Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31266.t1 | XP_013465307.1 | 98.6 | 209 | 3 | 0 | 1 | 209 | 1 | 209 | 1.60E-113 | 418.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31266.t1 | Q8RUN2 | 88.9 | 199 | 22 | 0 | 10 | 208 | 5 | 203 | 4.3e-99 | 362.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31266.t1 | A0A072VC46 | 98.6 | 209 | 3 | 0 | 1 | 209 | 1 | 209 | 1.1e-113 | 418.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene31266 | 0.826189 | 3.11E-54 | -1.69E-46 |
| MS.gene049151 | MS.gene31266 | 0.800914 | 1.15E-48 | -1.69E-46 |
| MS.gene049153 | MS.gene31266 | 0.834369 | 3.12E-56 | -1.69E-46 |
| MS.gene049284 | MS.gene31266 | 0.804227 | 2.39E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene31266 | 0.801843 | 7.44E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene31266 | 0.875617 | 2.68E-68 | -1.69E-46 |
| MS.gene049369 | MS.gene31266 | 0.848068 | 7.76E-60 | -1.69E-46 |
| MS.gene049427 | MS.gene31266 | 0.810266 | 1.26E-50 | -1.69E-46 |
| MS.gene049488 | MS.gene31266 | 0.826756 | 2.28E-54 | -1.69E-46 |
| MS.gene049491 | MS.gene31266 | 0.839964 | 1.16E-57 | -1.69E-46 |
| MS.gene049661 | MS.gene31266 | 0.851921 | 6.48E-61 | -1.69E-46 |
| MS.gene049662 | MS.gene31266 | 0.843928 | 1.04E-58 | -1.69E-46 |
| MS.gene049758 | MS.gene31266 | 0.831597 | 1.53E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene31266 | 0.81459 | 1.43E-51 | -1.69E-46 |
| MS.gene049910 | MS.gene31266 | 0.820246 | 7.59E-53 | -1.69E-46 |
| MS.gene050060 | MS.gene31266 | 0.810791 | 9.67E-51 | -1.69E-46 |
| MS.gene050128 | MS.gene31266 | 0.864979 | 8.23E-65 | -1.69E-46 |
| MS.gene050301 | MS.gene31266 | 0.858998 | 5.61E-63 | -1.69E-46 |
| MS.gene050397 | MS.gene31266 | 0.84777 | 9.37E-60 | -1.69E-46 |
| MS.gene050406 | MS.gene31266 | 0.825663 | 4.15E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene31266 | -0.81197 | 5.36E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene31266 | 0.81061 | 1.06E-50 | -1.69E-46 |
| MS.gene050464 | MS.gene31266 | 0.862426 | 5.11E-64 | -1.69E-46 |
| MS.gene050529 | MS.gene31266 | 0.866607 | 2.52E-65 | -1.69E-46 |
| MS.gene050670 | MS.gene31266 | 0.858094 | 1.04E-62 | -1.69E-46 |
| MS.gene050812 | MS.gene31266 | 0.800922 | 1.15E-48 | -1.69E-46 |
| MS.gene050971 | MS.gene31266 | 0.863911 | 1.77E-64 | -1.69E-46 |
| MS.gene05101 | MS.gene31266 | 0.816703 | 4.82E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene31266 | 0.857556 | 1.51E-62 | -1.69E-46 |
| MS.gene051360 | MS.gene31266 | 0.802912 | 4.48E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene31266 | 0.826355 | 2.84E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene31266 | 0.804407 | 2.19E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene31266 | 0.839326 | 1.69E-57 | -1.69E-46 |
