Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43470.t1 | XP_013458703.1 | 96.2 | 551 | 15 | 3 | 1 | 551 | 1 | 545 | 9.50E-291 | 1008.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43470.t1 | A7HYV8 | 38.8 | 479 | 263 | 10 | 41 | 512 | 5 | 460 | 1.6e-81 | 305.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43470.t1 | A0A072V3J6 | 96.2 | 551 | 15 | 3 | 1 | 551 | 1 | 545 | 6.8e-291 | 1008.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070505 | MS.gene43470 | PPI |
| MS.gene43470 | MS.gene67840 | PPI |
| MS.gene057886 | MS.gene43470 | PPI |
| MS.gene43470 | MS.gene37911 | PPI |
| MS.gene81615 | MS.gene43470 | PPI |
| MS.gene81622 | MS.gene43470 | PPI |
| MS.gene43470 | MS.gene81620 | PPI |
| MS.gene43470 | MS.gene81617 | PPI |
| MS.gene016743 | MS.gene43470 | PPI |
| MS.gene016742 | MS.gene43470 | PPI |
| MS.gene43470 | MS.gene070503 | PPI |
| MS.gene43470 | MS.gene070507 | PPI |
| MS.gene43470 | MS.gene057883 | PPI |
| MS.gene43470 | MS.gene016758 | PPI |
| MS.gene43470 | MS.gene070492 | PPI |
| MS.gene070509 | MS.gene43470 | PPI |
| MS.gene43470 | MS.gene070510 | PPI |
| MS.gene43470 | MS.gene070511 | PPI |
| MS.gene43470 | MS.gene057884 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43470.t1 | MTR_4g134500 | 96.189 | 551 | 15 | 3 | 1 | 551 | 1 | 545 | 0.0 | 1068 |
| MS.gene43470.t1 | MTR_4g065030 | 31.627 | 547 | 295 | 15 | 22 | 528 | 119 | 626 | 5.23e-62 | 216 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43470.t1 | AT5G39960 | 70.155 | 516 | 147 | 3 | 28 | 541 | 107 | 617 | 0.0 | 729 |
| MS.gene43470.t1 | AT3G12080 | 31.061 | 528 | 294 | 16 | 38 | 530 | 158 | 650 | 9.67e-55 | 196 |
| MS.gene43470.t1 | AT3G12080 | 30.649 | 447 | 242 | 15 | 38 | 451 | 158 | 569 | 1.14e-39 | 152 |
Find 139 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGCCAGAGTGGCTTTA+AGG | 0.168813 | 8.4:+338325 | MS.gene43470:CDS |
| TCACCTGCGTTTCAGAGTTT+TGG | 0.258946 | 8.4:+334028 | MS.gene43470:CDS |
| GAACGCTGCATGATCCTTAT+AGG | 0.273393 | 8.4:-338258 | None:intergenic |
| TTGGAAGCTGAAGCCACTTC+TGG | 0.280926 | 8.4:+334062 | MS.gene43470:CDS |
| CTTGAAAGATGACTTTGATT+TGG | 0.289666 | 8.4:+338227 | MS.gene43470:CDS |
| TCAAGGAAGAACTATTTATC+TGG | 0.295908 | 8.4:+334740 | MS.gene43470:CDS |
| CTAATGAAATGTCCCGTTTA+GGG | 0.297260 | 8.4:+334300 | MS.gene43470:CDS |
| GTGAGGAAGAGTAAGGAATT+AGG | 0.310025 | 8.4:-334137 | None:intergenic |
| GCTAATGAAATGTCCCGTTT+AGG | 0.315515 | 8.4:+334299 | MS.gene43470:CDS |
| GAATCACTCTTTGATGTTGA+TGG | 0.322033 | 8.4:+334260 | MS.gene43470:CDS |
| TGAACAAGATGGATCTTCTA+AGG | 0.322228 | 8.4:+337460 | MS.gene43470:CDS |
| CTCCCCACCGTCATCATTCT+CGG | 0.325989 | 8.4:+333882 | MS.gene43470:CDS |
| TTGATCAGGAAGTTGGAAAA+TGG | 0.328408 | 8.4:+334186 | MS.gene43470:CDS |
| ATTTGGGTGGAATTCCTATA+AGG | 0.329672 | 8.4:+338244 | MS.gene43470:CDS |
| CAGTGAAAGAAGCAGTTCTA+TGG | 0.344662 | 8.4:-334094 | None:intergenic |
| GAAATGTCCCGTTTAGGGTT+TGG | 0.350058 | 8.4:+334305 | MS.gene43470:CDS |
| AGTTTGCTTTCGTCCGCCTC+AGG | 0.352890 | 8.4:-334579 | None:intergenic |
| CGTGAAGGAGTCGCTAAATT+AGG | 0.361035 | 8.4:+334005 | MS.gene43470:CDS |
| AATGAATACTACTGGGATTC+CGG | 0.364626 | 8.4:-337856 | None:intergenic |
| AAGGTTGATTTACCAACATT+GGG | 0.373746 | 8.4:-334630 | None:intergenic |
| TTGAAAGATGACTTTGATTT+GGG | 0.374915 | 8.4:+338228 | MS.gene43470:CDS |
| TCCCTCTTCCACGGCTCGTC+TGG | 0.378815 | 8.4:-337418 | None:intergenic |
| AGAACTCAGTTTGAATTTCA+AGG | 0.382260 | 8.4:+334723 | MS.gene43470:CDS |
| TGAGTAAAATACTTGATCTT+AGG | 0.382571 | 8.4:-338117 | None:intergenic |
| GATTTATTCATGACAAGAAT+AGG | 0.383461 | 8.4:-334236 | None:intergenic |
| AGGTTATGAGCAGACATTCT+TGG | 0.386318 | 8.4:+338076 | MS.gene43470:intron |
