Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38408.t1 | XP_004501967.1 | 71.9 | 619 | 150 | 4 | 1 | 597 | 1 | 617 | 1.00E-250 | 875.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38408.t1 | Q9SU72 | 36.3 | 645 | 314 | 14 | 10 | 593 | 6 | 614 | 8.7e-97 | 355.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38408.t1 | A0A1S2YAK2 | 71.9 | 619 | 150 | 4 | 1 | 597 | 1 | 617 | 7.5e-251 | 875.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38408 | MS.gene022225 | PPI |
| MS.gene42360 | MS.gene38408 | PPI |
| MS.gene38414 | MS.gene38408 | PPI |
| MS.gene38392 | MS.gene38408 | PPI |
| MS.gene38408 | MS.gene074397 | PPI |
| MS.gene074397 | MS.gene38408 | PPI |
| MS.gene38399 | MS.gene38408 | PPI |
| MS.gene38404 | MS.gene38408 | PPI |
| MS.gene38408 | MS.gene044112 | PPI |
| MS.gene38408 | MS.gene022252 | PPI |
| MS.gene25879 | MS.gene38408 | PPI |
| MS.gene70582 | MS.gene38408 | PPI |
| MS.gene38408 | MS.gene062716 | PPI |
| MS.gene38408 | MS.gene25909 | PPI |
| MS.gene38408 | MS.gene014545 | PPI |
| MS.gene38408 | MS.gene26931 | PPI |
| MS.gene044112 | MS.gene38408 | PPI |
| MS.gene38408 | MS.gene69123 | PPI |
| MS.gene38408 | MS.gene27345 | PPI |
| MS.gene24315 | MS.gene38408 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38408.t1 | MTR_3g078633 | 74.637 | 619 | 134 | 3 | 1 | 597 | 1 | 618 | 0.0 | 945 |
| MS.gene38408.t1 | MTR_3g078633 | 77.515 | 507 | 112 | 2 | 92 | 597 | 41 | 546 | 0.0 | 816 |
| MS.gene38408.t1 | MTR_3g079340 | 50.161 | 622 | 260 | 11 | 11 | 597 | 10 | 616 | 0.0 | 585 |
| MS.gene38408.t1 | MTR_3g081450 | 81.818 | 99 | 18 | 0 | 486 | 584 | 32 | 130 | 1.21e-52 | 178 |
| MS.gene38408.t1 | MTR_8g494200 | 27.390 | 544 | 316 | 20 | 75 | 581 | 106 | 607 | 5.25e-47 | 175 |
| MS.gene38408.t1 | MTR_3g467360 | 25.634 | 355 | 208 | 13 | 256 | 578 | 209 | 539 | 1.47e-23 | 105 |
| MS.gene38408.t1 | MTR_3g467360 | 25.634 | 355 | 208 | 13 | 256 | 578 | 215 | 545 | 1.66e-23 | 105 |
| MS.gene38408.t1 | MTR_0095s0020 | 26.765 | 340 | 191 | 13 | 100 | 421 | 155 | 454 | 5.71e-22 | 100 |
| MS.gene38408.t1 | MTR_6g007985 | 25.208 | 361 | 209 | 14 | 258 | 583 | 136 | 470 | 7.98e-21 | 96.3 |
| MS.gene38408.t1 | MTR_6g008015 | 25.208 | 361 | 209 | 14 | 258 | 583 | 213 | 547 | 1.03e-20 | 96.7 |
| MS.gene38408.t1 | MTR_6g007975 | 24.033 | 362 | 203 | 14 | 258 | 579 | 213 | 542 | 1.60e-19 | 92.8 |
| MS.gene38408.t1 | MTR_6g008055 | 24.931 | 361 | 199 | 16 | 258 | 579 | 213 | 540 | 8.23e-18 | 87.4 |
| MS.gene38408.t1 | MTR_6g007980 | 24.370 | 357 | 210 | 13 | 256 | 578 | 209 | 539 | 6.99e-17 | 84.3 |
| MS.gene38408.t1 | MTR_6g007980 | 24.581 | 358 | 209 | 13 | 256 | 578 | 209 | 540 | 9.12e-17 | 84.3 |
| MS.gene38408.t1 | MTR_6g007980 | 24.513 | 359 | 209 | 13 | 256 | 578 | 209 | 541 | 9.81e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38408.t1 | AT3G48090 | 37.867 | 647 | 305 | 14 | 10 | 595 | 6 | 616 | 2.31e-129 | 393 |
| MS.gene38408.t1 | AT3G48080 | 37.382 | 634 | 312 | 16 | 10 | 586 | 6 | 611 | 5.12e-125 | 382 |
| MS.gene38408.t1 | AT3G48090 | 40.485 | 536 | 255 | 9 | 95 | 595 | 2 | 508 | 4.94e-123 | 373 |
| MS.gene38408.t1 | AT3G52430 | 24.242 | 363 | 217 | 12 | 248 | 577 | 175 | 512 | 1.03e-22 | 102 |
| MS.gene38408.t1 | AT5G14930 | 28.959 | 221 | 126 | 8 | 385 | 579 | 293 | 508 | 4.47e-16 | 82.0 |
Find 130 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGTCTTGTGAGCCTTTA+AGG | 0.163308 | 3.4:-63857559 | None:intergenic |
| AAATAGATTAAGATCTATTT+TGG | 0.185777 | 3.4:-63857697 | None:intergenic |
| TTCTTCCCTTCAAATTCTTC+TGG | 0.223579 | 3.4:-63860545 | None:intergenic |
| GTCATTTAAAGCTGTGTTAA+TGG | 0.225012 | 3.4:-63859748 | None:intergenic |
| TGGATACCGCCATGAGATTT+TGG | 0.228582 | 3.4:-63859081 | None:intergenic |
| CATCCCCAATGTGTTACTTT+TGG | 0.245116 | 3.4:+63859102 | MS.gene38408:CDS |
| GTTATTCGGAATCATGCTTT+TGG | 0.254796 | 3.4:+63860747 | MS.gene38408:CDS |
| GTGAAACTGCTTCAAATCTT+TGG | 0.255939 | 3.4:-63859257 | None:intergenic |
| AATATGTGATCTCCTATTAA+AGG | 0.264992 | 3.4:-63859129 | None:intergenic |
| GGCTAGAACTTGCAGGAGTA+TGG | 0.273354 | 3.4:+63860486 | MS.gene38408:CDS |
| TGGTGGACCAGTGGCAATTC+TGG | 0.279377 | 3.4:+63859026 | MS.gene38408:CDS |
| CTCGTTAAAGATTTGTCTTT+AGG | 0.287937 | 3.4:-63859291 | None:intergenic |
