Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25879.t1 | AES71566.2 | 96.9 | 618 | 19 | 0 | 1 | 618 | 1 | 618 | 0.00E+00 | 1204.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25879.t1 | Q9XF23 | 42.0 | 631 | 305 | 16 | 11 | 608 | 8 | 610 | 3.6e-122 | 440.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25879.t1 | G7J622 | 96.9 | 618 | 19 | 0 | 1 | 618 | 1 | 618 | 0.0e+00 | 1204.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene25879 | 0.818071 | 2.37E-52 | -1.69E-46 |
| MS.gene049413 | MS.gene25879 | 0.839084 | 1.96E-57 | -1.69E-46 |
| MS.gene050148 | MS.gene25879 | 0.805869 | 1.08E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene25879 | 0.804848 | 1.77E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene25879 | 0.800506 | 1.40E-48 | -1.69E-46 |
| MS.gene050562 | MS.gene25879 | 0.811381 | 7.20E-51 | -1.69E-46 |
| MS.gene050645 | MS.gene25879 | 0.817987 | 2.48E-52 | -1.69E-46 |
| MS.gene050669 | MS.gene25879 | 0.885947 | 5.24E-72 | -1.69E-46 |
| MS.gene050759 | MS.gene25879 | 0.800604 | 1.33E-48 | -1.69E-46 |
| MS.gene050961 | MS.gene25879 | 0.832209 | 1.08E-55 | -1.69E-46 |
| MS.gene051279 | MS.gene25879 | 0.850551 | 1.58E-60 | -1.69E-46 |
| MS.gene051744 | MS.gene25879 | 0.827378 | 1.62E-54 | -1.69E-46 |
| MS.gene052016 | MS.gene25879 | 0.833723 | 4.53E-56 | -1.69E-46 |
| MS.gene052037 | MS.gene25879 | 0.82661 | 2.47E-54 | -1.69E-46 |
| MS.gene052118 | MS.gene25879 | 0.832583 | 8.70E-56 | -1.69E-46 |
| MS.gene052493 | MS.gene25879 | 0.814359 | 1.60E-51 | -1.69E-46 |
| MS.gene053620 | MS.gene25879 | 0.814176 | 1.76E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene25879 | 0.828058 | 1.11E-54 | -1.69E-46 |
| MS.gene054576 | MS.gene25879 | 0.829106 | 6.20E-55 | -1.69E-46 |
| MS.gene054641 | MS.gene25879 | 0.80725 | 5.54E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene25879 | 0.929415 | 7.18E-93 | -1.69E-46 |
| MS.gene054893 | MS.gene25879 | 0.926412 | 4.86E-91 | -1.69E-46 |
| MS.gene055226 | MS.gene25879 | 0.818098 | 2.34E-52 | -1.69E-46 |
| MS.gene055229 | MS.gene25879 | 0.802077 | 6.66E-49 | -1.69E-46 |
| MS.gene055231 | MS.gene25879 | 0.817651 | 2.95E-52 | -1.69E-46 |
| MS.gene05539 | MS.gene25879 | 0.801324 | 9.50E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene25879 | 0.80209 | 6.62E-49 | -1.69E-46 |
| MS.gene056444 | MS.gene25879 | 0.820784 | 5.71E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene25879 | 0.830676 | 2.57E-55 | -1.69E-46 |
| MS.gene056973 | MS.gene25879 | 0.815505 | 8.93E-52 | -1.69E-46 |
| MS.gene057174 | MS.gene25879 | 0.802306 | 5.97E-49 | -1.69E-46 |
| MS.gene058095 | MS.gene25879 | 0.823934 | 1.06E-53 | -1.69E-46 |
| MS.gene058289 | MS.gene25879 | 0.81239 | 4.34E-51 | -1.69E-46 |
| MS.gene058429 | MS.gene25879 | 0.807155 | 5.80E-50 | -1.69E-46 |
| MS.gene05861 | MS.gene25879 | 0.868375 | 6.84E-66 | -1.69E-46 |
| MS.gene05862 | MS.gene25879 | 0.83123 | 1.88E-55 | -1.69E-46 |
| MS.gene059170 | MS.gene25879 | 0.806439 | 8.22E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene25879 | 0.815737 | 7.93E-52 | -1.69E-46 |
| MS.gene05956 | MS.gene25879 | 0.812628 | 3.85E-51 | -1.69E-46 |
| MS.gene059686 | MS.gene25879 | 0.810182 | 1.31E-50 | -1.69E-46 |
| MS.gene05969 | MS.gene25879 | 0.862821 | 3.86E-64 | -1.69E-46 |
| MS.gene059774 | MS.gene25879 | 0.839002 | 2.06E-57 | -1.69E-46 |
| MS.gene060259 | MS.gene25879 | 0.801252 | 9.83E-49 | -1.69E-46 |
| MS.gene060412 | MS.gene25879 | 0.8381 | 3.51E-57 | -1.69E-46 |
| MS.gene060413 | MS.gene25879 | 0.851052 | 1.14E-60 | -1.69E-46 |
| MS.gene060522 | MS.gene25879 | 0.808739 | 2.67E-50 | -1.69E-46 |
| MS.gene060697 | MS.gene25879 | 0.835879 | 1.30E-56 | -1.69E-46 |
| MS.gene060932 | MS.gene25879 | 0.806035 | 1.00E-49 | -1.69E-46 |
| MS.gene061047 | MS.gene25879 | 0.848434 | 6.14E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene25879 | MS.gene074397 | PPI |
| MS.gene25879 | MS.gene42360 | PPI |
| MS.gene25879 | MS.gene25909 | PPI |
| MS.gene25879 | MS.gene044112 | PPI |
| MS.gene25879 | MS.gene022252 | PPI |
| MS.gene25879 | MS.gene38399 | PPI |
| MS.gene25879 | MS.gene38408 | PPI |
| MS.gene25879 | MS.gene062716 | PPI |
| MS.gene38404 | MS.gene25879 | PPI |
| MS.gene25879 | MS.gene014545 | PPI |
| MS.gene25879 | MS.gene38392 | PPI |
| MS.gene25879 | MS.gene24315 | PPI |