| TCTCTTGTGAGACCAGCTTC+AGG | 0.388690 | 8.4:-334693 | None:intergenic |
| AAGTCTGACAAGAGAGATAA+AGG | 0.391419 | 8.4:+338351 | MS.gene43470:CDS |
| CAAATCAAAGTCATCTTTCA+AGG | 0.392302 | 8.4:-338226 | None:intergenic |
| CTTAAAGCCACTCTGGCAAT+TGG | 0.399226 | 8.4:-338324 | None:intergenic |
| TAGGATCTCCAAACCCTAAA+CGG | 0.401392 | 8.4:-334313 | None:intergenic |
| TCTCTCACTTCAACCTGTCT+TGG | 0.401534 | 8.4:+334379 | MS.gene43470:CDS |
| CCATTGCAGCTAGCAATTGT+AGG | 0.408259 | 8.4:+334603 | MS.gene43470:CDS |
| AATGCTGAAATGAATACTAC+TGG | 0.415349 | 8.4:-337864 | None:intergenic |
| CATCCTCTTGATCAGGAAGT+TGG | 0.417118 | 8.4:+334179 | MS.gene43470:CDS |
| AGCATCCTATGAGCAGATTC+TGG | 0.417507 | 8.4:+337497 | MS.gene43470:CDS |
| CAAGGTTGATTTACCAACAT+TGG | 0.421515 | 8.4:-334631 | None:intergenic |
| TGATCTTAGGCTGTGCTGCC+TGG | 0.423296 | 8.4:-338104 | None:intergenic |
| CCGGGCTCATATAATTGCTT+TGG | 0.431654 | 8.4:+336805 | MS.gene43470:CDS |
| AGTAGTATTCATTTCAGCAT+TGG | 0.432720 | 8.4:+337866 | MS.gene43470:CDS |
| GCCATTCAGGTTGATACTGC+TGG | 0.434612 | 8.4:+336710 | MS.gene43470:intron |
| GTTCTTGTGGGTCCTGAAGC+TGG | 0.440861 | 8.4:+334681 | MS.gene43470:CDS |
| CAAGAAGATCGTGTTCTTGT+GGG | 0.446477 | 8.4:+334669 | MS.gene43470:CDS |
| GTTTGCTTTCGTCCGCCTCA+GGG | 0.447804 | 8.4:-334578 | None:intergenic |
| TGGTCTTCATCCTCTTGATC+AGG | 0.449625 | 8.4:+334172 | MS.gene43470:CDS |
| TTGGTTGCAGAGGACAAAAC+TGG | 0.450758 | 8.4:+336733 | MS.gene43470:CDS |
| CCGTACAACCGTCTTGCATC+AGG | 0.450788 | 8.4:+337899 | MS.gene43470:CDS |
| TCTTAACCGTTGGTTGCAAA+AGG | 0.460544 | 8.4:+337968 | MS.gene43470:CDS |
| ACATTTGTTGCGTTTGTGCA+CGG | 0.466428 | 8.4:+338159 | MS.gene43470:CDS |
| AGGATCTCCAAACCCTAAAC+GGG | 0.466503 | 8.4:-334312 | None:intergenic |
| GTCTCAGCAGATATAGCAAT+AGG | 0.469147 | 8.4:-334332 | None:intergenic |
| CCACCAGAAAAGGAATAGAT+TGG | 0.471568 | 8.4:-333781 | None:intergenic |
| AATCCAGACAATTATACCTC+AGG | 0.474181 | 8.4:+337536 | MS.gene43470:CDS |
| CCTTGAGCATTATGCAATCA+AGG | 0.475161 | 8.4:+336771 | MS.gene43470:CDS |
| AGTGCAGATTTGCCGACGTT+AGG | 0.476830 | 8.4:-333909 | None:intergenic |
| CATTTCAGCATTGGAGGGAA+GGG | 0.480874 | 8.4:+337875 | MS.gene43470:CDS |
| ACCTCTACTGAAGGTGCGGC+GGG | 0.489201 | 8.4:-333805 | None:intergenic |
| AAACCTGAGGTATAATTGTC+TGG | 0.489998 | 8.4:-337539 | None:intergenic |
| AGCCTCCAGAATCTGCTCAT+AGG | 0.491278 | 8.4:-337502 | None:intergenic |
| AGAAGCAGTTCTATGGAGAA+TGG | 0.491490 | 8.4:-334087 | None:intergenic |
| AGTATTCATTTCAGCATTGG+AGG | 0.499259 | 8.4:+337869 | MS.gene43470:CDS |
| AGCATATAGTTCTCCAAGAC+AGG | 0.503239 | 8.4:-334392 | None:intergenic |
| ATTGCTATATCTGCTGAGAC+TGG | 0.505080 | 8.4:+334335 | MS.gene43470:CDS |
| CCTACAATTGCTAGCTGCAA+TGG | 0.508566 | 8.4:-334603 | None:intergenic |
| TATATGCTCAGTGTCTTGAA+TGG | 0.509975 | 8.4:+334407 | MS.gene43470:CDS |
| ATCAAGGAAGAGTCTACTCC+GGG | 0.510619 | 8.4:+336787 | MS.gene43470:CDS |
| AGGCGACTTGGTTGAATCAA+AGG | 0.512056 | 8.4:+338371 | MS.gene43470:CDS |
| TTTCCAACTTCCTGATCAAG+AGG | 0.514682 | 8.4:-334182 | None:intergenic |
| TGCGGCGGGTCCACCAGAAA+AGG | 0.516259 | 8.4:-333791 | None:intergenic |
| CTACAGCTCGTCTTAACCGT+TGG | 0.516393 | 8.4:+337958 | MS.gene43470:CDS |
| ATATCTGCTGAGACTGGACT+TGG | 0.518744 | 8.4:+334341 | MS.gene43470:CDS |
| AGCCAGACGAGCCGTGGAAG+AGG | 0.523102 | 8.4:+337416 | MS.gene43470:CDS |
| CATTTGTTGCGTTTGTGCAC+GGG | 0.523246 | 8.4:+338160 | MS.gene43470:CDS |
| TCATTTCAGCATTGGAGGGA+AGG | 0.523663 | 8.4:+337874 | MS.gene43470:CDS |
| AAAGATGACTTTGATTTGGG+TGG | 0.523787 | 8.4:+338231 | MS.gene43470:CDS |
| GTCGCGGGTGACATGATCGT+CGG | 0.527824 | 8.4:-333979 | None:intergenic |
| AGTTATAGCCAGACGAGCCG+TGG | 0.527937 | 8.4:+337410 | MS.gene43470:CDS |
