Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41079.t1 | XP_013467854.1 | 98.1 | 213 | 4 | 0 | 1 | 213 | 1 | 213 | 3.10E-112 | 414.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41079.t1 | Q8GW29 | 83.6 | 214 | 33 | 1 | 1 | 212 | 1 | 214 | 3.7e-98 | 359.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41079.t1 | A0A072VJY2 | 98.1 | 213 | 4 | 0 | 1 | 213 | 1 | 213 | 2.2e-112 | 414.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055648 | MS.gene41079 | 0.902428 | 9.80E-79 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050128 | MS.gene41079 | PPI |
| MS.gene007426 | MS.gene41079 | PPI |
| MS.gene52386 | MS.gene41079 | PPI |
| MS.gene33028 | MS.gene41079 | PPI |
| MS.gene007521 | MS.gene41079 | PPI |
| MS.gene41079 | MS.gene016180 | PPI |
| MS.gene08753 | MS.gene41079 | PPI |
| MS.gene08691 | MS.gene41079 | PPI |
| MS.gene41079 | MS.gene028695 | PPI |
| MS.gene41079 | MS.gene20068 | PPI |
| MS.gene24610 | MS.gene41079 | PPI |
| MS.gene051577 | MS.gene41079 | PPI |
| MS.gene22428 | MS.gene41079 | PPI |
| MS.gene007681 | MS.gene41079 | PPI |
| MS.gene31266 | MS.gene41079 | PPI |
| MS.gene029824 | MS.gene41079 | PPI |
| MS.gene016181 | MS.gene41079 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41079.t1 | MTR_1g057020 | 98.122 | 213 | 4 | 0 | 1 | 213 | 1 | 213 | 1.34e-153 | 424 |
| MS.gene41079.t1 | MTR_2g094790 | 75.385 | 195 | 48 | 0 | 6 | 200 | 10 | 204 | 2.19e-113 | 322 |
| MS.gene41079.t1 | MTR_7g101290 | 72.727 | 209 | 55 | 1 | 6 | 212 | 11 | 219 | 6.07e-113 | 322 |
| MS.gene41079.t1 | MTR_0041s0100 | 72.727 | 209 | 55 | 1 | 6 | 212 | 11 | 219 | 6.07e-113 | 322 |
| MS.gene41079.t1 | MTR_1g064260 | 71.770 | 209 | 57 | 1 | 6 | 212 | 10 | 218 | 5.02e-112 | 319 |
| MS.gene41079.t1 | MTR_3g113710 | 76.020 | 196 | 47 | 0 | 5 | 200 | 11 | 206 | 5.99e-111 | 317 |
| MS.gene41079.t1 | MTR_4g058740 | 75.648 | 193 | 47 | 0 | 8 | 200 | 12 | 204 | 3.42e-110 | 314 |
| MS.gene41079.t1 | MTR_3g113710 | 78.571 | 182 | 39 | 0 | 5 | 186 | 11 | 192 | 1.54e-106 | 306 |
| MS.gene41079.t1 | MTR_1g015830 | 62.911 | 213 | 78 | 1 | 1 | 212 | 1 | 213 | 6.60e-99 | 286 |
| MS.gene41079.t1 | MTR_1g064260 | 72.222 | 162 | 43 | 1 | 53 | 212 | 1 | 162 | 1.10e-83 | 246 |
| MS.gene41079.t1 | MTR_3g113710 | 77.863 | 131 | 29 | 0 | 70 | 200 | 10 | 140 | 9.62e-71 | 213 |
| MS.gene41079.t1 | MTR_1g015830 | 62.112 | 161 | 60 | 1 | 53 | 212 | 1 | 161 | 5.24e-70 | 211 |
| MS.gene41079.t1 | MTR_1g024145 | 71.845 | 103 | 29 | 0 | 24 | 126 | 150 | 252 | 3.84e-48 | 158 |
| MS.gene41079.t1 | MTR_1g024850 | 67.143 | 70 | 23 | 0 | 6 | 75 | 14 | 83 | 9.04e-32 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41079.t1 | AT5G06300 | 83.645 | 214 | 33 | 1 | 1 | 212 | 1 | 214 | 5.03e-131 | 367 |
| MS.gene41079.t1 | AT2G35990 | 75.980 | 204 | 49 | 0 | 1 | 204 | 1 | 204 | 1.85e-118 | 335 |
| MS.gene41079.t1 | AT2G37210 | 75.122 | 205 | 50 | 1 | 5 | 208 | 10 | 214 | 1.91e-115 | 328 |
| MS.gene41079.t1 | AT3G53450 | 75.122 | 205 | 50 | 1 | 5 | 208 | 10 | 214 | 1.60e-114 | 325 |
| MS.gene41079.t1 | AT2G28305 | 71.090 | 211 | 60 | 1 | 3 | 212 | 2 | 212 | 9.10e-113 | 321 |
| MS.gene41079.t1 | AT2G37210 | 66.812 | 229 | 51 | 2 | 5 | 208 | 10 | 238 | 2.13e-109 | 313 |
| MS.gene41079.t1 | AT2G28305 | 77.473 | 182 | 41 | 0 | 3 | 184 | 2 | 183 | 5.92e-107 | 306 |
| MS.gene41079.t1 | AT5G03270 | 72.487 | 189 | 52 | 0 | 2 | 190 | 12 | 200 | 4.33e-103 | 296 |
| MS.gene41079.t1 | AT4G35190 | 69.000 | 200 | 62 | 0 | 1 | 200 | 1 | 200 | 9.78e-102 | 294 |
| MS.gene41079.t1 | AT5G03270 | 73.224 | 183 | 49 | 0 | 2 | 184 | 12 | 194 | 3.67e-100 | 288 |
| MS.gene41079.t1 | AT4G35190 | 72.283 | 184 | 51 | 0 | 1 | 184 | 1 | 184 | 3.35e-98 | 284 |
| MS.gene41079.t1 | AT5G11950 | 59.524 | 210 | 84 | 1 | 2 | 210 | 3 | 212 | 2.65e-92 | 269 |
| MS.gene41079.t1 | AT5G11950 | 59.524 | 210 | 84 | 1 | 2 | 210 | 3 | 212 | 2.65e-92 | 269 |
| MS.gene41079.t1 | AT5G11950 | 59.524 | 210 | 84 | 1 | 2 | 210 | 3 | 212 | 2.65e-92 | 269 |
| MS.gene41079.t1 | AT2G35990 | 75.658 | 152 | 37 | 0 | 53 | 204 | 1 | 152 | 1.00e-84 | 248 |
| MS.gene41079.t1 | AT2G35990 | 75.658 | 152 | 37 | 0 | 53 | 204 | 1 | 152 | 1.00e-84 | 248 |
| MS.gene41079.t1 | AT2G28305 | 76.087 | 138 | 33 | 0 | 3 | 140 | 2 | 139 | 1.37e-78 | 233 |
