Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56083.t1 | XP_013456816.1 | 98.2 | 657 | 9 | 2 | 1 | 657 | 1 | 654 | 0.00E+00 | 1177.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56083.t1 | Q9SXS2 | 75.7 | 622 | 150 | 1 | 17 | 637 | 1 | 622 | 9.1e-265 | 914.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56083.t1 | A0A072UMG1 | 98.2 | 657 | 9 | 2 | 1 | 657 | 1 | 654 | 0.0e+00 | 1177.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049396 | MS.gene56083 | 0.816748 | 4.71E-52 | -1.69E-46 |
| MS.gene050122 | MS.gene56083 | 0.813008 | 3.18E-51 | -1.69E-46 |
| MS.gene050499 | MS.gene56083 | 0.801694 | 7.98E-49 | -1.69E-46 |
| MS.gene050502 | MS.gene56083 | 0.854496 | 1.18E-61 | -1.69E-46 |
| MS.gene050868 | MS.gene56083 | 0.80691 | 6.54E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene56083 | 0.811113 | 8.24E-51 | -1.69E-46 |
| MS.gene051509 | MS.gene56083 | 0.849031 | 4.20E-60 | -1.69E-46 |
| MS.gene052164 | MS.gene56083 | 0.807586 | 4.70E-50 | -1.69E-46 |
| MS.gene052346 | MS.gene56083 | 0.814153 | 1.78E-51 | -1.69E-46 |
| MS.gene053318 | MS.gene56083 | 0.84438 | 7.84E-59 | -1.69E-46 |
| MS.gene053574 | MS.gene56083 | 0.824549 | 7.60E-54 | -1.69E-46 |
| MS.gene053626 | MS.gene56083 | 0.805657 | 1.20E-49 | -1.69E-46 |
| MS.gene05492 | MS.gene56083 | 0.801486 | 8.80E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene56083 | 0.837412 | 5.28E-57 | -1.69E-46 |
| MS.gene055911 | MS.gene56083 | 0.835796 | 1.36E-56 | -1.69E-46 |
| MS.gene05601 | MS.gene56083 | 0.806633 | 7.48E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene56083 | 0.840676 | 7.53E-58 | -1.69E-46 |
| MS.gene056346 | MS.gene56083 | 0.825327 | 4.98E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene56083 | 0.820888 | 5.41E-53 | -1.69E-46 |
| MS.gene056446 | MS.gene56083 | 0.803696 | 3.08E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene56083 | 0.800408 | 1.46E-48 | -1.69E-46 |
| MS.gene056878 | MS.gene56083 | 0.819032 | 1.44E-52 | -1.69E-46 |
| MS.gene057086 | MS.gene56083 | 0.80918 | 2.15E-50 | -1.69E-46 |
| MS.gene058166 | MS.gene56083 | 0.824794 | 6.65E-54 | -1.69E-46 |
| MS.gene058420 | MS.gene56083 | 0.854961 | 8.68E-62 | -1.69E-46 |
| MS.gene059367 | MS.gene56083 | 0.828785 | 7.41E-55 | -1.69E-46 |
| MS.gene059368 | MS.gene56083 | 0.831441 | 1.67E-55 | -1.69E-46 |
| MS.gene059517 | MS.gene56083 | 0.970725 | 4.69E-132 | -1.69E-46 |
| MS.gene059680 | MS.gene56083 | 0.844621 | 6.75E-59 | -1.69E-46 |
| MS.gene060372 | MS.gene56083 | 0.8213 | 4.34E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene56083 | 0.819287 | 1.26E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene56083 | 0.828991 | 6.61E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene56083 | 0.820987 | 5.13E-53 | -1.69E-46 |
| MS.gene06097 | MS.gene56083 | 0.819888 | 9.16E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56083 | MS.gene92478 | PPI |
| MS.gene56083 | MS.gene020274 | PPI |
| MS.gene56083 | MS.gene50542 | PPI |
| MS.gene56083 | MS.gene033981 | PPI |
| MS.gene56083 | MS.gene061401 | PPI |
| MS.gene75452 | MS.gene56083 | PPI |
| MS.gene054883 | MS.gene56083 | PPI |
| MS.gene56083 | MS.gene43089 | PPI |
| MS.gene56083 | MS.gene79239 | PPI |
| MS.gene56083 | MS.gene036194 | PPI |
| MS.gene56083 | MS.gene98424 | PPI |
| MS.gene56083 | MS.gene49382 | PPI |
| MS.gene56083 | MS.gene33361 | PPI |
| MS.gene56083 | MS.gene018135 | PPI |
| MS.gene56083 | MS.gene33360 | PPI |
| MS.gene56083 | MS.gene43394 | PPI |
| MS.gene56083 | MS.gene89102 | PPI |
| MS.gene052232 | MS.gene56083 | PPI |
| MS.gene56083 | MS.gene045087 | PPI |
| MS.gene56083 | MS.gene39949 | PPI |
| MS.gene56083 | MS.gene61200 | PPI |
| MS.gene56083 | MS.gene36287 | PPI |
| MS.gene56083 | MS.gene33359 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56083.t1 | MTR_4g084620 | 98.174 | 657 | 9 | 2 | 1 | 657 | 1 | 654 | 0.0 | 1305 |
| MS.gene56083.t1 | MTR_4g084640 | 75.809 | 649 | 153 | 3 | 1 | 647 | 1 | 647 | 0.0 | 1000 |
| MS.gene56083.t1 | MTR_2g102243 | 64.127 | 630 | 222 | 3 | 16 | 643 | 19 | 646 | 0.0 | 830 |
| MS.gene56083.t1 | MTR_4g011970 | 63.376 | 628 | 228 | 2 | 17 | 643 | 27 | 653 | 0.0 | 824 |
| MS.gene56083.t1 | MTR_2g102243 | 65.480 | 562 | 191 | 2 | 16 | 575 | 19 | 579 | 0.0 | 764 |
| MS.gene56083.t1 | MTR_1g071530 | 57.704 | 636 | 265 | 3 | 15 | 648 | 16 | 649 | 0.0 | 738 |
| MS.gene56083.t1 | MTR_7g095430 | 56.358 | 637 | 267 | 4 | 19 | 648 | 17 | 649 | 0.0 | 724 |
| MS.gene56083.t1 | MTR_5g061880 | 53.239 | 633 | 293 | 3 | 10 | 640 | 20 | 651 | 0.0 | 704 |
| MS.gene56083.t1 | MTR_3g073780 | 51.664 | 631 | 301 | 3 | 10 | 637 | 23 | 652 | 0.0 | 673 |
| MS.gene56083.t1 | MTR_7g095430 | 58.303 | 554 | 230 | 1 | 19 | 571 | 17 | 570 | 0.0 | 670 |
| MS.gene56083.t1 | MTR_2g008470 | 52.215 | 632 | 298 | 4 | 7 | 636 | 22 | 651 | 0.0 | 666 |
| MS.gene56083.t1 | MTR_2g008470 | 52.215 | 632 | 298 | 4 | 7 | 636 | 41 | 670 | 0.0 | 665 |
| MS.gene56083.t1 | MTR_3g073780 | 51.773 | 564 | 269 | 2 | 10 | 570 | 23 | 586 | 0.0 | 614 |
| MS.gene56083.t1 | MTR_6g086170 | 46.625 | 637 | 329 | 5 | 18 | 649 | 6 | 636 | 0.0 | 609 |
| MS.gene56083.t1 | MTR_3g073780 | 52.328 | 537 | 253 | 2 | 10 | 543 | 23 | 559 | 0.0 | 588 |
| MS.gene56083.t1 | MTR_5g061860 | 45.642 | 631 | 326 | 7 | 24 | 642 | 28 | 653 | 0.0 | 547 |
| MS.gene56083.t1 | MTR_3g087740 | 46.609 | 575 | 301 | 4 | 68 | 638 | 79 | 651 | 0.0 | 540 |
| MS.gene56083.t1 | MTR_3g073730 | 45.652 | 598 | 311 | 5 | 52 | 638 | 60 | 654 | 8.43e-179 | 523 |
| MS.gene56083.t1 | MTR_5g061860 | 45.652 | 552 | 280 | 6 | 8 | 543 | 7 | 554 | 2.43e-165 | 485 |
| MS.gene56083.t1 | MTR_3g087730 | 39.748 | 634 | 359 | 9 | 24 | 642 | 34 | 659 | 3.64e-153 | 457 |
| MS.gene56083.t1 | MTR_7g022870 | 35.443 | 553 | 344 | 8 | 65 | 613 | 71 | 614 | 2.49e-115 | 361 |
| MS.gene56083.t1 | MTR_7g022870 | 33.851 | 579 | 362 | 11 | 1 | 570 | 5 | 571 | 3.63e-107 | 336 |
| MS.gene56083.t1 | MTR_6g024420 | 29.545 | 132 | 67 | 4 | 222 | 353 | 61 | 166 | 1.69e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56083.t1 | AT1G23090 | 78.457 | 622 | 133 | 1 | 17 | 637 | 1 | 622 | 0.0 | 1004 |
| MS.gene56083.t1 | AT3G15990 | 66.930 | 632 | 199 | 4 | 17 | 643 | 24 | 650 | 0.0 | 849 |
| MS.gene56083.t1 | AT1G23090 | 78.367 | 490 | 105 | 1 | 149 | 637 | 1 | 490 | 0.0 | 785 |
| MS.gene56083.t1 | AT1G23090 | 78.367 | 490 | 105 | 1 | 149 | 637 | 1 | 490 | 0.0 | 785 |
