTTTAATGAACATGTAGG+TGG | + | chr3.4:63993238-63993257 | MS.gene38404:intron | 25.0% |
| !!! | TTTAATTTGCTTCTAGGTTT+AGG | - | chr3.4:63994334-63994353 | None:intergenic | 25.0% |
| AAAATCTTGAAGCTGAATGT+TGG | + | chr3.4:63993944-63993963 | MS.gene38404:CDS | 30.0% | |
| AAACACAAAAGCCATAGATA+AGG | - | chr3.4:63994085-63994104 | None:intergenic | 30.0% | |
| AAATCTTGAAGCTGAATGTT+GGG | + | chr3.4:63993945-63993964 | MS.gene38404:CDS | 30.0% | |
| AACTTCCAGAAGAATTTGAA+GGG | + | chr3.4:63994824-63994843 | MS.gene38404:CDS | 30.0% | |
| AATTTGAAGGGAAGAAAGAA+TGG | + | chr3.4:63994836-63994855 | MS.gene38404:CDS | 30.0% | |
| AGAACCAAAAGTAACACATT+GGG | - | chr3.4:63993393-63993412 | None:intergenic | 30.0% | |
| ATTTGAAGGGAAGAAAGAAT+GGG | + | chr3.4:63994837-63994856 | MS.gene38404:CDS | 30.0% | |
| CATTAGTAGATAGGATAGTT+AGG | - | chr3.4:63992290-63992309 | None:intergenic | 30.0% | |
| CTCGTTAAAGATTTGTCTTT+AGG | - | chr3.4:63993578-63993597 | None:intergenic | 30.0% | |
| TGGAGTAAGAATAGTAAAGT+TGG | + | chr3.4:63995144-63995163 | MS.gene38404:CDS | 30.0% | |
| TGTCATATCTCATCACAAAA+TGG | - | chr3.4:63993481-63993500 | None:intergenic | 30.0% | |
| TTCAAATCTTTGGTCAAAAG+AGG | - | chr3.4:63993534-63993553 | None:intergenic | 30.0% | |
| ! | AAAGGTATGGATGCTAAAAA+AGG | - | chr3.4:63992581-63992600 | None:intergenic | 30.0% |
| ! | AAAGGTATGGATGCTATAAA+AGG | - | chr3.4:63992246-63992265 | None:intergenic | 30.0% |
| ! | ACATATTTTCTCATGCTACA+AGG | + | chr3.4:63993429-63993448 | MS.gene38404:CDS | 30.0% |
| ! | CTACACATCAAGCATTTTAT+TGG | - | chr3.4:63992490-63992509 | None:intergenic | 30.0% |
| ! | GTCATTTAAAGCTGTGTTAA+TGG | - | chr3.4:63994035-63994054 | None:intergenic | 30.0% |
| ! | TGTGTATACCTGTATCTTTT+TGG | - | chr3.4:63994973-63994992 | None:intergenic | 30.0% |
| ! | TTATTCGGAATCATGCTTTT+GGG | + | chr3.4:63995032-63995051 | MS.gene38404:CDS | 30.0% |
| ! | TTCTGTTGTTCTTTTCTAGA+AGG | - | chr3.4:63991882-63991901 | None:intergenic | 30.0% |
| ! | TTTCCTTCACTTAAAAGCAT+TGG | + | chr3.4:63992003-63992022 | MS.gene38404:intron | 30.0% |
| !! | AAACGTTTTGAGTGAATATG+CGG | - | chr3.4:63994156-63994175 | None:intergenic | 30.0% |
| !! | ATTGAAAAGGTACTACAAAG+AGG | - | chr3.4:63992745-63992764 | None:intergenic | 30.0% |
| !! | CACATTTGCTTTGAAATCAT+CGG | - | chr3.4:63994746-63994765 | None:intergenic | 30.0% |