| MS.gene25879 | MS.gene26931 | PPI |
| MS.gene25879 | MS.gene38404 | PPI |
| MS.gene25879 | MS.gene69123 | PPI |
| MS.gene25879 | MS.gene27345 | PPI |
| MS.gene25879 | MS.gene70582 | PPI |
| MS.gene25879 | MS.gene38414 | PPI |
| MS.gene25879 | MS.gene022225 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25879.t1 | MTR_3g079340 | 96.926 | 618 | 19 | 0 | 1 | 618 | 1 | 618 | 0.0 | 1253 |
| MS.gene25879.t1 | MTR_3g078633 | 51.954 | 614 | 278 | 10 | 12 | 616 | 13 | 618 | 0.0 | 602 |
| MS.gene25879.t1 | MTR_3g078633 | 53.772 | 517 | 224 | 9 | 109 | 616 | 36 | 546 | 0.0 | 532 |
| MS.gene25879.t1 | MTR_8g494200 | 30.000 | 510 | 286 | 23 | 119 | 593 | 127 | 600 | 5.29e-50 | 184 |
| MS.gene25879.t1 | MTR_3g079380 | 85.106 | 47 | 7 | 0 | 1 | 47 | 1 | 47 | 5.63e-22 | 91.3 |
| MS.gene25879.t1 | MTR_3g081450 | 48.485 | 99 | 48 | 2 | 504 | 601 | 32 | 128 | 1.59e-21 | 92.8 |
| MS.gene25879.t1 | MTR_3g467360 | 25.989 | 354 | 206 | 14 | 277 | 597 | 215 | 545 | 4.09e-21 | 97.8 |
| MS.gene25879.t1 | MTR_3g467360 | 25.989 | 354 | 206 | 14 | 277 | 597 | 209 | 539 | 4.23e-21 | 97.8 |
| MS.gene25879.t1 | MTR_6g007975 | 26.796 | 362 | 197 | 15 | 276 | 598 | 210 | 542 | 7.51e-21 | 97.1 |
| MS.gene25879.t1 | MTR_0095s0020 | 28.235 | 340 | 190 | 17 | 115 | 436 | 148 | 451 | 3.95e-20 | 95.1 |
| MS.gene25879.t1 | MTR_6g008015 | 25.956 | 366 | 194 | 16 | 276 | 597 | 210 | 542 | 5.58e-18 | 88.2 |
| MS.gene25879.t1 | MTR_6g007985 | 25.956 | 366 | 194 | 16 | 276 | 597 | 133 | 465 | 7.45e-18 | 87.4 |
| MS.gene25879.t1 | MTR_6g007980 | 23.161 | 367 | 201 | 15 | 277 | 597 | 209 | 540 | 4.65e-14 | 75.9 |
| MS.gene25879.t1 | MTR_6g007980 | 23.098 | 368 | 201 | 16 | 277 | 597 | 209 | 541 | 2.16e-13 | 73.6 |
| MS.gene25879.t1 | MTR_6g007980 | 23.161 | 367 | 200 | 16 | 277 | 597 | 209 | 539 | 3.70e-13 | 72.8 |
| MS.gene25879.t1 | MTR_6g008055 | 22.191 | 356 | 213 | 12 | 279 | 598 | 213 | 540 | 2.38e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25879.t1 | AT3G48090 | 41.680 | 631 | 307 | 16 | 11 | 608 | 8 | 610 | 3.00e-152 | 452 |
| MS.gene25879.t1 | AT3G48080 | 41.111 | 630 | 310 | 17 | 11 | 605 | 8 | 611 | 4.50e-146 | 437 |
| MS.gene25879.t1 | AT3G48090 | 44.722 | 521 | 239 | 12 | 117 | 608 | 2 | 502 | 3.35e-138 | 413 |
| MS.gene25879.t1 | AT3G52430 | 27.507 | 349 | 215 | 12 | 279 | 605 | 188 | 520 | 2.01e-29 | 123 |
| MS.gene25879.t1 | AT3G52430 | 40.260 | 77 | 40 | 2 | 124 | 200 | 112 | 182 | 6.83e-11 | 65.5 |
| MS.gene25879.t1 | AT5G14930 | 23.250 | 400 | 225 | 16 | 228 | 598 | 162 | 508 | 6.08e-14 | 75.1 |
Find 125 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCCATTCTAGCAACATTT+TGG | 0.165541 | 3.2:-69752753 | MS.gene25879:CDS |
| GCACTCTTCAGGGGCTGTTT+TGG | 0.210683 | 3.2:-69752773 | MS.gene25879:CDS |
| CTTCAAATGACGGTGATAAT+TGG | 0.226494 | 3.2:+69751271 | None:intergenic |
| CAAGTCACACTGTCTCTTAT+TGG | 0.237776 | 3.2:+69752466 | None:intergenic |
| GGCTGGTGCTTGCAGGAGTA+TGG | 0.255063 | 3.2:-69751409 | MS.gene25879:CDS |
| CTTGTGCTGAATTTGGATTT+TGG | 0.262348 | 3.2:+69752705 | None:intergenic |
| GATTCTGTGATTTCTGCTTT+TGG | 0.262651 | 3.2:+69751161 | None:intergenic |
| GTGTTTACAGGGCACTCTTC+AGG | 0.263760 | 3.2:-69752784 | MS.gene25879:CDS |
| CCATGTTGCTTGTAATCTAA+TGG | 0.268851 | 3.2:-69752398 | MS.gene25879:CDS |
| TATCTTGTTATAAGCTTTCC+AGG | 0.281876 | 3.2:-69753916 | MS.gene25879:CDS |
| TCACCCATGTGTGTCACTTT+TGG | 0.298374 | 3.2:-69752682 | MS.gene25879:CDS |
| TACTTGCTTCCCTTCTGTTA+TGG | 0.306603 | 3.2:+69752807 | None:intergenic |
| TTAAACAGTTCGGTAATATA+AGG | 0.310461 | 3.2:+69753961 | None:intergenic |
| TATTGCTCAGCTAAGAGATT+TGG | 0.321661 | 3.2:-69752230 | MS.gene25879:CDS |
| TGGGTGACTTGTGCTGAATT+TGG | 0.333001 | 3.2:+69752698 | None:intergenic |
| ACATTTGCTTGGAAATCCTT+TGG | 0.336033 | 3.2:+69751437 | None:intergenic |
| AAATCACAGAATCTACCTTT+TGG | 0.342438 | 3.2:-69751151 | MS.gene25879:CDS |
| GGCCTAGCCTTGTTCATGTA+AGG | 0.342464 | 3.2:+69751233 | None:intergenic |
| AACATGGGAGGAGGATTAGT+TGG | 0.353457 | 3.2:-69754063 | MS.gene25879:CDS |
| CGTCCCAAGCATGAGGGATT+TGG | 0.356445 | 3.2:-69751531 | MS.gene25879:CDS |
| GGGAAGCAAGTAGTGTTTAC+AGG | 0.360053 | 3.2:-69752796 | MS.gene25879:CDS |
| AGCCTATGAAGCTGAATTAG+AGG | 0.360951 | 3.2:-69752164 | MS.gene25879:CDS |
| TGAGTTAAGGAGTTGTTGTT+AGG | 0.376501 | 3.2:+69752493 | None:intergenic |