| MS.gene051692 | MS.gene31266 | 0.821286 | 4.38E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene31266 | 0.848194 | 7.16E-60 | -1.69E-46 |
| MS.gene052011 | MS.gene31266 | -0.804528 | 2.07E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene31266 | 0.843999 | 9.92E-59 | -1.69E-46 |
| MS.gene052078 | MS.gene31266 | 0.842371 | 2.69E-58 | -1.69E-46 |
| MS.gene052136 | MS.gene31266 | 0.800498 | 1.40E-48 | -1.69E-46 |
| MS.gene052178 | MS.gene31266 | 0.855875 | 4.70E-62 | -1.69E-46 |
| MS.gene052188 | MS.gene31266 | 0.913193 | 8.17E-84 | -1.69E-46 |
| MS.gene052253 | MS.gene31266 | 0.879935 | 8.30E-70 | -1.69E-46 |
| MS.gene052310 | MS.gene31266 | 0.892079 | 2.21E-74 | -1.69E-46 |
| MS.gene052322 | MS.gene31266 | 0.815175 | 1.06E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene31266 | 0.908724 | 1.25E-81 | -1.69E-46 |
| MS.gene052414 | MS.gene31266 | 0.83805 | 3.62E-57 | -1.69E-46 |
| MS.gene052421 | MS.gene31266 | 0.821988 | 3.01E-53 | -1.69E-46 |
| MS.gene052481 | MS.gene31266 | 0.828267 | 9.89E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene31266 | 0.823991 | 1.03E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene31266 | 0.860233 | 2.38E-63 | -1.69E-46 |
| MS.gene053073 | MS.gene31266 | 0.81123 | 7.77E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene31266 | 0.825236 | 5.23E-54 | -1.69E-46 |
| MS.gene05316 | MS.gene31266 | 0.869406 | 3.17E-66 | -1.69E-46 |
| MS.gene053209 | MS.gene31266 | 0.840309 | 9.39E-58 | -1.69E-46 |
| MS.gene053449 | MS.gene31266 | 0.83873 | 2.42E-57 | -1.69E-46 |
| MS.gene053557 | MS.gene31266 | 0.877155 | 7.88E-69 | -1.69E-46 |
| MS.gene053758 | MS.gene31266 | 0.873779 | 1.13E-67 | -1.69E-46 |
| MS.gene053813 | MS.gene31266 | 0.824332 | 8.55E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene31266 | 0.848208 | 7.09E-60 | -1.69E-46 |
| MS.gene053912 | MS.gene31266 | 0.870478 | 1.42E-66 | -1.69E-46 |
| MS.gene053928 | MS.gene31266 | 0.807898 | 4.04E-50 | -1.69E-46 |
| MS.gene054010 | MS.gene31266 | 0.807432 | 5.07E-50 | -1.69E-46 |
| MS.gene054011 | MS.gene31266 | 0.811508 | 6.76E-51 | -1.69E-46 |
| MS.gene054012 | MS.gene31266 | 0.807896 | 4.04E-50 | -1.69E-46 |
| MS.gene054013 | MS.gene31266 | 0.806134 | 9.53E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene31266 | 0.856175 | 3.84E-62 | -1.69E-46 |
| MS.gene054183 | MS.gene31266 | 0.826124 | 3.22E-54 | -1.69E-46 |
| MS.gene054349 | MS.gene31266 | 0.875066 | 4.13E-68 | -1.69E-46 |
| MS.gene054556 | MS.gene31266 | 0.801356 | 9.36E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene31266 | 0.845993 | 2.87E-59 | -1.69E-46 |