| !! | TTACCAATGCTTTTAAGTGA+AGG | - | chr3.4:63992009-63992028 | None:intergenic | 30.0% |
| !!! | ACTTTTGGTTCTCCTTTAAT+AGG | + | chr3.4:63993401-63993420 | MS.gene38404:CDS | 30.0% |
| !!! | TATTGGTTTGATTACGGTTT+TGG | + | chr3.4:63992783-63992802 | MS.gene38404:intron | 30.0% |
| !!! | TTGTTTTGGAATACCAATCT+TGG | - | chr3.4:63991951-63991970 | None:intergenic | 30.0% |
| !!! | TTTTTTAAGGCCAAAAGTCA+AGG | + | chr3.4:63992951-63992970 | MS.gene38404:intron | 30.0% |
| AAACACTACCAATACAGCAT+AGG | + | chr3.4:63995211-63995230 | MS.gene38404:CDS | 35.0% | |
| AAAGTCCTTCGAAGATGTTA+AGG | + | chr3.4:63995086-63995105 | MS.gene38404:CDS | 35.0% | |
| AACACTACCAATACAGCATA+GGG | + | chr3.4:63995212-63995231 | MS.gene38404:CDS | 35.0% | |
| AAGGAACAACGAGAAAACTA+TGG | + | chr3.4:63994609-63994628 | MS.gene38404:CDS | 35.0% | |
| AAGGGTCTATAAGGACTAAA+AGG | - | chr3.4:63993746-63993765 | None:intergenic | 35.0% | |
| AGAAGCAAATAGTGTTTGCA+GGG | + | chr3.4:63993279-63993298 | MS.gene38404:CDS | 35.0% | |
| ATGACTTTGCCAAAATCTGT+TGG | - | chr3.4:63992074-63992093 | None:intergenic | 35.0% | |
| ATGCTACAAGGAGAGAAAAT+TGG | + | chr3.4:63993441-63993460 | MS.gene38404:CDS | 35.0% | |
| ATTTCAAAGCAAATGTGAGC+AGG | + | chr3.4:63994749-63994768 | MS.gene38404:CDS | 35.0% | |
| CAGAAGATGTAAGTTCCAAA+GGG | - | chr3.4:63993764-63993783 | None:intergenic | 35.0% | |
| CAGTGCCATAACTTAAATGT+TGG | - | chr3.4:63993916-63993935 | None:intergenic | 35.0% | |
| CCAAAATCTGTTGGAATCTT+TGG | - | chr3.4:63992065-63992084 | None:intergenic | 35.0% | |
| CTTCGAAGATGTTAAGGATA+GGG | + | chr3.4:63995092-63995111 | MS.gene38404:CDS | 35.0% | |
| GAACCAAAAGTAACACATTG+GGG | - | chr3.4:63993392-63993411 | None:intergenic | 35.0% | |
| GAACTTCCAGAAGAATTTGA+AGG | + | chr3.4:63994823-63994842 | MS.gene38404:CDS | 35.0% | |
| GAGAACCAAAAGTAACACAT+TGG | - | chr3.4:63993394-63993413 | None:intergenic | 35.0% | |
| GATACAGGTATACACAAAGA+TGG | + | chr3.4:63994977-63994996 | MS.gene38404:CDS | 35.0% | |
| GTATGGATGCTAAAAAAGGA+AGG | - | chr3.4:63992577-63992596 | None:intergenic | 35.0% | |
| GTCATCATCATTCGAATATC+AGG | + | chr3.4:63992089-63992108 | MS.gene38404:intron | 35.0% | |
| GTGAAACTGCTTCAAATCTT+TGG | - | chr3.4:63993544-63993563 | None:intergenic | 35.0% | |
| TAAAGCTAAAAGTGAGGGTT+GGG | - | chr3.4:63992898-63992917 | None:intergenic | 35.0% | |