| ATCCTACCTTCATAAAGTTA+TGG | 0.377452 | 3.2:-69750989 | MS.gene25879:CDS |
| TGAGTGTACCTATACCTCTT+TGG | 0.384599 | 3.2:+69751212 | None:intergenic |
| GTGAAGAGGCTGGTGCTTGC+AGG | 0.385560 | 3.2:-69751416 | MS.gene25879:CDS |
| TCCTACCTTCATAAAGTTAT+GGG | 0.394701 | 3.2:-69750988 | MS.gene25879:CDS |
| GACGATCTTCCTTTGTCTGC+TGG | 0.394824 | 3.2:-69752100 | MS.gene25879:CDS |
| TGTTTACAGGGCACTCTTCA+GGG | 0.398661 | 3.2:-69752783 | MS.gene25879:CDS |
| TGACCAGTCCAAGGCTATCC+AGG | 0.399798 | 3.2:+69752047 | None:intergenic |
| CTCCTCTAATTCAGCTTCAT+AGG | 0.412451 | 3.2:+69752162 | None:intergenic |
| TTATAAGCTTTCCAGGATCA+TGG | 0.413698 | 3.2:-69753909 | MS.gene25879:CDS |
| CATGTTGCTTGTAATCTAAT+GGG | 0.415589 | 3.2:-69752397 | MS.gene25879:CDS |
| CCAGCCTCTTCACATTTGCT+TGG | 0.416168 | 3.2:+69751426 | None:intergenic |
| GGGAAGCACAAATTTGTTGT+TGG | 0.425534 | 3.2:-69752377 | MS.gene25879:CDS |
| TTAAGTCCGTATAGACCCTT+TGG | 0.433280 | 3.2:-69752331 | MS.gene25879:CDS |
| TGCCCAAAATGTTGCTAGAA+TGG | 0.436813 | 3.2:+69752750 | None:intergenic |
| TAAGTCCCAAAGGGTCTATA+CGG | 0.439330 | 3.2:+69752325 | None:intergenic |
| CGACTGTGCCTTCGAGCAGC+TGG | 0.442716 | 3.2:-69751617 | MS.gene25879:CDS |
| TCTTATTGGATCTTGAGTTA+AGG | 0.444425 | 3.2:+69752480 | None:intergenic |
| TTTCATTTGCTTAAAAGTGT+TGG | 0.452737 | 3.2:-69753826 | MS.gene25879:CDS |
| AGGCTAGGCCAAAGAGGTAT+AGG | 0.454952 | 3.2:-69751220 | MS.gene25879:CDS |
| TTCTTCCACCTCAGCCCAAA+AGG | 0.454957 | 3.2:+69751136 | None:intergenic |
| AGTAAAGAGAGTGGAGATGC+AGG | 0.460370 | 3.2:+69750935 | None:intergenic |
| TACCGACATTGCAGCCGCCC+TGG | 0.465765 | 3.2:-69752065 | MS.gene25879:CDS |
| CTTTCCTTGATATCTTCAAA+AGG | 0.465824 | 3.2:+69751086 | None:intergenic |
| CTTCCTTTGTCTGCTGGTGA+TGG | 0.469626 | 3.2:-69752094 | MS.gene25879:CDS |
| ATCCTTTGAGAACACATCCT+TGG | 0.470085 | 3.2:+69751010 | None:intergenic |
| GGAGTCAAAAGCTGAAGAAC+AGG | 0.474277 | 3.2:+69752514 | None:intergenic |
| CTTCCAAATCCCTCATGCTT+GGG | 0.479202 | 3.2:+69751528 | None:intergenic |
| TGATGCCTTCAAGGTGCAAA+AGG | 0.480497 | 3.2:-69751462 | MS.gene25879:CDS |
| GATGGTTGGAGCATGCAAAC+AGG | 0.482208 | 3.2:-69751187 | MS.gene25879:CDS |
| CGAATCTGTTGAAGAAAGCT+TGG | 0.491323 | 3.2:+69753779 | None:intergenic |
| ATCCAGGGCGGCTGCAATGT+CGG | 0.493844 | 3.2:+69752063 | None:intergenic |
| TCAGTTTCATCCCATGATCC+TGG | 0.495104 | 3.2:+69753898 | None:intergenic |
| GATCATGGGATGAAACTGAT+TGG | 0.497971 | 3.2:-69753894 | MS.gene25879:CDS |
| TCTTCCAAATCCCTCATGCT+TGG | 0.500980 | 3.2:+69751527 | None:intergenic |
| TGGTTTGTTAGAAAATCATT+TGG | 0.503071 | 3.2:-69753874 | MS.gene25879:CDS |
| TGTGAGATAAACAATGGAAA+AGG | 0.505004 | 3.2:-69751491 | MS.gene25879:CDS |
| CGCCCTGGATAGCCTTGGAC+TGG | 0.507505 | 3.2:-69752050 | MS.gene25879:intron |
| AGGTGGAAGAACTTTGCAGC+TGG | 0.514870 | 3.2:-69751124 | MS.gene25879:CDS |
| TATAAGCTTTCCAGGATCAT+GGG | 0.517119 | 3.2:-69753908 | MS.gene25879:CDS |
| TAAAATGTGGACTGATAAAG+AGG | 0.520001 | 3.2:-69751039 | MS.gene25879:CDS |
| AGTTTCCCATAACTTTATGA+AGG | 0.522028 | 3.2:+69750983 | None:intergenic |
| AGGTTATTATGATGCCTTCA+AGG | 0.524131 | 3.2:-69751471 | MS.gene25879:CDS |
| GCAGCCGCCCTGGATAGCCT+TGG | 0.528324 | 3.2:-69752055 | MS.gene25879:CDS |
| ACTTTCCTCATTTGTAGCTG+AGG | 0.530674 | 3.2:-69753743 | MS.gene25879:intron |
| GCTGAATTAGAGGAGAGCTT+AGG | 0.531773 | 3.2:-69752154 | MS.gene25879:CDS |
| TCACCGTCATTTGAAGAATG+AGG | 0.532372 | 3.2:-69751264 | MS.gene25879:CDS |
| TTCTTTAACAGTAAAGAGAG+TGG | 0.542406 | 3.2:+69750926 | None:intergenic |
| GGATTAGTTGGAGACAACAT+AGG | 0.544180 | 3.2:-69754051 | MS.gene25879:CDS |
| TAAGTCCGTATAGACCCTTT+GGG | 0.545191 | 3.2:-69752330 | MS.gene25879:CDS |
| TGAGGATGTCTTAAACAGTT+CGG | 0.546752 | 3.2:+69753951 | None:intergenic |
| TGGCAATGATGAAACTGCTT+TGG | 0.552119 | 3.2:-69753806 | MS.gene25879:CDS |
| CAGAAAATGTAAGTCCCAAA+GGG | 0.552723 | 3.2:+69752316 | None:intergenic |
| CCAAGCAAATGTGAAGAGGC+TGG | 0.554758 | 3.2:-69751426 | MS.gene25879:CDS |
| AACTGCCAGATGAGTTTGAA+GGG | 0.559752 | 3.2:-69751355 | MS.gene25879:CDS |
| GTTATGGGAAACTCTACCTC+AGG | 0.565285 | 3.2:-69750973 | MS.gene25879:CDS |
| GTTTACAGGGCACTCTTCAG+GGG | 0.565557 | 3.2:-69752782 | MS.gene25879:CDS |
| CCATTAGATTACAAGCAACA+TGG | 0.567203 | 3.2:+69752398 | None:intergenic |
| GTGAAGAAAGCCATAACAGA+AGG | 0.568972 | 3.2:-69752817 | MS.gene25879:CDS |