| MS.gene05505 | MS.gene31266 | 0.816503 | 5.35E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene31266 | 0.882567 | 9.35E-71 | -1.69E-46 |
| MS.gene055277 | MS.gene31266 | 0.85872 | 6.79E-63 | -1.69E-46 |
| MS.gene055390 | MS.gene31266 | 0.806044 | 9.96E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene31266 | 0.811107 | 8.26E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene31266 | 0.857078 | 2.09E-62 | -1.69E-46 |
| MS.gene055428 | MS.gene31266 | 0.823083 | 1.68E-53 | -1.69E-46 |
| MS.gene05553 | MS.gene31266 | 0.829123 | 6.14E-55 | -1.69E-46 |
| MS.gene055604 | MS.gene31266 | 0.837092 | 6.37E-57 | -1.69E-46 |
| MS.gene055666 | MS.gene31266 | 0.807941 | 3.95E-50 | -1.69E-46 |
| MS.gene055909 | MS.gene31266 | 0.803762 | 2.99E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene31266 | 0.808713 | 2.71E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene31266 | 0.858361 | 8.68E-63 | -1.69E-46 |
| MS.gene056233 | MS.gene31266 | 0.820631 | 6.19E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene31266 | 0.826697 | 2.35E-54 | -1.69E-46 |
| MS.gene056410 | MS.gene31266 | 0.809753 | 1.62E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene31266 | 0.816974 | 4.19E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene31266 | 0.871837 | 5.04E-67 | -1.69E-46 |
| MS.gene056609 | MS.gene31266 | 0.871172 | 8.36E-67 | -1.69E-46 |
| MS.gene056612 | MS.gene31266 | 0.832156 | 1.11E-55 | -1.69E-46 |
| MS.gene056659 | MS.gene31266 | 0.847309 | 1.25E-59 | -1.69E-46 |
| MS.gene056719 | MS.gene31266 | 0.803547 | 3.31E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene31266 | 0.801812 | 7.54E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene31266 | -0.83196 | 1.24E-55 | -1.69E-46 |
| MS.gene056979 | MS.gene31266 | 0.800649 | 1.31E-48 | -1.69E-46 |
| MS.gene05702 | MS.gene31266 | 0.861109 | 1.29E-63 | -1.69E-46 |
| MS.gene057123 | MS.gene31266 | 0.809629 | 1.72E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene31266 | 0.842783 | 2.09E-58 | -1.69E-46 |
| MS.gene057146 | MS.gene31266 | 0.814988 | 1.16E-51 | -1.69E-46 |
| MS.gene05733 | MS.gene31266 | 0.811973 | 5.35E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene31266 | 0.851159 | 1.06E-60 | -1.69E-46 |
| MS.gene057448 | MS.gene31266 | 0.860844 | 1.56E-63 | -1.69E-46 |
| MS.gene057449 | MS.gene31266 | 0.865939 | 4.10E-65 | -1.69E-46 |
| MS.gene057450 | MS.gene31266 | 0.85648 | 3.13E-62 | -1.69E-46 |
| MS.gene057537 | MS.gene31266 | 0.841614 | 4.27E-58 | -1.69E-46 |
| MS.gene057749 | MS.gene31266 | 0.875136 | 3.91E-68 | -1.69E-46 |