| MS.gene41079.t1 | AT5G11950 | 60.377 | 159 | 62 | 1 | 53 | 210 | 1 | 159 | 3.22e-66 | 201 |
| MS.gene41079.t1 | AT5G26140 | 49.650 | 143 | 50 | 1 | 80 | 200 | 6 | 148 | 9.86e-40 | 134 |
| MS.gene41079.t1 | AT5G26140 | 48.062 | 129 | 45 | 1 | 94 | 200 | 1 | 129 | 1.37e-32 | 115 |
| MS.gene41079.t1 | AT5G26140 | 51.020 | 98 | 48 | 0 | 103 | 200 | 17 | 114 | 4.03e-28 | 103 |
Find 75 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGGATTGATTTGGTTTA+TGG | 0.101186 | 1.3:+42518175 | MS.gene41079:CDS |
| TTTGAAACATTAGGTGGATA+TGG | 0.215130 | 1.3:+42519769 | MS.gene41079:intron |
| GTCTACTGTGGTAGCAGTTC+AGG | 0.251931 | 1.3:+42517236 | MS.gene41079:CDS |
| CTAGTTCAACAGCAGCTTCT+TGG | 0.259502 | 1.3:-42517274 | None:intergenic |
| GATGGCGGACGCCATGTTCT+TGG | 0.292130 | 1.3:+42518244 | MS.gene41079:CDS |
| AATCCTCTTAAACTTTGATT+TGG | 0.295009 | 1.3:-42517210 | None:intergenic |
| AGATAACTGGTGACCCTATT+GGG | 0.297013 | 1.3:+42519311 | MS.gene41079:intron |
| GATGCATTCATTGCCCTTCC+TGG | 0.321895 | 1.3:+42519391 | MS.gene41079:CDS |
| ACGATAATGCGACGTGCCTT+TGG | 0.334696 | 1.3:-42521249 | None:intergenic |
| GGAATTGGTTAGGGGATTAG+AGG | 0.346976 | 1.3:+42521290 | MS.gene41079:CDS |
| CAGATAACTGGTGACCCTAT+TGG | 0.351597 | 1.3:+42519310 | MS.gene41079:intron |
| TCACATGGCAACTTCTGATT+CGG | 0.371578 | 1.3:-42521579 | None:intergenic |
| AAACCAAATCAAAGTTTAAG+AGG | 0.371717 | 1.3:+42517207 | MS.gene41079:CDS |
| CGATAATGCGACGTGCCTTT+GGG | 0.375378 | 1.3:-42521248 | None:intergenic |
| TGGAACCCTTGAAGAATTGC+TGG | 0.377448 | 1.3:+42519789 | MS.gene41079:CDS |
| ACTCAATGGTTTACCTCTCT+TGG | 0.379537 | 1.3:-42519179 | None:intergenic |
| GGTTGAGAGAAGGATTGATT+TGG | 0.380510 | 1.3:+42518168 | MS.gene41079:intron |
| ACAGCTCTCACTTCCCCAAT+AGG | 0.386608 | 1.3:-42519325 | None:intergenic |
| AATTGCTGGAAATTATTACT+TGG | 0.394745 | 1.3:+42519803 | MS.gene41079:CDS |
| AGGTGGTAGTGTGGGTCTGA+TGG | 0.405577 | 1.3:+42518198 | MS.gene41079:CDS |
| ATGGCGGACGCCATGTTCTT+GGG | 0.414120 | 1.3:+42518245 | MS.gene41079:CDS |
| GGTGGTAGTGTGGGTCTGAT+GGG | 0.415803 | 1.3:+42518199 | MS.gene41079:CDS |
| GTTTATGGAGGTGGTAGTGT+GGG | 0.418025 | 1.3:+42518190 | MS.gene41079:CDS |
| CCACAGCCAAGGAATTGGTT+AGG | 0.425578 | 1.3:+42521280 | MS.gene41079:CDS |
| GCATCAAAGGAAAGCTGAAA+TGG | 0.425795 | 1.3:+42519357 | MS.gene41079:CDS |
| ACAGCAGCTTCTTGGTAAGT+AGG | 0.426650 | 1.3:-42517266 | None:intergenic |
| CACATGGCAACTTCTGATTC+GGG | 0.432879 | 1.3:-42521578 | None:intergenic |
| ATTGATTTGGTTTATGGAGG+TGG | 0.437781 | 1.3:+42518181 | MS.gene41079:CDS |
| AGCATCCACAGCCAAGGAAT+TGG | 0.439181 | 1.3:+42521275 | MS.gene41079:CDS |
| CACAGCCAAGGAATTGGTTA+GGG | 0.451858 | 1.3:+42521281 | MS.gene41079:CDS |
| TCTCTTGGCATGAGACTCCT+AGG | 0.453788 | 1.3:-42519164 | None:intergenic |
| ATTATTACTTGGGCTCAACT+TGG | 0.456278 | 1.3:+42519814 | MS.gene41079:CDS |
| GAAAGCTGAAATGGCTAGGC+AGG | 0.460252 | 1.3:+42519366 | MS.gene41079:CDS |
| GTTTATGCAGTGTTATCCCT+AGG | 0.460934 | 1.3:+42519147 | MS.gene41079:intron |
| GGTTTATGGAGGTGGTAGTG+TGG | 0.474379 | 1.3:+42518189 | MS.gene41079:CDS |
| GATACATATTCATCTTGCTC+AGG | 0.480241 | 1.3:-42521521 | None:intergenic |
| ATTGACAAGGCCGTTGATGA+AGG | 0.480397 | 1.3:+42521216 | MS.gene41079:CDS |
| CAGCTCTCACTTCCCCAATA+GGG | 0.481416 | 1.3:-42519324 | None:intergenic |
| ATTGCTGGAAATTATTACTT+GGG | 0.482520 | 1.3:+42519804 | MS.gene41079:CDS |
| TAATTTCCAGCAATTCTTCA+AGG | 0.488686 | 1.3:-42519795 | None:intergenic |
| TCTTTCTTCCCACACCAACT+TGG | 0.497589 | 1.3:-42521543 | None:intergenic |
| AGGATTGATTTGGTTTATGG+AGG | 0.498565 | 1.3:+42518178 | MS.gene41079:CDS |
| TGGTCGAAAATGCAGATAAC+TGG | 0.500494 | 1.3:+42519298 | MS.gene41079:intron |
| TTATTACTTGGGCTCAACTT+GGG | 0.511742 | 1.3:+42519815 | MS.gene41079:CDS |
| CAATGTTGAAGGTTGAGAGA+AGG | 0.514544 | 1.3:+42518158 | MS.gene41079:intron |
| AATTTCCAGCAATTCTTCAA+GGG | 0.517255 | 1.3:-42519794 | None:intergenic |
| TGTTGAACTAGCAAAAGAAA+TGG | 0.525403 | 1.3:+42517286 | MS.gene41079:CDS |
| CCTAACCAATTCCTTGGCTG+TGG | 0.525618 | 1.3:-42521280 | None:intergenic |
| TCTACTGTGGTAGCAGTTCA+GGG | 0.526335 | 1.3:+42517237 | MS.gene41079:CDS |
| TAATCCCCTAACCAATTCCT+TGG | 0.543230 | 1.3:-42521286 | None:intergenic |