| CCGTGATGGACGTGTTTATA+TGG | 0.287982 | 3.4:+63860649 | MS.gene38408:CDS |
| GTCTCTTGCTGCGTCCTTAA+AGG | 0.312963 | 3.4:+63857545 | MS.gene38408:CDS |
| GAGAGGAGAAGGAGGTTATT+CGG | 0.313839 | 3.4:+63860733 | MS.gene38408:CDS |
| TGGCAATTCTGGCAACCCTT+TGG | 0.317237 | 3.4:+63859037 | MS.gene38408:CDS |
| GGTTGCACCAAAGGTTGTTT+TGG | 0.327486 | 3.4:-63857676 | None:intergenic |
| AAGGGTCTATAAGGACTAAA+AGG | 0.332391 | 3.4:-63859459 | None:intergenic |
| CATCAGGTGCTTTCCAAGAT+TGG | 0.336274 | 3.4:+63857649 | MS.gene38408:CDS |
| GGCAATTCTGGCAACCCTTT+GGG | 0.345081 | 3.4:+63859038 | MS.gene38408:CDS |
| TGTCATATCTCATCACAAAA+TGG | 0.352184 | 3.4:-63859194 | None:intergenic |
| GCATGCTGCTTGTAGGCTAA+TGG | 0.361589 | 3.4:+63859395 | MS.gene38408:CDS |
| AGTGGAGCAAGGAGGATTCT+TGG | 0.365623 | 3.4:-63859222 | None:intergenic |
| CGTCCACAGAGCGTATCTTT+TGG | 0.380680 | 3.4:-63860349 | None:intergenic |
| TTTAGTCCTTATAGACCCTT+TGG | 0.382405 | 3.4:+63859462 | MS.gene38408:CDS |
| TAGAAGACTAGTTGAGCCTT+TGG | 0.383000 | 3.4:+63860595 | MS.gene38408:CDS |
| CTGCACCAACATTTAAGTTA+TGG | 0.385595 | 3.4:+63859624 | MS.gene38408:CDS |
| GATTCTTCCCTATGCTGTAT+TGG | 0.390982 | 3.4:-63860935 | None:intergenic |
| TTGTCTGAGCATACTACTTC+AGG | 0.393030 | 3.4:+63859711 | MS.gene38408:CDS |
| TAAGTTCCAAAGGGTCTATA+AGG | 0.394319 | 3.4:-63859468 | None:intergenic |
| AAGAAAGAATGGGTTGAGAT+AGG | 0.400022 | 3.4:+63860563 | MS.gene38408:CDS |
| TCTAGAAGGTAGCGTCTATC+TGG | 0.400295 | 3.4:-63857579 | None:intergenic |
| CATGCTGCTTGTAGGCTAAT+GGG | 0.400935 | 3.4:+63859396 | MS.gene38408:CDS |
| ATGCTACAAGGAGAGAAAAT+TGG | 0.407091 | 3.4:+63859157 | MS.gene38408:CDS |
| ATCATCAGCTTTCCAGCATC+AGG | 0.410129 | 3.4:+63857633 | MS.gene38408:CDS |
| TCAAGCAGCAGCAGCATTAG+AGG | 0.410513 | 3.4:+63860295 | MS.gene38408:CDS |
| TTAAGTTATGGCACTGAACT+AGG | 0.410886 | 3.4:+63859636 | MS.gene38408:CDS |
| TCACAAGGCATGCTGCTTGT+AGG | 0.417204 | 3.4:+63859388 | MS.gene38408:CDS |
| TGGTAACAATGAACCTGGTT+TGG | 0.418486 | 3.4:+63857737 | MS.gene38408:CDS |
| CAGAAGCAAATAGTGTTTGC+AGG | 0.421391 | 3.4:+63858994 | MS.gene38408:CDS |
| GTGAGCAGGCTAGAACTTGC+AGG | 0.421924 | 3.4:+63860479 | MS.gene38408:CDS |
| GTGTTTGCAGGGCACTCATC+TGG | 0.428673 | 3.4:+63859006 | MS.gene38408:CDS |
| TTCAAATCTTTGGTCAAAAG+AGG | 0.433873 | 3.4:-63859247 | None:intergenic |
| TGGTATTCCAAAACAACCTT+TGG | 0.439187 | 3.4:+63857669 | MS.gene38408:CDS |
| CACATTTGCTTTGAAATCAT+CGG | 0.443023 | 3.4:-63860459 | None:intergenic |
| TTTCCTTCACTTAAAAGCAT+TGG | 0.443436 | 3.4:+63857717 | MS.gene38408:CDS |
| TCTGGCAACCCTTTGGGCCA+TGG | 0.444635 | 3.4:+63859044 | MS.gene38408:CDS |
| GGAAAGCTGATGATAACTTC+TGG | 0.445370 | 3.4:-63857624 | None:intergenic |
| AAGAGATGCAAGTGAGATCA+TGG | 0.446425 | 3.4:+63857497 | MS.gene38408:CDS |
| CTTCGAAGATGTTAAGGATA+GGG | 0.449060 | 3.4:+63860808 | MS.gene38408:CDS |
| ATGACCTGCAGAATTGCATC+AGG | 0.450270 | 3.4:-63859543 | None:intergenic |
| AGAACCAAAAGTAACACATT+GGG | 0.450634 | 3.4:-63859106 | None:intergenic |
| AAGGAACAACGAGAAAACTA+TGG | 0.450912 | 3.4:+63860325 | MS.gene38408:CDS |
| AATTTGAAGGGAAGAAAGAA+TGG | 0.451649 | 3.4:+63860552 | MS.gene38408:CDS |
| TGGAGTAAGAATAGTAAAGT+TGG | 0.456690 | 3.4:+63860860 | MS.gene38408:CDS |
| TCTTGGAAAGCACCTGATGC+TGG | 0.457233 | 3.4:-63857645 | None:intergenic |
| AAATCTTGAAGCTGAATGTT+GGG | 0.458634 | 3.4:+63859661 | MS.gene38408:CDS |
| TAGAGGAACAGATAAGTGAT+TGG | 0.460680 | 3.4:+63860840 | MS.gene38408:CDS |
| CAAATTACTATAGACATTCA+AGG | 0.461160 | 3.4:+63860624 | MS.gene38408:CDS |
| TAAGAATAGTAAAGTTGGTA+AGG | 0.475935 | 3.4:+63860865 | MS.gene38408:CDS |
| TGGAGTTAGGCAGGTTTCCA+TGG | 0.476117 | 3.4:-63859061 | None:intergenic |
| AAAATCTTGAAGCTGAATGT+TGG | 0.480384 | 3.4:+63859660 | MS.gene38408:CDS |
| GCAGGTTTCCATGGCCCAAA+GGG | 0.486239 | 3.4:-63859052 | None:intergenic |
| GAAGTAGTATGCTCAGACAA+TGG | 0.496499 | 3.4:-63859708 | None:intergenic |
| GAACTTCCAGAAGAATTTGA+AGG | 0.496758 | 3.4:+63860539 | MS.gene38408:CDS |
| AAAGTCCTTCGAAGATGTTA+AGG | 0.497847 | 3.4:+63860802 | MS.gene38408:CDS |
| AACACAGCTTTAAATGACCT+TGG | 0.498363 | 3.4:+63859753 | MS.gene38408:CDS |
| CCTTCGAAGATGTTAAGGAT+AGG | 0.505414 | 3.4:+63860807 | MS.gene38408:CDS |
| AGGTTACTACGATGCATTCA+AGG | 0.506073 | 3.4:+63860424 | MS.gene38408:CDS |
| TACATCTTCTGCACTACAAG+TGG | 0.509213 | 3.4:+63859489 | MS.gene38408:CDS |