| AAATCATTGAAATGCTGAAG+AGG | 0.569071 | 3.2:-69751382 | MS.gene25879:CDS |
| TAGGTACACTCAGAGATGGT+TGG | 0.571876 | 3.2:-69751201 | MS.gene25879:CDS |
| GCTGGTGCTTGCAGGAGTAT+GGG | 0.572068 | 3.2:-69751408 | MS.gene25879:CDS |
| AAATATAGAAACATGGGAGG+AGG | 0.573513 | 3.2:-69754072 | None:intergenic |
| GCAGAAAATGTAAGTCCCAA+AGG | 0.575631 | 3.2:+69752315 | None:intergenic |
| TGTCCTCATTCTTCAAATGA+CGG | 0.579585 | 3.2:+69751261 | None:intergenic |
| TGATAAAGAGGTACTATCCA+AGG | 0.580893 | 3.2:-69751027 | MS.gene25879:CDS |
| ATTAATTACTGACCAGTCCA+AGG | 0.584798 | 3.2:+69752038 | None:intergenic |
| AAGATATTCTGTTAAGTCTG+AGG | 0.585241 | 3.2:+69753933 | None:intergenic |
| ACATACCTCAGCTACAAATG+AGG | 0.585270 | 3.2:+69753738 | None:intergenic |
| TCCCATAACTTTATGAAGGT+AGG | 0.586787 | 3.2:+69750987 | None:intergenic |
| ATCCAAGGATGTGTTCTCAA+AGG | 0.587180 | 3.2:-69751012 | MS.gene25879:CDS |
| CACAGGACCTTACATGAACA+AGG | 0.587269 | 3.2:-69751240 | MS.gene25879:CDS |
| GACCAGTCCAAGGCTATCCA+GGG | 0.591652 | 3.2:+69752048 | None:intergenic |
| AGAAGGCCGTCCCAAGCATG+AGG | 0.597386 | 3.2:-69751538 | MS.gene25879:CDS |
| CAAGGTGCAAAAGGATCCAA+AGG | 0.597796 | 3.2:-69751453 | MS.gene25879:CDS |
| CTAACTCGCCAGCTGCTCGA+AGG | 0.598382 | 3.2:+69751609 | None:intergenic |
| GAACTGCCAGATGAGTTTGA+AGG | 0.604489 | 3.2:-69751356 | MS.gene25879:CDS |
| GAATATATGATTACCAACCA+AGG | 0.604755 | 3.2:+69752654 | None:intergenic |
| GACCTTACATGAACAAGGCT+AGG | 0.606472 | 3.2:-69751235 | MS.gene25879:CDS |
| TGCAATATGACATTGTGCCA+AGG | 0.607100 | 3.2:-69752579 | MS.gene25879:CDS |
| GATGTAGATTTATGTTCCTG+AGG | 0.607470 | 3.2:+69750957 | None:intergenic |
| TCAACATGTGAGATAAACAA+TGG | 0.616431 | 3.2:-69751497 | MS.gene25879:CDS |
| TGGTAATGGCCAGCTGATTG+TGG | 0.617049 | 3.2:-69752290 | MS.gene25879:CDS |
| CAAATCCCTCATGCTTGGGA+CGG | 0.617619 | 3.2:+69751532 | None:intergenic |
| TGAAGAAAGCCATAACAGAA+GGG | 0.618618 | 3.2:-69752816 | MS.gene25879:CDS |
| GGAAGCAAGTAGTGTTTACA+GGG | 0.623668 | 3.2:-69752795 | MS.gene25879:CDS |
| AATATATGATTACCAACCAA+GGG | 0.624396 | 3.2:+69752655 | None:intergenic |
| ATTTCCAAGCAAATGTGAAG+AGG | 0.629078 | 3.2:-69751430 | MS.gene25879:CDS |
| GGTATAGGTACACTCAGAGA+TGG | 0.637909 | 3.2:-69751205 | MS.gene25879:CDS |
| TTGAGCAAGATATTAAAATG+TGG | 0.638522 | 3.2:-69751052 | MS.gene25879:CDS |
| TGATAATTGGCAATATCTAG+AGG | 0.642810 | 3.2:+69751284 | None:intergenic |
| CTAGAGGCTCAACAAGTCGA+CGG | 0.644029 | 3.2:+69751300 | None:intergenic |
| TGAACAAGGCTAGGCCAAAG+AGG | 0.645683 | 3.2:-69751226 | MS.gene25879:CDS |
| TGACCATCACCAGCAGACAA+AGG | 0.649953 | 3.2:+69752091 | None:intergenic |
| GAAGGCCGTCCCAAGCATGA+GGG | 0.652947 | 3.2:-69751537 | MS.gene25879:CDS |
| GAACCAAAAGTGACACACAT+GGG | 0.654173 | 3.2:+69752679 | None:intergenic |
| ACCAAATATAGAAACATGGG+AGG | 0.661129 | 3.2:-69754075 | None:intergenic |
| CAACATAGGATTAAACGAAG+AGG | 0.662983 | 3.2:-69754037 | MS.gene25879:CDS |
| AGAACCAAAAGTGACACACA+TGG | 0.671365 | 3.2:+69752678 | None:intergenic |
| GAGCTTAGGAATGCAAAATG+TGG | 0.681078 | 3.2:-69752140 | MS.gene25879:CDS |
| CAGTCCAAGGCTATCCAGGG+CGG | 0.692022 | 3.2:+69752051 | None:intergenic |
| TGCTGCATTCCTCATCACAG+TGG | 0.699489 | 3.2:+69752432 | None:intergenic |
| CATTTGAAGAATGAGGACAC+AGG | 0.760387 | 3.2:-69751257 | MS.gene25879:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAGTTAAGTTAATTTTT+TGG | - | chr3.2:69752054-69752073 | MS.gene25879:CDS | 10.0% |
| !!! | TTATTTTCTTTCTTTTTATT+TGG | - | chr3.2:69751307-69751326 | MS.gene25879:CDS | 10.0% |
| !! | AAATGAAGAGAAAATAAAAA+AGG | - | chr3.2:69753413-69753432 | MS.gene25879:intron | 15.0% |
| !! | AATAATAATGAAAGATTGTG+TGG | + | chr3.2:69751288-69751307 | None:intergenic | 20.0% |
| !! | ATAAAAAATGGTTATGGATT+TGG | + | chr3.2:69751744-69751763 | None:intergenic | 20.0% |
| !! | ATTGTTTCAATTAAGATAAC+TGG | + | chr3.2:69751817-69751836 | None:intergenic | 20.0% |
| !! | TAGCTTATAAAAAATGGTTA+TGG | + | chr3.2:69751750-69751769 | None:intergenic | 20.0% |
| !! | TATAAGATCTATCATATTGA+AGG | + | chr3.2:69753246-69753265 | None:intergenic | 20.0% |
| !! | TTGAAGTAGCTTATAAAAAA+TGG | + | chr3.2:69751756-69751775 | None:intergenic | 20.0% |
| !! | TTTATAGCTTATAAGTTCAT+AGG | - | chr3.2:69751373-69751392 | MS.gene25879:CDS | 20.0% |