| MS.gene057779 | MS.gene31266 | 0.81825 | 2.16E-52 | -1.69E-46 |
| MS.gene057782 | MS.gene31266 | 0.813423 | 2.58E-51 | -1.69E-46 |
| MS.gene057796 | MS.gene31266 | 0.838144 | 3.42E-57 | -1.69E-46 |
| MS.gene057823 | MS.gene31266 | 0.867569 | 1.24E-65 | -1.69E-46 |
| MS.gene057825 | MS.gene31266 | 0.834966 | 2.21E-56 | -1.69E-46 |
| MS.gene057927 | MS.gene31266 | 0.818268 | 2.14E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene31266 | 0.864201 | 1.44E-64 | -1.69E-46 |
| MS.gene058007 | MS.gene31266 | 0.840781 | 7.07E-58 | -1.69E-46 |
| MS.gene058082 | MS.gene31266 | 0.804279 | 2.33E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene31266 | 0.844144 | 9.07E-59 | -1.69E-46 |
| MS.gene058142 | MS.gene31266 | 0.829414 | 5.22E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene31266 | -0.829301 | 5.56E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene31266 | 0.805176 | 1.51E-49 | -1.69E-46 |
| MS.gene058365 | MS.gene31266 | 0.817373 | 3.41E-52 | -1.69E-46 |
| MS.gene058376 | MS.gene31266 | 0.806595 | 7.62E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene31266 | 0.858198 | 9.71E-63 | -1.69E-46 |
| MS.gene058710 | MS.gene31266 | 0.810807 | 9.59E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene31266 | 0.828309 | 9.66E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene31266 | 0.993308 | 7.62E-199 | -1.69E-46 |
| MS.gene058949 | MS.gene31266 | 0.813256 | 2.81E-51 | -1.69E-46 |
| MS.gene058995 | MS.gene31266 | 0.808077 | 3.70E-50 | -1.69E-46 |
| MS.gene059043 | MS.gene31266 | -0.80094 | 1.14E-48 | -1.69E-46 |
| MS.gene05907 | MS.gene31266 | 0.866367 | 3.00E-65 | -1.69E-46 |
| MS.gene059141 | MS.gene31266 | 0.825672 | 4.13E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene31266 | 0.875827 | 2.27E-68 | -1.69E-46 |
| MS.gene059294 | MS.gene31266 | 0.872905 | 2.22E-67 | -1.69E-46 |
| MS.gene059366 | MS.gene31266 | 0.88562 | 6.95E-72 | -1.69E-46 |
| MS.gene059420 | MS.gene31266 | 0.856846 | 2.44E-62 | -1.69E-46 |
| MS.gene059518 | MS.gene31266 | 0.820065 | 8.35E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene31266 | 0.825448 | 4.66E-54 | -1.69E-46 |
| MS.gene059597 | MS.gene31266 | 0.887483 | 1.37E-72 | -1.69E-46 |
| MS.gene05959 | MS.gene31266 | 0.81152 | 6.72E-51 | -1.69E-46 |
| MS.gene059674 | MS.gene31266 | 0.844634 | 6.70E-59 | -1.69E-46 |
| MS.gene059676 | MS.gene31266 | 0.860732 | 1.68E-63 | -1.69E-46 |
| MS.gene059688 | MS.gene31266 | 0.885657 | 6.73E-72 | -1.69E-46 |
| MS.gene059692 | MS.gene31266 | 0.878427 | 2.83E-69 | -1.69E-46 |
| MS.gene059695 | MS.gene31266 | 0.879791 | 9.33E-70 | -1.69E-46 |
| MS.gene059708 | MS.gene31266 | 0.816948 | 4.25E-52 | -1.69E-46 |