| TAAGTTCCAAAGGGTCTATA+AGG | - | chr3.4:63993755-63993774 | None:intergenic | 35.0% | |
| TACAAAGAGGAAATCTCACA+TGG | - | chr3.4:63992732-63992751 | None:intergenic | 35.0% | |
| TACAAAGTGGAAATCTCACA+TGG | - | chr3.4:63992394-63992413 | None:intergenic | 35.0% | |
| TAGAGGAACAGATAAGTGAT+TGG | + | chr3.4:63995124-63995143 | MS.gene38404:CDS | 35.0% | |
| TCATCACAAAATGGAAGAAG+TGG | - | chr3.4:63993472-63993491 | None:intergenic | 35.0% | |
| TGGGATCAAAATTGCAACAA+AGG | + | chr3.4:63992975-63992994 | MS.gene38404:intron | 35.0% | |
| TGGTATTCCAAAACAACCTT+TGG | + | chr3.4:63991955-63991974 | MS.gene38404:intron | 35.0% | |
| TTAAAGCTAAAAGTGAGGGT+TGG | - | chr3.4:63992899-63992918 | None:intergenic | 35.0% | |
| TTCTTCCCTTCAAATTCTTC+TGG | - | chr3.4:63994832-63994851 | None:intergenic | 35.0% | |
| TTTAGTCCTTATAGACCCTT+TGG | + | chr3.4:63993746-63993765 | MS.gene38404:CDS | 35.0% | |
| TTTATATGGCTAAAGGTGGA+AGG | + | chr3.4:63994947-63994966 | MS.gene38404:CDS | 35.0% | |
| ! | AGTTCAAGCTCGACTATTTT+AGG | - | chr3.4:63993113-63993132 | None:intergenic | 35.0% |
| ! | ATGTTGGTGCAGACTTTTAT+CGG | - | chr3.4:63993900-63993919 | None:intergenic | 35.0% |
| ! | CCAAAGATTCCAACAGATTT+TGG | + | chr3.4:63992062-63992081 | MS.gene38404:intron | 35.0% |
| ! | CTGCACCAACATTTAAGTTA+TGG | + | chr3.4:63993908-63993927 | MS.gene38404:CDS | 35.0% |
| ! | GTTATTCGGAATCATGCTTT+TGG | + | chr3.4:63995031-63995050 | MS.gene38404:CDS | 35.0% |
| ! | TTAAGTTATGGCACTGAACT+AGG | + | chr3.4:63993920-63993939 | MS.gene38404:CDS | 35.0% |
| !! | AACACAGCTTTAAATGACCT+TGG | + | chr3.4:63994037-63994056 | MS.gene38404:CDS | 35.0% |
| !! | AAGAAAGAATGGGTTGAGAT+AGG | + | chr3.4:63994847-63994866 | MS.gene38404:CDS | 35.0% |
| !! | AGGGTTCTACTTTTGTTAAG+TGG | + | chr3.4:63995184-63995203 | MS.gene38404:CDS | 35.0% |
| !! | ATCGAAAAAGTGCTACAAAG+TGG | - | chr3.4:63992407-63992426 | None:intergenic | 35.0% |
| !! | GTTCTACTTTTGTTAAGTGG+TGG | + | chr3.4:63995187-63995206 | MS.gene38404:CDS | 35.0% |
| !!! | AGTTGGTAAGGATGTGTTTT+TGG | + | chr3.4:63995161-63995180 | MS.gene38404:CDS | 35.0% |
| !!! | ATCTATTTTGGTTGCACCAA+AGG | - | chr3.4:63991974-63991993 | None:intergenic | 35.0% |
| !!! | GGATAGGGTTTTAAAGTTAG+AGG | + | chr3.4:63995107-63995126 | MS.gene38404:CDS | 35.0% |
| AAGAGATGCAAGTGAGATCA+TGG | + | chr3.4:63991783-63991802 | MS.gene38404:CDS | 40.0% | |