| AGCATCAGTGAGGAAGAGTA+AGG | 0.529884 | 8.4:-334144 | None:intergenic |
| CTTAATCCTTAAAGCCACTC+TGG | 0.530160 | 8.4:-338331 | None:intergenic |
| TCGCGGGTGACATGATCGTC+GGG | 0.530196 | 8.4:-333978 | None:intergenic |
| TTCCTCACTGATGCTAGAGC+TGG | 0.533462 | 8.4:+334152 | MS.gene43470:CDS |
| CAAGAGAGATAAAGGCGACT+TGG | 0.533482 | 8.4:+338359 | MS.gene43470:CDS |
| ATTTCAGCATTGGAGGGAAG+GGG | 0.533760 | 8.4:+337876 | MS.gene43470:CDS |
| CCTTGATTGCATAATGCTCA+AGG | 0.534896 | 8.4:-336771 | None:intergenic |
| GCAAGAAGATCGTGTTCTTG+TGG | 0.536796 | 8.4:+334668 | MS.gene43470:CDS |
| ATTGTAGGACGCCCCAATGT+TGG | 0.540370 | 8.4:+334618 | MS.gene43470:CDS |
| GCCAGACGAGCCGTGGAAGA+GGG | 0.542466 | 8.4:+337417 | MS.gene43470:CDS |
| GACTCCTTCACGAATGTCGC+GGG | 0.544485 | 8.4:-333994 | None:intergenic |
| TACTAAGAAGAACAACAAGT+TGG | 0.545516 | 8.4:+333833 | MS.gene43470:CDS |
| CGGCCGAGAATGATGACGGT+GGG | 0.550366 | 8.4:-333885 | None:intergenic |
| CCAAAGCAATTATATGAGCC+CGG | 0.555243 | 8.4:-336805 | None:intergenic |
| ATTGCTTTGGTACTAGATGC+CGG | 0.556355 | 8.4:+336818 | MS.gene43470:CDS |
| GAACAAGATGGATCTTCTAA+GGG | 0.556692 | 8.4:+337461 | MS.gene43470:CDS |
| ACCCGCCGCACCTTCAGTAG+AGG | 0.557052 | 8.4:+333804 | MS.gene43470:CDS |
| TTCAGGTTGATACTGCTGGT+TGG | 0.557730 | 8.4:+336714 | MS.gene43470:intron |
| GGAACTAGTCTCATCATCGC+AGG | 0.566444 | 8.4:-334556 | None:intergenic |
| AGTCCAAAACTCTGAAACGC+AGG | 0.567705 | 8.4:-334031 | None:intergenic |
| ATGGAGAATGGAACCAGAAG+TGG | 0.568402 | 8.4:-334075 | None:intergenic |
| TGTTGTGATTGTGAACAAGA+TGG | 0.568875 | 8.4:+337449 | MS.gene43470:CDS |
| CGAGCCGTGGAAGAGGGACG+TGG | 0.569833 | 8.4:+337423 | MS.gene43470:CDS |
| CCTGATGCAAGACGGTTGTA+CGG | 0.574718 | 8.4:-337899 | None:intergenic |
| AAGCCACTCTGGCAATTGGA+TGG | 0.576147 | 8.4:-338320 | None:intergenic |
| ATACTGCTGGTTGGTTGCAG+AGG | 0.577960 | 8.4:+336723 | MS.gene43470:CDS |
| AACCTCTACTGAAGGTGCGG+CGG | 0.578312 | 8.4:-333806 | None:intergenic |
| TCTATTGCTAAGAAAGATGC+TGG | 0.579545 | 8.4:+338279 | MS.gene43470:CDS |
| TTTGCTTTCGTCCGCCTCAG+GGG | 0.584054 | 8.4:-334577 | None:intergenic |
| CAGAGGACAAAACTGGAGAA+AGG | 0.588172 | 8.4:+336740 | MS.gene43470:CDS |
| TGCACAAACGCAACAAATGT+AGG | 0.589076 | 8.4:-338156 | None:intergenic |
| TTGCAACAATGTATTCAGCA+AGG | 0.591457 | 8.4:-334649 | None:intergenic |
| TTGCTAAGAAAGATGCTGGT+GGG | 0.592670 | 8.4:+338283 | MS.gene43470:CDS |
| CGACTCCTTCACGAATGTCG+CGG | 0.594219 | 8.4:-333995 | None:intergenic |
| CAGACATTCTTGGAAAGACC+AGG | 0.594703 | 8.4:+338086 | MS.gene43470:CDS |
| CAGATTTGCCGACGTTAGGT+CGG | 0.595065 | 8.4:-333905 | None:intergenic |
| GGCCGAGAATGATGACGGTG+GGG | 0.596616 | 8.4:-333884 | None:intergenic |
| CATTATAGATGAAAGTGCTA+AGG | 0.602590 | 8.4:+334527 | MS.gene43470:intron |
| AATCAAGGAAGAGTCTACTC+CGG | 0.602668 | 8.4:+336786 | MS.gene43470:CDS |
| GTATTCATTTCAGCATTGGA+GGG | 0.607640 | 8.4:+337870 | MS.gene43470:CDS |
| AGTACAGAAACCTCTACTGA+AGG | 0.618332 | 8.4:-333814 | None:intergenic |
| ATGCTGAAATGAATACTACT+GGG | 0.619348 | 8.4:-337863 | None:intergenic |
| TAGCCATCCAATTGCCAGAG+TGG | 0.626194 | 8.4:+338317 | MS.gene43470:CDS |
| AAGACCACGTCCCTCTTCCA+CGG | 0.628476 | 8.4:-337427 | None:intergenic |
| ACAAGAATAGGTTTAAGTAG+AGG | 0.634465 | 8.4:-334224 | None:intergenic |
| ATTGCTAAGAAAGATGCTGG+TGG | 0.635595 | 8.4:+338282 | MS.gene43470:CDS |
| TGAGACTAGTTCCCCTGAGG+CGG | 0.640091 | 8.4:+334566 | MS.gene43470:CDS |
| GTCACCCGCGACATTCGTGA+AGG | 0.642685 | 8.4:+333990 | MS.gene43470:CDS |
| ATATAAGCAGCATACCTCGC+CGG | 0.643834 | 8.4:-336837 | None:intergenic |
| AGGTCGGCCGAGAATGATGA+CGG | 0.645973 | 8.4:-333889 | None:intergenic |
| AGAAACCTCTACTGAAGGTG+CGG | 0.650291 | 8.4:-333809 | None:intergenic |
| AGGTTGATTTACCAACATTG+GGG | 0.651188 | 8.4:-334629 | None:intergenic |