| MS.gene059711 | MS.gene31266 | 0.842604 | 2.34E-58 | -1.69E-46 |
| MS.gene059807 | MS.gene31266 | 0.887558 | 1.28E-72 | -1.69E-46 |
| MS.gene05984 | MS.gene31266 | 0.870625 | 1.27E-66 | -1.69E-46 |
| MS.gene059894 | MS.gene31266 | 0.87543 | 3.10E-68 | -1.69E-46 |
| MS.gene059974 | MS.gene31266 | 0.825523 | 4.48E-54 | -1.69E-46 |
| MS.gene060005 | MS.gene31266 | 0.80341 | 3.53E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene31266 | 0.835591 | 1.53E-56 | -1.69E-46 |
| MS.gene06037 | MS.gene31266 | 0.831716 | 1.43E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene31266 | 0.84233 | 2.76E-58 | -1.69E-46 |
| MS.gene060407 | MS.gene31266 | 0.829055 | 6.37E-55 | -1.69E-46 |
| MS.gene060495 | MS.gene31266 | 0.845559 | 3.77E-59 | -1.69E-46 |
| MS.gene060496 | MS.gene31266 | 0.81075 | 9.87E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene31266 | 0.825572 | 4.36E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene31266 | 0.840829 | 6.87E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene31266 | 0.831213 | 1.90E-55 | -1.69E-46 |
| MS.gene060986 | MS.gene31266 | 0.816578 | 5.14E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene31266 | 0.847759 | 9.44E-60 | -1.69E-46 |
| MS.gene061049 | MS.gene31266 | 0.885686 | 6.57E-72 | -1.69E-46 |
| MS.gene061051 | MS.gene31266 | -0.869667 | 2.61E-66 | -1.69E-46 |
| MS.gene061154 | MS.gene31266 | 0.844584 | 6.91E-59 | -1.69E-46 |
| MS.gene061159 | MS.gene31266 | 0.859381 | 4.30E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31266 | MS.gene016180 | PPI |
| MS.gene31266 | MS.gene007521 | PPI |
| MS.gene31266 | MS.gene007426 | PPI |
| MS.gene31266 | MS.gene33028 | PPI |
| MS.gene31266 | MS.gene52386 | PPI |
| MS.gene31266 | MS.gene051577 | PPI |
| MS.gene31266 | MS.gene20068 | PPI |
| MS.gene31266 | MS.gene055648 | PPI |
| MS.gene31266 | MS.gene029824 | PPI |
| MS.gene31266 | MS.gene016181 | PPI |
| MS.gene31266 | MS.gene034799 | PPI |
| MS.gene31266 | MS.gene24610 | PPI |
| MS.gene31266 | MS.gene41079 | PPI |
| MS.gene31266 | MS.gene22428 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31266.t1 | MTR_2g094790 | 98.565 | 209 | 3 | 0 | 1 | 209 | 1 | 209 | 2.90e-155 | 428 |
| MS.gene31266.t1 | MTR_7g101290 | 87.317 | 205 | 26 | 0 | 3 | 207 | 4 | 208 | 1.28e-133 | 374 |
| MS.gene31266.t1 | MTR_0041s0100 | 87.317 | 205 | 26 | 0 | 3 | 207 | 4 | 208 | 1.28e-133 | 374 |
| MS.gene31266.t1 | MTR_1g064260 | 85.990 | 207 | 29 | 0 | 1 | 207 | 1 | 207 | 1.47e-133 | 374 |
| MS.gene31266.t1 | MTR_4g058740 | 89.899 | 198 | 20 | 0 | 12 | 209 | 12 | 209 | 1.54e-132 | 370 |
| MS.gene31266.t1 | MTR_3g113710 | 76.329 | 207 | 49 | 0 | 1 | 207 | 3 | 209 | 3.41e-119 | 337 |