| CAGCATTAGAGGAACGGAAA+AGG | 0.510218 | 3.4:+63860306 | MS.gene38408:CDS |
| CAGTGCCATAACTTAAATGT+TGG | 0.514185 | 3.4:-63859629 | None:intergenic |
| AACACTACCAATACAGCATA+GGG | 0.521717 | 3.4:+63860928 | MS.gene38408:CDS |
| AGCTTTAAATGACCTTGGCC+TGG | 0.523885 | 3.4:+63859758 | MS.gene38408:CDS |
| CAGGTATACACAAAGATGGT+TGG | 0.524361 | 3.4:+63860697 | MS.gene38408:CDS |
| AATGAACATGTAGGTGGAGA+GGG | 0.526247 | 3.4:+63858960 | MS.gene38408:intron |
| ACTCATCTCGGAAAAGCCAC+TGG | 0.530829 | 3.4:+63859321 | MS.gene38408:CDS |
| CATGCTGATAAGAGAGGAGA+AGG | 0.533278 | 3.4:+63860722 | MS.gene38408:CDS |
| GCTAGAACTTGCAGGAGTAT+GGG | 0.533503 | 3.4:+63860487 | MS.gene38408:CDS |
| GCAGAAGATGTAAGTTCCAA+AGG | 0.536622 | 3.4:-63859478 | None:intergenic |
| AAACCCTGATGCAATTCTGC+AGG | 0.537767 | 3.4:+63859539 | MS.gene38408:CDS |
| ATTTGAAGGGAAGAAAGAAT+GGG | 0.545051 | 3.4:+63860553 | MS.gene38408:CDS |
| TCATCACAAAATGGAAGAAG+TGG | 0.551943 | 3.4:-63859185 | None:intergenic |
| AGATACGCTCTGTGGACGAT+AGG | 0.552326 | 3.4:+63860354 | MS.gene38408:CDS |
| GGCAGGTTTCCATGGCCCAA+AGG | 0.553099 | 3.4:-63859053 | None:intergenic |
| AACTTCCAGAAGAATTTGAA+GGG | 0.556815 | 3.4:+63860540 | MS.gene38408:CDS |
| GATACAGGTATACACAAAGA+TGG | 0.557227 | 3.4:+63860693 | MS.gene38408:CDS |
| AAACACTACCAATACAGCAT+AGG | 0.558238 | 3.4:+63860927 | MS.gene38408:CDS |
| ACGAGCAAATCGACTCATCT+CGG | 0.558539 | 3.4:+63859309 | MS.gene38408:CDS |
| ATTTCAAAGCAAATGTGAGC+AGG | 0.560036 | 3.4:+63860465 | MS.gene38408:CDS |
| AGCATTGGTAACAATGAACC+TGG | 0.562510 | 3.4:+63857732 | MS.gene38408:CDS |
| CAGCAGTTACAGAGAAATGA+GGG | 0.565648 | 3.4:+63860388 | MS.gene38408:CDS |
| GAGAACCAAAAGTAACACAT+TGG | 0.565808 | 3.4:-63859107 | None:intergenic |
| CAAAAGTAACACATTGGGGA+TGG | 0.570292 | 3.4:-63859101 | None:intergenic |
| CAGAAGATGTAAGTTCCAAA+GGG | 0.580677 | 3.4:-63859477 | None:intergenic |
| GCTGATAAGAGAGGAGAAGG+AGG | 0.581639 | 3.4:+63860725 | MS.gene38408:CDS |
| TTTGCAGGGCACTCATCTGG+TGG | 0.585914 | 3.4:+63859009 | MS.gene38408:CDS |
| CCTATCCTTAACATCTTCGA+AGG | 0.587211 | 3.4:-63860807 | None:intergenic |
| AGAAGCAAATAGTGTTTGCA+GGG | 0.594581 | 3.4:+63858995 | MS.gene38408:CDS |
| TCAGCAGTTACAGAGAAATG+AGG | 0.597030 | 3.4:+63860387 | MS.gene38408:CDS |
| AATGTTTACTTACCAGGCCA+AGG | 0.598222 | 3.4:-63859770 | None:intergenic |
| TAATGAACATGTAGGTGGAG+AGG | 0.598485 | 3.4:+63858959 | MS.gene38408:intron |
| CAGCAGCAGCATTAGAGGAA+CGG | 0.598954 | 3.4:+63860300 | MS.gene38408:CDS |
| TGCCTAACTCCAAAATCTCA+TGG | 0.604932 | 3.4:+63859072 | MS.gene38408:CDS |
| CGTGTTTATATGGCTAAAGG+TGG | 0.606548 | 3.4:+63860659 | MS.gene38408:CDS |
| CAAAAGAGGAGAGTGGAGCA+AGG | 0.609151 | 3.4:-63859233 | None:intergenic |
| AAGCTGATGATAACTTCTGG+AGG | 0.614993 | 3.4:-63857621 | None:intergenic |
| AGGGTTGCCAGAATTGCCAC+TGG | 0.615205 | 3.4:-63859033 | None:intergenic |
| GCACTCATCTGGTGGACCAG+TGG | 0.616635 | 3.4:+63859017 | MS.gene38408:CDS |
| TAGTAATTTGCAATATCCAA+AGG | 0.619711 | 3.4:-63860611 | None:intergenic |
| GGACGTGTTTATATGGCTAA+AGG | 0.620483 | 3.4:+63860656 | MS.gene38408:CDS |
| CAAATGCTGCAACTGTCACA+AGG | 0.620723 | 3.4:+63859373 | MS.gene38408:CDS |
| TTTATATGGCTAAAGGTGGA+AGG | 0.627178 | 3.4:+63860663 | MS.gene38408:CDS |
| AGAGATGCAAGTGAGATCAT+GGG | 0.629840 | 3.4:+63857498 | MS.gene38408:CDS |
| CCATATAAACACGTCCATCA+CGG | 0.630887 | 3.4:-63860649 | None:intergenic |
| GTAGAAATCTGAAGTTCCAG+TGG | 0.638315 | 3.4:-63859337 | None:intergenic |
| CTTTGGTCAAAAGAGGAGAG+TGG | 0.641603 | 3.4:-63859240 | None:intergenic |
| AGCTGATGATAACTTCTGGA+GGG | 0.644106 | 3.4:-63857620 | None:intergenic |
| AGACATTCAAGGAACCGTGA+TGG | 0.644212 | 3.4:+63860635 | MS.gene38408:CDS |
| TTGGAACATGCTGATAAGAG+AGG | 0.656972 | 3.4:+63860716 | MS.gene38408:CDS |
| GAACCAAAAGTAACACATTG+GGG | 0.672795 | 3.4:-63859105 | None:intergenic |
| TGACCTGCAGAATTGCATCA+GGG | 0.673677 | 3.4:-63859542 | None:intergenic |
| TGAGTGCAGAGCGAATTGAG+AGG | 0.675389 | 3.4:+63857523 | MS.gene38408:CDS |
| TAGGCTAATGGGAACAACGG+CGG | 0.682497 | 3.4:+63859407 | MS.gene38408:CDS |
| TCTGAGCATACTACTTCAGG+AGG | 0.698901 | 3.4:+63859714 | MS.gene38408:CDS |
| AAGAGGAGAGTGGAGCAAGG+AGG | 0.703415 | 3.4:-63859230 | None:intergenic |
| GGACCAAAAGATACGCTCTG+TGG | 0.707399 | 3.4:+63860346 | MS.gene38408:CDS |