| ACTTGGGATCCACAGCAAAC+CGG | 0.543825 | 1.3:+42519831 | MS.gene41079:CDS |
| CTGTATCTGATATGCATCAA+AGG | 0.557918 | 1.3:+42519344 | MS.gene41079:CDS |
| GTTTCTCAAGCAGTTCATGA+TGG | 0.562470 | 1.3:+42518226 | MS.gene41079:CDS |
| TGGTTCTTACCGGTTTGCTG+TGG | 0.572186 | 1.3:-42519840 | None:intergenic |
| AAAGGAAAGCTGAAATGGCT+AGG | 0.576735 | 1.3:+42519362 | MS.gene41079:CDS |
| TGAAGGCTTTATTTCCCCAA+AGG | 0.581047 | 1.3:+42521233 | MS.gene41079:CDS |
| GTGGGTCTATTGAATGTGGA+TGG | 0.585448 | 1.3:+42521168 | MS.gene41079:CDS |
| GGAAATAAAGCCTTCATCAA+CGG | 0.588345 | 1.3:-42521226 | None:intergenic |
| CCAAGATTTCATACCAGGAA+GGG | 0.596878 | 1.3:-42519404 | None:intergenic |
| GATAATGCGACGTGCCTTTG+GGG | 0.597193 | 1.3:-42521247 | None:intergenic |
| ATTGTTGTGTTTCATTGACA+AGG | 0.598135 | 1.3:+42521203 | MS.gene41079:CDS |
| CGTGTCAGCATCCACAGCCA+AGG | 0.598380 | 1.3:+42521269 | MS.gene41079:CDS |
| GCCAAGATTTCATACCAGGA+AGG | 0.602177 | 1.3:-42519405 | None:intergenic |
| GCAGGTGGGTCTATTGAATG+TGG | 0.607073 | 1.3:+42521164 | MS.gene41079:intron |
| AGATGAATATGTATCCAAGT+TGG | 0.616544 | 1.3:+42521529 | MS.gene41079:CDS |
| AAGAAACTAACCCAAGAACA+TGG | 0.618263 | 1.3:-42518255 | None:intergenic |
| GATAACTGGTGACCCTATTG+GGG | 0.618479 | 1.3:+42519312 | MS.gene41079:intron |
| AATATGTATCCAAGTTGGTG+TGG | 0.623210 | 1.3:+42521534 | MS.gene41079:CDS |
| ACAGCCAAGGAATTGGTTAG+GGG | 0.625582 | 1.3:+42521282 | MS.gene41079:CDS |
| CTCTTGGCATGAGACTCCTA+GGG | 0.627464 | 1.3:-42519163 | None:intergenic |
| AAGAGGATTTGTGTCTACTG+TGG | 0.635693 | 1.3:+42517224 | MS.gene41079:CDS |
| TCTCAAGCAGTTCATGATGG+CGG | 0.641857 | 1.3:+42518229 | MS.gene41079:CDS |
| TAGGAGTCTCATGCCAAGAG+AGG | 0.642075 | 1.3:+42519166 | MS.gene41079:CDS |
| ATATGTATCCAAGTTGGTGT+GGG | 0.680600 | 1.3:+42521535 | MS.gene41079:CDS |
| TCTTATATAAGATCATCACA+TGG | 0.748551 | 1.3:-42521594 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAT+AGG | - | chr1.3:42517932-42517951 | None:intergenic | 0.0% |
| !! | AAAATAAAATTAAAAAAATT+TGG | - | chr1.3:42517960-42517979 | None:intergenic | 0.0% |
| !! | AAATAAAATTAAAAAAATTT+GGG | - | chr1.3:42517959-42517978 | None:intergenic | 0.0% |
| !! | GAAAAAATAAAAATAAACAA+AGG | - | chr1.3:42517555-42517574 | None:intergenic | 10.0% |
| !! | TATAAATTTACTATATAATG+TGG | + | chr1.3:42518731-42518750 | MS.gene41079:intron | 10.0% |
| !!! | ATGTTTTAGTTTTTTTTTTT+GGG | + | chr1.3:42520500-42520519 | MS.gene41079:intron | 10.0% |
| !!! | TATGTTTTAGTTTTTTTTTT+TGG | + | chr1.3:42520499-42520518 | MS.gene41079:intron | 10.0% |
| !!! | TTAAATTTTACTTGTATTTT+AGG | - | chr1.3:42519906-42519925 | None:intergenic | 10.0% |
| !!! | TTGATTGTTTAATATTTTTA+TGG | + | chr1.3:42521140-42521159 | MS.gene41079:intron | 10.0% |
| !! | ATAAATAAAAAAGAGTAGTA+TGG | - | chr1.3:42519863-42519882 | None:intergenic | 15.0% |
| !! | TTTGTTAATAAAATATATGG+TGG | + | chr1.3:42519278-42519297 | MS.gene41079:intron | 15.0% |
| !!! | AACTTCTGTATTTTAAAAAT+AGG | + | chr1.3:42518324-42518343 | MS.gene41079:intron | 15.0% |
| !!! | ACAAGACAAAAATATTTTAA+TGG | - | chr1.3:42519092-42519111 | None:intergenic | 15.0% |
| !!! | ATAAAGACATTTTTTTTGTA+AGG | - | chr1.3:42517396-42517415 | None:intergenic | 15.0% |
| !!! | CTAGTTTGTTTAATTATAAA+AGG | - | chr1.3:42520219-42520238 | None:intergenic | 15.0% |
| !! | ACAAAAAAAATATGAACATG+AGG | - | chr1.3:42517489-42517508 | None:intergenic | 20.0% |
| !! | ACTATATAATGTGGTTAATT+TGG | + | chr1.3:42518740-42518759 | MS.gene41079:intron | 20.0% |
| !! | ATAAAAATCATGAAAGATTG+TGG | - | chr1.3:42517892-42517911 | None:intergenic | 20.0% |
| !! | ATAAAATATTAGTAGAGTGT+GGG | + | chr1.3:42518629-42518648 | MS.gene41079:intron | 20.0% |
| !! | ATTGAAATCATTAATTTCTC+AGG | - | chr1.3:42518589-42518608 | None:intergenic | 20.0% |
| !! | ATTGTTGAGTTTATATAAAG+CGG | + | chr1.3:42518774-42518793 | MS.gene41079:intron | 20.0% |
| !! | ATTTCAATGTAAGACATTAT+GGG | + | chr1.3:42518601-42518620 | MS.gene41079:intron | 20.0% |
| !! | TAAAAATCATGAAAGATTGT+GGG | - | chr1.3:42517891-42517910 | None:intergenic | 20.0% |
| !! | TATGTCTTATGATAACAAAT+TGG | - | chr1.3:42520017-42520036 | None:intergenic | 20.0% |
| !! | TATTGAATATAAAGTGAAGA+TGG | - | chr1.3:42521340-42521359 | None:intergenic | 20.0% |