| MS.gene56083.t1 | AT1G23090 | 78.367 | 490 | 105 | 1 | 149 | 637 | 1 | 490 | 0.0 | 785 |
| MS.gene56083.t1 | AT3G51895 | 56.583 | 638 | 272 | 3 | 20 | 655 | 20 | 654 | 0.0 | 740 |
| MS.gene56083.t1 | AT3G51895 | 56.583 | 638 | 272 | 3 | 20 | 655 | 65 | 699 | 0.0 | 740 |
| MS.gene56083.t1 | AT4G08620 | 51.987 | 629 | 297 | 4 | 20 | 645 | 23 | 649 | 0.0 | 656 |
| MS.gene56083.t1 | AT4G02700 | 53.526 | 624 | 279 | 5 | 18 | 635 | 8 | 626 | 0.0 | 648 |
| MS.gene56083.t1 | AT1G22150 | 51.510 | 629 | 298 | 4 | 19 | 643 | 30 | 655 | 0.0 | 646 |
| MS.gene56083.t1 | AT1G22150 | 51.510 | 629 | 298 | 4 | 19 | 643 | 30 | 655 | 0.0 | 646 |
| MS.gene56083.t1 | AT1G22150 | 51.510 | 629 | 298 | 4 | 19 | 643 | 30 | 655 | 0.0 | 646 |
| MS.gene56083.t1 | AT1G78000 | 51.196 | 627 | 301 | 4 | 20 | 643 | 28 | 652 | 0.0 | 634 |
| MS.gene56083.t1 | AT1G78000 | 51.196 | 627 | 301 | 4 | 20 | 643 | 28 | 652 | 0.0 | 634 |
| MS.gene56083.t1 | AT1G78000 | 51.196 | 627 | 301 | 4 | 20 | 643 | 28 | 652 | 0.0 | 634 |
| MS.gene56083.t1 | AT1G78000 | 52.668 | 581 | 271 | 3 | 20 | 597 | 28 | 607 | 0.0 | 612 |
| MS.gene56083.t1 | AT1G22150 | 52.878 | 556 | 256 | 3 | 19 | 570 | 30 | 583 | 0.0 | 598 |
| MS.gene56083.t1 | AT1G78000 | 53.430 | 554 | 254 | 3 | 20 | 570 | 28 | 580 | 0.0 | 590 |
| MS.gene56083.t1 | AT5G19600 | 47.107 | 605 | 308 | 5 | 33 | 635 | 28 | 622 | 0.0 | 585 |
| MS.gene56083.t1 | AT5G10180 | 47.164 | 617 | 314 | 7 | 25 | 633 | 57 | 669 | 0.0 | 547 |
| MS.gene56083.t1 | AT1G77990 | 46.791 | 592 | 301 | 6 | 65 | 648 | 90 | 675 | 0.0 | 547 |
| MS.gene56083.t1 | AT1G78000 | 54.741 | 464 | 209 | 1 | 20 | 482 | 28 | 491 | 2.15e-171 | 499 |
| MS.gene56083.t1 | AT1G78000 | 52.242 | 446 | 209 | 3 | 128 | 570 | 1 | 445 | 1.95e-155 | 456 |
| MS.gene56083.t1 | AT3G12520 | 36.738 | 558 | 324 | 10 | 68 | 613 | 51 | 591 | 1.96e-121 | 376 |
| MS.gene56083.t1 | AT3G12520 | 36.738 | 558 | 324 | 10 | 68 | 613 | 67 | 607 | 2.23e-121 | 376 |
| MS.gene56083.t1 | AT5G13550 | 34.146 | 615 | 381 | 11 | 45 | 651 | 57 | 655 | 5.56e-116 | 362 |
| MS.gene56083.t1 | AT3G12520 | 37.006 | 481 | 286 | 7 | 68 | 543 | 67 | 535 | 2.67e-108 | 338 |
Find 123 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAATCTGACCTTGTTTC+TGG | 0.130134 | 4.4:-28085935 | MS.gene56083:CDS |
| CCACTTATTTATGCTGTTCT+TGG | 0.200280 | 4.4:-28085629 | MS.gene56083:CDS |
| TTATCCAAAGCAATCTTAAT+TGG | 0.209529 | 4.4:-28085317 | MS.gene56083:CDS |
| TGAGGAAACCAAAGCTATTC+TGG | 0.221724 | 4.4:-28081768 | MS.gene56083:CDS |
| AATTAACCTCATGTATGTTT+TGG | 0.241761 | 4.4:+28085183 | None:intergenic |
| CTGCAACAGCAAGGCCTAAC+TGG | 0.284427 | 4.4:+28080651 | None:intergenic |
| TGGAATATGTTGAAATTTCA+TGG | 0.294784 | 4.4:-28081488 | MS.gene56083:CDS |
| CAACAACTTAAGAGCTTACT+TGG | 0.304881 | 4.4:-28085260 | MS.gene56083:CDS |
| AGCAATCTTAATTGGATTCA+TGG | 0.313090 | 4.4:-28085309 | MS.gene56083:CDS |
| CAAGGTCAGATTTAAAGATT+TGG | 0.314407 | 4.4:+28085942 | None:intergenic |
| AAGCTTCACTAGGAATTCTA+AGG | 0.315034 | 4.4:-28085460 | MS.gene56083:intron |
| GTGATGTTAACCGCTTTCTT+TGG | 0.327317 | 4.4:-28080692 | MS.gene56083:CDS |
| TCCCCGCTGCCTGCCACATT+TGG | 0.336834 | 4.4:-28080739 | MS.gene56083:CDS |
| GGAACAATGGCATAAGAAAA+AGG | 0.348636 | 4.4:+28080825 | None:intergenic |
| TTAGAACCCCATTGAAGAAT+AGG | 0.358996 | 4.4:+28085974 | None:intergenic |
| CTTCTTCCGTCTTGGTTGAC+TGG | 0.362920 | 4.4:+28079537 | None:intergenic |
| AAGGAATAAATCCTTCTTCA+TGG | 0.363775 | 4.4:-28081508 | MS.gene56083:CDS |
| GCAAATCTTCCTCCAATTGT+TGG | 0.366664 | 4.4:-28085754 | MS.gene56083:CDS |
| GAATGCATGGAGAAAGTATT+AGG | 0.372219 | 4.4:+28086172 | None:intergenic |
| AGGAAGGACATTTGCAGCTC+TGG | 0.374925 | 4.4:-28081241 | MS.gene56083:CDS |
| AATAAAGAAATGATGGCAAT+TGG | 0.378840 | 4.4:-28081198 | MS.gene56083:CDS |
| TAGAACCCCATTGAAGAATA+GGG | 0.379412 | 4.4:+28085975 | None:intergenic |
| GAATCCAATTAAGATTGCTT+TGG | 0.382130 | 4.4:+28085313 | None:intergenic |
| ACACATTACCTGACATTTCC+AGG | 0.383701 | 4.4:+28080148 | None:intergenic |
| ATAGAAATCTTCATCAATAC+AGG | 0.385942 | 4.4:-28080425 | MS.gene56083:CDS |
| TGGAAAACAGAACTCATAAC+AGG | 0.395270 | 4.4:+28085203 | None:intergenic |
| TGGAGGAAGATTTGCAAGCT+TGG | 0.399551 | 4.4:+28085762 | None:intergenic |
| CTTGGTCTAGTCGTGAAAAC+TGG | 0.401338 | 4.4:-28081458 | MS.gene56083:CDS |
| AGTGATGGGAATTTGCTTCT+TGG | 0.405363 | 4.4:-28084846 | MS.gene56083:CDS |
| ATTGCGCCCAATACAACATT+AGG | 0.408565 | 4.4:+28080794 | None:intergenic |
| TACACACCTAATGTTGTATT+GGG | 0.409395 | 4.4:-28080800 | MS.gene56083:CDS |
| ATACACACCTAATGTTGTAT+TGG | 0.411358 | 4.4:-28080801 | MS.gene56083:CDS |
| GAGGTGTTTGTCCTTTGAAT+TGG | 0.415965 | 4.4:+28086032 | None:intergenic |
| CTTGACAGTTGGAGAGGCTG+TGG | 0.416310 | 4.4:-28079585 | MS.gene56083:CDS |
| GCAGAGACCCAGAATAGCTT+TGG | 0.416415 | 4.4:+28081760 | None:intergenic |
| TTCAACATATTCCATGAAGA+AGG | 0.416613 | 4.4:+28081497 | None:intergenic |
| TAAAAGCAACAATGGAAAAG+AGG | 0.421997 | 4.4:-28079808 | MS.gene56083:CDS |
| TTCCAAATGTGGCAGGCAGC+GGG | 0.422579 | 4.4:+28080737 | None:intergenic |
| GCAATCAAGGCTCAAAATCA+TGG | 0.431453 | 4.4:-28081691 | MS.gene56083:CDS |
| AATTGGCGTAGAGGATCATC+AGG | 0.432967 | 4.4:+28086049 | None:intergenic |
| AAGCTATTCTGGGTCTCTGC+TGG | 0.437220 | 4.4:-28081757 | MS.gene56083:CDS |
| ATAAAGAAATGATGGCAATT+GGG | 0.445514 | 4.4:-28081197 | MS.gene56083:CDS |
| GCTAGTTGAAGAAACAGAAC+AGG | 0.445796 | 4.4:+28085515 | None:intergenic |
| AGAAGAGGAAGATAACATAA+AGG | 0.445883 | 4.4:-28080196 | MS.gene56083:CDS |
| CACTTACATAGTCCAACAAT+TGG | 0.446401 | 4.4:+28085742 | None:intergenic |
| GCATTCACATTGTGTACAAA+TGG | 0.446436 | 4.4:-28086149 | MS.gene56083:CDS |
| ACAAGTGAAGCAATAGAAAC+AGG | 0.450000 | 4.4:+28085581 | None:intergenic |
| GTGATGTTTGCAAAATTGAT+AGG | 0.450588 | 4.4:+28080357 | None:intergenic |
| ACTTCCTGCTATGTAACAAC+AGG | 0.458112 | 4.4:-28081150 | MS.gene56083:intron |
| GAGGAAACCAAAGCTATTCT+GGG | 0.459759 | 4.4:-28081767 | MS.gene56083:CDS |
| TGAGATTCCACTTGTGTCAA+TGG | 0.462450 | 4.4:+28079844 | None:intergenic |
| AAGGCCTAAAACAGTAATGA+TGG | 0.462741 | 4.4:-28080472 | MS.gene56083:CDS |
| ATCATAGTCACAGCAGTGAT+TGG | 0.463581 | 4.4:-28080773 | MS.gene56083:CDS |
| ATACAACATTAGGTGTGTAT+TGG | 0.467671 | 4.4:+28080804 | None:intergenic |
| ATCTTAATTGGATTCATGGC+TGG | 0.470414 | 4.4:-28085305 | MS.gene56083:CDS |
| TGTATGTGCTTCTTCCGTCT+TGG | 0.473979 | 4.4:+28079529 | None:intergenic |