| AGCTTTCTGATACAGACACC+AGG | 0.651325 | 8.4:+338190 | MS.gene43470:CDS |
| AACAAGATGGATCTTCTAAG+GGG | 0.653213 | 8.4:+337462 | MS.gene43470:CDS |
| ATCCTATGAGCAGATTCTGG+AGG | 0.674083 | 8.4:+337500 | MS.gene43470:CDS |
| TTTGGTACTAGATGCCGGCG+AGG | 0.691470 | 8.4:+336823 | MS.gene43470:CDS |
| ATCAATGACCTGATGCAAGA+CGG | 0.696129 | 8.4:-337907 | None:intergenic |
| TCGGCCGAGAATGATGACGG+TGG | 0.705355 | 8.4:-333886 | None:intergenic |
| GACCAGCTCTAGCATCAGTG+AGG | 0.711854 | 8.4:-334154 | None:intergenic |
| TGATGAGACTAGTTCCCCTG+AGG | 0.733960 | 8.4:+334563 | MS.gene43470:CDS |
| ATTCTCGGCCGACCTAACGT+CGG | 0.735722 | 8.4:+333897 | MS.gene43470:CDS |
| ACAAACGCAACAAATGTAGG+CGG | 0.770638 | 8.4:-338153 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAATAAATAAATAAA+AGG | - | chr8.4:334440-334459 | None:intergenic | 0.0% |
| !! | TAATAAATAAATAAATAAAA+GGG | - | chr8.4:334439-334458 | None:intergenic | 0.0% |
| !! | ATTTAATTGTCATATTAAAT+AGG | + | chr8.4:335200-335219 | MS.gene43470:intron | 10.0% |
| !! | TTTAATTGTCATATTAAATA+GGG | + | chr8.4:335201-335220 | MS.gene43470:intron | 10.0% |
| !!! | AAATATTTAATCTTGTTATA+AGG | + | chr8.4:337318-337337 | MS.gene43470:intron | 10.0% |
| !!! | ATAAATTTTAAAAATGTAAC+CGG | - | chr8.4:336679-336698 | None:intergenic | 10.0% |
| !! | AAAATTGAAAACTAATCATA+TGG | - | chr8.4:335727-335746 | None:intergenic | 15.0% |
| !! | AAATTGAAAACTAATCATAT+GGG | - | chr8.4:335726-335745 | None:intergenic | 15.0% |
| !! | ATGATATCTTGATATTATTA+TGG | + | chr8.4:335685-335704 | MS.gene43470:intron | 15.0% |
| !! | ATTATACACAATGTTTAAAA+TGG | + | chr8.4:337612-337631 | MS.gene43470:intron | 15.0% |
| !! | CTAAATAAATAAGAAATTTG+AGG | - | chr8.4:335814-335833 | None:intergenic | 15.0% |
| !! | TAAATTACAATACAAACAAT+GGG | - | chr8.4:337805-337824 | None:intergenic | 15.0% |
| !! | TAATGTTTATTGTTCTAATT+TGG | + | chr8.4:336932-336951 | MS.gene43470:intron | 15.0% |
| !! | TTCAAATCAAAATACTAATT+TGG | - | chr8.4:335176-335195 | None:intergenic | 15.0% |
| !!! | CTCAAATTTCTTATTTATTT+AGG | + | chr8.4:335812-335831 | MS.gene43470:intron | 15.0% |
| !!! | TGTTATAAGGTTTTTTTTAT+TGG | + | chr8.4:337331-337350 | MS.gene43470:intron | 15.0% |
| !! | AAAGTGTAAACCAAAAATTA+TGG | - | chr8.4:337165-337184 | None:intergenic | 20.0% |
| !! | AACATTTAATATTGAAACTC+CGG | + | chr8.4:336657-336676 | MS.gene43470:intron | 20.0% |
| !! | AAGTGTAAACCAAAAATTAT+GGG | - | chr8.4:337164-337183 | None:intergenic | 20.0% |
| !! | ATCATGTTAAAACACAAATT+TGG | - | chr8.4:337661-337680 | None:intergenic | 20.0% |
| !! | ATTATAGGATAGAAATAAAG+AGG | + | chr8.4:336033-336052 | MS.gene43470:intron | 20.0% |
| !! | GATATTATTATGGAATGTAT+TGG | + | chr8.4:335695-335714 | MS.gene43470:intron | 20.0% |
| !! | GGATCAATGTTATTAAATTA+CGG | + | chr8.4:336226-336245 | MS.gene43470:intron | 20.0% |
| !! | GTAAATTACAATACAAACAA+TGG | - | chr8.4:337806-337825 | None:intergenic | 20.0% |
| !! | TGTAATTTACTATTGAGTAT+TGG | + | chr8.4:337816-337835 | MS.gene43470:intron | 20.0% |
| !! | TTATAGGATAGAAATAAAGA+GGG | + | chr8.4:336034-336053 | MS.gene43470:intron | 20.0% |
| !! | TTCTATCCTATAATTTAACT+TGG | - | chr8.4:336027-336046 | None:intergenic | 20.0% |
| !!! | ATGGTACCATTTTTTAAAAA+TGG | + | chr8.4:337631-337650 | MS.gene43470:intron | 20.0% |
| !!! | ATTGATCACGTTTTTAATAA+AGG | - | chr8.4:337260-337279 | None:intergenic | 20.0% |
| !!! | TGATATAATTGATAATGACT+TGG | - | chr8.4:335888-335907 | None:intergenic | 20.0% |
| !!! | TTACTAGAACAATTACATTT+TGG | - | chr8.4:336998-337017 | None:intergenic | 20.0% |
| !!! | TTGATCACGTTTTTAATAAA+GGG | - | chr8.4:337259-337278 | None:intergenic | 20.0% |
| !!! | TTTGAATCTACTAAGATTTT+TGG | + | chr8.4:337038-337057 | MS.gene43470:intron | 20.0% |