| !!! | ATTTCACAAATTATCTGTTT+TGG | - | chr3.2:69752013-69752032 | MS.gene25879:intron | 20.0% |
| !!! | TCTTTCTTTTTATTTGGAAT+TGG | - | chr3.2:69751313-69751332 | MS.gene25879:CDS | 20.0% |
| ! | AATATATGATTACCAACCAA+GGG | + | chr3.2:69752331-69752350 | None:intergenic | 25.0% |
| ! | ATATAAGCTACTTGAATTAG+CGG | - | chr3.2:69751561-69751580 | MS.gene25879:CDS | 25.0% |
| ! | ATTTGTAGTGATTGGTAAAT+AGG | - | chr3.2:69751484-69751503 | MS.gene25879:CDS | 25.0% |
| ! | GAAAATAAAAAAGGAGTTTC+AGG | - | chr3.2:69753422-69753441 | MS.gene25879:intron | 25.0% |
| ! | TATACTTGATGAACTTATAG+CGG | - | chr3.2:69751424-69751443 | MS.gene25879:CDS | 25.0% |
| ! | TTAAACAGTTCGGTAATATA+AGG | + | chr3.2:69751025-69751044 | None:intergenic | 25.0% |
| ! | TTAATGTGACAAACAACATT+AGG | + | chr3.2:69751978-69751997 | None:intergenic | 25.0% |
| ! | TTGAGCAAGATATTAAAATG+TGG | - | chr3.2:69753931-69753950 | MS.gene25879:CDS | 25.0% |
| ! | TTGTGAAATTACTCAAATCA+TGG | + | chr3.2:69752002-69752021 | None:intergenic | 25.0% |
| !! | CTAACCAAGGTTTAAAATAA+TGG | + | chr3.2:69753126-69753145 | None:intergenic | 25.0% |
| !! | GTTGTTAAACATGTCTATTT+TGG | + | chr3.2:69751400-69751419 | None:intergenic | 25.0% |
| !! | TTTCATTTGCTTAAAAGTGT+TGG | - | chr3.2:69751157-69751176 | MS.gene25879:CDS | 25.0% |
| !!! | AAAAAAGAATGGATTGAACT+CGG | - | chr3.2:69753651-69753670 | MS.gene25879:intron | 25.0% |
| !!! | TAAACCTTTTGAAGATATCA+AGG | - | chr3.2:69753893-69753912 | MS.gene25879:CDS | 25.0% |
| !!! | TCAACCATTATTTTAAACCT+TGG | - | chr3.2:69753119-69753138 | MS.gene25879:intron | 25.0% |
| !!! | TCTTTTTATTTGGAATTGGA+TGG | - | chr3.2:69751317-69751336 | MS.gene25879:CDS | 25.0% |
| !!! | TGGTTTGTTAGAAAATCATT+TGG | - | chr3.2:69751109-69751128 | MS.gene25879:CDS | 25.0% |
| !!! | TTTTGAAGATATCAAGGAAA+GGG | - | chr3.2:69753899-69753918 | MS.gene25879:CDS | 25.0% |
| AAATCATTGAAATGCTGAAG+AGG | - | chr3.2:69753601-69753620 | MS.gene25879:intron | 30.0% | |
| AAGATATTCTGTTAAGTCTG+AGG | + | chr3.2:69751053-69751072 | None:intergenic | 30.0% | |
| AGTTTCCCATAACTTTATGA+AGG | + | chr3.2:69754003-69754022 | None:intergenic | 30.0% | |
| AGTTTGAAGGGAAAAAAGAA+TGG | - | chr3.2:69753640-69753659 | MS.gene25879:intron | 30.0% | |
| ATATGCTCATATGACTGAAA+AGG | + | chr3.2:69751680-69751699 | None:intergenic | 30.0% | |
| ATCCTACCTTCATAAAGTTA+TGG | - | chr3.2:69753994-69754013 | MS.gene25879:CDS | 30.0% | |
| ATGACTGAAAAGGATATATC+TGG | + | chr3.2:69751670-69751689 | None:intergenic | 30.0% | |
| ATGCTTCAAACAGAGAAAAA+TGG | - | chr3.2:69752356-69752375 | MS.gene25879:CDS | 30.0% | |
| CAAACAACATTAGGACTATT+TGG | + | chr3.2:69751969-69751988 | None:intergenic | 30.0% | |
| CTGATTGAATTTGTAGTGAT+TGG | - | chr3.2:69751476-69751495 | MS.gene25879:CDS | 30.0% | |
| CTTTCCTTGATATCTTCAAA+AGG | + | chr3.2:69753900-69753919 | None:intergenic | 30.0% | |
| GAATATATGATTACCAACCA+AGG | + | chr3.2:69752332-69752351 | None:intergenic | 30.0% | |
| TCAACATGTGAGATAAACAA+TGG | - | chr3.2:69753486-69753505 | MS.gene25879:intron | 30.0% | |
| TCCTACCTTCATAAAGTTAT+GGG | - | chr3.2:69753995-69754014 | MS.gene25879:CDS | 30.0% | |
| TCTTATTGGATCTTGAGTTA+AGG | + | chr3.2:69752506-69752525 | None:intergenic | 30.0% | |
| TGATAATTGGCAATATCTAG+AGG | + | chr3.2:69753702-69753721 | None:intergenic | 30.0% | |
| TGTGAGATAAACAATGGAAA+AGG | - | chr3.2:69753492-69753511 | MS.gene25879:intron | 30.0% | |
| TTCTTTAACAGTAAAGAGAG+TGG | + | chr3.2:69754060-69754079 | None:intergenic | 30.0% | |
| TTGGTGAAAACATAACAGAT+AGG | + | chr3.2:69751950-69751969 | None:intergenic | 30.0% | |
| ! | AAATCACAGAATCTACCTTT+TGG | - | chr3.2:69753832-69753851 | MS.gene25879:CDS | 30.0% |
| ! | AATCACAGAATCTACCTTTT+GGG | - | chr3.2:69753833-69753852 | MS.gene25879:CDS | 30.0% |
| ! | CATGTTGCTTGTAATCTAAT+GGG | - | chr3.2:69752586-69752605 | MS.gene25879:CDS | 30.0% |
| ! | TAAAATGTGGACTGATAAAG+AGG | - | chr3.2:69753944-69753963 | MS.gene25879:CDS | 30.0% |
| ! | TACATTTTCTGCAATGGTAA+TGG | - | chr3.2:69752679-69752698 | MS.gene25879:CDS | 30.0% |
| ! | TATCTTGTTATAAGCTTTCC+AGG | - | chr3.2:69751067-69751086 | MS.gene25879:CDS | 30.0% |
| !! | AGGACTAATGAGTTTTTCAA+TGG | + | chr3.2:69752452-69752471 | None:intergenic | 30.0% |
| !! | AGTTTTTCAATGGAAGAGAA+AGG | + | chr3.2:69752442-69752461 | None:intergenic | 30.0% |
| !! | CTTTTGAAGATATCAAGGAA+AGG | - | chr3.2:69753898-69753917 | MS.gene25879:CDS | 30.0% |