| GTCTATCTTCCAAATGTGGC+AGG | 0.478726 | 4.4:+28080730 | None:intergenic |
| GAGATTATGACACACATAAG+AGG | 0.480206 | 4.4:+28081730 | None:intergenic |
| CTTCCAAATGTGGCAGGCAG+CGG | 0.488725 | 4.4:+28080736 | None:intergenic |
| CCTCTCCAACTGTCAAGAAA+AGG | 0.505332 | 4.4:+28079591 | None:intergenic |
| GGATACTCCTGCAAATTACA+AGG | 0.513068 | 4.4:-28080491 | MS.gene56083:CDS |
| GGATGGAAATAAAGAAATGA+TGG | 0.515894 | 4.4:-28081205 | MS.gene56083:CDS |
| AAAAGCAACAATGGAAAAGA+GGG | 0.517204 | 4.4:-28079807 | MS.gene56083:CDS |
| CAAGGAGTTAAAAGCAACAA+TGG | 0.517597 | 4.4:-28079816 | MS.gene56083:CDS |
| ATGCTCAAAATAAGAAAGCC+TGG | 0.523631 | 4.4:+28080387 | None:intergenic |
| TAGATTGGAAAATTGCATGA+AGG | 0.530054 | 4.4:-28081527 | MS.gene56083:CDS |
| AAATTTCATGGAAGTCACCT+TGG | 0.533094 | 4.4:-28081476 | MS.gene56083:CDS |
| AGGCCTAAAACAGTAATGAT+GGG | 0.534416 | 4.4:-28080471 | MS.gene56083:CDS |
| GGAAGGACATTTGCAGCTCT+GGG | 0.536167 | 4.4:-28081240 | MS.gene56083:CDS |
| TGTGAGGTGGTGGAACAACT+TGG | 0.540385 | 4.4:+28086119 | None:intergenic |
| GGTCTATTTCAAGCTTCACT+AGG | 0.546560 | 4.4:-28085470 | MS.gene56083:CDS |
| GTGAAAACTGGCATTATCAC+TGG | 0.547543 | 4.4:-28081446 | MS.gene56083:CDS |
| TGCTGTTCTTGGAAGCTCAA+GGG | 0.550006 | 4.4:-28085618 | MS.gene56083:CDS |
| AGAACCTGTTGTTACATAGC+AGG | 0.550167 | 4.4:+28081146 | None:intergenic |
| GTCATGGCAAACAATAGTGA+TGG | 0.551750 | 4.4:-28084861 | MS.gene56083:CDS |
| TTTCTATATATGTCTGTCCC+TGG | 0.552220 | 4.4:+28080441 | None:intergenic |
| CTGGGAAACTACAAAGTGGA+TGG | 0.553696 | 4.4:-28081222 | MS.gene56083:CDS |
| CCAAGAACAGCATAAATAAG+TGG | 0.556426 | 4.4:+28085629 | None:intergenic |
| TCAGCTGTTAATAACAATGC+AGG | 0.561538 | 4.4:-28080902 | MS.gene56083:CDS |
| AACAGAACAGGTTCTGCTGA+AGG | 0.564338 | 4.4:+28085527 | None:intergenic |
| ACATCACATATCTCAATGAC+AGG | 0.566479 | 4.4:-28080341 | MS.gene56083:intron |
| AAACAGGAAGGTATTGCAGT+AGG | 0.569633 | 4.4:-28081261 | MS.gene56083:intron |
| ATGCTGTTCTTGGAAGCTCA+AGG | 0.570962 | 4.4:-28085619 | MS.gene56083:CDS |
| GATCCTCTACGCCAATTCAA+AGG | 0.572296 | 4.4:-28086043 | MS.gene56083:CDS |
| ATTTGTCTATCTTCCAAATG+TGG | 0.574245 | 4.4:+28080726 | None:intergenic |
| TGCTAGCTTAGCCATCCCAC+AGG | 0.575905 | 4.4:-28085903 | MS.gene56083:intron |
| ATTGGGTGTATGAATGTGGT+TGG | 0.586439 | 4.4:-28081180 | MS.gene56083:CDS |
| TTACATAGTCCAACAATTGG+AGG | 0.587072 | 4.4:+28085745 | None:intergenic |
| GTAATGATGGGGAATATACC+AGG | 0.587250 | 4.4:-28080459 | MS.gene56083:CDS |
| TGTATTCTGACAGCTTGTGT+TGG | 0.588408 | 4.4:-28079687 | MS.gene56083:intron |
| ACAATGTGAATGCGAATGCA+TGG | 0.591645 | 4.4:+28086159 | None:intergenic |
| GTGAGCGCCATTGACACAAG+TGG | 0.593369 | 4.4:-28079851 | MS.gene56083:CDS |
| ATAAATGCATGCAGAGCATG+AGG | 0.596892 | 4.4:-28081786 | MS.gene56083:intron |
| AATGGAAAAGAGGGGTGTTG+AGG | 0.597093 | 4.4:-28079798 | MS.gene56083:intron |
| CTTGATATTAATCAGTAATG+TGG | 0.600180 | 4.4:+28079500 | None:intergenic |
| GGCAATTGGGTGTATGAATG+TGG | 0.608184 | 4.4:-28081184 | MS.gene56083:CDS |
| TCATGGCAAACAATAGTGAT+GGG | 0.609552 | 4.4:-28084860 | MS.gene56083:CDS |
| CAATAGTAAGACCAGAAACA+AGG | 0.611816 | 4.4:+28085924 | None:intergenic |
| TGTTACATAGCAGGAAGTGA+AGG | 0.613521 | 4.4:+28081155 | None:intergenic |
| TTAGGTGTGTATTGGAACAA+TGG | 0.616093 | 4.4:+28080812 | None:intergenic |
| AGGAAGGTATTGCAGTAGGA+AGG | 0.616887 | 4.4:-28081257 | MS.gene56083:CDS |
| ACGATGGATTGAAGAAGAAG+AGG | 0.617925 | 4.4:-28080211 | MS.gene56083:CDS |
| TGTCCTTTGAATTGGCGTAG+AGG | 0.623132 | 4.4:+28086040 | None:intergenic |
| AGGGAAGCTACAAGAATACC+AGG | 0.627065 | 4.4:-28080405 | MS.gene56083:CDS |
| GGCCTAAAACAGTAATGATG+GGG | 0.628045 | 4.4:-28080470 | MS.gene56083:CDS |
| GAGTGTCACCATCACTGTCA+CGG | 0.630556 | 4.4:+28080847 | None:intergenic |
| TATTGTGAAACTTACAGTGA+GGG | 0.630959 | 4.4:+28081415 | None:intergenic |
| AATTTGACAAACCTGTGGGA+TGG | 0.632176 | 4.4:+28085892 | None:intergenic |
| ATCATATTAGGACGCTACGA+TGG | 0.635788 | 4.4:-28080227 | MS.gene56083:intron |
| GAAGAGCCAGTCAACCAAGA+CGG | 0.642630 | 4.4:-28079543 | MS.gene56083:CDS |
| AGAAAGCGGTTAACATCACA+AGG | 0.644103 | 4.4:+28080696 | None:intergenic |
| ATGAACTCACTGCAACAGCA+AGG | 0.645871 | 4.4:+28080642 | None:intergenic |
| TAGAAATCTTCATCAATACA+GGG | 0.647002 | 4.4:-28080424 | MS.gene56083:CDS |
| AGGCAGCGGGGATATCAATG+AGG | 0.648129 | 4.4:+28080750 | None:intergenic |
| AGTAATGTCCGTGACAGTGA+TGG | 0.653422 | 4.4:-28080855 | MS.gene56083:CDS |
| AGCTCAAGGGATCTAGCAGT+AGG | 0.655950 | 4.4:-28085605 | MS.gene56083:CDS |
| AGAACAGCATAAATAAGTGG+AGG | 0.660588 | 4.4:+28085632 | None:intergenic |
| TCCAAATGTGGCAGGCAGCG+GGG | 0.664752 | 4.4:+28080738 | None:intergenic |
| GTTGGTGAATCCTCTTGCCG+AGG | 0.678987 | 4.4:-28079669 | MS.gene56083:CDS |
| AAAGCAACAATGGAAAAGAG+GGG | 0.696537 | 4.4:-28079806 | MS.gene56083:CDS |
| TAATGATGGGGAATATACCA+GGG | 0.716136 | 4.4:-28080458 | MS.gene56083:CDS |
| AGCTCTGGGAAACTACAAAG+TGG | 0.725432 | 4.4:-28081226 | MS.gene56083:CDS |
| ATTGGCGTAGAGGATCATCA+GGG | 0.743420 | 4.4:+28086050 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATATAATTATTAAA+TGG | - | chr4.4:28082397-28082416 | MS.gene56083:intron | 0.0% |
| !! | AAAAAAATGATTATATTAAG+AGG | - | chr4.4:28082314-28082333 | MS.gene56083:intron | 10.0% |
| !! | AAAAATAATGAATAAAATGA+AGG | + | chr4.4:28081964-28081983 | None:intergenic | 10.0% |
| !! | ATCAAAGAATAATATTATAT+AGG | + | chr4.4:28082576-28082595 | None:intergenic | 10.0% |
| !! | TCAAAGAATAATATTATATA+GGG | + | chr4.4:28082575-28082594 | None:intergenic | 10.0% |
| !!! | AATATTTTCTCATAATAAAA+AGG | + | chr4.4:28083299-28083318 | None:intergenic | 10.0% |
| !!! | ATAATATGCATTTTTTTTAT+GGG | - | chr4.4:28082425-28082444 | MS.gene56083:intron | 10.0% |
| !!! | ATTAAGAAAAAAATAGATTT+TGG | - | chr4.4:28082873-28082892 | MS.gene56083:intron | 10.0% |
| !!! | ATTCATTATTTTTTTTACAT+TGG | - | chr4.4:28081971-28081990 | MS.gene56083:intron | 10.0% |
| !!! | TAACTTTTTTTACTTAATAA+GGG | + | chr4.4:28083505-28083524 | None:intergenic | 10.0% |
| !!! | TATAATATGCATTTTTTTTA+TGG | - | chr4.4:28082424-28082443 | MS.gene56083:intron | 10.0% |
| !!! | TTAACTTTTTTTACTTAATA+AGG | + | chr4.4:28083506-28083525 | None:intergenic | 10.0% |
| !!! | TTTAAAAAAAGTTATGATTT+TGG | - | chr4.4:28082548-28082567 | MS.gene56083:intron | 10.0% |
| !! | AATATAATAAAAATTCGTCT+TGG | + | chr4.4:28082174-28082193 | None:intergenic | 15.0% |
| !! | AATATATAAAATGGTGATAA+AGG | - | chr4.4:28081047-28081066 | MS.gene56083:intron | 15.0% |