| AAGCTGATGATAACTTCTGG+AGG | - | chr3.4:63991910-63991929 | None:intergenic | 40.0% | |
| AATGAACATGTAGGTGGAGA+GGG | + | chr3.4:63993244-63993263 | MS.gene38404:intron | 40.0% | |
| AATGTTTACTTACCAGGCCA+AGG | - | chr3.4:63994057-63994076 | None:intergenic | 40.0% | |
| AGAGATGCAAGTGAGATCAT+GGG | + | chr3.4:63991784-63991803 | MS.gene38404:CDS | 40.0% | |
| AGCAGTTACAGAGAAATGAG+GGG | + | chr3.4:63994673-63994692 | MS.gene38404:CDS | 40.0% | |
| AGCTGATGATAACTTCTGGA+GGG | - | chr3.4:63991909-63991928 | None:intergenic | 40.0% | |
| AGGTTACTACGATGCATTCA+AGG | + | chr3.4:63994708-63994727 | MS.gene38404:CDS | 40.0% | |
| ATGAGGGGACATCAGAAAAA+AGG | + | chr3.4:63994688-63994707 | MS.gene38404:CDS | 40.0% | |
| CAAAAGTAACACATTGGGGA+TGG | - | chr3.4:63993388-63993407 | None:intergenic | 40.0% | |
| CAGAAGCAAATAGTGTTTGC+AGG | + | chr3.4:63993278-63993297 | MS.gene38404:CDS | 40.0% | |
| CAGCAGTTACAGAGAAATGA+GGG | + | chr3.4:63994672-63994691 | MS.gene38404:CDS | 40.0% | |
| CAGGTATACACAAAGATGGT+TGG | + | chr3.4:63994981-63995000 | MS.gene38404:CDS | 40.0% | |
| CCATATAAACACGTCCATCA+CGG | - | chr3.4:63994936-63994955 | None:intergenic | 40.0% | |
| CCTATCCTTAACATCTTCGA+AGG | - | chr3.4:63995094-63995113 | None:intergenic | 40.0% | |
| CCTTCGAAGATGTTAAGGAT+AGG | + | chr3.4:63995091-63995110 | MS.gene38404:CDS | 40.0% | |
| CGTGTTTATATGGCTAAAGG+TGG | + | chr3.4:63994943-63994962 | MS.gene38404:CDS | 40.0% | |
| CTAACTCCAAAATCTCATGG+CGG | + | chr3.4:63993359-63993378 | MS.gene38404:CDS | 40.0% | |
| GAAGTAGTATGCTCAGACAA+TGG | - | chr3.4:63993995-63994014 | None:intergenic | 40.0% | |
| GATTCTTCCCTATGCTGTAT+TGG | - | chr3.4:63995222-63995241 | None:intergenic | 40.0% | |
| GCAGAAGATGTAAGTTCCAA+AGG | - | chr3.4:63993765-63993784 | None:intergenic | 40.0% | |
| GCTCACTGTCAAAGATCATA+TGG | + | chr3.4:63993165-63993184 | MS.gene38404:intron | 40.0% | |
| GGAAAGCTGATGATAACTTC+TGG | - | chr3.4:63991913-63991932 | None:intergenic | 40.0% | |
| GGACGTGTTTATATGGCTAA+AGG | + | chr3.4:63994940-63994959 | MS.gene38404:CDS | 40.0% | |
| TAATGAACATGTAGGTGGAG+AGG | + | chr3.4:63993243-63993262 | MS.gene38404:intron | 40.0% | |
| TACATCTTCTGCACTACAAG+TGG | + | chr3.4:63993773-63993792 | MS.gene38404:CDS | 40.0% | |
| TCAGCAGTTACAGAGAAATG+AGG | + | chr3.4:63994671-63994690 | MS.gene38404:CDS | 40.0% | |
| TGCCTAACTCCAAAATCTCA+TGG | + | chr3.4:63993356-63993375 | MS.gene38404:CDS | 40.0% | |