| AAAAAAGGAGTTTCAGGAGA+AGG | - | chr3.2:69753428-69753447 | MS.gene25879:intron | 35.0% | |
| AATCAAATGTGTTGCATTGC+AGG | - | chr3.2:69752144-69752163 | MS.gene25879:CDS | 35.0% | |
| ACAATAACATGCTCTAACCA+AGG | + | chr3.2:69753139-69753158 | None:intergenic | 35.0% | |
| ACATTTGCTTGGAAATCCTT+TGG | + | chr3.2:69753549-69753568 | None:intergenic | 35.0% | |
| ACCATACAATCGTAAATGGA+TGG | + | chr3.2:69753180-69753199 | None:intergenic | 35.0% | |
| ACCATCCATTTACGATTGTA+TGG | - | chr3.2:69753176-69753195 | MS.gene25879:intron | 35.0% | |
| AGGTTATTATGATGCCTTCA+AGG | - | chr3.2:69753512-69753531 | MS.gene25879:intron | 35.0% | |
| ATAATGAAAGATTGTGTGGC+AGG | + | chr3.2:69751284-69751303 | None:intergenic | 35.0% | |
| ATTAATTACTGACCAGTCCA+AGG | + | chr3.2:69752948-69752967 | None:intergenic | 35.0% | |
| ATTTCCAAGCAAATGTGAAG+AGG | - | chr3.2:69753553-69753572 | MS.gene25879:intron | 35.0% | |
| CAACATAGGATTAAACGAAG+AGG | - | chr3.2:69750946-69750965 | MS.gene25879:CDS | 35.0% | |
| CAGAAAATGTAAGTCCCAAA+GGG | + | chr3.2:69752670-69752689 | None:intergenic | 35.0% | |
| CCATTAGATTACAAGCAACA+TGG | + | chr3.2:69752588-69752607 | None:intergenic | 35.0% | |
| CGATAAGCTAGCTGATTATT+TGG | + | chr3.2:69751927-69751946 | None:intergenic | 35.0% | |
| CTTCAAATGACGGTGATAAT+TGG | + | chr3.2:69753715-69753734 | None:intergenic | 35.0% | |
| CTTGACCATACAATCGTAAA+TGG | + | chr3.2:69753184-69753203 | None:intergenic | 35.0% | |
| GATGTAGATTTATGTTCCTG+AGG | + | chr3.2:69754029-69754048 | None:intergenic | 35.0% | |
| TAATGAAAGATTGTGTGGCA+GGG | + | chr3.2:69751283-69751302 | None:intergenic | 35.0% | |
| TATAAGCTTTCCAGGATCAT+GGG | - | chr3.2:69751075-69751094 | MS.gene25879:CDS | 35.0% | |
| TATTAGCGCAAAATTTGTCG+TGG | + | chr3.2:69751345-69751364 | None:intergenic | 35.0% | |
| TATTGCTCAGCTAAGAGATT+TGG | - | chr3.2:69752753-69752772 | MS.gene25879:CDS | 35.0% | |
| TCCCATAACTTTATGAAGGT+AGG | + | chr3.2:69753999-69754018 | None:intergenic | 35.0% | |
| TGAAGAAAGCCATAACAGAA+GGG | - | chr3.2:69752167-69752186 | MS.gene25879:CDS | 35.0% | |
| TGAGGATGTCTTAAACAGTT+CGG | + | chr3.2:69751035-69751054 | None:intergenic | 35.0% | |
| TGCAATGCAACACATTTGAT+TGG | + | chr3.2:69752145-69752164 | None:intergenic | 35.0% | |
| TGTCCTCATTCTTCAAATGA+CGG | + | chr3.2:69753725-69753744 | None:intergenic | 35.0% | |
| TTATAAGCTTTCCAGGATCA+TGG | - | chr3.2:69751074-69751093 | MS.gene25879:CDS | 35.0% | |
| ! | CCATGTTGCTTGTAATCTAA+TGG | - | chr3.2:69752585-69752604 | MS.gene25879:CDS | 35.0% |
| ! | CTTGTGCTGAATTTGGATTT+TGG | + | chr3.2:69752281-69752300 | None:intergenic | 35.0% |
| ! | GATTCTGTGATTTCTGCTTT+TGG | + | chr3.2:69753825-69753844 | None:intergenic | 35.0% |
| ! | TGAGTTAAGGAGTTGTTGTT+AGG | + | chr3.2:69752493-69752512 | None:intergenic | 35.0% |
| ! | TTTTTCCCTTCAAACTCATC+TGG | + | chr3.2:69753636-69753655 | None:intergenic | 35.0% |
| !! | TGATAAAGAGGTACTATCCA+AGG | - | chr3.2:69753956-69753975 | MS.gene25879:CDS | 35.0% |
| !! | TGCTGAATTTGGATTTTGGT+TGG | + | chr3.2:69752277-69752296 | None:intergenic | 35.0% |
| !!! | AGTTTTTTACCACAATCAGC+TGG | + | chr3.2:69752705-69752724 | None:intergenic | 35.0% |
| !!! | GCTGAATTTGGATTTTGGTT+GGG | + | chr3.2:69752276-69752295 | None:intergenic | 35.0% |
| AAAGGAGCGAGAAAAATCCT+TGG | + | chr3.2:69752424-69752443 | None:intergenic | 40.0% | |
| AACTGCCAGATGAGTTTGAA+GGG | - | chr3.2:69753628-69753647 | MS.gene25879:intron | 40.0% | |
| ACATACCTCAGCTACAAATG+AGG | + | chr3.2:69751248-69751267 | None:intergenic | 40.0% | |
| ACTTTCCTCATTTGTAGCTG+AGG | - | chr3.2:69751240-69751259 | MS.gene25879:CDS | 40.0% | |
| AGAACCAAAAGTGACACACA+TGG | + | chr3.2:69752308-69752327 | None:intergenic | 40.0% | |
| AGATACTCGTGAGAAAGTGA+CGG | - | chr3.2:69751641-69751660 | MS.gene25879:intron | 40.0% | |
| AGCCTATGAAGCTGAATTAG+AGG | - | chr3.2:69752819-69752838 | MS.gene25879:CDS | 40.0% | |
| ATCCAAGGATGTGTTCTCAA+AGG | - | chr3.2:69753971-69753990 | MS.gene25879:CDS | 40.0% | |
| CAAGTCACACTGTCTCTTAT+TGG | + | chr3.2:69752520-69752539 | None:intergenic | 40.0% | |
| CATTTGAAGAATGAGGACAC+AGG | - | chr3.2:69753726-69753745 | MS.gene25879:intron | 40.0% | |
| CGAATCTGTTGAAGAAAGCT+TGG | + | chr3.2:69751207-69751226 | None:intergenic | 40.0% | |
| CTCCTCTAATTCAGCTTCAT+AGG | + | chr3.2:69752824-69752843 | None:intergenic | 40.0% | |