| !! | AATTGATGGAATAAAAAAAT+CGG | - | chr4.4:28083255-28083274 | MS.gene56083:intron | 15.0% |
| !! | AGAAATAATAATTAATCTCA+TGG | + | chr4.4:28084124-28084143 | None:intergenic | 15.0% |
| !! | ATTAGTACTAATTAATTAAG+AGG | + | chr4.4:28079828-28079847 | None:intergenic | 15.0% |
| !! | GAATGTACATTTATTATTAT+GGG | - | chr4.4:28082447-28082466 | MS.gene56083:intron | 15.0% |
| !! | TCCATTGAAAAAATATTATA+TGG | + | chr4.4:28082349-28082368 | None:intergenic | 15.0% |
| !! | TTAAAAAAAAAAAAACAGGA+AGG | - | chr4.4:28084416-28084435 | MS.gene56083:intron | 15.0% |
| !! | TTATAAGTAAATGTTATGAT+AGG | - | chr4.4:28081414-28081433 | MS.gene56083:intron | 15.0% |
| !!! | AAATGATTTTTTTAGCAAAA+TGG | - | chr4.4:28082933-28082952 | MS.gene56083:intron | 15.0% |
| !!! | AACAATTTTTTTTAGTTTAG+AGG | - | chr4.4:28081703-28081722 | MS.gene56083:CDS | 15.0% |
| !!! | AATTATGTAACTTGTTTATT+AGG | - | chr4.4:28079892-28079911 | MS.gene56083:intron | 15.0% |
| !!! | ACAATTTTTTTTAGTTTAGA+GGG | - | chr4.4:28081704-28081723 | MS.gene56083:CDS | 15.0% |
| !!! | ACCATATAATATTTTTTCAA+TGG | - | chr4.4:28082345-28082364 | MS.gene56083:intron | 15.0% |
| !!! | ATGTTTTTGAAAGTTTTTAT+TGG | - | chr4.4:28082373-28082392 | MS.gene56083:intron | 15.0% |
| !!! | ATTATGTAACTTGTTTATTA+GGG | - | chr4.4:28079893-28079912 | MS.gene56083:intron | 15.0% |
| !!! | TAGGTAAAAAAAAATCATTT+TGG | - | chr4.4:28082677-28082696 | MS.gene56083:intron | 15.0% |
| !!! | TTTATCACCATTTTATATAT+TGG | + | chr4.4:28081048-28081067 | None:intergenic | 15.0% |
| !!! | TTTGAAGTTTTTTTTTTTGA+AGG | - | chr4.4:28082192-28082211 | MS.gene56083:intron | 15.0% |
| !! | AAAAAAAATCCAAAACAAAC+AGG | - | chr4.4:28083031-28083050 | MS.gene56083:intron | 20.0% |
| !! | AAAATATATCAGATACCTAT+TGG | + | chr4.4:28083757-28083776 | None:intergenic | 20.0% |
| !! | AAATATATCAGATACCTATT+GGG | + | chr4.4:28083756-28083775 | None:intergenic | 20.0% |
| !! | CAAATAAATATGATGTAAGA+GGG | + | chr4.4:28085806-28085825 | None:intergenic | 20.0% |
| !! | CATTATCAAAACACAAAAAA+AGG | + | chr4.4:28083197-28083216 | None:intergenic | 20.0% |
| !! | CTAAGATTTCAAAAAGAAAA+TGG | + | chr4.4:28083406-28083425 | None:intergenic | 20.0% |
| !! | CTTTAATCAATAAGACTATT+AGG | + | chr4.4:28083374-28083393 | None:intergenic | 20.0% |
| !! | GGAATGTACATTTATTATTA+TGG | - | chr4.4:28082446-28082465 | MS.gene56083:intron | 20.0% |
| !! | TAAGTAATTTATCGAATTGA+TGG | - | chr4.4:28083241-28083260 | MS.gene56083:intron | 20.0% |
| !! | TCAAATAAATATGATGTAAG+AGG | + | chr4.4:28085807-28085826 | None:intergenic | 20.0% |
| !! | TCATTTAAACTATGAATTTC+AGG | - | chr4.4:28084751-28084770 | MS.gene56083:intron | 20.0% |
| !! | TGAAATTCATAGTTTAAATG+AGG | + | chr4.4:28084752-28084771 | None:intergenic | 20.0% |
| !! | TGAATAAGTTAAGTTCAAAA+GGG | + | chr4.4:28079873-28079892 | None:intergenic | 20.0% |
| !! | TTGAATAAGTTAAGTTCAAA+AGG | + | chr4.4:28079874-28079893 | None:intergenic | 20.0% |
| !!! | AATTTTAAGATGCAAATCTT+TGG | + | chr4.4:28083655-28083674 | None:intergenic | 20.0% |
| !!! | ACATACAATCGTTTTTTTTA+AGG | - | chr4.4:28083101-28083120 | MS.gene56083:intron | 20.0% |
| !!! | ATACCTTTTTTAGAACATAT+GGG | + | chr4.4:28080293-28080312 | None:intergenic | 20.0% |
| !!! | CATTTTCTTTTTGAAATCTT+AGG | - | chr4.4:28083404-28083423 | MS.gene56083:intron | 20.0% |
| !!! | CCTAACTTTAAATTTTTGTA+AGG | + | chr4.4:28079602-28079621 | None:intergenic | 20.0% |
| !!! | CCTTACAAAAATTTAAAGTT+AGG | - | chr4.4:28079599-28079618 | MS.gene56083:CDS | 20.0% |
| !!! | CTAATAGTCTTATTGATTAA+AGG | - | chr4.4:28083372-28083391 | MS.gene56083:intron | 20.0% |
| !!! | CTTTTTTTGTGTTTTGATAA+TGG | - | chr4.4:28083195-28083214 | MS.gene56083:intron | 20.0% |
| !!! | GAACTTATGAATTTTAAGTT+TGG | + | chr4.4:28083702-28083721 | None:intergenic | 20.0% |
| !!! | GATTTAAGACATATCTATTA+AGG | + | chr4.4:28085962-28085981 | None:intergenic | 20.0% |
| !!! | GTAAAAAAAAATCATTTTGG+AGG | - | chr4.4:28082680-28082699 | MS.gene56083:intron | 20.0% |
| !!! | TAGTATTGACATATCATATT+AGG | - | chr4.4:28085450-28085469 | MS.gene56083:intron | 20.0% |
| !!! | TATACCTTTTTTAGAACATA+TGG | + | chr4.4:28080294-28080313 | None:intergenic | 20.0% |
| !!! | TCTATTTTTTTCTTAATGCA+AGG | + | chr4.4:28082870-28082889 | None:intergenic | 20.0% |
| !!! | TGAAATAGATTTTCATTTTG+AGG | - | chr4.4:28082906-28082925 | MS.gene56083:intron | 20.0% |
| !!! | TGTGATTCTTTTTTCTTTTT+TGG | + | chr4.4:28083151-28083170 | None:intergenic | 20.0% |
| !!! | TGTTATTTATTAATGATTGC+AGG | - | chr4.4:28080328-28080347 | MS.gene56083:intron | 20.0% |
| !!! | TTACATTGGTCAAATTTTTA+AGG | - | chr4.4:28081985-28082004 | MS.gene56083:intron | 20.0% |
| ! | AAAAGAATCACATGCATTAT+TGG | - | chr4.4:28083159-28083178 | MS.gene56083:intron | 25.0% |
| ! | AAAATAGAGAAAGAAACACT+TGG | + | chr4.4:28081210-28081229 | None:intergenic | 25.0% |
| ! | AAATAGAGAAAGAAACACTT+GGG | + | chr4.4:28081209-28081228 | None:intergenic | 25.0% |
| ! | AAGTAAAAAAAGTTAACACG+AGG | - | chr4.4:28083510-28083529 | MS.gene56083:intron | 25.0% |
| ! | AATAAAGAAATGATGGCAAT+TGG | - | chr4.4:28084491-28084510 | MS.gene56083:intron | 25.0% |
| ! | ATAAAGAAATGATGGCAATT+GGG | - | chr4.4:28084492-28084511 | MS.gene56083:intron | 25.0% |
| ! | ATAGAAATCTTCATCAATAC+AGG | - | chr4.4:28085264-28085283 | MS.gene56083:CDS | 25.0% |
| ! | CAACTTTATGTCTAAGAAAT+TGG | + | chr4.4:28083613-28083632 | None:intergenic | 25.0% |
| ! | GACAATGCATAATATATACA+AGG | - | chr4.4:28080644-28080663 | MS.gene56083:intron | 25.0% |
| ! | GTTTGTCACATAAATTCAAA+AGG | - | chr4.4:28084567-28084586 | MS.gene56083:intron | 25.0% |
| ! | TAGAAATCTTCATCAATACA+GGG | - | chr4.4:28085265-28085284 | MS.gene56083:CDS | 25.0% |
| ! | TATATATACAACAACTTCTC+TGG | - | chr4.4:28083832-28083851 | MS.gene56083:intron | 25.0% |
| ! | TGCACAAATAATAAAACACA+TGG | - | chr4.4:28081084-28081103 | MS.gene56083:intron | 25.0% |
| ! | TGGAATATGTTGAAATTTCA+TGG | - | chr4.4:28084201-28084220 | MS.gene56083:intron | 25.0% |
| ! | TGGGAAAAGAATAAAATCAT+AGG | + | chr4.4:28081190-28081209 | None:intergenic | 25.0% |
| ! | TTATCCAAAGCAATCTTAAT+TGG | - | chr4.4:28080372-28080391 | MS.gene56083:CDS | 25.0% |
| ! | TTATGTAGTAAAAGTCGAAA+CGG | + | chr4.4:28081360-28081379 | None:intergenic | 25.0% |
| !! | AATTAACCTCATGTATGTTT+TGG | + | chr4.4:28080509-28080528 | None:intergenic | 25.0% |
| !! | AGATACGTTTTGCAAATTTT+GGG | - | chr4.4:28083570-28083589 | MS.gene56083:intron | 25.0% |