| TTGTAGGCTAATGGGAACAA+CGG | 0.746819 | 3.4:+63859404 | MS.gene38408:CDS |
| AGCAGTTACAGAGAAATGAG+GGG | 0.764549 | 3.4:+63860389 | MS.gene38408:CDS |
| CTAACTCCAAAATCTCATGG+CGG | 0.783970 | 3.4:+63859075 | MS.gene38408:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr3.4:63857886-63857867 | None:intergenic | 0.0% |
| !!! | AAAAAGTTCAATTTTAAAAT+GGG | + | chr3.4:63858730-63858749 | MS.gene38408:intron | 10.0% |
| !!! | ATATTACTCTTTTTTTTTAA+AGG | + | chr3.4:63860149-63860168 | MS.gene38408:intron | 10.0% |
| !! | AATTTGTGAATTTGATAAAA+TGG | + | chr3.4:63858761-63858780 | MS.gene38408:intron | 15.0% |
| !! | ACACAAAAATTAAATGTTTA+AGG | - | chr3.4:63859920-63859939 | None:intergenic | 15.0% |
| !! | ATTGTAGAAAGTAAAAATAT+TGG | + | chr3.4:63858144-63858163 | MS.gene38408:intron | 15.0% |
| !! | TTTCTTGAATTTCATAAAAT+AGG | - | chr3.4:63858529-63858548 | None:intergenic | 15.0% |
| !!! | AAAAGTTCAATTTTAAAATG+GGG | + | chr3.4:63858731-63858750 | MS.gene38408:intron | 15.0% |
| !!! | AAATAGATTAAGATCTATTT+TGG | - | chr3.4:63857700-63857719 | None:intergenic | 15.0% |
| !!! | ATATATTTTAATGAACATGT+AGG | + | chr3.4:63858951-63858970 | MS.gene38408:intron | 15.0% |
| !!! | ATCAATTAAACTAATTGTTT+TGG | - | chr3.4:63858040-63858059 | None:intergenic | 15.0% |
| !!! | CAAAAAGTTCAATTTTAAAA+TGG | + | chr3.4:63858729-63858748 | MS.gene38408:intron | 15.0% |
| !!! | TAAAAATATTGGTTTGATTA+CGG | + | chr3.4:63858155-63858174 | MS.gene38408:intron | 15.0% |
| !!! | TAATACTTTTATGTATTAGT+TGG | + | chr3.4:63860023-63860042 | MS.gene38408:intron | 15.0% |
| !!! | TTAAATGTTTAAGGTTTTTT+AGG | - | chr3.4:63859911-63859930 | None:intergenic | 15.0% |
| !!! | TTTTATGAAATTCAAGAAAA+TGG | + | chr3.4:63858530-63858549 | MS.gene38408:intron | 15.0% |
| !! | AATATTTGAGCATATCATTA+AGG | - | chr3.4:63858082-63858101 | None:intergenic | 20.0% |
| !! | AATATTTGAGCATATCATTT+AGG | - | chr3.4:63858420-63858439 | None:intergenic | 20.0% |
| !! | AATGCTTTGTCAAAAAAAAA+AGG | - | chr3.4:63857979-63857998 | None:intergenic | 20.0% |
| !! | ACTTTCTACAATTATTGAAA+AGG | - | chr3.4:63858474-63858493 | None:intergenic | 20.0% |
| !! | CTTAAAAAAATAGTGATTGT+TGG | - | chr3.4:63858656-63858675 | None:intergenic | 20.0% |
| !! | TACAACAAATGTAATAATTG+AGG | - | chr3.4:63858583-63858602 | None:intergenic | 20.0% |
| !! | TATATATGGTTAAGATAGAT+AGG | - | chr3.4:63857853-63857872 | None:intergenic | 20.0% |
| !! | TTTGTCAAAAAAAAAAGGTA+TGG | - | chr3.4:63858310-63858329 | None:intergenic | 20.0% |
| !!! | AAATATTGGTTTGATTAATG+TGG | + | chr3.4:63858158-63858177 | MS.gene38408:intron | 20.0% |
| !!! | AACATTTTTATCCTTATCTA+TGG | + | chr3.4:63859787-63859806 | MS.gene38408:intron | 20.0% |
| !!! | AATGTTACATTCTTTATTTG+AGG | + | chr3.4:63858923-63858942 | MS.gene38408:intron | 20.0% |
| !!! | CAACAATCACTATTTTTTTA+AGG | + | chr3.4:63858654-63858673 | MS.gene38408:intron | 20.0% |
| !!! | CAATTAAACACTAATTGTTT+TGG | - | chr3.4:63858376-63858395 | None:intergenic | 20.0% |
| !!! | CACTTTTAGCTTTAAAAAAA+AGG | + | chr3.4:63858620-63858639 | MS.gene38408:intron | 20.0% |
| !!! | GATTTATTTAATTTGCTTCT+AGG | - | chr3.4:63860056-63860075 | None:intergenic | 20.0% |
| !!! | GTTTGATTTATTTGCAATTT+TGG | - | chr3.4:63858791-63858810 | None:intergenic | 20.0% |
| !!! | TTTTTTAAAGCTAAAAGTGA+GGG | - | chr3.4:63858619-63858638 | None:intergenic | 20.0% |
| !!! | TTTTTTAAAGGAAGAGAAAA+TGG | + | chr3.4:63860161-63860180 | MS.gene38408:intron | 20.0% |
| !!! | TTTTTTTAAAGCTAAAAGTG+AGG | - | chr3.4:63858620-63858639 | None:intergenic | 20.0% |
| ! | AAAAATTGATTAACCAAACC+AGG | - | chr3.4:63857753-63857772 | None:intergenic | 25.0% |
| ! | AATATGTGATCTCCTATTAA+AGG | - | chr3.4:63859132-63859151 | None:intergenic | 25.0% |
| ! | AGCTAAAGATCTATTTAGAA+TGG | - | chr3.4:63860081-63860100 | None:intergenic | 25.0% |
| ! | CAAATTACTATAGACATTCA+AGG | + | chr3.4:63860624-63860643 | MS.gene38408:CDS | 25.0% |
| ! | CTTGAATTTCATAAAATAGG+AGG | - | chr3.4:63858526-63858545 | None:intergenic | 25.0% |
| ! | CTTTGTCAAAAAAAAAGGTA+TGG | - | chr3.4:63857975-63857994 | None:intergenic | 25.0% |
| ! | GAATGCTTTGTCAAAAAAAA+AGG | - | chr3.4:63857980-63857999 | None:intergenic | 25.0% |
| ! | GATAAAAATGTTTACTTACC+AGG | - | chr3.4:63859779-63859798 | None:intergenic | 25.0% |