| MS.gene31266.t1 | MTR_1g057020 | 76.410 | 195 | 46 | 0 | 10 | 204 | 6 | 200 | 4.02e-114 | 324 |
| MS.gene31266.t1 | MTR_3g113710 | 76.440 | 191 | 45 | 0 | 1 | 191 | 3 | 193 | 2.23e-109 | 313 |
| MS.gene31266.t1 | MTR_1g015830 | 69.192 | 198 | 61 | 0 | 11 | 208 | 7 | 204 | 3.81e-103 | 296 |
| MS.gene31266.t1 | MTR_1g064260 | 88.079 | 151 | 18 | 0 | 57 | 207 | 1 | 151 | 1.77e-96 | 278 |
| MS.gene31266.t1 | MTR_3g113710 | 79.104 | 134 | 28 | 0 | 74 | 207 | 10 | 143 | 3.29e-76 | 226 |
| MS.gene31266.t1 | MTR_1g015830 | 68.421 | 152 | 48 | 0 | 57 | 208 | 1 | 152 | 7.14e-75 | 223 |
| MS.gene31266.t1 | MTR_1g024145 | 73.786 | 103 | 27 | 0 | 28 | 130 | 150 | 252 | 1.17e-48 | 159 |
| MS.gene31266.t1 | MTR_1g024850 | 75.714 | 70 | 17 | 0 | 10 | 79 | 14 | 83 | 1.43e-33 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31266.t1 | AT2G28305 | 88.945 | 199 | 22 | 0 | 10 | 208 | 5 | 203 | 1.42e-132 | 371 |
| MS.gene31266.t1 | AT2G37210 | 85.644 | 202 | 29 | 0 | 7 | 208 | 8 | 209 | 1.77e-130 | 366 |
| MS.gene31266.t1 | AT3G53450 | 84.236 | 203 | 32 | 0 | 7 | 209 | 8 | 210 | 1.54e-127 | 358 |
| MS.gene31266.t1 | AT2G37210 | 76.106 | 226 | 30 | 1 | 7 | 208 | 8 | 233 | 1.36e-124 | 352 |
| MS.gene31266.t1 | AT2G28305 | 90.659 | 182 | 17 | 0 | 10 | 191 | 5 | 186 | 5.94e-122 | 343 |
| MS.gene31266.t1 | AT5G06300 | 79.000 | 200 | 42 | 0 | 5 | 204 | 1 | 200 | 6.54e-118 | 334 |
| MS.gene31266.t1 | AT5G03270 | 82.796 | 186 | 32 | 0 | 10 | 195 | 16 | 201 | 2.89e-113 | 322 |
| MS.gene31266.t1 | AT2G35990 | 71.144 | 201 | 58 | 0 | 5 | 205 | 1 | 201 | 1.67e-110 | 315 |
| MS.gene31266.t1 | AT5G03270 | 82.873 | 181 | 31 | 0 | 10 | 190 | 16 | 196 | 4.94e-109 | 311 |
| MS.gene31266.t1 | AT4G35190 | 69.458 | 203 | 62 | 0 | 5 | 207 | 1 | 203 | 2.80e-105 | 303 |
| MS.gene31266.t1 | AT5G11950 | 68.342 | 199 | 63 | 0 | 10 | 208 | 7 | 205 | 1.95e-101 | 292 |
| MS.gene31266.t1 | AT5G11950 | 68.342 | 199 | 63 | 0 | 10 | 208 | 7 | 205 | 1.95e-101 | 292 |
| MS.gene31266.t1 | AT5G11950 | 68.342 | 199 | 63 | 0 | 10 | 208 | 7 | 205 | 1.95e-101 | 292 |
| MS.gene31266.t1 | AT4G35190 | 70.103 | 194 | 56 | 1 | 5 | 198 | 1 | 192 | 1.20e-100 | 290 |
| MS.gene31266.t1 | AT2G28305 | 92.593 | 135 | 10 | 0 | 10 | 144 | 5 | 139 | 6.89e-89 | 258 |
| MS.gene31266.t1 | AT2G35990 | 71.812 | 149 | 42 | 0 | 57 | 205 | 1 | 149 | 6.65e-80 | 236 |
| MS.gene31266.t1 | AT2G35990 | 71.812 | 149 | 42 | 0 | 57 | 205 | 1 | 149 | 6.65e-80 | 236 |
| MS.gene31266.t1 | AT5G11950 | 68.421 | 152 | 48 | 0 | 57 | 208 | 1 | 152 | 3.42e-74 | 221 |
| MS.gene31266.t1 | AT5G26140 | 53.061 | 147 | 47 | 1 | 84 | 208 | 6 | 152 | 2.41e-45 | 148 |