| !! | ATTTTCCCTCTCATTATTTT+TGG | - | chr4.4:28084299-28084318 | MS.gene56083:intron | 25.0% |
| !! | ATTTTCTTTCTACAATCTCA+TGG | - | chr4.4:28080971-28080990 | MS.gene56083:intron | 25.0% |
| !! | TGATAAAGGTATATAGTTTC+AGG | - | chr4.4:28081061-28081080 | MS.gene56083:intron | 25.0% |
| !! | TTAATTACTCGAGAGATTTT+GGG | + | chr4.4:28083057-28083076 | None:intergenic | 25.0% |
| !! | TTATTATTATGGGTGAGTTT+TGG | - | chr4.4:28082457-28082476 | MS.gene56083:intron | 25.0% |
| !! | TTTAATTACTCGAGAGATTT+TGG | + | chr4.4:28083058-28083077 | None:intergenic | 25.0% |
| !!! | ATTTTTTCCCTATTCTTCAA+TGG | - | chr4.4:28079707-28079726 | MS.gene56083:intron | 25.0% |
| !!! | GGTTTTATAAATGGCAAAAA+TGG | - | chr4.4:28084377-28084396 | MS.gene56083:intron | 25.0% |
| !!! | TATTGATTTTAGCATGCAAT+TGG | + | chr4.4:28083729-28083748 | None:intergenic | 25.0% |
| !!! | TATTTTTGATACAGCAAATG+TGG | - | chr4.4:28085563-28085582 | MS.gene56083:CDS | 25.0% |
| !!! | TGCATAGTAGGTTTTATAAA+TGG | - | chr4.4:28084368-28084387 | MS.gene56083:intron | 25.0% |
| !!! | TGTTTTTACACATCATACAA+AGG | + | chr4.4:28081579-28081598 | None:intergenic | 25.0% |
| !!! | TTTCCCATATGTTCTAAAAA+AGG | - | chr4.4:28080287-28080306 | MS.gene56083:intron | 25.0% |
| !!! | TTTCTTTTTGAAATCTTAGG+TGG | - | chr4.4:28083407-28083426 | MS.gene56083:intron | 25.0% |
| !!! | TTTTTTCCCTATTCTTCAAT+GGG | - | chr4.4:28079708-28079727 | MS.gene56083:intron | 25.0% |
| AAAAGCAACAATGGAAAAGA+GGG | - | chr4.4:28085882-28085901 | MS.gene56083:intron | 30.0% | |
| AAAATCAATACACACCCAAT+AGG | - | chr4.4:28083739-28083758 | MS.gene56083:intron | 30.0% | |
| AAACACAAAAAAAGGTCATG+TGG | + | chr4.4:28083189-28083208 | None:intergenic | 30.0% | |
| AAGGAATAAATCCTTCTTCA+TGG | - | chr4.4:28084181-28084200 | MS.gene56083:intron | 30.0% | |
| AATAAGCTCAAAACATCCAT+AGG | + | chr4.4:28085726-28085745 | None:intergenic | 30.0% | |
| ACCTACCATTAAATAGATCT+AGG | + | chr4.4:28082662-28082681 | None:intergenic | 30.0% | |
| ACTAACTAGTTAAGTAACAG+AGG | + | chr4.4:28085434-28085453 | None:intergenic | 30.0% | |
| AGAAGAGGAAGATAACATAA+AGG | - | chr4.4:28085493-28085512 | MS.gene56083:CDS | 30.0% | |
| AGCAATCTTAATTGGATTCA+TGG | - | chr4.4:28080380-28080399 | MS.gene56083:CDS | 30.0% | |
| ATAAGTTAAGTTCAAAAGGG+TGG | + | chr4.4:28079870-28079889 | None:intergenic | 30.0% | |
| ATACAACATTAGGTGTGTAT+TGG | + | chr4.4:28084888-28084907 | None:intergenic | 30.0% | |
| ATACACACCTAATGTTGTAT+TGG | - | chr4.4:28084888-28084907 | MS.gene56083:intron | 30.0% | |
| ATAGAATTTGACAAACCTGT+GGG | + | chr4.4:28079804-28079823 | None:intergenic | 30.0% | |
| ATATTGTGAAACTTACAGTG+AGG | + | chr4.4:28084278-28084297 | None:intergenic | 30.0% | |
| ATTTGTCTATCTTCCAAATG+TGG | + | chr4.4:28084966-28084985 | None:intergenic | 30.0% | |
| CAAGGTCAGATTTAAAGATT+TGG | + | chr4.4:28079750-28079769 | None:intergenic | 30.0% | |
| CACAAAATATGATGTTCACA+AGG | + | chr4.4:28085091-28085110 | None:intergenic | 30.0% | |
| CCTACCATTAAATAGATCTA+GGG | + | chr4.4:28082661-28082680 | None:intergenic | 30.0% | |
| CGATTTGTATAGCATGAATA+CGG | + | chr4.4:28081288-28081307 | None:intergenic | 30.0% | |
| GAAAGGGCCAATATATAAAA+TGG | - | chr4.4:28081038-28081057 | MS.gene56083:intron | 30.0% | |
| GAAGTTATACTCTAGATTCA+AGG | - | chr4.4:28082225-28082244 | MS.gene56083:intron | 30.0% | |
| GAATAAAATCATAGGACAAG+CGG | + | chr4.4:28081182-28081201 | None:intergenic | 30.0% | |
| GAATCCAATTAAGATTGCTT+TGG | + | chr4.4:28080379-28080398 | None:intergenic | 30.0% | |
| GATCAACTCTATGTTACAAA+TGG | + | chr4.4:28080731-28080750 | None:intergenic | 30.0% | |
| GATTTGTATAGCATGAATAC+GGG | + | chr4.4:28081287-28081306 | None:intergenic | 30.0% | |
| GGATGGAAATAAAGAAATGA+TGG | - | chr4.4:28084484-28084503 | MS.gene56083:intron | 30.0% | |
| GTGATGTTTGCAAAATTGAT+AGG | + | chr4.4:28085335-28085354 | None:intergenic | 30.0% | |
| GTTGTATATATATGTGTGCA+AGG | + | chr4.4:28083824-28083843 | None:intergenic | 30.0% | |
| TAAAAGCAACAATGGAAAAG+AGG | - | chr4.4:28085881-28085900 | MS.gene56083:intron | 30.0% | |
| TACACACCTAATGTTGTATT+GGG | - | chr4.4:28084889-28084908 | MS.gene56083:intron | 30.0% | |
| TAGATTGGAAAATTGCATGA+AGG | - | chr4.4:28084162-28084181 | MS.gene56083:intron | 30.0% | |
| TATTGTGAAACTTACAGTGA+GGG | + | chr4.4:28084277-28084296 | None:intergenic | 30.0% | |
| TATTTGTGTTTAGTGTAGCA+TGG | + | chr4.4:28080592-28080611 | None:intergenic | 30.0% | |
| TTCAACATATTCCATGAAGA+AGG | + | chr4.4:28084195-28084214 | None:intergenic | 30.0% | |
| TTGAAATAGACCAGCAAAAA+AGG | + | chr4.4:28080211-28080230 | None:intergenic | 30.0% | |
| TTGAGAAGCAAATAATGAGT+TGG | + | chr4.4:28084054-28084073 | None:intergenic | 30.0% | |
| TTTATTAATGATTGCAGGCT+AGG | - | chr4.4:28080333-28080352 | MS.gene56083:intron | 30.0% | |
| ! | AAGCATACCCTTTAAGAAAT+AGG | - | chr4.4:28081016-28081035 | MS.gene56083:intron | 30.0% |
| ! | ACCCTTTAAGAAATAGGAAA+GGG | - | chr4.4:28081022-28081041 | MS.gene56083:intron | 30.0% |
| ! | AGGTTGGATTATCAACTTTT+AGG | - | chr4.4:28085177-28085196 | MS.gene56083:intron | 30.0% |
| ! | CAGATACGTTTTGCAAATTT+TGG | - | chr4.4:28083569-28083588 | MS.gene56083:intron | 30.0% |
| ! | TACCCTTTAAGAAATAGGAA+AGG | - | chr4.4:28081021-28081040 | MS.gene56083:intron | 30.0% |
| ! | TGTTTTCCAAAACATACATG+AGG | - | chr4.4:28080500-28080519 | MS.gene56083:CDS | 30.0% |
| ! | TTCATGCAATTTTCCAATCT+AGG | + | chr4.4:28084163-28084182 | None:intergenic | 30.0% |
| ! | TTTAAATCTGACCTTGTTTC+TGG | - | chr4.4:28079754-28079773 | MS.gene56083:intron | 30.0% |
| ! | TTTTTCCCTATTCTTCAATG+GGG | - | chr4.4:28079709-28079728 | MS.gene56083:intron | 30.0% |
| !! | ATTATTTCTGTCTTCTGATG+TGG | - | chr4.4:28084135-28084154 | MS.gene56083:intron | 30.0% |
| !! | GTGAGTTTTGGTATTTGTTT+TGG | - | chr4.4:28082469-28082488 | MS.gene56083:intron | 30.0% |
| !! | TCTATTGCTTCACTTGTTTT+AGG | - | chr4.4:28080114-28080133 | MS.gene56083:intron | 30.0% |
| !! | TGACCGTTTTTAAGAACTAT+GGG | - | chr4.4:28081869-28081888 | MS.gene56083:intron | 30.0% |
| !! | TTGACCGTTTTTAAGAACTA+TGG | - | chr4.4:28081868-28081887 | MS.gene56083:intron | 30.0% |
| !!! | GTATTTGTGTTTTTTTTCCG+AGG | + | chr4.4:28080683-28080702 | None:intergenic | 30.0% |
| !!! | TTATGTGTTTTTTTGTGCAG+TGG | - | chr4.4:28080806-28080825 | MS.gene56083:CDS | 30.0% |
| AAAAACGACTCCAAAGAAAG+CGG | + | chr4.4:28085010-28085029 | None:intergenic | 35.0% | |
| AAAGCAACAATGGAAAAGAG+GGG | - | chr4.4:28085883-28085902 | MS.gene56083:intron | 35.0% | |