| ! | TTGCATAACTAGATCATATA+CGG | - | chr3.4:63858252-63858271 | None:intergenic | 25.0% |
| ! | TTGTGAATTTGATAAAATGG+AGG | + | chr3.4:63858764-63858783 | MS.gene38408:intron | 25.0% |
| !! | AATAATCACATTGATTGACT+TGG | + | chr3.4:63859843-63859862 | MS.gene38408:intron | 25.0% |
| !! | TAGTAATTTGCAATATCCAA+AGG | - | chr3.4:63860614-63860633 | None:intergenic | 25.0% |
| !!! | ACAATGGAATATTTTCTAGT+TGG | - | chr3.4:63859695-63859714 | None:intergenic | 25.0% |
| !!! | ATCATATGGATTTGTTAGAA+AGG | + | chr3.4:63858895-63858914 | MS.gene38408:intron | 25.0% |
| !!! | CATTTTTAGCATTAGTAGAT+AGG | - | chr3.4:63858015-63858034 | None:intergenic | 25.0% |
| !!! | TAAGAATAGTAAAGTTGGTA+AGG | + | chr3.4:63860865-63860884 | MS.gene38408:CDS | 25.0% |
| !!! | TATTTTAATGAACATGTAGG+TGG | + | chr3.4:63858954-63858973 | MS.gene38408:intron | 25.0% |
| !!! | TTTAATTTGCTTCTAGGTTT+AGG | - | chr3.4:63860050-63860069 | None:intergenic | 25.0% |
| AAAATCTTGAAGCTGAATGT+TGG | + | chr3.4:63859660-63859679 | MS.gene38408:CDS | 30.0% | |
| AAACACAAAAGCCATAGATA+AGG | - | chr3.4:63859801-63859820 | None:intergenic | 30.0% | |
| AAATCTTGAAGCTGAATGTT+GGG | + | chr3.4:63859661-63859680 | MS.gene38408:CDS | 30.0% | |
| AACTTCCAGAAGAATTTGAA+GGG | + | chr3.4:63860540-63860559 | MS.gene38408:CDS | 30.0% | |
| AATTTGAAGGGAAGAAAGAA+TGG | + | chr3.4:63860552-63860571 | MS.gene38408:CDS | 30.0% | |
| AGAACCAAAAGTAACACATT+GGG | - | chr3.4:63859109-63859128 | None:intergenic | 30.0% | |
| ATTTGAAGGGAAGAAAGAAT+GGG | + | chr3.4:63860553-63860572 | MS.gene38408:CDS | 30.0% | |
| CATTAGTAGATAGGATAGTT+AGG | - | chr3.4:63858006-63858025 | None:intergenic | 30.0% | |
| CTCGTTAAAGATTTGTCTTT+AGG | - | chr3.4:63859294-63859313 | None:intergenic | 30.0% | |
| TGGAGTAAGAATAGTAAAGT+TGG | + | chr3.4:63860860-63860879 | MS.gene38408:CDS | 30.0% | |
| TGTCATATCTCATCACAAAA+TGG | - | chr3.4:63859197-63859216 | None:intergenic | 30.0% | |
| TTCAAATCTTTGGTCAAAAG+AGG | - | chr3.4:63859250-63859269 | None:intergenic | 30.0% | |
| ! | AAAGGTATGGATGCTAAAAA+AGG | - | chr3.4:63858297-63858316 | None:intergenic | 30.0% |
| ! | AAAGGTATGGATGCTATAAA+AGG | - | chr3.4:63857962-63857981 | None:intergenic | 30.0% |
| ! | ACATATTTTCTCATGCTACA+AGG | + | chr3.4:63859145-63859164 | MS.gene38408:CDS | 30.0% |
| ! | CTACACATCAAGCATTTTAT+TGG | - | chr3.4:63858206-63858225 | None:intergenic | 30.0% |
| ! | GTCATTTAAAGCTGTGTTAA+TGG | - | chr3.4:63859751-63859770 | None:intergenic | 30.0% |
| ! | TGTGTATACCTGTATCTTTT+TGG | - | chr3.4:63860689-63860708 | None:intergenic | 30.0% |
| ! | TTATTCGGAATCATGCTTTT+GGG | + | chr3.4:63860748-63860767 | MS.gene38408:CDS | 30.0% |
| ! | TTCTGTTGTTCTTTTCTAGA+AGG | - | chr3.4:63857596-63857615 | None:intergenic | 30.0% |
| ! | TTTCCTTCACTTAAAAGCAT+TGG | + | chr3.4:63857717-63857736 | MS.gene38408:CDS | 30.0% |
| !! | AAACGTTTTGAGTGAATATG+CGG | - | chr3.4:63859872-63859891 | None:intergenic | 30.0% |
| !! | ATTGAAAAGGTACTACAAAG+AGG | - | chr3.4:63858461-63858480 | None:intergenic | 30.0% |
| !! | CACATTTGCTTTGAAATCAT+CGG | - | chr3.4:63860462-63860481 | None:intergenic | 30.0% |
| !! | TTACCAATGCTTTTAAGTGA+AGG | - | chr3.4:63857723-63857742 | None:intergenic | 30.0% |
| !!! | ACTTTTGGTTCTCCTTTAAT+AGG | + | chr3.4:63859117-63859136 | MS.gene38408:CDS | 30.0% |
| !!! | TATTGGTTTGATTACGGTTT+TGG | + | chr3.4:63858499-63858518 | MS.gene38408:intron | 30.0% |
| !!! | TTGTTTTGGAATACCAATCT+TGG | - | chr3.4:63857665-63857684 | None:intergenic | 30.0% |
| !!! | TTTTTTAAGGCCAAAAGTCA+AGG | + | chr3.4:63858667-63858686 | MS.gene38408:intron | 30.0% |
| AAACACTACCAATACAGCAT+AGG | + | chr3.4:63860927-63860946 | MS.gene38408:CDS | 35.0% | |
| AAAGTCCTTCGAAGATGTTA+AGG | + | chr3.4:63860802-63860821 | MS.gene38408:CDS | 35.0% | |
| AACACTACCAATACAGCATA+GGG | + | chr3.4:63860928-63860947 | MS.gene38408:CDS | 35.0% | |
| AAGGAACAACGAGAAAACTA+TGG | + | chr3.4:63860325-63860344 | MS.gene38408:CDS | 35.0% | |
| AAGGGTCTATAAGGACTAAA+AGG | - | chr3.4:63859462-63859481 | None:intergenic | 35.0% | |
| AGAAGCAAATAGTGTTTGCA+GGG | + | chr3.4:63858995-63859014 | MS.gene38408:CDS | 35.0% | |
| ATGACTTTGCCAAAATCTGT+TGG | - | chr3.4:63857788-63857807 | None:intergenic | 35.0% | |
| ATGCTACAAGGAGAGAAAAT+TGG | + | chr3.4:63859157-63859176 | MS.gene38408:CDS | 35.0% | |