| MS.gene31266.t1 | AT5G26140 | 51.880 | 133 | 42 | 1 | 98 | 208 | 1 | 133 | 5.40e-38 | 129 |
| MS.gene31266.t1 | AT5G26140 | 56.863 | 102 | 44 | 0 | 107 | 208 | 17 | 118 | 1.91e-34 | 119 |
Find 47 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAATATTGATCTAGTTTA+TGG | 0.105402 | 2.4:+7652352 | MS.gene31266:CDS |
| CTCTCTTGGCATTAGTGTTT+TGG | 0.116726 | 2.4:-7652623 | None:intergenic |
| GATGGTGGTCGACATGTAAT+TGG | 0.286287 | 2.4:+7652421 | MS.gene31266:CDS |
| GTATATATGCTGCAGCTTAC+TGG | 0.317998 | 2.4:+7653691 | MS.gene31266:intron |
| CCAACCTGGTAAGGCTATAA+AGG | 0.339119 | 2.4:-7653788 | None:intergenic |
| TATTGAACTTGGAAAAGAAT+TGG | 0.373481 | 2.4:+7651949 | MS.gene31266:CDS |
| AGGAGGCAGCATTGGTTTGA+TGG | 0.380464 | 2.4:+7652375 | MS.gene31266:CDS |
| TGGTAACAAAACTAGCTATA+AGG | 0.381980 | 2.4:+7651919 | MS.gene31266:CDS |
| GGAGGCAGCATTGGTTTGAT+GGG | 0.391809 | 2.4:+7652376 | MS.gene31266:CDS |
| GCATCAAAGGAAAGCTGAAA+TGG | 0.434148 | 2.4:+7653750 | MS.gene31266:CDS |
| TATTTGCATGAAGGTGGGTA+TGG | 0.435005 | 2.4:+7658582 | MS.gene31266:intron |
| GAGTTGCCTCCAAGCTAAGC+TGG | 0.437628 | 2.4:+7659210 | MS.gene31266:CDS |
| TTTGTCGATGAAAGTCAAAA+AGG | 0.444110 | 2.4:-7658805 | None:intergenic |
| AAATCTTTACCGGTTTATCA+TGG | 0.448590 | 2.4:-7658653 | None:intergenic |
| CAACATAACCTTACCTCTCT+TGG | 0.453244 | 2.4:-7652637 | None:intergenic |
| GTGGGATTGCTGAATGTTGA+TGG | 0.455471 | 2.4:+7658771 | MS.gene31266:CDS |
| AAGGATGCTGCTATTGAACT+TGG | 0.459571 | 2.4:+7651938 | MS.gene31266:CDS |
| ATTTCTCAAGCTGTTTATGA+TGG | 0.472010 | 2.4:+7652403 | MS.gene31266:CDS |
| ACAATAATATGGCGAGCTGT+GGG | 0.481841 | 2.4:-7658852 | None:intergenic |
| TTGGTGCAGACACAATAATA+TGG | 0.486535 | 2.4:-7658863 | None:intergenic |
| TTGTTTGTACCAACCTGGTA+AGG | 0.495823 | 2.4:-7653797 | None:intergenic |
| GTTTATGGAGGAGGCAGCAT+TGG | 0.498113 | 2.4:+7652367 | MS.gene31266:CDS |
| CACAATAATATGGCGAGCTG+TGG | 0.500721 | 2.4:-7658853 | None:intergenic |
| ACTTGGCATCCATGATAAAC+CGG | 0.501203 | 2.4:+7658644 | MS.gene31266:CDS |
| GATGCCTTTATAGCCTTACC+AGG | 0.517415 | 2.4:+7653784 | MS.gene31266:CDS |
| TCTCAAGCTGTTTATGATGG+TGG | 0.519302 | 2.4:+7652406 | MS.gene31266:CDS |
| ATTGATCTAGTTTATGGAGG+AGG | 0.523752 | 2.4:+7652358 | MS.gene31266:CDS |
| AGGCAACTCTTTCATGCTGT+GGG | 0.528340 | 2.4:-7659196 | None:intergenic |
| GTGATAACATGGGCTCAACT+TGG | 0.532726 | 2.4:+7658627 | MS.gene31266:CDS |
| CAGTAGCTGACATGCATCAA+AGG | 0.536960 | 2.4:+7653737 | MS.gene31266:CDS |
| GAGGCAGCATTGGTTTGATG+GGG | 0.537940 | 2.4:+7652377 | MS.gene31266:CDS |
| ATCGACAAAGCTGTGGAGGA+AGG | 0.545903 | 2.4:+7658819 | MS.gene31266:CDS |
| GAGGCAACTCTTTCATGCTG+TGG | 0.549574 | 2.4:-7659197 | None:intergenic |