| AAATTTCATGGAAGTCACCT+TGG | - | chr4.4:28084213-28084232 | MS.gene56083:intron | 35.0% | |
| AAGCTTCACTAGGAATTCTA+AGG | - | chr4.4:28080229-28080248 | MS.gene56083:intron | 35.0% | |
| AAGGCCTAAAACAGTAATGA+TGG | - | chr4.4:28085217-28085236 | MS.gene56083:CDS | 35.0% | |
| ACAAGTGAAGCAATAGAAAC+AGG | + | chr4.4:28080111-28080130 | None:intergenic | 35.0% | |
| ACATCACATATCTCAATGAC+AGG | - | chr4.4:28085348-28085367 | MS.gene56083:intron | 35.0% | |
| AGAACAGCATAAATAAGTGG+AGG | + | chr4.4:28080060-28080079 | None:intergenic | 35.0% | |
| AGACTAGTGTATTTGACTCA+TGG | - | chr4.4:28084707-28084726 | MS.gene56083:intron | 35.0% | |
| AGATGACAATGCTATTGATC+AGG | - | chr4.4:28085157-28085176 | MS.gene56083:intron | 35.0% | |
| AGCATGGCACATATGTATAA+GGG | + | chr4.4:28080576-28080595 | None:intergenic | 35.0% | |
| AGGCCTAAAACAGTAATGAT+GGG | - | chr4.4:28085218-28085237 | MS.gene56083:CDS | 35.0% | |
| AGTAAAAGTCGAAACGGAAA+TGG | + | chr4.4:28081354-28081373 | None:intergenic | 35.0% | |
| ATAGATCTAGGGACCAAAAT+CGG | + | chr4.4:28082650-28082669 | None:intergenic | 35.0% | |
| ATAGTAGCTAGAATTTCACC+CGG | - | chr4.4:28083464-28083483 | MS.gene56083:intron | 35.0% | |
| ATATCAGTCAAAAACGAGGT+TGG | - | chr4.4:28081805-28081824 | MS.gene56083:intron | 35.0% | |
| ATCTTAATTGGATTCATGGC+TGG | - | chr4.4:28080384-28080403 | MS.gene56083:CDS | 35.0% | |
| ATGCTCAAAATAAGAAAGCC+TGG | + | chr4.4:28085305-28085324 | None:intergenic | 35.0% | |
| ATTATGAATGTGTCAGTGTG+TGG | + | chr4.4:28080707-28080726 | None:intergenic | 35.0% | |
| CAACAACTTAAGAGCTTACT+TGG | - | chr4.4:28080429-28080448 | MS.gene56083:CDS | 35.0% | |
| CAAGGAGTTAAAAGCAACAA+TGG | - | chr4.4:28085873-28085892 | MS.gene56083:intron | 35.0% | |
| CAATAGTAAGACCAGAAACA+AGG | + | chr4.4:28079768-28079787 | None:intergenic | 35.0% | |
| CACTTACATAGTCCAACAAT+TGG | + | chr4.4:28079950-28079969 | None:intergenic | 35.0% | |
| CAGCCCATAGTTCTTAAAAA+CGG | + | chr4.4:28081875-28081894 | None:intergenic | 35.0% | |
| CATAGAATTTGACAAACCTG+TGG | + | chr4.4:28079805-28079824 | None:intergenic | 35.0% | |
| CCAAGAACAGCATAAATAAG+TGG | + | chr4.4:28080063-28080082 | None:intergenic | 35.0% | |
| CCACTTATTTATGCTGTTCT+TGG | - | chr4.4:28080060-28080079 | MS.gene56083:intron | 35.0% | |
| CCCTAGATCTATTTAATGGT+AGG | - | chr4.4:28082658-28082677 | MS.gene56083:intron | 35.0% | |
| CGCTTCCAAAAATAATGAGA+GGG | + | chr4.4:28084307-28084326 | None:intergenic | 35.0% | |
| CGTTAATTGCTCTGTCAAAA+TGG | - | chr4.4:28081844-28081863 | MS.gene56083:intron | 35.0% | |
| GAGATTATGACACACATAAG+AGG | + | chr4.4:28083962-28083981 | None:intergenic | 35.0% | |
| GAGTATATCAGTCAAAAACG+AGG | - | chr4.4:28081801-28081820 | MS.gene56083:intron | 35.0% | |
| GATATTTATGCGTGCATAGT+AGG | - | chr4.4:28084356-28084375 | MS.gene56083:intron | 35.0% | |
| GCATTCACATTGTGTACAAA+TGG | - | chr4.4:28079540-28079559 | MS.gene56083:CDS | 35.0% | |
| GGAACAATGGCATAAGAAAA+AGG | + | chr4.4:28084867-28084886 | None:intergenic | 35.0% | |
| GTCATCTCTTGTCAATCAAA+AGG | + | chr4.4:28085144-28085163 | None:intergenic | 35.0% | |
| TAGAACCCCATTGAAGAATA+GGG | + | chr4.4:28079717-28079736 | None:intergenic | 35.0% | |
| TAGCATGGCACATATGTATA+AGG | + | chr4.4:28080577-28080596 | None:intergenic | 35.0% | |
| TCAGCTGTTAATAACAATGC+AGG | - | chr4.4:28084787-28084806 | MS.gene56083:intron | 35.0% | |
| TCATGGCAAACAATAGTGAT+GGG | - | chr4.4:28080829-28080848 | MS.gene56083:CDS | 35.0% | |
| TGGAAAACAGAACTCATAAC+AGG | + | chr4.4:28080489-28080508 | None:intergenic | 35.0% | |
| TGGTCCCTAGATCTATTTAA+TGG | - | chr4.4:28082654-28082673 | MS.gene56083:intron | 35.0% | |
| TGTGTCTTGCAAATGTCATA+AGG | + | chr4.4:28083221-28083240 | None:intergenic | 35.0% | |
| TTACATAGTCCAACAATTGG+AGG | + | chr4.4:28079947-28079966 | None:intergenic | 35.0% | |
| TTAGAACCCCATTGAAGAAT+AGG | + | chr4.4:28079718-28079737 | None:intergenic | 35.0% | |
| TTAGGTGTGTATTGGAACAA+TGG | + | chr4.4:28084880-28084899 | None:intergenic | 35.0% | |
| TTTCTATATATGTCTGTCCC+TGG | + | chr4.4:28085251-28085270 | None:intergenic | 35.0% | |
| ! | ACTCTTCTAAGTGTTATTGC+TGG | - | chr4.4:28085690-28085709 | MS.gene56083:intron | 35.0% |
| ! | CACATGAGAGTATGTTTAGA+GGG | - | chr4.4:28081749-28081768 | MS.gene56083:CDS | 35.0% |
| ! | GCCCTTTCCTATTTCTTAAA+GGG | + | chr4.4:28081026-28081045 | None:intergenic | 35.0% |
| ! | GTTTTTATCTCAGTCCAGTT+AGG | - | chr4.4:28085024-28085043 | MS.gene56083:intron | 35.0% |
| ! | TAATGATGGGGAATATACCA+GGG | - | chr4.4:28085231-28085250 | MS.gene56083:CDS | 35.0% |
| ! | TCACATGAGAGTATGTTTAG+AGG | - | chr4.4:28081748-28081767 | MS.gene56083:CDS | 35.0% |
| ! | TCTAAGTGTTATTGCTGGAA+TGG | - | chr4.4:28085695-28085714 | MS.gene56083:intron | 35.0% |
| ! | TCTTCTGTGTTTTGCAATCA+AGG | - | chr4.4:28083985-28084004 | MS.gene56083:intron | 35.0% |
| ! | TGAATTTAGCTCAGTTGGTA+AGG | - | chr4.4:28080622-28080641 | MS.gene56083:intron | 35.0% |
| ! | TTCCCCATCATTACTGTTTT+AGG | + | chr4.4:28085224-28085243 | None:intergenic | 35.0% |
| ! | TTTCAGCTTTTCTATGACCT+CGG | + | chr4.4:28086040-28086059 | None:intergenic | 35.0% |
| !! | AAGTGGAATCTCACTTTTCA+AGG | - | chr4.4:28085855-28085874 | MS.gene56083:intron | 35.0% |
| !! | CCTCAAAAAAGACTAGTCTT+AGG | - | chr4.4:28079676-28079695 | MS.gene56083:CDS | 35.0% |
| !! | GAATGCATGGAGAAAGTATT+AGG | + | chr4.4:28079520-28079539 | None:intergenic | 35.0% |
| !! | GTCAAATACACTAGTCTTCT+CGG | + | chr4.4:28084704-28084723 | None:intergenic | 35.0% |
| !! | TTTTAGGCCTTGTAATTTGC+AGG | + | chr4.4:28085208-28085227 | None:intergenic | 35.0% |
| !! | TTTTGTAAGGTGCTTTTGTG+AGG | + | chr4.4:28079589-28079608 | None:intergenic | 35.0% |
| !!! | AAAGCTAAAATCGCCGATTT+TGG | - | chr4.4:28082634-28082653 | MS.gene56083:intron | 35.0% |
| !!! | CCTAAGACTAGTCTTTTTTG+AGG | + | chr4.4:28079679-28079698 | None:intergenic | 35.0% |
| !!! | CTTACTTCAACCTTTTTTGC+TGG | - | chr4.4:28080198-28080217 | MS.gene56083:CDS | 35.0% |
| AAGGTTCAGAGTTCAAACCT+CGG | - | chr4.4:28080663-28080682 | MS.gene56083:CDS | 40.0% | |
| AATTTGACAAACCTGTGGGA+TGG | + | chr4.4:28079800-28079819 | None:intergenic | 40.0% | |
| ACAATGTGAATGCGAATGCA+TGG | + | chr4.4:28079533-28079552 | None:intergenic | 40.0% | |
| ACACATTACCTGACATTTCC+AGG | + | chr4.4:28085544-28085563 | None:intergenic | 40.0% | |
| ACTTCCTGCTATGTAACAAC+AGG | - | chr4.4:28084539-28084558 | MS.gene56083:intron | 40.0% | |