| ATTTCAAAGCAAATGTGAGC+AGG | + | chr3.4:63860465-63860484 | MS.gene38408:CDS | 35.0% | |
| CAGAAGATGTAAGTTCCAAA+GGG | - | chr3.4:63859480-63859499 | None:intergenic | 35.0% | |
| CAGTGCCATAACTTAAATGT+TGG | - | chr3.4:63859632-63859651 | None:intergenic | 35.0% | |
| CCAAAATCTGTTGGAATCTT+TGG | - | chr3.4:63857779-63857798 | None:intergenic | 35.0% | |
| CTTCGAAGATGTTAAGGATA+GGG | + | chr3.4:63860808-63860827 | MS.gene38408:CDS | 35.0% | |
| GAACCAAAAGTAACACATTG+GGG | - | chr3.4:63859108-63859127 | None:intergenic | 35.0% | |
| GAACTTCCAGAAGAATTTGA+AGG | + | chr3.4:63860539-63860558 | MS.gene38408:CDS | 35.0% | |
| GAGAACCAAAAGTAACACAT+TGG | - | chr3.4:63859110-63859129 | None:intergenic | 35.0% | |
| GATACAGGTATACACAAAGA+TGG | + | chr3.4:63860693-63860712 | MS.gene38408:CDS | 35.0% | |
| GTATGGATGCTAAAAAAGGA+AGG | - | chr3.4:63858293-63858312 | None:intergenic | 35.0% | |
| GTCATCATCATTCGAATATC+AGG | + | chr3.4:63857803-63857822 | MS.gene38408:intron | 35.0% | |
| GTGAAACTGCTTCAAATCTT+TGG | - | chr3.4:63859260-63859279 | None:intergenic | 35.0% | |
| TAAAGCTAAAAGTGAGGGTT+GGG | - | chr3.4:63858614-63858633 | None:intergenic | 35.0% | |
| TAAGTTCCAAAGGGTCTATA+AGG | - | chr3.4:63859471-63859490 | None:intergenic | 35.0% | |
| TACAAAGAGGAAATCTCACA+TGG | - | chr3.4:63858448-63858467 | None:intergenic | 35.0% | |
| TACAAAGTGGAAATCTCACA+TGG | - | chr3.4:63858110-63858129 | None:intergenic | 35.0% | |
| TAGAGGAACAGATAAGTGAT+TGG | + | chr3.4:63860840-63860859 | MS.gene38408:CDS | 35.0% | |
| TCATCACAAAATGGAAGAAG+TGG | - | chr3.4:63859188-63859207 | None:intergenic | 35.0% | |
| TGGGATCAAAATTGCAACAA+AGG | + | chr3.4:63858691-63858710 | MS.gene38408:intron | 35.0% | |
| TGGTATTCCAAAACAACCTT+TGG | + | chr3.4:63857669-63857688 | MS.gene38408:CDS | 35.0% | |
| TTAAAGCTAAAAGTGAGGGT+TGG | - | chr3.4:63858615-63858634 | None:intergenic | 35.0% | |
| TTCTTCCCTTCAAATTCTTC+TGG | - | chr3.4:63860548-63860567 | None:intergenic | 35.0% | |
| TTTAGTCCTTATAGACCCTT+TGG | + | chr3.4:63859462-63859481 | MS.gene38408:CDS | 35.0% | |
| TTTATATGGCTAAAGGTGGA+AGG | + | chr3.4:63860663-63860682 | MS.gene38408:CDS | 35.0% | |
| ! | AGTTCAAGCTCGACTATTTT+AGG | - | chr3.4:63858829-63858848 | None:intergenic | 35.0% |
| ! | ATGTTGGTGCAGACTTTTAT+CGG | - | chr3.4:63859616-63859635 | None:intergenic | 35.0% |
| ! | CCAAAGATTCCAACAGATTT+TGG | + | chr3.4:63857776-63857795 | MS.gene38408:intron | 35.0% |
| ! | CTGCACCAACATTTAAGTTA+TGG | + | chr3.4:63859624-63859643 | MS.gene38408:CDS | 35.0% |
| ! | GTTATTCGGAATCATGCTTT+TGG | + | chr3.4:63860747-63860766 | MS.gene38408:CDS | 35.0% |
| ! | TTAAGTTATGGCACTGAACT+AGG | + | chr3.4:63859636-63859655 | MS.gene38408:CDS | 35.0% |
| !! | AACACAGCTTTAAATGACCT+TGG | + | chr3.4:63859753-63859772 | MS.gene38408:CDS | 35.0% |
| !! | AAGAAAGAATGGGTTGAGAT+AGG | + | chr3.4:63860563-63860582 | MS.gene38408:CDS | 35.0% |
| !! | AGGGTTCTACTTTTGTTAAG+TGG | + | chr3.4:63860900-63860919 | MS.gene38408:CDS | 35.0% |
| !! | ATCGAAAAAGTGCTACAAAG+TGG | - | chr3.4:63858123-63858142 | None:intergenic | 35.0% |
| !! | GTTCTACTTTTGTTAAGTGG+TGG | + | chr3.4:63860903-63860922 | MS.gene38408:CDS | 35.0% |
| !!! | AGTTGGTAAGGATGTGTTTT+TGG | + | chr3.4:63860877-63860896 | MS.gene38408:CDS | 35.0% |
| !!! | ATCTATTTTGGTTGCACCAA+AGG | - | chr3.4:63857688-63857707 | None:intergenic | 35.0% |
| !!! | GGATAGGGTTTTAAAGTTAG+AGG | + | chr3.4:63860823-63860842 | MS.gene38408:CDS | 35.0% |
| AAGAGATGCAAGTGAGATCA+TGG | + | chr3.4:63857497-63857516 | MS.gene38408:CDS | 40.0% | |
| AAGCTGATGATAACTTCTGG+AGG | - | chr3.4:63857624-63857643 | None:intergenic | 40.0% | |
| AATGAACATGTAGGTGGAGA+GGG | + | chr3.4:63858960-63858979 | MS.gene38408:intron | 40.0% | |
| AATGTTTACTTACCAGGCCA+AGG | - | chr3.4:63859773-63859792 | None:intergenic | 40.0% | |
| AGAGATGCAAGTGAGATCAT+GGG | + | chr3.4:63857498-63857517 | MS.gene38408:CDS | 40.0% | |
| AGCAGTTACAGAGAAATGAG+GGG | + | chr3.4:63860389-63860408 | MS.gene38408:CDS | 40.0% | |
| AGCTGATGATAACTTCTGGA+GGG | - | chr3.4:63857623-63857642 | None:intergenic | 40.0% | |
| AGGTTACTACGATGCATTCA+AGG | + | chr3.4:63860424-63860443 | MS.gene38408:CDS | 40.0% | |
| ATGAGGGGACATCAGAAAAA+AGG | + | chr3.4:63860404-63860423 | MS.gene38408:CDS | 40.0% | |
| CAAAAGTAACACATTGGGGA+TGG | - | chr3.4:63859104-63859123 | None:intergenic | 40.0% | |