| TGGTAACAATGAACCTGGTT+TGG | + | chr3.4:63992023-63992042 | MS.gene38404:intron | 40.0% | |
| TTGGAACATGCTGATAAGAG+AGG | + | chr3.4:63995000-63995019 | MS.gene38404:CDS | 40.0% | |
| TTGTAGGCTAATGGGAACAA+CGG | + | chr3.4:63993688-63993707 | MS.gene38404:CDS | 40.0% | |
| TTGTCTGAGCATACTACTTC+AGG | + | chr3.4:63993995-63994014 | MS.gene38404:CDS | 40.0% | |
| ! | GTAGAAATCTGAAGTTCCAG+TGG | - | chr3.4:63993624-63993643 | None:intergenic | 40.0% |
| ! | TAGAAGACTAGTTGAGCCTT+TGG | + | chr3.4:63994879-63994898 | MS.gene38404:CDS | 40.0% |
| !! | AGCATTGGTAACAATGAACC+TGG | + | chr3.4:63992018-63992037 | MS.gene38404:intron | 40.0% |
| !!! | ATGAGATTTTGGAGTTAGGC+AGG | - | chr3.4:63993357-63993376 | None:intergenic | 40.0% |
| !!! | CATCCCCAATGTGTTACTTT+TGG | + | chr3.4:63993386-63993405 | MS.gene38404:CDS | 40.0% |
| !!! | GGTAAGGATGTGTTTTTGGA+GGG | + | chr3.4:63995165-63995184 | MS.gene38404:CDS | 40.0% |
| !!! | TGGTAAGGATGTGTTTTTGG+AGG | + | chr3.4:63995164-63995183 | MS.gene38404:CDS | 40.0% |
| AAACCCTGATGCAATTCTGC+AGG | + | chr3.4:63993823-63993842 | MS.gene38404:CDS | 45.0% | |
| AGACATTCAAGGAACCGTGA+TGG | + | chr3.4:63994919-63994938 | MS.gene38404:CDS | 45.0% | |
| ATCATCAGCTTTCCAGCATC+AGG | + | chr3.4:63991919-63991938 | MS.gene38404:intron | 45.0% | |
| ATGACCTGCAGAATTGCATC+AGG | - | chr3.4:63993830-63993849 | None:intergenic | 45.0% | |
| CAAATGCTGCAACTGTCACA+AGG | + | chr3.4:63993657-63993676 | MS.gene38404:CDS | 45.0% | |
| CAGCATTAGAGGAACGGAAA+AGG | + | chr3.4:63994590-63994609 | MS.gene38404:CDS | 45.0% | |
| CATCAGGTGCTTTCCAAGAT+TGG | + | chr3.4:63991935-63991954 | MS.gene38404:intron | 45.0% | |
| CATGCTGATAAGAGAGGAGA+AGG | + | chr3.4:63995006-63995025 | MS.gene38404:CDS | 45.0% | |
| CTTTGGTCAAAAGAGGAGAG+TGG | - | chr3.4:63993527-63993546 | None:intergenic | 45.0% | |
| GAGAGGAGAAGGAGGTTATT+CGG | + | chr3.4:63995017-63995036 | MS.gene38404:CDS | 45.0% | |
| GTGGAAGGCCAAAAAGATAC+AGG | + | chr3.4:63994962-63994981 | MS.gene38404:CDS | 45.0% | |
| TAAGGCCAAAAGTCAAGGCT+GGG | + | chr3.4:63992956-63992975 | MS.gene38404:intron | 45.0% | |
| TCTAGAAGGTAGCGTCTATC+TGG | - | chr3.4:63991868-63991887 | None:intergenic | 45.0% | |
| TCTGAGCATACTACTTCAGG+AGG | + | chr3.4:63993998-63994017 | MS.gene38404:CDS | 45.0% | |
| TGACCTGCAGAATTGCATCA+GGG | - | chr3.4:63993829-63993848 | None:intergenic | 45.0% | |