| ! | AACTACTTCAATTACAACTT+TGG | + | chr8.4:337995-338014 | MS.gene43470:intron | 25.0% |
| ! | ACAACATAACTTCATTTAAG+GGG | - | chr8.4:337189-337208 | None:intergenic | 25.0% |
| ! | ACAGGTATGTAAAATAATCA+TGG | - | chr8.4:335769-335788 | None:intergenic | 25.0% |
| ! | ACTACTTCAATTACAACTTT+GGG | + | chr8.4:337996-338015 | MS.gene43470:intron | 25.0% |
| ! | ACTCTACCAAGTTAAATTAT+AGG | + | chr8.4:336018-336037 | MS.gene43470:intron | 25.0% |
| ! | AGAATTGTAGCAAATTGATT+TGG | - | chr8.4:335068-335087 | None:intergenic | 25.0% |
| ! | ATGTGTACATAAGAATAAAG+TGG | + | chr8.4:335281-335300 | MS.gene43470:intron | 25.0% |
| ! | GACAACATAACTTCATTTAA+GGG | - | chr8.4:337190-337209 | None:intergenic | 25.0% |
| ! | GATTTATTCATGACAAGAAT+AGG | - | chr8.4:334239-334258 | None:intergenic | 25.0% |
| ! | GGCAATAATATCTAATTTGA+AGG | - | chr8.4:334879-334898 | None:intergenic | 25.0% |
| ! | TCATTGATACATACGAAAAA+TGG | + | chr8.4:337922-337941 | MS.gene43470:CDS | 25.0% |
| ! | TGAGTAAAATACTTGATCTT+AGG | - | chr8.4:338120-338139 | None:intergenic | 25.0% |
| ! | TGTGTACATAAGAATAAAGT+GGG | + | chr8.4:335282-335301 | MS.gene43470:intron | 25.0% |
| ! | TTAAAAGAAGAATGTAGAAG+AGG | - | chr8.4:335519-335538 | None:intergenic | 25.0% |
| !! | ACTATTTATCTGGTAAGTTT+TGG | + | chr8.4:334750-334769 | MS.gene43470:intron | 25.0% |
| !! | AGAATAGAGATTTAAAACCA+AGG | - | chr8.4:335097-335116 | None:intergenic | 25.0% |
| !! | AGTTGTGAGATTTTAGATAA+AGG | - | chr8.4:335935-335954 | None:intergenic | 25.0% |
| !! | TAAGATCAAGTATTTTACTC+AGG | + | chr8.4:338119-338138 | MS.gene43470:CDS | 25.0% |
| !! | TGGTTGATTATATCACATTT+TGG | - | chr8.4:336884-336903 | None:intergenic | 25.0% |
| !! | TTGAAAGATGACTTTGATTT+GGG | + | chr8.4:338228-338247 | MS.gene43470:CDS | 25.0% |
| !!! | AATTTAACTTGGTAGAGTAA+TGG | - | chr8.4:336016-336035 | None:intergenic | 25.0% |
| !!! | ATGTACACATTAGCTATTTT+AGG | - | chr8.4:335271-335290 | None:intergenic | 25.0% |
| !!! | ATTTAACTTGGTAGAGTAAT+GGG | - | chr8.4:336015-336034 | None:intergenic | 25.0% |
| !!! | CCTTCAATGAAAAAGTATTT+GGG | - | chr8.4:337081-337100 | None:intergenic | 25.0% |
| !!! | GAGAGTTGATAGAAAAAAAT+CGG | + | chr8.4:335662-335681 | MS.gene43470:intron | 25.0% |
| !!! | GGATGTCCATTTTTAAAAAA+TGG | - | chr8.4:337640-337659 | None:intergenic | 25.0% |
| !!! | TAGAACAATTACATTTTGGT+TGG | - | chr8.4:336994-337013 | None:intergenic | 25.0% |
| !!! | TCTCGTTTCAGTTATTTTTT+TGG | + | chr8.4:335612-335631 | MS.gene43470:intron | 25.0% |
| !!! | TGTACACATTAGCTATTTTA+GGG | - | chr8.4:335270-335289 | None:intergenic | 25.0% |
| AAAAACGTGATCAATCAGAA+AGG | + | chr8.4:337265-337284 | MS.gene43470:intron | 30.0% | |
| AAAAGATTCCCAACTATTTC+CGG | - | chr8.4:335451-335470 | None:intergenic | 30.0% | |
| AAAATCTCACAACTTCAACA+TGG | + | chr8.4:335941-335960 | MS.gene43470:intron | 30.0% | |
| AACTTCGCATGTTAAAACAT+TGG | - | chr8.4:336904-336923 | None:intergenic | 30.0% | |
| AAGAACAAACAAAATCTGTG+AGG | + | chr8.4:337710-337729 | MS.gene43470:intron | 30.0% | |
| AATGCTGAAATGAATACTAC+TGG | - | chr8.4:337867-337886 | None:intergenic | 30.0% | |
| ACAAGAATAGGTTTAAGTAG+AGG | - | chr8.4:334227-334246 | None:intergenic | 30.0% | |
| AGAACTCAGTTTGAATTTCA+AGG | + | chr8.4:334723-334742 | MS.gene43470:CDS | 30.0% | |
| AGGATTAAACAAAATAGCCA+AGG | - | chr8.4:335499-335518 | None:intergenic | 30.0% | |
| AGTAGTATTCATTTCAGCAT+TGG | + | chr8.4:337866-337885 | MS.gene43470:CDS | 30.0% | |
| ATAACCTGATCAAAAACAAC+CGG | - | chr8.4:338063-338082 | None:intergenic | 30.0% | |
| ATGCTGAAATGAATACTACT+GGG | - | chr8.4:337866-337885 | None:intergenic | 30.0% | |
| ATGTTATTAAATTACGGCCA+TGG | + | chr8.4:336232-336251 | MS.gene43470:intron | 30.0% | |
| CAAATCAAAGTCATCTTTCA+AGG | - | chr8.4:338229-338248 | None:intergenic | 30.0% | |