| CAGAAGCAAATAGTGTTTGC+AGG | + | chr3.4:63858994-63859013 | MS.gene38408:CDS | 40.0% | |
| CAGCAGTTACAGAGAAATGA+GGG | + | chr3.4:63860388-63860407 | MS.gene38408:CDS | 40.0% | |
| CAGGTATACACAAAGATGGT+TGG | + | chr3.4:63860697-63860716 | MS.gene38408:CDS | 40.0% | |
| CCATATAAACACGTCCATCA+CGG | - | chr3.4:63860652-63860671 | None:intergenic | 40.0% | |
| CCTATCCTTAACATCTTCGA+AGG | - | chr3.4:63860810-63860829 | None:intergenic | 40.0% | |
| CCTTCGAAGATGTTAAGGAT+AGG | + | chr3.4:63860807-63860826 | MS.gene38408:CDS | 40.0% | |
| CGTGTTTATATGGCTAAAGG+TGG | + | chr3.4:63860659-63860678 | MS.gene38408:CDS | 40.0% | |
| CTAACTCCAAAATCTCATGG+CGG | + | chr3.4:63859075-63859094 | MS.gene38408:CDS | 40.0% | |
| GAAGTAGTATGCTCAGACAA+TGG | - | chr3.4:63859711-63859730 | None:intergenic | 40.0% | |
| GATTCTTCCCTATGCTGTAT+TGG | - | chr3.4:63860938-63860957 | None:intergenic | 40.0% | |
| GCAGAAGATGTAAGTTCCAA+AGG | - | chr3.4:63859481-63859500 | None:intergenic | 40.0% | |
| GCTCACTGTCAAAGATCATA+TGG | + | chr3.4:63858881-63858900 | MS.gene38408:intron | 40.0% | |
| GGAAAGCTGATGATAACTTC+TGG | - | chr3.4:63857627-63857646 | None:intergenic | 40.0% | |
| GGACGTGTTTATATGGCTAA+AGG | + | chr3.4:63860656-63860675 | MS.gene38408:CDS | 40.0% | |
| TAATGAACATGTAGGTGGAG+AGG | + | chr3.4:63858959-63858978 | MS.gene38408:intron | 40.0% | |
| TACATCTTCTGCACTACAAG+TGG | + | chr3.4:63859489-63859508 | MS.gene38408:CDS | 40.0% | |
| TCAGCAGTTACAGAGAAATG+AGG | + | chr3.4:63860387-63860406 | MS.gene38408:CDS | 40.0% | |
| TGCCTAACTCCAAAATCTCA+TGG | + | chr3.4:63859072-63859091 | MS.gene38408:CDS | 40.0% | |
| TGGTAACAATGAACCTGGTT+TGG | + | chr3.4:63857737-63857756 | MS.gene38408:CDS | 40.0% | |
| TTGGAACATGCTGATAAGAG+AGG | + | chr3.4:63860716-63860735 | MS.gene38408:CDS | 40.0% | |
| TTGTAGGCTAATGGGAACAA+CGG | + | chr3.4:63859404-63859423 | MS.gene38408:CDS | 40.0% | |
| TTGTCTGAGCATACTACTTC+AGG | + | chr3.4:63859711-63859730 | MS.gene38408:CDS | 40.0% | |
| ! | GTAGAAATCTGAAGTTCCAG+TGG | - | chr3.4:63859340-63859359 | None:intergenic | 40.0% |
| ! | TAGAAGACTAGTTGAGCCTT+TGG | + | chr3.4:63860595-63860614 | MS.gene38408:CDS | 40.0% |
| !! | AGCATTGGTAACAATGAACC+TGG | + | chr3.4:63857732-63857751 | MS.gene38408:CDS | 40.0% |
| !!! | ATGAGATTTTGGAGTTAGGC+AGG | - | chr3.4:63859073-63859092 | None:intergenic | 40.0% |
| !!! | CATCCCCAATGTGTTACTTT+TGG | + | chr3.4:63859102-63859121 | MS.gene38408:CDS | 40.0% |
| !!! | GGTAAGGATGTGTTTTTGGA+GGG | + | chr3.4:63860881-63860900 | MS.gene38408:CDS | 40.0% |
| !!! | TGGTAAGGATGTGTTTTTGG+AGG | + | chr3.4:63860880-63860899 | MS.gene38408:CDS | 40.0% |
| AAACCCTGATGCAATTCTGC+AGG | + | chr3.4:63859539-63859558 | MS.gene38408:CDS | 45.0% | |
| AGACATTCAAGGAACCGTGA+TGG | + | chr3.4:63860635-63860654 | MS.gene38408:CDS | 45.0% | |
| ATCATCAGCTTTCCAGCATC+AGG | + | chr3.4:63857633-63857652 | MS.gene38408:CDS | 45.0% | |
| ATGACCTGCAGAATTGCATC+AGG | - | chr3.4:63859546-63859565 | None:intergenic | 45.0% | |
| CAAATGCTGCAACTGTCACA+AGG | + | chr3.4:63859373-63859392 | MS.gene38408:CDS | 45.0% | |
| CAGCATTAGAGGAACGGAAA+AGG | + | chr3.4:63860306-63860325 | MS.gene38408:CDS | 45.0% | |
| CATCAGGTGCTTTCCAAGAT+TGG | + | chr3.4:63857649-63857668 | MS.gene38408:CDS | 45.0% | |
| CATGCTGATAAGAGAGGAGA+AGG | + | chr3.4:63860722-63860741 | MS.gene38408:CDS | 45.0% | |
| CTTTGGTCAAAAGAGGAGAG+TGG | - | chr3.4:63859243-63859262 | None:intergenic | 45.0% | |
| GAGAGGAGAAGGAGGTTATT+CGG | + | chr3.4:63860733-63860752 | MS.gene38408:CDS | 45.0% | |
| GTGGAAGGCCAAAAAGATAC+AGG | + | chr3.4:63860678-63860697 | MS.gene38408:CDS | 45.0% | |
| TAAGGCCAAAAGTCAAGGCT+GGG | + | chr3.4:63858672-63858691 | MS.gene38408:intron | 45.0% | |
| TCTAGAAGGTAGCGTCTATC+TGG | - | chr3.4:63857582-63857601 | None:intergenic | 45.0% | |
| TCTGAGCATACTACTTCAGG+AGG | + | chr3.4:63859714-63859733 | MS.gene38408:CDS | 45.0% | |
| TGACCTGCAGAATTGCATCA+GGG | - | chr3.4:63859545-63859564 | None:intergenic | 45.0% | |
| TGGTGTCTTGTGAGCCTTTA+AGG | - | chr3.4:63857562-63857581 | None:intergenic | 45.0% | |
| TTAAGGCCAAAAGTCAAGGC+TGG | + | chr3.4:63858671-63858690 | MS.gene38408:intron | 45.0% | |
| ! | ACGAGCAAATCGACTCATCT+CGG | + | chr3.4:63859309-63859328 | MS.gene38408:CDS | 45.0% |
| ! | CATGCTGCTTGTAGGCTAAT+GGG | + | chr3.4:63859396-63859415 | MS.gene38408:CDS | 45.0% |