| AGAAAGCGGTTAACATCACA+AGG | + | chr4.4:28084996-28085015 | None:intergenic | 40.0% | |
| AGAACCTGTTGTTACATAGC+AGG | + | chr4.4:28084546-28084565 | None:intergenic | 40.0% | |
| ATAAATGCATGCAGAGCATG+AGG | - | chr4.4:28083903-28083922 | MS.gene56083:intron | 40.0% | |
| ATCATAGTCACAGCAGTGAT+TGG | - | chr4.4:28084916-28084935 | MS.gene56083:intron | 40.0% | |
| ATCATATTAGGACGCTACGA+TGG | - | chr4.4:28085462-28085481 | MS.gene56083:CDS | 40.0% | |
| ATTGCGCCCAATACAACATT+AGG | + | chr4.4:28084898-28084917 | None:intergenic | 40.0% | |
| ATTGGGTGTATGAATGTGGT+TGG | - | chr4.4:28084509-28084528 | MS.gene56083:intron | 40.0% | |
| CTGGTTCAAGTCAAGTTTCA+AGG | - | chr4.4:28081892-28081911 | MS.gene56083:intron | 40.0% | |
| GACAATGCTATTGATCAGGT+TGG | - | chr4.4:28085161-28085180 | MS.gene56083:intron | 40.0% | |
| GAGGAAACCAAAGCTATTCT+GGG | - | chr4.4:28083922-28083941 | MS.gene56083:intron | 40.0% | |
| GCAAATCTTCCTCCAATTGT+TGG | - | chr4.4:28079935-28079954 | MS.gene56083:intron | 40.0% | |
| GCAATCAAGGCTCAAAATCA+TGG | - | chr4.4:28083998-28084017 | MS.gene56083:intron | 40.0% | |
| GCGCTTCCAAAAATAATGAG+AGG | + | chr4.4:28084308-28084327 | None:intergenic | 40.0% | |
| GCTAGTTGAAGAAACAGAAC+AGG | + | chr4.4:28080177-28080196 | None:intergenic | 40.0% | |
| GGATACTCCTGCAAATTACA+AGG | - | chr4.4:28085198-28085217 | MS.gene56083:CDS | 40.0% | |
| GGCCTAAAACAGTAATGATG+GGG | - | chr4.4:28085219-28085238 | MS.gene56083:CDS | 40.0% | |
| GGTCTATTTCAAGCTTCACT+AGG | - | chr4.4:28080219-28080238 | MS.gene56083:CDS | 40.0% | |
| GTATGCTTACACGCAGAAAA+TGG | + | chr4.4:28081004-28081023 | None:intergenic | 40.0% | |
| GTCATGGCAAACAATAGTGA+TGG | - | chr4.4:28080828-28080847 | MS.gene56083:CDS | 40.0% | |
| GTGAAAACTGGCATTATCAC+TGG | - | chr4.4:28084243-28084262 | MS.gene56083:intron | 40.0% | |
| GTGATGTTAACCGCTTTCTT+TGG | - | chr4.4:28084997-28085016 | MS.gene56083:intron | 40.0% | |
| GTTCAAGTCAAGTTTCAAGG+TGG | - | chr4.4:28081895-28081914 | MS.gene56083:intron | 40.0% | |
| TACACGCAGAAAATGGACAA+GGG | + | chr4.4:28080997-28081016 | None:intergenic | 40.0% | |
| TGAGATTCCACTTGTGTCAA+TGG | + | chr4.4:28085848-28085867 | None:intergenic | 40.0% | |
| TGAGGAAACCAAAGCTATTC+TGG | - | chr4.4:28083921-28083940 | MS.gene56083:intron | 40.0% | |
| TGTATTCTGACAGCTTGTGT+TGG | - | chr4.4:28086002-28086021 | MS.gene56083:CDS | 40.0% | |
| TGTTACATAGCAGGAAGTGA+AGG | + | chr4.4:28084537-28084556 | None:intergenic | 40.0% | |
| TTACACGCAGAAAATGGACA+AGG | + | chr4.4:28080998-28081017 | None:intergenic | 40.0% | |
| TTCTGATGTGGTTCCTAGAT+TGG | - | chr4.4:28084147-28084166 | MS.gene56083:intron | 40.0% | |
| TTTCCAGGACCAAAAATCGA+AGG | + | chr4.4:28085529-28085548 | None:intergenic | 40.0% | |
| ! | AAGTGTTATTGCTGGAATGG+TGG | - | chr4.4:28085698-28085717 | MS.gene56083:intron | 40.0% |
| ! | ACACTCAAGCCTTCGATTTT+TGG | - | chr4.4:28085517-28085536 | MS.gene56083:CDS | 40.0% |
| ! | AGTGATGGGAATTTGCTTCT+TGG | - | chr4.4:28080843-28080862 | MS.gene56083:CDS | 40.0% |
| ! | GACAACCTTTTCTTGACAGT+TGG | - | chr4.4:28086093-28086112 | MS.gene56083:CDS | 40.0% |
| ! | GAGGTGTTTGTCCTTTGAAT+TGG | + | chr4.4:28079660-28079679 | None:intergenic | 40.0% |
| ! | GATTTTGGGCCTGTTTGTTT+TGG | + | chr4.4:28083043-28083062 | None:intergenic | 40.0% |
| ! | GGCCCTTTCCTATTTCTTAA+AGG | + | chr4.4:28081027-28081046 | None:intergenic | 40.0% |
| ! | GTAATGATGGGGAATATACC+AGG | - | chr4.4:28085230-28085249 | MS.gene56083:CDS | 40.0% |
| ! | TCTCGTGAATTTAGCTCAGT+TGG | - | chr4.4:28080617-28080636 | MS.gene56083:intron | 40.0% |
| !! | AAAACGAGGTTGGCTTGATT+TGG | - | chr4.4:28081815-28081834 | MS.gene56083:intron | 40.0% |
| !! | AAACAGGAAGGTATTGCAGT+AGG | - | chr4.4:28084428-28084447 | MS.gene56083:intron | 40.0% |
| !! | ACGATGGATTGAAGAAGAAG+AGG | - | chr4.4:28085478-28085497 | MS.gene56083:CDS | 40.0% |
| !! | CGTTTTTAAGAACTATGGGC+TGG | - | chr4.4:28081873-28081892 | MS.gene56083:intron | 40.0% |
| !! | TCATTTTGGAGGTCAGACAA+AGG | - | chr4.4:28082691-28082710 | MS.gene56083:intron | 40.0% |
| !! | TTTTTGGTCCTGGAAATGTC+AGG | - | chr4.4:28085533-28085552 | MS.gene56083:CDS | 40.0% |
| !!! | GTTTTTTTGTGCAGTGGTCA+TGG | - | chr4.4:28080812-28080831 | MS.gene56083:CDS | 40.0% |
| AACAGAACAGGTTCTGCTGA+AGG | + | chr4.4:28080165-28080184 | None:intergenic | 45.0% | |
| AATTGGCGTAGAGGATCATC+AGG | + | chr4.4:28079643-28079662 | None:intergenic | 45.0% | |
| AGGGAAGCTACAAGAATACC+AGG | - | chr4.4:28085284-28085303 | MS.gene56083:CDS | 45.0% | |
| AGGGATTGAAGTTCGAACTC+CGG | + | chr4.4:28083486-28083505 | None:intergenic | 45.0% | |
| AGTAATGTCCGTGACAGTGA+TGG | - | chr4.4:28084834-28084853 | MS.gene56083:CDS | 45.0% | |
| ATGAACTCACTGCAACAGCA+AGG | + | chr4.4:28085050-28085069 | None:intergenic | 45.0% | |
| ATGCTGTTCTTGGAAGCTCA+AGG | - | chr4.4:28080070-28080089 | MS.gene56083:intron | 45.0% | |
| ATTGGCGTAGAGGATCATCA+GGG | + | chr4.4:28079642-28079661 | None:intergenic | 45.0% | |
| CCTCTCCAACTGTCAAGAAA+AGG | + | chr4.4:28086101-28086120 | None:intergenic | 45.0% | |
| CTGGGAAACTACAAAGTGGA+TGG | - | chr4.4:28084467-28084486 | MS.gene56083:intron | 45.0% | |
| CTTGGTCTAGTCGTGAAAAC+TGG | - | chr4.4:28084231-28084250 | MS.gene56083:intron | 45.0% | |
| GACACAGTTTGATCAACCCT+GGG | - | chr4.4:28081129-28081148 | MS.gene56083:intron | 45.0% | |
| GATCCTCTACGCCAATTCAA+AGG | - | chr4.4:28079646-28079665 | MS.gene56083:CDS | 45.0% | |
| GGCAATTGGGTGTATGAATG+TGG | - | chr4.4:28084505-28084524 | MS.gene56083:intron | 45.0% | |
| GTATAGCATGAATACGGGCA+TGG | + | chr4.4:28081282-28081301 | None:intergenic | 45.0% | |
| GTCTATCTTCCAAATGTGGC+AGG | + | chr4.4:28084962-28084981 | None:intergenic | 45.0% | |
| TGACACAGTTTGATCAACCC+TGG | - | chr4.4:28081128-28081147 | MS.gene56083:intron | 45.0% | |
| TGCTGTTCTTGGAAGCTCAA+GGG | - | chr4.4:28080071-28080090 | MS.gene56083:intron | 45.0% | |
| TGGAGGAAGATTTGCAAGCT+TGG | + | chr4.4:28079930-28079949 | None:intergenic | 45.0% | |
| TGTATGTGCTTCTTCCGTCT+TGG | + | chr4.4:28086163-28086182 | None:intergenic | 45.0% | |
| TGTCCTTTGAATTGGCGTAG+AGG | + | chr4.4:28079652-28079671 | None:intergenic | 45.0% | |
| ! | AGGACAAGCGGTTTGAGTTT+GGG | + | chr4.4:28081170-28081189 | None:intergenic | 45.0% |
| ! | CAGTTTTCACGACTAGACCA+AGG | + | chr4.4:28084233-28084252 | None:intergenic | 45.0% |
| ! | CCTTTTCTTGACAGTTGGAG+AGG | - | chr4.4:28086098-28086117 | MS.gene56083:CDS | 45.0% |
| ! | TAGGACAAGCGGTTTGAGTT+TGG | + | chr4.4:28081171-28081190 | None:intergenic | 45.0% |