| !! | TCTACAAAAATTAATGTATC+TGG | + | chr1.3:42519926-42519945 | MS.gene41079:intron | 20.0% |
| !! | TTATGTCTCTATTATAACTT+TGG | - | chr1.3:42520115-42520134 | None:intergenic | 20.0% |
| !! | TTGAAATCATTAATTTCTCA+GGG | - | chr1.3:42518588-42518607 | None:intergenic | 20.0% |
| !!! | AAAACAATGGTTTTTAAACA+TGG | - | chr1.3:42520447-42520466 | None:intergenic | 20.0% |
| !!! | ATGTGTATAACTTTTACTTA+TGG | + | chr1.3:42518815-42518834 | MS.gene41079:intron | 20.0% |
| !!! | ATTTTACTTGTATTTTAGGA+CGG | - | chr1.3:42519902-42519921 | None:intergenic | 20.0% |
| !!! | GTAACATAAGTTGATATATT+TGG | - | chr1.3:42519968-42519987 | None:intergenic | 20.0% |
| !!! | TCATGTTCATATTTTTTTTG+TGG | + | chr1.3:42517488-42517507 | MS.gene41079:intron | 20.0% |
| !!! | TCTTGTTATTTTGAAACATT+AGG | + | chr1.3:42519760-42519779 | MS.gene41079:intron | 20.0% |
| !!! | TTTTATAAAGTTCCAAATCT+AGG | + | chr1.3:42517586-42517605 | MS.gene41079:intron | 20.0% |
| ! | AAACCAAATCAAAGTTTAAG+AGG | + | chr1.3:42517207-42517226 | MS.gene41079:CDS | 25.0% |
| ! | AATCCTCTTAAACTTTGATT+TGG | - | chr1.3:42517213-42517232 | None:intergenic | 25.0% |
| ! | AATTGCTGGAAATTATTACT+TGG | + | chr1.3:42519803-42519822 | MS.gene41079:CDS | 25.0% |
| ! | ACATGAAAAGATAGTACTTT+AGG | + | chr1.3:42520644-42520663 | MS.gene41079:intron | 25.0% |
| ! | ATACATATTGCTAAAACAAG+TGG | + | chr1.3:42521429-42521448 | MS.gene41079:intron | 25.0% |
| ! | ATTGCTGGAAATTATTACTT+GGG | + | chr1.3:42519804-42519823 | MS.gene41079:CDS | 25.0% |
| ! | CATAAAATATTAGTAGAGTG+TGG | + | chr1.3:42518628-42518647 | MS.gene41079:intron | 25.0% |
| ! | CTATAACCAAAGAAGTAAAA+CGG | - | chr1.3:42520047-42520066 | None:intergenic | 25.0% |
| ! | CTTAAGATACGTAAAAACAA+TGG | - | chr1.3:42520460-42520479 | None:intergenic | 25.0% |
| ! | CTTTGTATCATTACACTATA+CGG | + | chr1.3:42517840-42517859 | MS.gene41079:intron | 25.0% |
| ! | GACTAATGATGTATGTTATA+TGG | + | chr1.3:42519119-42519138 | MS.gene41079:intron | 25.0% |
| ! | GATTTCAATGTAAGACATTA+TGG | + | chr1.3:42518600-42518619 | MS.gene41079:intron | 25.0% |
| ! | TAAGCATGATACATAACATT+AGG | + | chr1.3:42520566-42520585 | MS.gene41079:intron | 25.0% |
| ! | TACATATTGCTAAAACAAGT+GGG | + | chr1.3:42521430-42521449 | MS.gene41079:intron | 25.0% |
| ! | TACATTTAGAAGCTTCTATA+GGG | - | chr1.3:42518678-42518697 | None:intergenic | 25.0% |
| ! | TCTGTAAAAAATAAGCCAAA+AGG | - | chr1.3:42518879-42518898 | None:intergenic | 25.0% |
| ! | TTACTTCTTTGGTTATAGTT+GGG | + | chr1.3:42520049-42520068 | MS.gene41079:intron | 25.0% |
| ! | TTGTTGAGTTTATATAAAGC+GGG | + | chr1.3:42518775-42518794 | MS.gene41079:intron | 25.0% |
| ! | TTTACTTCTTTGGTTATAGT+TGG | + | chr1.3:42520048-42520067 | MS.gene41079:intron | 25.0% |
| ! | TTTCAATGTAAGACATTATG+GGG | + | chr1.3:42518602-42518621 | MS.gene41079:intron | 25.0% |
| !! | ATAGAGATTGATTGATTTAG+TGG | - | chr1.3:42517996-42518015 | None:intergenic | 25.0% |
| !! | TTAGTAATTCACATTTTCGT+CGG | + | chr1.3:42520963-42520982 | MS.gene41079:intron | 25.0% |
| !! | TTTATTGATTGCTAAGAAGT+GGG | + | chr1.3:42518522-42518541 | MS.gene41079:intron | 25.0% |
| !!! | CATTTTTAGGAATACTTCAT+CGG | + | chr1.3:42519490-42519509 | MS.gene41079:intron | 25.0% |
| !!! | GTTTAATATTTTTATGGTGC+AGG | + | chr1.3:42521146-42521165 | MS.gene41079:intron | 25.0% |
| !!! | TGTTATTTTGAAACATTAGG+TGG | + | chr1.3:42519763-42519782 | MS.gene41079:intron | 25.0% |
| !!! | TTTTATTGATTGCTAAGAAG+TGG | + | chr1.3:42518521-42518540 | MS.gene41079:intron | 25.0% |
| !!! | TTTTGAAGACATTGGTTAAA+AGG | + | chr1.3:42518847-42518866 | MS.gene41079:intron | 25.0% |
| AAAAAAAAATAGGTAGCCCT+TGG | - | chr1.3:42517922-42517941 | None:intergenic | 30.0% | |
| AAAACTAAGATCATGCAAGA+AGG | - | chr1.3:42517679-42517698 | None:intergenic | 30.0% | |
| AAAGGAAAAGGCAAAAACAT+TGG | - | chr1.3:42518925-42518944 | None:intergenic | 30.0% | |
| AATCTAGGTTAAGATTGTTG+AGG | + | chr1.3:42517601-42517620 | MS.gene41079:intron | 30.0% | |
| AATGTATGAAGCCTCTAATA+TGG | - | chr1.3:42519619-42519638 | None:intergenic | 30.0% | |
| AATTTCCAGCAATTCTTCAA+GGG | - | chr1.3:42519797-42519816 | None:intergenic | 30.0% | |
| ACATTTAGAAGCTTCTATAG+GGG | - | chr1.3:42518677-42518696 | None:intergenic | 30.0% | |
| AGATGAATATGTATCCAAGT+TGG | + | chr1.3:42521529-42521548 | MS.gene41079:CDS | 30.0% | |