| TGGTGTCTTGTGAGCCTTTA+AGG | - | chr3.4:63991848-63991867 | None:intergenic | 45.0% | |
| TTAAGGCCAAAAGTCAAGGC+TGG | + | chr3.4:63992955-63992974 | MS.gene38404:intron | 45.0% | |
| ! | ACGAGCAAATCGACTCATCT+CGG | + | chr3.4:63993593-63993612 | MS.gene38404:CDS | 45.0% |
| ! | CATGCTGCTTGTAGGCTAAT+GGG | + | chr3.4:63993680-63993699 | MS.gene38404:CDS | 45.0% |
| ! | GCTAGAACTTGCAGGAGTAT+GGG | + | chr3.4:63994771-63994790 | MS.gene38404:CDS | 45.0% |
| ! | GGTTGCACCAAAGGTTGTTT+TGG | - | chr3.4:63991965-63991984 | None:intergenic | 45.0% |
| ! | TGGATACCGCCATGAGATTT+TGG | - | chr3.4:63993368-63993387 | None:intergenic | 45.0% |
| ! | TTGATCCCAGCCTTGACTTT+TGG | - | chr3.4:63992964-63992983 | None:intergenic | 45.0% |
| !! | AGCTTTAAATGACCTTGGCC+TGG | + | chr3.4:63994042-63994061 | MS.gene38404:CDS | 45.0% |
| !! | CCGTGATGGACGTGTTTATA+TGG | + | chr3.4:63994933-63994952 | MS.gene38404:CDS | 45.0% |
| !!! | CGCCATGAGATTTTGGAGTT+AGG | - | chr3.4:63993361-63993380 | None:intergenic | 45.0% |
| !! | CATATATATATATATATATA+TGG | - | chr3.4:63992170-63992151 | None:intergenic | 5.0% |
| ACTCATCTCGGAAAAGCCAC+TGG | + | chr3.4:63993605-63993624 | MS.gene38404:CDS | 50.0% | |
| AGATACGCTCTGTGGACGAT+AGG | + | chr3.4:63994638-63994657 | MS.gene38404:CDS | 50.0% | |
| AGTGGAGCAAGGAGGATTCT+TGG | - | chr3.4:63993509-63993528 | None:intergenic | 50.0% | |
| CAAAAGAGGAGAGTGGAGCA+AGG | - | chr3.4:63993520-63993539 | None:intergenic | 50.0% | |
| CAGCAGCAGCATTAGAGGAA+CGG | + | chr3.4:63994584-63994603 | MS.gene38404:CDS | 50.0% | |
| GCTGATAAGAGAGGAGAAGG+AGG | + | chr3.4:63995009-63995028 | MS.gene38404:CDS | 50.0% | |
| GGACCAAAAGATACGCTCTG+TGG | + | chr3.4:63994630-63994649 | MS.gene38404:CDS | 50.0% | |
| GGCAATTCTGGCAACCCTTT+GGG | + | chr3.4:63993322-63993341 | MS.gene38404:CDS | 50.0% | |
| GGCTAGAACTTGCAGGAGTA+TGG | + | chr3.4:63994770-63994789 | MS.gene38404:CDS | 50.0% | |
| GTCTCTTGCTGCGTCCTTAA+AGG | + | chr3.4:63991831-63991850 | MS.gene38404:CDS | 50.0% | |
| TAGGCTAATGGGAACAACGG+CGG | + | chr3.4:63993691-63993710 | MS.gene38404:CDS | 50.0% | |
| TCAAGCAGCAGCAGCATTAG+AGG | + | chr3.4:63994579-63994598 | MS.gene38404:CDS | 50.0% | |
| TGAGTGCAGAGCGAATTGAG+AGG | + | chr3.4:63991809-63991828 | MS.gene38404:CDS | 50.0% | |
| TGGAGTTAGGCAGGTTTCCA+TGG | - | chr3.4:63993348-63993367 | None:intergenic | 50.0% | |