| GAACCAAAAGTGACACACAT+GGG | + | chr3.2:69752307-69752326 | None:intergenic | 40.0% | |
| GAGCTTAGGAATGCAAAATG+TGG | - | chr3.2:69752843-69752862 | MS.gene25879:intron | 40.0% | |
| GATCATGGGATGAAACTGAT+TGG | - | chr3.2:69751089-69751108 | MS.gene25879:CDS | 40.0% | |
| GCAGAAAATGTAAGTCCCAA+AGG | + | chr3.2:69752671-69752690 | None:intergenic | 40.0% | |
| GGAAGCAAGTAGTGTTTACA+GGG | - | chr3.2:69752188-69752207 | MS.gene25879:CDS | 40.0% | |
| GTGAAGAAAGCCATAACAGA+AGG | - | chr3.2:69752166-69752185 | MS.gene25879:CDS | 40.0% | |
| GTTAGAGCGAAGGTTTCAAA+AGG | - | chr3.2:69753008-69753027 | MS.gene25879:intron | 40.0% | |
| TAAGTCCCAAAGGGTCTATA+CGG | + | chr3.2:69752661-69752680 | None:intergenic | 40.0% | |
| TAAGTCCGTATAGACCCTTT+GGG | - | chr3.2:69752653-69752672 | MS.gene25879:CDS | 40.0% | |
| TACTTGCTTCCCTTCTGTTA+TGG | + | chr3.2:69752179-69752198 | None:intergenic | 40.0% | |
| TCACCGTCATTTGAAGAATG+AGG | - | chr3.2:69753719-69753738 | MS.gene25879:intron | 40.0% | |
| TGAGTGTACCTATACCTCTT+TGG | + | chr3.2:69753774-69753793 | None:intergenic | 40.0% | |
| TGCAATATGACATTGTGCCA+AGG | - | chr3.2:69752404-69752423 | MS.gene25879:CDS | 40.0% | |
| TGCCCAAAATGTTGCTAGAA+TGG | + | chr3.2:69752236-69752255 | None:intergenic | 40.0% | |
| TGGCAATGATGAAACTGCTT+TGG | - | chr3.2:69751177-69751196 | MS.gene25879:CDS | 40.0% | |
| TTAAGTCCGTATAGACCCTT+TGG | - | chr3.2:69752652-69752671 | MS.gene25879:CDS | 40.0% | |
| ! | AGTTTTACTCCACTGTGATG+AGG | - | chr3.2:69752542-69752561 | MS.gene25879:CDS | 40.0% |
| ! | ATCCTTTGAGAACACATCCT+TGG | + | chr3.2:69753976-69753995 | None:intergenic | 40.0% |
| ! | ATGCTGCAGTATGCTTTTGT+TGG | + | chr3.2:69752797-69752816 | None:intergenic | 40.0% |
| ! | GGCCATTCTAGCAACATTTT+GGG | - | chr3.2:69752231-69752250 | MS.gene25879:CDS | 40.0% |
| ! | GGGACTTACATTTTCTGCAA+TGG | - | chr3.2:69752673-69752692 | MS.gene25879:CDS | 40.0% |
| ! | GGTTTCAAAAGGTGTGATTG+TGG | - | chr3.2:69753019-69753038 | MS.gene25879:intron | 40.0% |
| ! | TCTAGCAACATTTTGGGCAT+TGG | - | chr3.2:69752237-69752256 | MS.gene25879:CDS | 40.0% |
| ! | TGGCCATTCTAGCAACATTT+TGG | - | chr3.2:69752230-69752249 | MS.gene25879:CDS | 40.0% |
| !! | GGATTAGTTGGAGACAACAT+AGG | - | chr3.2:69750932-69750951 | MS.gene25879:CDS | 40.0% |
| !! | GGGAAGCACAAATTTGTTGT+TGG | - | chr3.2:69752606-69752625 | MS.gene25879:CDS | 40.0% |
| AGCGTATTGAGTTAGAGCGA+AGG | - | chr3.2:69752998-69753017 | MS.gene25879:intron | 45.0% | |
| AGTAAAGAGAGTGGAGATGC+AGG | + | chr3.2:69754051-69754070 | None:intergenic | 45.0% | |
| CAAGGTGCAAAAGGATCCAA+AGG | - | chr3.2:69753530-69753549 | MS.gene25879:intron | 45.0% | |
| CACAGGACCTTACATGAACA+AGG | - | chr3.2:69753743-69753762 | MS.gene25879:intron | 45.0% | |
| CTTCCAAATCCCTCATGCTT+GGG | + | chr3.2:69753458-69753477 | None:intergenic | 45.0% | |
| GAACTGCCAGATGAGTTTGA+AGG | - | chr3.2:69753627-69753646 | MS.gene25879:intron | 45.0% | |
| GACCTTACATGAACAAGGCT+AGG | - | chr3.2:69753748-69753767 | MS.gene25879:CDS | 45.0% | |
| GCTGAATTAGAGGAGAGCTT+AGG | - | chr3.2:69752829-69752848 | MS.gene25879:intron | 45.0% | |
| GGAGTCAAAAGCTGAAGAAC+AGG | + | chr3.2:69752472-69752491 | None:intergenic | 45.0% | |
| GGGAAGCAAGTAGTGTTTAC+AGG | - | chr3.2:69752187-69752206 | MS.gene25879:CDS | 45.0% | |
| GGTATAGGTACACTCAGAGA+TGG | - | chr3.2:69753778-69753797 | MS.gene25879:CDS | 45.0% | |
| GTTATGGGAAACTCTACCTC+AGG | - | chr3.2:69754010-69754029 | MS.gene25879:CDS | 45.0% | |
| TAGGTACACTCAGAGATGGT+TGG | - | chr3.2:69753782-69753801 | MS.gene25879:CDS | 45.0% | |
| TCAGTTTCATCCCATGATCC+TGG | + | chr3.2:69751088-69751107 | None:intergenic | 45.0% | |
| TCTTCCAAATCCCTCATGCT+TGG | + | chr3.2:69753459-69753478 | None:intergenic | 45.0% | |
| TGATGCCTTCAAGGTGCAAA+AGG | - | chr3.2:69753521-69753540 | MS.gene25879:intron | 45.0% | |
| ! | AGAATCTACCTTTTGGGCTG+AGG | - | chr3.2:69753839-69753858 | MS.gene25879:CDS | 45.0% |
| ! | TGGATCCTTTTGCACCTTGA+AGG | + | chr3.2:69753529-69753548 | None:intergenic | 45.0% |
| ! | TGGGTGACTTGTGCTGAATT+TGG | + | chr3.2:69752288-69752307 | None:intergenic | 45.0% |
| ! | TGTTTACAGGGCACTCTTCA+GGG | - | chr3.2:69752200-69752219 | MS.gene25879:CDS | 45.0% |
| !!! | ACTTTTGGTTCTCCCTTGGT+TGG | - | chr3.2:69752316-69752335 | MS.gene25879:CDS | 45.0% |
| !!! | TCACCCATGTGTGTCACTTT+TGG | - | chr3.2:69752301-69752320 | MS.gene25879:CDS | 45.0% |