| CAGTAATAATACTAAGCAAC+AGG | - | chr8.4:335787-335806 | None:intergenic | 30.0% | |
| CTAGTAACTCATTTATCTTG+TGG | + | chr8.4:337011-337030 | MS.gene43470:intron | 30.0% | |
| CTGTGTTGTAAAAGATTGAT+TGG | - | chr8.4:336406-336425 | None:intergenic | 30.0% | |
| CTTGAAAGATGACTTTGATT+TGG | + | chr8.4:338227-338246 | MS.gene43470:CDS | 30.0% | |
| GGACAACATAACTTCATTTA+AGG | - | chr8.4:337191-337210 | None:intergenic | 30.0% | |
| GTAGTAAATATTCTTTCTCC+CGG | + | chr8.4:338041-338060 | MS.gene43470:intron | 30.0% | |
| GTGTACATAAGAATAAAGTG+GGG | + | chr8.4:335283-335302 | MS.gene43470:intron | 30.0% | |
| TAAGAAATAACAGCAGGATT+TGG | + | chr8.4:336162-336181 | MS.gene43470:intron | 30.0% | |
| TACTAAGAAGAACAACAAGT+TGG | + | chr8.4:333833-333852 | MS.gene43470:CDS | 30.0% | |
| TCAAGGAAGAACTATTTATC+TGG | + | chr8.4:334740-334759 | MS.gene43470:CDS | 30.0% | |
| TCTAAAGGAATGTATCTTGT+TGG | + | chr8.4:334817-334836 | MS.gene43470:intron | 30.0% | |
| TGAAGAGTAAAATGTGCAAT+TGG | + | chr8.4:338019-338038 | MS.gene43470:intron | 30.0% | |
| TTAACACCTAGAAATTAGAG+AGG | - | chr8.4:337296-337315 | None:intergenic | 30.0% | |
| ! | AAGGTTGATTTACCAACATT+GGG | - | chr8.4:334633-334652 | None:intergenic | 30.0% |
| ! | ATTCCAATCTATTCCTTTTC+TGG | + | chr8.4:333778-333797 | MS.gene43470:CDS | 30.0% |
| ! | CAAGTATTTTACTCAGGTTA+AGG | + | chr8.4:338125-338144 | MS.gene43470:CDS | 30.0% |
| ! | CATCTTTCAAGGATTTTGTT+AGG | - | chr8.4:338218-338237 | None:intergenic | 30.0% |
| ! | GTCTTTTTAACATCTATCAC+TGG | - | chr8.4:335331-335350 | None:intergenic | 30.0% |
| ! | TGTGAGATTTTAGATAAAGG+AGG | - | chr8.4:335932-335951 | None:intergenic | 30.0% |
| ! | TTAATACCTTTTGCAACCAA+CGG | - | chr8.4:337977-337996 | None:intergenic | 30.0% |
| ! | TTTAGTAGTGTTGTTAGAGT+TGG | + | chr8.4:334782-334801 | MS.gene43470:intron | 30.0% |
| !! | CATTATAGATGAAAGTGCTA+AGG | + | chr8.4:334527-334546 | MS.gene43470:intron | 30.0% |
| !! | CTGTATTGATAATGAACTTC+AGG | - | chr8.4:336580-336599 | None:intergenic | 30.0% |
| !! | GCCTTCAATGAAAAAGTATT+TGG | - | chr8.4:337082-337101 | None:intergenic | 30.0% |
| !! | GTACACATTAGCTATTTTAG+GGG | - | chr8.4:335269-335288 | None:intergenic | 30.0% |
| !!! | CCCAAATACTTTTTCATTGA+AGG | + | chr8.4:337078-337097 | MS.gene43470:intron | 30.0% |
| !!! | GAGTATTGGCAATTTTCAAT+AGG | + | chr8.4:337830-337849 | MS.gene43470:intron | 30.0% |
| !!! | TATCTGGTAAGTTTTGGTTT+TGG | + | chr8.4:334756-334775 | MS.gene43470:intron | 30.0% |
| AAAAATTATGGGACTGAAGC+AGG | - | chr8.4:337153-337172 | None:intergenic | 35.0% | |
| AAACCTGAGGTATAATTGTC+TGG | - | chr8.4:337542-337561 | None:intergenic | 35.0% | |
| AAAGGAATGTATCTTGTTGG+AGG | + | chr8.4:334820-334839 | MS.gene43470:intron | 35.0% | |
| AACAAGATGGATCTTCTAAG+GGG | + | chr8.4:337462-337481 | MS.gene43470:CDS | 35.0% | |
| AAGTCTGACAAGAGAGATAA+AGG | + | chr8.4:338351-338370 | MS.gene43470:CDS | 35.0% | |
| AATCCAGACAATTATACCTC+AGG | + | chr8.4:337536-337555 | MS.gene43470:CDS | 35.0% | |
| AATGAATACTACTGGGATTC+CGG | - | chr8.4:337859-337878 | None:intergenic | 35.0% | |
| ATAAAGAGGGACATGTTTGA+AGG | + | chr8.4:336047-336066 | MS.gene43470:intron | 35.0% | |
| ATAACTACATAGCAAACCTG+AGG | - | chr8.4:337555-337574 | None:intergenic | 35.0% | |
| ATACTTGATGTCACCTACAT+AGG | + | chr8.4:335553-335572 | MS.gene43470:intron | 35.0% | |
| ATGTAGGTGACATCAAGTAT+TGG | - | chr8.4:335553-335572 | None:intergenic | 35.0% | |
| ATTTGGGTGGAATTCCTATA+AGG | + | chr8.4:338244-338263 | MS.gene43470:CDS | 35.0% | |
| CAAATCGGAAAAGAAATGTG+TGG | - | chr8.4:334900-334919 | None:intergenic | 35.0% | |
| CACATACCAATGCATCATAA+TGG | - | chr8.4:337212-337231 | None:intergenic | 35.0% | |
| CATAAGAATAAAGTGGGGAT+AGG | + | chr8.4:335288-335307 | MS.gene43470:intron | 35.0% | |