| AGGATATTATCATGTGAAGT+GGG | + | chr1.3:42519697-42519716 | MS.gene41079:intron | 30.0% | |
| ATAAACAAAGGAGAAGAAAG+AGG | - | chr1.3:42517543-42517562 | None:intergenic | 30.0% | |
| ATAATTGAACCGAAACATGT+GGG | + | chr1.3:42520604-42520623 | MS.gene41079:intron | 30.0% | |
| ATATCTTTCTCCCATTCAAA+TGG | - | chr1.3:42520740-42520759 | None:intergenic | 30.0% | |
| ATTGTTGTGTTTCATTGACA+AGG | + | chr1.3:42521203-42521222 | MS.gene41079:CDS | 30.0% | |
| ATTTGGTTAACACATGAAGT+TGG | + | chr1.3:42519727-42519746 | MS.gene41079:intron | 30.0% | |
| CAAAAAACCAATAAAGCTGT+TGG | + | chr1.3:42520813-42520832 | MS.gene41079:intron | 30.0% | |
| CAACAATCTTAACCTAGATT+TGG | - | chr1.3:42517601-42517620 | None:intergenic | 30.0% | |
| CATTTAATGTTATGTGAAGC+AGG | + | chr1.3:42521490-42521509 | MS.gene41079:intron | 30.0% | |
| CTACACTAGTAAAACATGAA+AGG | + | chr1.3:42519427-42519446 | MS.gene41079:intron | 30.0% | |
| CTACATTTAGAAGCTTCTAT+AGG | - | chr1.3:42518679-42518698 | None:intergenic | 30.0% | |
| CTATAGAAGCTTCTAAATGT+AGG | + | chr1.3:42518677-42518696 | MS.gene41079:intron | 30.0% | |
| CTTCTAAATGTAGGATGTAA+GGG | + | chr1.3:42518686-42518705 | MS.gene41079:intron | 30.0% | |
| GATATATGACGTTAGATTGA+TGG | + | chr1.3:42520710-42520729 | MS.gene41079:intron | 30.0% | |
| GTCTATATCTATGTGTTTGT+TGG | + | chr1.3:42518478-42518497 | MS.gene41079:intron | 30.0% | |
| GTTGAAAATACACACAATCT+AGG | + | chr1.3:42518392-42518411 | MS.gene41079:intron | 30.0% | |
| TAATTTCCAGCAATTCTTCA+AGG | - | chr1.3:42519798-42519817 | None:intergenic | 30.0% | |
| TACTTCTTTGGTTATAGTTG+GGG | + | chr1.3:42520050-42520069 | MS.gene41079:intron | 30.0% | |
| TAGGATATTATCATGTGAAG+TGG | + | chr1.3:42519696-42519715 | MS.gene41079:intron | 30.0% | |
| TATAATTGAACCGAAACATG+TGG | + | chr1.3:42520603-42520622 | MS.gene41079:intron | 30.0% | |
| TGTTGAACTAGCAAAAGAAA+TGG | + | chr1.3:42517286-42517305 | MS.gene41079:CDS | 30.0% | |
| TGTTGAGTTTATATAAAGCG+GGG | + | chr1.3:42518776-42518795 | MS.gene41079:intron | 30.0% | |
| TTCAATGTAAGACATTATGG+GGG | + | chr1.3:42518603-42518622 | MS.gene41079:intron | 30.0% | |
| ! | AGAGCAATTCACATTTTTGT+CGG | + | chr1.3:42520881-42520900 | MS.gene41079:intron | 30.0% |
| ! | CGATGAAGTATTCCTAAAAA+TGG | - | chr1.3:42519492-42519511 | None:intergenic | 30.0% |
| ! | GATTTTTATCCTATAGCCAA+GGG | + | chr1.3:42517903-42517922 | MS.gene41079:intron | 30.0% |
| ! | GTTTGTGTTTTCAATGTTGA+AGG | + | chr1.3:42518147-42518166 | MS.gene41079:intron | 30.0% |
| ! | TGATTTTTATCCTATAGCCA+AGG | + | chr1.3:42517902-42517921 | MS.gene41079:intron | 30.0% |
| ! | TTTGAAACATTAGGTGGATA+TGG | + | chr1.3:42519769-42519788 | MS.gene41079:intron | 30.0% |
| ! | TTTGGTTCAATGAAAGTCTT+CGG | - | chr1.3:42519594-42519613 | None:intergenic | 30.0% |
| !! | AATATTTTTATGGTGCAGGT+GGG | + | chr1.3:42521150-42521169 | MS.gene41079:intron | 30.0% |
| !! | AGAAGGATTGATTTGGTTTA+TGG | + | chr1.3:42518175-42518194 | MS.gene41079:CDS | 30.0% |
| !! | ATTTTCAACTAGAGTTCTGA+TGG | - | chr1.3:42518381-42518400 | None:intergenic | 30.0% |
| !! | TAATATTTTTATGGTGCAGG+TGG | + | chr1.3:42521149-42521168 | MS.gene41079:intron | 30.0% |
| !! | TAGAAGCTTTTTGAAGACAT+TGG | + | chr1.3:42518839-42518858 | MS.gene41079:intron | 30.0% |
| !! | TTGTTACTTTCTTTCTTGCT+TGG | + | chr1.3:42518079-42518098 | MS.gene41079:intron | 30.0% |
| !! | TTTTCAACTAGAGTTCTGAT+GGG | - | chr1.3:42518380-42518399 | None:intergenic | 30.0% |
| !!! | AGATTGTTTTATTTGCTAGC+TGG | + | chr1.3:42517631-42517650 | MS.gene41079:intron | 30.0% |
| !!! | TATATGCCGTTTTACTTCTT+TGG | + | chr1.3:42520038-42520057 | MS.gene41079:intron | 30.0% |
| AAAGGACAGCATTAACTCAA+TGG | - | chr1.3:42519196-42519215 | None:intergenic | 35.0% | |
| AAGAAACTAACCCAAGAACA+TGG | - | chr1.3:42518258-42518277 | None:intergenic | 35.0% | |
| AAGAGTAGTATGGTTCTTAC+CGG | - | chr1.3:42519853-42519872 | None:intergenic | 35.0% | |
| AAGATTGTGGGAAATGGTAA+AGG | - | chr1.3:42517879-42517898 | None:intergenic | 35.0% | |
| ACTTCTTTGGTTATAGTTGG+GGG | + | chr1.3:42520051-42520070 | MS.gene41079:intron | 35.0% | |
| ACTTTCTTTCTTGCTTGGTT+TGG | + | chr1.3:42518084-42518103 | MS.gene41079:intron | 35.0% | |
| ATTATTACTTGGGCTCAACT+TGG | + | chr1.3:42519814-42519833 | MS.gene41079:CDS | 35.0% | |