| ! | TTTTCTATGACCTCGGCAAG+AGG | + | chr4.4:28086033-28086052 | None:intergenic | 45.0% |
| !! | AATGGAAAAGAGGGGTGTTG+AGG | - | chr4.4:28085891-28085910 | MS.gene56083:intron | 45.0% |
| !! | AGCTCTGGGAAACTACAAAG+TGG | - | chr4.4:28084463-28084482 | MS.gene56083:intron | 45.0% |
| !! | AGGAAGGTATTGCAGTAGGA+AGG | - | chr4.4:28084432-28084451 | MS.gene56083:intron | 45.0% |
| !! | TGTAAGGTGCTTTTGTGAGG+TGG | + | chr4.4:28079586-28079605 | None:intergenic | 45.0% |
| !!! | AAGCCTTCGATTTTTGGTCC+TGG | - | chr4.4:28085523-28085542 | MS.gene56083:CDS | 45.0% |
| !! | TTAAAAATAAAAAAAAAGAT+AGG | + | chr4.4:28082265-28082284 | None:intergenic | 5.0% |
| !! | TTTATTAAAAAAAAAAAAAC+AGG | - | chr4.4:28084412-28084431 | MS.gene56083:intron | 5.0% |
| !!! | ATAACTTTTTATTATTATTT+TGG | - | chr4.4:28081551-28081570 | MS.gene56083:intron | 5.0% |
| !!! | CTTTTTTTTTATTTTTAAAA+AGG | - | chr4.4:28082267-28082286 | MS.gene56083:intron | 5.0% |
| AAGCTATTCTGGGTCTCTGC+TGG | - | chr4.4:28083932-28083951 | MS.gene56083:intron | 50.0% | |
| AGCTCAAGGGATCTAGCAGT+AGG | - | chr4.4:28080084-28080103 | MS.gene56083:intron | 50.0% | |
| AGGAAGGACATTTGCAGCTC+TGG | - | chr4.4:28084448-28084467 | MS.gene56083:intron | 50.0% | |
| CTTCTCTGGCACAGAGTACA+TGG | - | chr4.4:28083846-28083865 | MS.gene56083:intron | 50.0% | |
| CTTCTTCCGTCTTGGTTGAC+TGG | + | chr4.4:28086155-28086174 | None:intergenic | 50.0% | |
| GAAGAGCCAGTCAACCAAGA+CGG | - | chr4.4:28086146-28086165 | MS.gene56083:CDS | 50.0% | |
| GAGTGTCACCATCACTGTCA+CGG | + | chr4.4:28084845-28084864 | None:intergenic | 50.0% | |
| GCAGAGACCCAGAATAGCTT+TGG | + | chr4.4:28083932-28083951 | None:intergenic | 50.0% | |
| GGAAGGACATTTGCAGCTCT+GGG | - | chr4.4:28084449-28084468 | MS.gene56083:intron | 50.0% | |
| GGGATTGAAGTTCGAACTCC+GGG | + | chr4.4:28083485-28083504 | None:intergenic | 50.0% | |
| GTCACTGTCTATGTCGTGTC+TGG | - | chr4.4:28081253-28081272 | MS.gene56083:CDS | 50.0% | |
| GTCAGTGAATGAACGTCCCA+GGG | + | chr4.4:28081148-28081167 | None:intergenic | 50.0% | |
| ! | TGTGTCAGTGTGTAGCTCTG+AGG | + | chr4.4:28081115-28081134 | None:intergenic | 50.0% |
| !! | AAAAGAGGGGTGTTGAGGCA+AGG | - | chr4.4:28085896-28085915 | MS.gene56083:intron | 50.0% |
| !! | AAGGTGCTTTTGTGAGGTGG+TGG | + | chr4.4:28079583-28079602 | None:intergenic | 50.0% |
| !! | TGTGAGGTGGTGGAACAACT+TGG | + | chr4.4:28079573-28079592 | None:intergenic | 50.0% |
| AGGCAGCGGGGATATCAATG+AGG | + | chr4.4:28084942-28084961 | None:intergenic | 55.0% | |
| CTGCAACAGCAAGGCCTAAC+TGG | + | chr4.4:28085041-28085060 | None:intergenic | 55.0% | |
| CTTCCAAATGTGGCAGGCAG+CGG | + | chr4.4:28084956-28084975 | None:intergenic | 55.0% | |
| CTTGACAGTTGGAGAGGCTG+TGG | - | chr4.4:28086104-28086123 | MS.gene56083:CDS | 55.0% | |
| GGTCAGTGAATGAACGTCCC+AGG | + | chr4.4:28081149-28081168 | None:intergenic | 55.0% | |
| GTGAGCGCCATTGACACAAG+TGG | - | chr4.4:28085838-28085857 | MS.gene56083:intron | 55.0% | |
| TGCTGGAATGGTGGCACCTA+TGG | - | chr4.4:28085707-28085726 | MS.gene56083:intron | 55.0% | |
| TTCCAAATGTGGCAGGCAGC+GGG | + | chr4.4:28084955-28084974 | None:intergenic | 55.0% | |
| ! | GTTGGTGAATCCTCTTGCCG+AGG | - | chr4.4:28086020-28086039 | MS.gene56083:CDS | 55.0% |
| ! | TGAGTTGGAGACGAGAGCAG+TGG | + | chr4.4:28084039-28084058 | None:intergenic | 55.0% |
| ! | TGCTAGCTTAGCCATCCCAC+AGG | - | chr4.4:28079786-28079805 | MS.gene56083:intron | 55.0% |
| TCCAAATGTGGCAGGCAGCG+GGG | + | chr4.4:28084954-28084973 | None:intergenic | 60.0% | |
| TCCCCGCTGCCTGCCACATT+TGG | - | chr4.4:28084950-28084969 | MS.gene56083:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 28079511 | 28086200 | 28079511 | ID=MS.gene56083 |
| chr4.4 | mRNA | 28079511 | 28086200 | 28079511 | ID=MS.gene56083.t1;Parent=MS.gene56083 |
| chr4.4 | exon | 28085904 | 28086200 | 28085904 | ID=MS.gene56083.t1.exon1;Parent=MS.gene56083.t1 |
| chr4.4 | CDS | 28085904 | 28086200 | 28085904 | ID=cds.MS.gene56083.t1;Parent=MS.gene56083.t1 |
| chr4.4 | exon | 28085749 | 28085797 | 28085749 | ID=MS.gene56083.t1.exon2;Parent=MS.gene56083.t1 |
| chr4.4 | CDS | 28085749 | 28085797 | 28085749 | ID=cds.MS.gene56083.t1;Parent=MS.gene56083.t1 |
| chr4.4 | exon | 28085461 | 28085668 | 28085461 | ID=MS.gene56083.t1.exon3;Parent=MS.gene56083.t1 |
| chr4.4 | CDS | 28085461 | 28085668 | 28085461 | ID=cds.MS.gene56083.t1;Parent=MS.gene56083.t1 |
| chr4.4 | exon | 28085190 | 28085361 | 28085190 | ID=MS.gene56083.t1.exon4;Parent=MS.gene56083.t1 |
| chr4.4 | CDS | 28085190 | 28085361 | 28085190 | ID=cds.MS.gene56083.t1;Parent=MS.gene56083.t1 |
| chr4.4 | exon | 28084820 | 28084885 | 28084820 | ID=MS.gene56083.t1.exon5;Parent=MS.gene56083.t1 |
| chr4.4 | CDS | 28084820 | 28084885 | 28084820 | ID=cds.MS.gene56083.t1;Parent=MS.gene56083.t1 |
| chr4.4 | exon | 28081681 | 28081794 | 28081681 | ID=MS.gene56083.t1.exon6;Parent=MS.gene56083.t1 |
| chr4.4 | CDS | 28081681 | 28081794 | 28081681 | ID=cds.MS.gene56083.t1;Parent=MS.gene56083.t1 |
| chr4.4 | exon | 28081430 | 28081546 | 28081430 | ID=MS.gene56083.t1.exon7;Parent=MS.gene56083.t1 |
| chr4.4 | CDS | 28081430 | 28081546 | 28081430 | ID=cds.MS.gene56083.t1;Parent=MS.gene56083.t1 |
| chr4.4 | exon | 28081151 | 28081277 | 28081151 | ID=MS.gene56083.t1.exon8;Parent=MS.gene56083.t1 |
| chr4.4 | CDS | 28081151 | 28081277 | 28081151 | ID=cds.MS.gene56083.t1;Parent=MS.gene56083.t1 |
| chr4.4 | exon | 28080652 | 28080938 | 28080652 | ID=MS.gene56083.t1.exon9;Parent=MS.gene56083.t1 |
| chr4.4 | CDS | 28080652 | 28080938 | 28080652 | ID=cds.MS.gene56083.t1;Parent=MS.gene56083.t1 |
| chr4.4 | exon | 28080342 | 28080532 | 28080342 | ID=MS.gene56083.t1.exon10;Parent=MS.gene56083.t1 |
| chr4.4 | CDS | 28080342 | 28080532 | 28080342 | ID=cds.MS.gene56083.t1;Parent=MS.gene56083.t1 |
| chr4.4 | exon | 28080157 | 28080239 | 28080157 | ID=MS.gene56083.t1.exon11;Parent=MS.gene56083.t1 |
| chr4.4 | CDS | 28080157 | 28080239 | 28080157 | ID=cds.MS.gene56083.t1;Parent=MS.gene56083.t1 |
| chr4.4 | exon | 28079799 | 28079875 | 28079799 | ID=MS.gene56083.t1.exon12;Parent=MS.gene56083.t1 |
| chr4.4 | CDS | 28079799 | 28079875 | 28079799 | ID=cds.MS.gene56083.t1;Parent=MS.gene56083.t1 |
| chr4.4 | exon | 28079511 | 28079696 | 28079511 | ID=MS.gene56083.t1.exon13;Parent=MS.gene56083.t1 |
| chr4.4 | CDS | 28079511 | 28079696 | 28079511 | ID=cds.MS.gene56083.t1;Parent=MS.gene56083.t1 |
| Gene Sequence |
| Protein sequence |