| CATTTCCTGAAAATTACTCG+AGG | + | chr8.4:336483-336502 | MS.gene43470:intron | 35.0% | |
| CGTCTAGATGTTCAATGTAT+TGG | + | chr8.4:337586-337605 | MS.gene43470:intron | 35.0% | |
| CTAATGAAATGTCCCGTTTA+GGG | + | chr8.4:334300-334319 | MS.gene43470:CDS | 35.0% | |
| GAACAAGATGGATCTTCTAA+GGG | + | chr8.4:337461-337480 | MS.gene43470:CDS | 35.0% | |
| GAATCACTCTTTGATGTTGA+TGG | + | chr8.4:334260-334279 | MS.gene43470:CDS | 35.0% | |
| GTTATTTGGTTGCAAAGGAA+CGG | + | chr8.4:335403-335422 | MS.gene43470:intron | 35.0% | |
| GTTTACTCTGCGTTTATGAT+AGG | - | chr8.4:336640-336659 | None:intergenic | 35.0% | |
| TAAAGAGGGACATGTTTGAA+GGG | + | chr8.4:336048-336067 | MS.gene43470:intron | 35.0% | |
| TAACCTGATCAAAAACAACC+GGG | - | chr8.4:338062-338081 | None:intergenic | 35.0% | |
| TATATGCTCAGTGTCTTGAA+TGG | + | chr8.4:334407-334426 | MS.gene43470:CDS | 35.0% | |
| TCTATTGCTAAGAAAGATGC+TGG | + | chr8.4:338279-338298 | MS.gene43470:CDS | 35.0% | |
| TCTGGGTTCTTGAAAACTAA+GGG | - | chr8.4:336534-336553 | None:intergenic | 35.0% | |
| TGAACAAGATGGATCTTCTA+AGG | + | chr8.4:337460-337479 | MS.gene43470:CDS | 35.0% | |
| TGCCCTGTTATATACATCAT+CGG | + | chr8.4:335006-335025 | MS.gene43470:intron | 35.0% | |
| TGGAAACTGACAGAATCTAA+AGG | + | chr8.4:334802-334821 | MS.gene43470:intron | 35.0% | |
| TGTAGGTGACATCAAGTATT+GGG | - | chr8.4:335552-335571 | None:intergenic | 35.0% | |
| TGTTGGAGGAAAACATAGTA+TGG | + | chr8.4:334834-334853 | MS.gene43470:intron | 35.0% | |
| TGTTGTCCATTATGATGCAT+TGG | + | chr8.4:337203-337222 | MS.gene43470:intron | 35.0% | |
| TGTTGTGATTGTGAACAAGA+TGG | + | chr8.4:337449-337468 | MS.gene43470:CDS | 35.0% | |
| TTATTTGGTTGCAAAGGAAC+GGG | + | chr8.4:335404-335423 | MS.gene43470:intron | 35.0% | |
| TTCGTTTAGCACTTACTATC+TGG | - | chr8.4:337371-337390 | None:intergenic | 35.0% | |
| TTCTGGGTTCTTGAAAACTA+AGG | - | chr8.4:336535-336554 | None:intergenic | 35.0% | |
| TTGATCAGGAAGTTGGAAAA+TGG | + | chr8.4:334186-334205 | MS.gene43470:CDS | 35.0% | |
| TTGCAACAATGTATTCAGCA+AGG | - | chr8.4:334652-334671 | None:intergenic | 35.0% | |
| TTTGATGGAGGAAGAAGATA+GGG | + | chr8.4:336129-336148 | MS.gene43470:intron | 35.0% | |
| ! | AGGTTGATTTACCAACATTG+GGG | - | chr8.4:334632-334651 | None:intergenic | 35.0% |
| ! | AGTATTCATTTCAGCATTGG+AGG | + | chr8.4:337869-337888 | MS.gene43470:CDS | 35.0% |
| ! | ATTATGTTTTGCTGCCATTC+AGG | + | chr8.4:336697-336716 | MS.gene43470:intron | 35.0% |
| ! | CAAGGTTGATTTACCAACAT+TGG | - | chr8.4:334634-334653 | None:intergenic | 35.0% |
| ! | GCTACAATTCTGATTTTCCT+TGG | + | chr8.4:335077-335096 | MS.gene43470:intron | 35.0% |
| ! | GGAAATAGTTGGGAATCTTT+TGG | + | chr8.4:335450-335469 | MS.gene43470:intron | 35.0% |
| ! | GGCAATTTTCAATAGGTTAC+CGG | + | chr8.4:337837-337856 | MS.gene43470:intron | 35.0% |
| ! | GTATTCATTTCAGCATTGGA+GGG | + | chr8.4:337870-337889 | MS.gene43470:CDS | 35.0% |
| ! | TGCTTCAGTCCCATAATTTT+TGG | + | chr8.4:337152-337171 | MS.gene43470:intron | 35.0% |
| !! | AAAGATGACTTTGATTTGGG+TGG | + | chr8.4:338231-338250 | MS.gene43470:CDS | 35.0% |
| !! | GTGTTTTATGGTGGAAATAG+CGG | + | chr8.4:336319-336338 | MS.gene43470:intron | 35.0% |
| !! | TAGCTATTTTAGGGGTTTTC+CGG | - | chr8.4:335261-335280 | None:intergenic | 35.0% |
| !! | TAGGGTCTGCTTTAAGATAT+AGG | + | chr8.4:335219-335238 | MS.gene43470:intron | 35.0% |
| AATCAAGGAAGAGTCTACTC+CGG | + | chr8.4:336786-336805 | MS.gene43470:CDS | 40.0% | |
| ACAAACGCAACAAATGTAGG+CGG | - | chr8.4:338156-338175 | None:intergenic | 40.0% | |
| ACCTGATATCACCTTGATAC+AGG | + | chr8.4:336554-336573 | MS.gene43470:intron | 40.0% | |
| ACTTGAATGCGCACACAAAT+CGG | - | chr8.4:334915-334934 | None:intergenic | 40.0% | |
| AGAAGCAGTTCTATGGAGAA+TGG | - | chr8.4:334090-334109 | None:intergenic | 40.0% | |