| ATTCAATACCCCACATGTTT+CGG | - | chr1.3:42520616-42520635 | None:intergenic | 35.0% | |
| ATTTAGAAGCTTCTATAGGG+GGG | - | chr1.3:42518675-42518694 | None:intergenic | 35.0% | |
| CATTTAGAAGCTTCTATAGG+GGG | - | chr1.3:42518676-42518695 | None:intergenic | 35.0% | |
| CTGTATCTGATATGCATCAA+AGG | + | chr1.3:42519344-42519363 | MS.gene41079:CDS | 35.0% | |
| GATACATATTCATCTTGCTC+AGG | - | chr1.3:42521524-42521543 | None:intergenic | 35.0% | |
| GCTTCTAAATGTAGGATGTA+AGG | + | chr1.3:42518685-42518704 | MS.gene41079:intron | 35.0% | |
| GGAAATAAAGCCTTCATCAA+CGG | - | chr1.3:42521229-42521248 | None:intergenic | 35.0% | |
| GTATGACATGCATCATAGAT+AGG | - | chr1.3:42520407-42520426 | None:intergenic | 35.0% | |
| GTGAAGTGGGATTCTTAATT+TGG | + | chr1.3:42519710-42519729 | MS.gene41079:intron | 35.0% | |
| TAATTGAACCGAAACATGTG+GGG | + | chr1.3:42520605-42520624 | MS.gene41079:intron | 35.0% | |
| TCATGAAAGATTGTGGGAAA+TGG | - | chr1.3:42517885-42517904 | None:intergenic | 35.0% | |
| TCATTAATTTCTCAGGGAAC+AGG | - | chr1.3:42518582-42518601 | None:intergenic | 35.0% | |
| TGAACCAAAGACCATATTAG+AGG | + | chr1.3:42519605-42519624 | MS.gene41079:intron | 35.0% | |
| TGATGGTTCTCCATTTGAAT+GGG | + | chr1.3:42520727-42520746 | MS.gene41079:intron | 35.0% | |
| TTATTACTTGGGCTCAACTT+GGG | + | chr1.3:42519815-42519834 | MS.gene41079:CDS | 35.0% | |
| ! | AATGCTTTCTGCACTTTTCT+AGG | + | chr1.3:42517800-42517819 | MS.gene41079:intron | 35.0% |
| ! | ACATTTTTGTCGGTAGTCAT+GGG | + | chr1.3:42520891-42520910 | MS.gene41079:intron | 35.0% |
| ! | AGAAGAAAGAGGTGTAACAA+GGG | - | chr1.3:42517532-42517551 | None:intergenic | 35.0% |
| ! | CTATGTGTTTGTTGGATGAA+AGG | + | chr1.3:42518486-42518505 | MS.gene41079:intron | 35.0% |
| ! | GTTAAAAGGTGAATGCCTTT+TGG | + | chr1.3:42518861-42518880 | MS.gene41079:intron | 35.0% |
| ! | TTGATGGTTCTCCATTTGAA+TGG | + | chr1.3:42520726-42520745 | MS.gene41079:intron | 35.0% |
| ! | TTTTACAGAAAGTTCATGCG+CGG | + | chr1.3:42518890-42518909 | MS.gene41079:intron | 35.0% |
| !! | AATATGTATCCAAGTTGGTG+TGG | + | chr1.3:42521534-42521553 | MS.gene41079:CDS | 35.0% |
| !! | AGGATTGATTTGGTTTATGG+AGG | + | chr1.3:42518178-42518197 | MS.gene41079:CDS | 35.0% |
| !! | ATATGTATCCAAGTTGGTGT+GGG | + | chr1.3:42521535-42521554 | MS.gene41079:CDS | 35.0% |
| !! | ATTGATTTGGTTTATGGAGG+TGG | + | chr1.3:42518181-42518200 | MS.gene41079:CDS | 35.0% |
| !! | GTGTCGAATTGACCATTTTT+AGG | + | chr1.3:42519477-42519496 | MS.gene41079:intron | 35.0% |
| !!! | CTTCATCGGTTTTTGTTTAC+CGG | + | chr1.3:42519504-42519523 | MS.gene41079:intron | 35.0% |
| AAAATGGTCAATTCGACACG+TGG | - | chr1.3:42519476-42519495 | None:intergenic | 40.0% | |
| AAAGGAAAGCTGAAATGGCT+AGG | + | chr1.3:42519362-42519381 | MS.gene41079:CDS | 40.0% | |
| AAATGGTCAATTCGACACGT+GGG | - | chr1.3:42519475-42519494 | None:intergenic | 40.0% | |
| AAGAGGATTTGTGTCTACTG+TGG | + | chr1.3:42517224-42517243 | MS.gene41079:CDS | 40.0% | |
| AAGTGAAGATGGTTGAGCAA+TGG | - | chr1.3:42521329-42521348 | None:intergenic | 40.0% | |
| AATTCCAGAGAGTTCACAAG+AGG | - | chr1.3:42520254-42520273 | None:intergenic | 40.0% | |
| ACTCAATGGTTTACCTCTCT+TGG | - | chr1.3:42519182-42519201 | None:intergenic | 40.0% | |
| AGAGCATACTCATGTGAAGT+AGG | + | chr1.3:42519677-42519696 | MS.gene41079:intron | 40.0% | |
| AGATAACTGGTGACCCTATT+GGG | + | chr1.3:42519311-42519330 | MS.gene41079:intron | 40.0% | |
| ATCCACATGTGGACCATATA+TGG | + | chr1.3:42519537-42519556 | MS.gene41079:intron | 40.0% | |
| CAAAGTGCATGCAAGTGAAA+AGG | - | chr1.3:42518943-42518962 | None:intergenic | 40.0% | |
| CAATGTTGAAGGTTGAGAGA+AGG | + | chr1.3:42518158-42518177 | MS.gene41079:intron | 40.0% | |
| CATGTGGATCTGGTAAAATC+CGG | - | chr1.3:42519526-42519545 | None:intergenic | 40.0% | |
| CCAAGATTTCATACCAGGAA+GGG | - | chr1.3:42519407-42519426 | None:intergenic | 40.0% | |
| CCAATAAAGCTGTTGGTCAA+TGG | + | chr1.3:42520820-42520839 | MS.gene41079:intron | 40.0% | |
| GAAGCCTCTAATATGGTCTT+TGG | - | chr1.3:42519612-42519631 | None:intergenic | 40.0% | |
| GATCTTATTGCAACGAGCAA+AGG | - | chr1.3:42519214-42519233 | None:intergenic | 40.0% | |
| GCATCAAAGGAAAGCTGAAA+TGG | + | chr1.3:42519357-42519376 | MS.gene41079:CDS | 40.0% | |