| ! | GCTAGAACTTGCAGGAGTAT+GGG | + | chr3.4:63860487-63860506 | MS.gene38408:CDS | 45.0% |
| ! | GGTTGCACCAAAGGTTGTTT+TGG | - | chr3.4:63857679-63857698 | None:intergenic | 45.0% |
| ! | TGGATACCGCCATGAGATTT+TGG | - | chr3.4:63859084-63859103 | None:intergenic | 45.0% |
| ! | TTGATCCCAGCCTTGACTTT+TGG | - | chr3.4:63858680-63858699 | None:intergenic | 45.0% |
| !! | AGCTTTAAATGACCTTGGCC+TGG | + | chr3.4:63859758-63859777 | MS.gene38408:CDS | 45.0% |
| !! | CCGTGATGGACGTGTTTATA+TGG | + | chr3.4:63860649-63860668 | MS.gene38408:CDS | 45.0% |
| !!! | CGCCATGAGATTTTGGAGTT+AGG | - | chr3.4:63859077-63859096 | None:intergenic | 45.0% |
| ACTCATCTCGGAAAAGCCAC+TGG | + | chr3.4:63859321-63859340 | MS.gene38408:CDS | 50.0% | |
| AGATACGCTCTGTGGACGAT+AGG | + | chr3.4:63860354-63860373 | MS.gene38408:CDS | 50.0% | |
| AGTGGAGCAAGGAGGATTCT+TGG | - | chr3.4:63859225-63859244 | None:intergenic | 50.0% | |
| CAAAAGAGGAGAGTGGAGCA+AGG | - | chr3.4:63859236-63859255 | None:intergenic | 50.0% | |
| CAGCAGCAGCATTAGAGGAA+CGG | + | chr3.4:63860300-63860319 | MS.gene38408:CDS | 50.0% | |
| GCTGATAAGAGAGGAGAAGG+AGG | + | chr3.4:63860725-63860744 | MS.gene38408:CDS | 50.0% | |
| GGACCAAAAGATACGCTCTG+TGG | + | chr3.4:63860346-63860365 | MS.gene38408:CDS | 50.0% | |
| GGCAATTCTGGCAACCCTTT+GGG | + | chr3.4:63859038-63859057 | MS.gene38408:CDS | 50.0% | |
| GGCTAGAACTTGCAGGAGTA+TGG | + | chr3.4:63860486-63860505 | MS.gene38408:CDS | 50.0% | |
| GTCTCTTGCTGCGTCCTTAA+AGG | + | chr3.4:63857545-63857564 | MS.gene38408:CDS | 50.0% | |
| TAGGCTAATGGGAACAACGG+CGG | + | chr3.4:63859407-63859426 | MS.gene38408:CDS | 50.0% | |
| TCAAGCAGCAGCAGCATTAG+AGG | + | chr3.4:63860295-63860314 | MS.gene38408:CDS | 50.0% | |
| TGAGTGCAGAGCGAATTGAG+AGG | + | chr3.4:63857523-63857542 | MS.gene38408:CDS | 50.0% | |
| TGGAGTTAGGCAGGTTTCCA+TGG | - | chr3.4:63859064-63859083 | None:intergenic | 50.0% | |
| TGGCAATTCTGGCAACCCTT+TGG | + | chr3.4:63859037-63859056 | MS.gene38408:CDS | 50.0% | |
| ! | ATGCTTTTGGGCTGAGGTAG+AGG | + | chr3.4:63860760-63860779 | MS.gene38408:CDS | 50.0% |
| ! | CGTCCACAGAGCGTATCTTT+TGG | - | chr3.4:63860352-63860371 | None:intergenic | 50.0% |
| ! | GCATGCTGCTTGTAGGCTAA+TGG | + | chr3.4:63859395-63859414 | MS.gene38408:CDS | 50.0% |
| ! | GGAATCATGCTTTTGGGCTG+AGG | + | chr3.4:63860754-63860773 | MS.gene38408:CDS | 50.0% |
| ! | TCACAAGGCATGCTGCTTGT+AGG | + | chr3.4:63859388-63859407 | MS.gene38408:CDS | 50.0% |
| !! | TCTTGGAAAGCACCTGATGC+TGG | - | chr3.4:63857648-63857667 | None:intergenic | 50.0% |
| AAGAGGAGAGTGGAGCAAGG+AGG | - | chr3.4:63859233-63859252 | None:intergenic | 55.0% | |
| AGGGTTGCCAGAATTGCCAC+TGG | - | chr3.4:63859036-63859055 | None:intergenic | 55.0% | |
| GCAGGTTTCCATGGCCCAAA+GGG | - | chr3.4:63859055-63859074 | None:intergenic | 55.0% | |
| GTGAGCAGGCTAGAACTTGC+AGG | + | chr3.4:63860479-63860498 | MS.gene38408:CDS | 55.0% | |
| ! | GTGTTTGCAGGGCACTCATC+TGG | + | chr3.4:63859006-63859025 | MS.gene38408:CDS | 55.0% |
| ! | TGGTGGACCAGTGGCAATTC+TGG | + | chr3.4:63859026-63859045 | MS.gene38408:CDS | 55.0% |
| ! | TTTGCAGGGCACTCATCTGG+TGG | + | chr3.4:63859009-63859028 | MS.gene38408:CDS | 55.0% |
| GGCAGGTTTCCATGGCCCAA+AGG | - | chr3.4:63859056-63859075 | None:intergenic | 60.0% | |
| TCTGGCAACCCTTTGGGCCA+TGG | + | chr3.4:63859044-63859063 | MS.gene38408:CDS | 60.0% | |
| ! | GCACTCATCTGGTGGACCAG+TGG | + | chr3.4:63859017-63859036 | MS.gene38408:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 63857486 | 63860985 | 63857486 | ID=MS.gene38408 |
| chr3.4 | mRNA | 63857486 | 63860985 | 63857486 | ID=MS.gene38408.t1;Parent=MS.gene38408 |
| chr3.4 | exon | 63857486 | 63857758 | 63857486 | ID=MS.gene38408.t1.exon1;Parent=MS.gene38408.t1 |
| chr3.4 | CDS | 63857486 | 63857758 | 63857486 | ID=cds.MS.gene38408.t1;Parent=MS.gene38408.t1 |
| chr3.4 | exon | 63858973 | 63859779 | 63858973 | ID=MS.gene38408.t1.exon2;Parent=MS.gene38408.t1 |
| chr3.4 | CDS | 63858973 | 63859779 | 63858973 | ID=cds.MS.gene38408.t1;Parent=MS.gene38408.t1 |
| chr3.4 | exon | 63860272 | 63860985 | 63860272 | ID=MS.gene38408.t1.exon3;Parent=MS.gene38408.t1 |
| chr3.4 | CDS | 63860272 | 63860985 | 63860272 | ID=cds.MS.gene38408.t1;Parent=MS.gene38408.t1 |
| Gene Sequence |
| Protein sequence |