| !!! | TGTCACTTTTGGTTCTCCCT+TGG | - | chr3.2:69752312-69752331 | MS.gene25879:CDS | 45.0% |
| !! | AAAATAATTATTATAGATAA+AGG | - | chr3.2:69752089-69752108 | MS.gene25879:CDS | 5.0% |
| AGGTGGAAGAACTTTGCAGC+TGG | - | chr3.2:69753859-69753878 | MS.gene25879:CDS | 50.0% | |
| CAAATCCCTCATGCTTGGGA+CGG | + | chr3.2:69753454-69753473 | None:intergenic | 50.0% | |
| CCAAGCAAATGTGAAGAGGC+TGG | - | chr3.2:69753557-69753576 | MS.gene25879:intron | 50.0% | |
| CCAGCCTCTTCACATTTGCT+TGG | + | chr3.2:69753560-69753579 | None:intergenic | 50.0% | |
| CTACACTGCGACTGCAATTG+TGG | - | chr3.2:69753077-69753096 | MS.gene25879:intron | 50.0% | |
| CTAGAGGCTCAACAAGTCGA+CGG | + | chr3.2:69753686-69753705 | None:intergenic | 50.0% | |
| CTTCCTTTGTCTGCTGGTGA+TGG | - | chr3.2:69752889-69752908 | MS.gene25879:intron | 50.0% | |
| GACGATCTTCCTTTGTCTGC+TGG | - | chr3.2:69752883-69752902 | MS.gene25879:intron | 50.0% | |
| GATGGTTGGAGCATGCAAAC+AGG | - | chr3.2:69753796-69753815 | MS.gene25879:CDS | 50.0% | |
| GTGAGAGCAGAAGATGCAAG+AGG | + | chr3.2:69753214-69753233 | None:intergenic | 50.0% | |
| TGAACAAGGCTAGGCCAAAG+AGG | - | chr3.2:69753757-69753776 | MS.gene25879:CDS | 50.0% | |
| TGACCATCACCAGCAGACAA+AGG | + | chr3.2:69752895-69752914 | None:intergenic | 50.0% | |
| TGCTGCATTCCTCATCACAG+TGG | + | chr3.2:69752554-69752573 | None:intergenic | 50.0% | |
| TTCTTCCACCTCAGCCCAAA+AGG | + | chr3.2:69753850-69753869 | None:intergenic | 50.0% | |
| ! | AGGCTAGGCCAAAGAGGTAT+AGG | - | chr3.2:69753763-69753782 | MS.gene25879:CDS | 50.0% |
| ! | ATCTACCTTTTGGGCTGAGG+TGG | - | chr3.2:69753842-69753861 | MS.gene25879:CDS | 50.0% |
| ! | GTGTTTACAGGGCACTCTTC+AGG | - | chr3.2:69752199-69752218 | MS.gene25879:CDS | 50.0% |
| ! | GTTTACAGGGCACTCTTCAG+GGG | - | chr3.2:69752201-69752220 | MS.gene25879:CDS | 50.0% |
| !! | GGCCTAGCCTTGTTCATGTA+AGG | + | chr3.2:69753753-69753772 | None:intergenic | 50.0% |
| !! | TGGTAATGGCCAGCTGATTG+TGG | - | chr3.2:69752693-69752712 | MS.gene25879:CDS | 50.0% |
| CGTCCCAAGCATGAGGGATT+TGG | - | chr3.2:69753452-69753471 | MS.gene25879:intron | 55.0% | |
| GACCAGTCCAAGGCTATCCA+GGG | + | chr3.2:69752938-69752957 | None:intergenic | 55.0% | |
| TGACCAGTCCAAGGCTATCC+AGG | + | chr3.2:69752939-69752958 | None:intergenic | 55.0% | |
| ! | GCACTCTTCAGGGGCTGTTT+TGG | - | chr3.2:69752210-69752229 | MS.gene25879:CDS | 55.0% |
| ! | GCTGGTGCTTGCAGGAGTAT+GGG | - | chr3.2:69753575-69753594 | MS.gene25879:intron | 55.0% |
| AGAAGGCCGTCCCAAGCATG+AGG | - | chr3.2:69753445-69753464 | MS.gene25879:intron | 60.0% | |
| ATCCAGGGCGGCTGCAATGT+CGG | + | chr3.2:69752923-69752942 | None:intergenic | 60.0% | |
| CAGTCCAAGGCTATCCAGGG+CGG | + | chr3.2:69752935-69752954 | None:intergenic | 60.0% | |
| CTAACTCGCCAGCTGCTCGA+AGG | + | chr3.2:69753377-69753396 | None:intergenic | 60.0% | |
| GAAGGCCGTCCCAAGCATGA+GGG | - | chr3.2:69753446-69753465 | MS.gene25879:intron | 60.0% | |
| GGCTGGTGCTTGCAGGAGTA+TGG | - | chr3.2:69753574-69753593 | MS.gene25879:intron | 60.0% | |
| GTGAAGAGGCTGGTGCTTGC+AGG | - | chr3.2:69753567-69753586 | MS.gene25879:intron | 60.0% | |
| CGACTGTGCCTTCGAGCAGC+TGG | - | chr3.2:69753366-69753385 | MS.gene25879:intron | 65.0% | |
| TACCGACATTGCAGCCGCCC+TGG | - | chr3.2:69752918-69752937 | MS.gene25879:intron | 65.0% | |
| ! | CGCCCTGGATAGCCTTGGAC+TGG | - | chr3.2:69752933-69752952 | MS.gene25879:intron | 65.0% |
| GCAGCCGCCCTGGATAGCCT+TGG | - | chr3.2:69752928-69752947 | MS.gene25879:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 69750923 | 69754082 | 69750923 | ID=MS.gene25879 |
| chr3.2 | mRNA | 69750923 | 69754082 | 69750923 | ID=MS.gene25879.t1;Parent=MS.gene25879 |
| chr3.2 | exon | 69753744 | 69754082 | 69753744 | ID=MS.gene25879.t1.exon1;Parent=MS.gene25879.t1 |
| chr3.2 | CDS | 69753744 | 69754082 | 69753744 | ID=cds.MS.gene25879.t1;Parent=MS.gene25879.t1 |
| chr3.2 | exon | 69752051 | 69752839 | 69752051 | ID=MS.gene25879.t1.exon2;Parent=MS.gene25879.t1 |
| chr3.2 | CDS | 69752051 | 69752839 | 69752051 | ID=cds.MS.gene25879.t1;Parent=MS.gene25879.t1 |
| chr3.2 | exon | 69750923 | 69751651 | 69750923 | ID=MS.gene25879.t1.exon3;Parent=MS.gene25879.t1 |
| chr3.2 | CDS | 69750923 | 69751651 | 69750923 | ID=cds.MS.gene25879.t1;Parent=MS.gene25879.t1 |
| Gene Sequence |
| Protein sequence |