| GCATGCAAGTGAAAAGGAAA+AGG | - | chr1.3:42518937-42518956 | None:intergenic | 40.0% | |
| GGGATCTGATGCATTAATGT+TGG | - | chr1.3:42518360-42518379 | None:intergenic | 40.0% | |
| GGTTGAGAGAAGGATTGATT+TGG | + | chr1.3:42518168-42518187 | MS.gene41079:intron | 40.0% | |
| GTTTATGCAGTGTTATCCCT+AGG | + | chr1.3:42519147-42519166 | MS.gene41079:intron | 40.0% | |
| GTTTCTCAAGCAGTTCATGA+TGG | + | chr1.3:42518226-42518245 | MS.gene41079:CDS | 40.0% | |
| TAATCCCCTAACCAATTCCT+TGG | - | chr1.3:42521289-42521308 | None:intergenic | 40.0% | |
| TCACATGGCAACTTCTGATT+CGG | - | chr1.3:42521582-42521601 | None:intergenic | 40.0% | |
| TCATAGATAGGAGGCAAAGT+TGG | - | chr1.3:42520395-42520414 | None:intergenic | 40.0% | |
| TGACATGCATCATAGATAGG+AGG | - | chr1.3:42520404-42520423 | None:intergenic | 40.0% | |
| TGGTCGAAAATGCAGATAAC+TGG | + | chr1.3:42519298-42519317 | MS.gene41079:intron | 40.0% | |
| TGTAGCCAAGATTTCATACC+AGG | - | chr1.3:42519412-42519431 | None:intergenic | 40.0% | |
| TTTACAGAAAGTTCATGCGC+GGG | + | chr1.3:42518891-42518910 | MS.gene41079:intron | 40.0% | |
| ! | ATAGGAGGCAAAGTTGGTTA+AGG | - | chr1.3:42520389-42520408 | None:intergenic | 40.0% |
| ! | CACATTTTTGTCGGTAGTCA+TGG | + | chr1.3:42520890-42520909 | MS.gene41079:intron | 40.0% |
| ! | CCATTGACCAACAGCTTTAT+TGG | - | chr1.3:42520823-42520842 | None:intergenic | 40.0% |
| ! | GAGAAGAAAGAGGTGTAACA+AGG | - | chr1.3:42517533-42517552 | None:intergenic | 40.0% |
| ! | GATTTTACCAGATCCACATG+TGG | + | chr1.3:42519526-42519545 | MS.gene41079:intron | 40.0% |
| !! | TGAAGGCTTTATTTCCCCAA+AGG | + | chr1.3:42521233-42521252 | MS.gene41079:CDS | 40.0% |
| AATAGGTAGCCCTTGGCTAT+AGG | - | chr1.3:42517915-42517934 | None:intergenic | 45.0% | |
| AATTTCTCAGGGAACAGGCA+TGG | - | chr1.3:42518577-42518596 | None:intergenic | 45.0% | |
| ACAGCAGCTTCTTGGTAAGT+AGG | - | chr1.3:42517269-42517288 | None:intergenic | 45.0% | |
| ACAGCCAAGGAATTGGTTAG+GGG | + | chr1.3:42521282-42521301 | MS.gene41079:CDS | 45.0% | |
| ATATGGTCCACATGTGGATC+TGG | - | chr1.3:42519536-42519555 | None:intergenic | 45.0% | |
| ATTTCTCAGGGAACAGGCAT+GGG | - | chr1.3:42518576-42518595 | None:intergenic | 45.0% | |
| CAACAACTGTTGTAGCAGAC+CGG | - | chr1.3:42519564-42519583 | None:intergenic | 45.0% | |
| CACAGCCAAGGAATTGGTTA+GGG | + | chr1.3:42521281-42521300 | MS.gene41079:CDS | 45.0% | |
| CACATGGCAACTTCTGATTC+GGG | - | chr1.3:42521581-42521600 | None:intergenic | 45.0% | |
| CAGATAACTGGTGACCCTAT+TGG | + | chr1.3:42519310-42519329 | MS.gene41079:intron | 45.0% | |
| CATGTGGACCATATATGGAC+CGG | + | chr1.3:42519542-42519561 | MS.gene41079:intron | 45.0% | |
| CCCTTCCTGGTATGAAATCT+TGG | + | chr1.3:42519404-42519423 | MS.gene41079:intron | 45.0% | |
| CTAGTTCAACAGCAGCTTCT+TGG | - | chr1.3:42517277-42517296 | None:intergenic | 45.0% | |
| GATAACTGGTGACCCTATTG+GGG | + | chr1.3:42519312-42519331 | MS.gene41079:intron | 45.0% | |
| GCCAAGATTTCATACCAGGA+AGG | - | chr1.3:42519408-42519427 | None:intergenic | 45.0% | |
| GGAATTGGTTAGGGGATTAG+AGG | + | chr1.3:42521290-42521309 | MS.gene41079:CDS | 45.0% | |
| GTCCATATATGGTCCACATG+TGG | - | chr1.3:42519542-42519561 | None:intergenic | 45.0% | |
| GTGGGTCTATTGAATGTGGA+TGG | + | chr1.3:42521168-42521187 | MS.gene41079:CDS | 45.0% | |
| TAACTAGAGACATGCCTGAG+AGG | + | chr1.3:42520154-42520173 | MS.gene41079:intron | 45.0% | |
| TCTACTGTGGTAGCAGTTCA+GGG | + | chr1.3:42517237-42517256 | MS.gene41079:CDS | 45.0% | |
| TCTCAAGCAGTTCATGATGG+CGG | + | chr1.3:42518229-42518248 | MS.gene41079:CDS | 45.0% | |
| TCTTTCTTCCCACACCAACT+TGG | - | chr1.3:42521546-42521565 | None:intergenic | 45.0% | |
| TGGAACCCTTGAAGAATTGC+TGG | + | chr1.3:42519789-42519808 | MS.gene41079:CDS | 45.0% | |
| TTATTCCATTCCCACCTCTC+AGG | - | chr1.3:42520171-42520190 | None:intergenic | 45.0% | |
| ! | ATTGACAAGGCCGTTGATGA+AGG | + | chr1.3:42521216-42521235 | MS.gene41079:CDS | 45.0% |
| ! | GTTTATGGAGGTGGTAGTGT+GGG | + | chr1.3:42518190-42518209 | MS.gene41079:CDS | 45.0% |
| !!! | TAATTTGTTAATAAAATATA+TGG | + | chr1.3:42519275-42519294 | MS.gene41079:intron | 5.0% |
| !!! | TAGATTTTTTTTATATTTTA+TGG | + | chr1.3:42517416-42517435 | MS.gene41079:intron | 5.0% |
| !!! | TTTTTTTCTTTTTAATTATT+CGG | + | chr1.3:42520353-42520372 | MS.gene41079:intron | 5.0% |