| TGGCAATTCTGGCAACCCTT+TGG | + | chr3.4:63993321-63993340 | MS.gene38404:CDS | 50.0% | |
| ! | ATGCTTTTGGGCTGAGGTAG+AGG | + | chr3.4:63995044-63995063 | MS.gene38404:CDS | 50.0% |
| ! | CGTCCACAGAGCGTATCTTT+TGG | - | chr3.4:63994636-63994655 | None:intergenic | 50.0% |
| ! | GCATGCTGCTTGTAGGCTAA+TGG | + | chr3.4:63993679-63993698 | MS.gene38404:CDS | 50.0% |
| ! | GGAATCATGCTTTTGGGCTG+AGG | + | chr3.4:63995038-63995057 | MS.gene38404:CDS | 50.0% |
| ! | TCACAAGGCATGCTGCTTGT+AGG | + | chr3.4:63993672-63993691 | MS.gene38404:CDS | 50.0% |
| !! | TCTTGGAAAGCACCTGATGC+TGG | - | chr3.4:63991934-63991953 | None:intergenic | 50.0% |
| AAGAGGAGAGTGGAGCAAGG+AGG | - | chr3.4:63993517-63993536 | None:intergenic | 55.0% | |
| AGGGTTGCCAGAATTGCCAC+TGG | - | chr3.4:63993320-63993339 | None:intergenic | 55.0% | |
| GCAGGTTTCCATGGCCCAAA+GGG | - | chr3.4:63993339-63993358 | None:intergenic | 55.0% | |
| GTGAGCAGGCTAGAACTTGC+AGG | + | chr3.4:63994763-63994782 | MS.gene38404:CDS | 55.0% | |
| ! | GTGTTTGCAGGGCACTCATC+TGG | + | chr3.4:63993290-63993309 | MS.gene38404:CDS | 55.0% |
| ! | TGGTGGACCAGTGGCAATTC+TGG | + | chr3.4:63993310-63993329 | MS.gene38404:CDS | 55.0% |
| ! | TTTGCAGGGCACTCATCTGG+TGG | + | chr3.4:63993293-63993312 | MS.gene38404:CDS | 55.0% |
| GGCAGGTTTCCATGGCCCAA+AGG | - | chr3.4:63993340-63993359 | None:intergenic | 60.0% | |
| TCTGGCAACCCTTTGGGCCA+TGG | + | chr3.4:63993328-63993347 | MS.gene38404:CDS | 60.0% | |
| ! | GCACTCATCTGGTGGACCAG+TGG | + | chr3.4:63993301-63993320 | MS.gene38404:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 63991772 | 63995269 | 63991772 | ID=MS.gene38404 |
| chr3.4 | mRNA | 63991772 | 63995269 | 63991772 | ID=MS.gene38404.t1;Parent=MS.gene38404 |
| chr3.4 | exon | 63991772 | 63991915 | 63991772 | ID=MS.gene38404.t1.exon1;Parent=MS.gene38404.t1 |
| chr3.4 | CDS | 63991772 | 63991915 | 63991772 | ID=cds.MS.gene38404.t1;Parent=MS.gene38404.t1 |
| chr3.4 | exon | 63993257 | 63994063 | 63993257 | ID=MS.gene38404.t1.exon2;Parent=MS.gene38404.t1 |
| chr3.4 | CDS | 63993257 | 63994063 | 63993257 | ID=cds.MS.gene38404.t1;Parent=MS.gene38404.t1 |
| chr3.4 | exon | 63994556 | 63995269 | 63994556 | ID=MS.gene38404.t1.exon3;Parent=MS.gene38404.t1 |
| chr3.4 | CDS | 63994556 | 63995269 | 63994556 | ID=cds.MS.gene38404.t1;Parent=MS.gene38404.t1 |
| Gene Sequence |
| Protein sequence |