| ATTTGCATGAAGGTGGGTAT+GGG | 0.550161 | 2.4:+7658583 | MS.gene31266:intron |
| GACTTTCATCGACAAAGCTG+TGG | 0.562460 | 2.4:+7658812 | MS.gene31266:CDS |
| AGCTCCTTGAGGTGATAACA+TGG | 0.564557 | 2.4:+7658616 | MS.gene31266:CDS |
| CAGCTTACTGGTGAAACAGT+AGG | 0.570843 | 2.4:+7653703 | MS.gene31266:intron |
| ATGGTGGTCGACATGTAATT+GGG | 0.573816 | 2.4:+7652422 | MS.gene31266:CDS |
| AATATTGATCTAGTTTATGG+AGG | 0.578824 | 2.4:+7652355 | MS.gene31266:CDS |
| AGTTGCCTCCAAGCTAAGCT+GGG | 0.587565 | 2.4:+7659211 | MS.gene31266:CDS |
| GAGCCCATGTTATCACCTCA+AGG | 0.614099 | 2.4:-7658620 | None:intergenic |
| TTTCATCGACAAAGCTGTGG+AGG | 0.624003 | 2.4:+7658815 | MS.gene31266:CDS |
| CAAAACACTAATGCCAAGAG+AGG | 0.626831 | 2.4:+7652624 | MS.gene31266:CDS |
| GACACTTGAGGAGCTCCTTG+AGG | 0.631827 | 2.4:+7658605 | MS.gene31266:CDS |
| AGGTGGGTATGGGACACTTG+AGG | 0.655697 | 2.4:+7658593 | MS.gene31266:intron |
| CAATAATATGGCGAGCTGTG+GGG | 0.681355 | 2.4:-7658851 | None:intergenic |
| GCTCCTTGAGGTGATAACAT+GGG | 0.684486 | 2.4:+7658617 | MS.gene31266:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 7651851 | 7659253 | 7651851 | ID=MS.gene31266 |
| chr2.4 | mRNA | 7651851 | 7659253 | 7651851 | ID=MS.gene31266.t1;Parent=MS.gene31266 |
| chr2.4 | exon | 7651851 | 7651970 | 7651851 | ID=MS.gene31266.t1.exon1;Parent=MS.gene31266.t1 |
| chr2.4 | CDS | 7651851 | 7651970 | 7651851 | ID=cds.MS.gene31266.t1;Parent=MS.gene31266.t1 |
| chr2.4 | exon | 7652346 | 7652443 | 7652346 | ID=MS.gene31266.t1.exon2;Parent=MS.gene31266.t1 |
| chr2.4 | CDS | 7652346 | 7652443 | 7652346 | ID=cds.MS.gene31266.t1;Parent=MS.gene31266.t1 |
| chr2.4 | exon | 7652615 | 7652645 | 7652615 | ID=MS.gene31266.t1.exon3;Parent=MS.gene31266.t1 |
| chr2.4 | CDS | 7652615 | 7652645 | 7652615 | ID=cds.MS.gene31266.t1;Parent=MS.gene31266.t1 |
| chr2.4 | exon | 7653706 | 7653805 | 7653706 | ID=MS.gene31266.t1.exon4;Parent=MS.gene31266.t1 |
| chr2.4 | CDS | 7653706 | 7653805 | 7653706 | ID=cds.MS.gene31266.t1;Parent=MS.gene31266.t1 |
| chr2.4 | exon | 7658595 | 7658665 | 7658595 | ID=MS.gene31266.t1.exon5;Parent=MS.gene31266.t1 |
| chr2.4 | CDS | 7658595 | 7658665 | 7658595 | ID=cds.MS.gene31266.t1;Parent=MS.gene31266.t1 |
| chr2.4 | exon | 7658771 | 7658914 | 7658771 | ID=MS.gene31266.t1.exon6;Parent=MS.gene31266.t1 |
| chr2.4 | CDS | 7658771 | 7658914 | 7658771 | ID=cds.MS.gene31266.t1;Parent=MS.gene31266.t1 |
| chr2.4 | exon | 7659188 | 7659253 | 7659188 | ID=MS.gene31266.t1.exon7;Parent=MS.gene31266.t1 |
| chr2.4 | CDS | 7659188 | 7659253 | 7659188 | ID=cds.MS.gene31266.t1;Parent=MS.gene31266.t1 |
| Gene Sequence |
| Protein sequence |