| ACAGCTCTCACTTCCCCAAT+AGG | - | chr1.3:42519328-42519347 | None:intergenic | 50.0% | |
| ACGATAATGCGACGTGCCTT+TGG | - | chr1.3:42521252-42521271 | None:intergenic | 50.0% | |
| ACTTGGGATCCACAGCAAAC+CGG | + | chr1.3:42519831-42519850 | MS.gene41079:CDS | 50.0% | |
| AGCATCCACAGCCAAGGAAT+TGG | + | chr1.3:42521275-42521294 | MS.gene41079:CDS | 50.0% | |
| CAGCTCTCACTTCCCCAATA+GGG | - | chr1.3:42519327-42519346 | None:intergenic | 50.0% | |
| CCACAGCCAAGGAATTGGTT+AGG | + | chr1.3:42521280-42521299 | MS.gene41079:CDS | 50.0% | |
| CCTAACCAATTCCTTGGCTG+TGG | - | chr1.3:42521283-42521302 | None:intergenic | 50.0% | |
| CGATAATGCGACGTGCCTTT+GGG | - | chr1.3:42521251-42521270 | None:intergenic | 50.0% | |
| CTCTTGGCATGAGACTCCTA+GGG | - | chr1.3:42519166-42519185 | None:intergenic | 50.0% | |
| CTTGCCTCTTGTGAACTCTC+TGG | + | chr1.3:42520247-42520266 | MS.gene41079:intron | 50.0% | |
| GAAAGCTGAAATGGCTAGGC+AGG | + | chr1.3:42519366-42519385 | MS.gene41079:CDS | 50.0% | |
| GAAAGTTCATGCGCGGGAAT+TGG | + | chr1.3:42518897-42518916 | MS.gene41079:intron | 50.0% | |
| GATAATGCGACGTGCCTTTG+GGG | - | chr1.3:42521250-42521269 | None:intergenic | 50.0% | |
| GATGCATTCATTGCCCTTCC+TGG | + | chr1.3:42519391-42519410 | MS.gene41079:CDS | 50.0% | |
| GCAGGTGGGTCTATTGAATG+TGG | + | chr1.3:42521164-42521183 | MS.gene41079:intron | 50.0% | |
| GTAGCAGACCGGTCCATATA+TGG | - | chr1.3:42519553-42519572 | None:intergenic | 50.0% | |
| GTCTACTGTGGTAGCAGTTC+AGG | + | chr1.3:42517236-42517255 | MS.gene41079:CDS | 50.0% | |
| TAGAGACATGCCTGAGAGGT+GGG | + | chr1.3:42520158-42520177 | MS.gene41079:intron | 50.0% | |
| TAGGAGTCTCATGCCAAGAG+AGG | + | chr1.3:42519166-42519185 | MS.gene41079:CDS | 50.0% | |
| TCTCTTGGCATGAGACTCCT+AGG | - | chr1.3:42519167-42519186 | None:intergenic | 50.0% | |
| ! | GGTTTATGGAGGTGGTAGTG+TGG | + | chr1.3:42518189-42518208 | MS.gene41079:CDS | 50.0% |
| !! | TGGTTCTTACCGGTTTGCTG+TGG | - | chr1.3:42519843-42519862 | None:intergenic | 50.0% |
| ACATGCCTGAGAGGTGGGAA+TGG | + | chr1.3:42520163-42520182 | MS.gene41079:intron | 55.0% | |
| CTAGAGACATGCCTGAGAGG+TGG | + | chr1.3:42520157-42520176 | MS.gene41079:intron | 55.0% | |
| ! | AGGTGGTAGTGTGGGTCTGA+TGG | + | chr1.3:42518198-42518217 | MS.gene41079:CDS | 55.0% |
| ! | GGTGGTAGTGTGGGTCTGAT+GGG | + | chr1.3:42518199-42518218 | MS.gene41079:CDS | 55.0% |
| !! | ATGGCGGACGCCATGTTCTT+GGG | + | chr1.3:42518245-42518264 | MS.gene41079:CDS | 55.0% |
| CGTGTCAGCATCCACAGCCA+AGG | + | chr1.3:42521269-42521288 | MS.gene41079:CDS | 60.0% | |
| !! | GATGGCGGACGCCATGTTCT+TGG | + | chr1.3:42518244-42518263 | MS.gene41079:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 42517200 | 42521601 | 42517200 | ID=MS.gene41079 |
| chr1.3 | mRNA | 42517200 | 42521601 | 42517200 | ID=MS.gene41079.t1;Parent=MS.gene41079 |
| chr1.3 | exon | 42517200 | 42517307 | 42517200 | ID=MS.gene41079.t1.exon1;Parent=MS.gene41079.t1 |
| chr1.3 | CDS | 42517200 | 42517307 | 42517200 | ID=cds.MS.gene41079.t1;Parent=MS.gene41079.t1 |
| chr1.3 | exon | 42518169 | 42518266 | 42518169 | ID=MS.gene41079.t1.exon2;Parent=MS.gene41079.t1 |
| chr1.3 | CDS | 42518169 | 42518266 | 42518169 | ID=cds.MS.gene41079.t1;Parent=MS.gene41079.t1 |
| chr1.3 | exon | 42519157 | 42519187 | 42519157 | ID=MS.gene41079.t1.exon3;Parent=MS.gene41079.t1 |
| chr1.3 | CDS | 42519157 | 42519187 | 42519157 | ID=cds.MS.gene41079.t1;Parent=MS.gene41079.t1 |
| chr1.3 | exon | 42519313 | 42519412 | 42519313 | ID=MS.gene41079.t1.exon4;Parent=MS.gene41079.t1 |
| chr1.3 | CDS | 42519313 | 42519412 | 42519313 | ID=cds.MS.gene41079.t1;Parent=MS.gene41079.t1 |
| chr1.3 | exon | 42519782 | 42519852 | 42519782 | ID=MS.gene41079.t1.exon5;Parent=MS.gene41079.t1 |
| chr1.3 | CDS | 42519782 | 42519852 | 42519782 | ID=cds.MS.gene41079.t1;Parent=MS.gene41079.t1 |
| chr1.3 | exon | 42521168 | 42521311 | 42521168 | ID=MS.gene41079.t1.exon6;Parent=MS.gene41079.t1 |
| chr1.3 | CDS | 42521168 | 42521311 | 42521168 | ID=cds.MS.gene41079.t1;Parent=MS.gene41079.t1 |
| chr1.3 | exon | 42521512 | 42521601 | 42521512 | ID=MS.gene41079.t1.exon7;Parent=MS.gene41079.t1 |
| chr1.3 | CDS | 42521512 | 42521601 | 42521512 | ID=cds.MS.gene41079.t1;Parent=MS.gene41079.t1 |
| Gene Sequence |
| Protein sequence |