| AGCATATAGTTCTCCAAGAC+AGG | - | chr8.4:334395-334414 | None:intergenic | 40.0% | |
| AGCCAATTTGTGAAGGATAG+TGG | + | chr8.4:336289-336308 | MS.gene43470:intron | 40.0% | |
| AGGAAGAAGATAGGGAAGTA+GGG | + | chr8.4:336137-336156 | MS.gene43470:intron | 40.0% | |
| AGGCAATAAACCAACAAGAC+CGG | + | chr8.4:335239-335258 | MS.gene43470:intron | 40.0% | |
| AGGGCTTAAGAAATAACAGC+AGG | + | chr8.4:336156-336175 | MS.gene43470:intron | 40.0% | |
| AGGTTATGAGCAGACATTCT+TGG | + | chr8.4:338076-338095 | MS.gene43470:intron | 40.0% | |
| AGTACAGAAACCTCTACTGA+AGG | - | chr8.4:333817-333836 | None:intergenic | 40.0% | |
| ATCAAGGTGATATCAGGTTC+TGG | - | chr8.4:336552-336571 | None:intergenic | 40.0% | |
| ATCAATGACCTGATGCAAGA+CGG | - | chr8.4:337910-337929 | None:intergenic | 40.0% | |
| ATTGAAGGCTCGATAGTTCT+AGG | + | chr8.4:337093-337112 | MS.gene43470:intron | 40.0% | |
| ATTGCTAAGAAAGATGCTGG+TGG | + | chr8.4:338282-338301 | MS.gene43470:CDS | 40.0% | |
| ATTGCTATATCTGCTGAGAC+TGG | + | chr8.4:334335-334354 | MS.gene43470:CDS | 40.0% | |
| ATTGCTTTGGTACTAGATGC+CGG | + | chr8.4:336818-336837 | MS.gene43470:CDS | 40.0% | |
| CAAGAAGATCGTGTTCTTGT+GGG | + | chr8.4:334669-334688 | MS.gene43470:CDS | 40.0% | |
| CAATTGTCCTTGGAGAGTAA+AGG | + | chr8.4:336205-336224 | MS.gene43470:intron | 40.0% | |
| CAGTGAAAGAAGCAGTTCTA+TGG | - | chr8.4:334097-334116 | None:intergenic | 40.0% | |
| CATTGATCCTTTACTCTCCA+AGG | - | chr8.4:336215-336234 | None:intergenic | 40.0% | |
| CCAAAGCAATTATATGAGCC+CGG | - | chr8.4:336808-336827 | None:intergenic | 40.0% | |
| CCACCAGAAAAGGAATAGAT+TGG | - | chr8.4:333784-333803 | None:intergenic | 40.0% | |
| CCCCGATGATGTATATAACA+GGG | - | chr8.4:335011-335030 | None:intergenic | 40.0% | |
| CCCTGTTATATACATCATCG+GGG | + | chr8.4:335008-335027 | MS.gene43470:intron | 40.0% | |
| CCTGTTATATACATCATCGG+GGG | + | chr8.4:335009-335028 | MS.gene43470:intron | 40.0% | |
| CCTTCACAAATTGGCTATAG+CGG | - | chr8.4:336285-336304 | None:intergenic | 40.0% | |
| CCTTGAGCATTATGCAATCA+AGG | + | chr8.4:336771-336790 | MS.gene43470:CDS | 40.0% | |
| CCTTGATTGCATAATGCTCA+AGG | - | chr8.4:336774-336793 | None:intergenic | 40.0% | |
| CTATCTTCTTCCTCCATCAA+AGG | - | chr8.4:336130-336149 | None:intergenic | 40.0% | |
| CTGGGTTCTTGAAAACTAAG+GGG | - | chr8.4:336533-336552 | None:intergenic | 40.0% | |
| CTTAATCCTTAAAGCCACTC+TGG | - | chr8.4:338334-338353 | None:intergenic | 40.0% | |
| CTTTACTCTCCAAGGACAAT+TGG | - | chr8.4:336207-336226 | None:intergenic | 40.0% | |
| CTTTGATGGAGGAAGAAGAT+AGG | + | chr8.4:336128-336147 | MS.gene43470:intron | 40.0% | |
| GCCCTGTTATATACATCATC+GGG | + | chr8.4:335007-335026 | MS.gene43470:intron | 40.0% | |
| GCTAATGAAATGTCCCGTTT+AGG | + | chr8.4:334299-334318 | MS.gene43470:CDS | 40.0% | |
| GCTGTTCTTGGTAGATTGTT+GGG | + | chr8.4:336447-336466 | MS.gene43470:intron | 40.0% | |
| GTCTCAGCAGATATAGCAAT+AGG | - | chr8.4:334335-334354 | None:intergenic | 40.0% | |
| GTCTCTCCTCTCTAATTTCT+AGG | + | chr8.4:337287-337306 | MS.gene43470:intron | 40.0% | |
| GTGAGGAAGAGTAAGGAATT+AGG | - | chr8.4:334140-334159 | None:intergenic | 40.0% | |
| TAGGATCTCCAAACCCTAAA+CGG | - | chr8.4:334316-334335 | None:intergenic | 40.0% | |
| TCAACAGTTCGTTACAGAGT+GGG | - | chr8.4:335356-335375 | None:intergenic | 40.0% | |
| TCAAGGTGATATCAGGTTCT+GGG | - | chr8.4:336551-336570 | None:intergenic | 40.0% | |
| TCTGTAACGAACTGTTGAGT+TGG | + | chr8.4:335358-335377 | MS.gene43470:intron | 40.0% | |
| TGCACAAACGCAACAAATGT+AGG | - | chr8.4:338159-338178 | None:intergenic | 40.0% | |
| TGCTGTTCTTGGTAGATTGT+TGG | + | chr8.4:336446-336465 | MS.gene43470:intron | 40.0% | |
| TGTTTGAAGGGAGGATAGAA+TGG | + | chr8.4:336060-336079 | MS.gene43470:intron | 40.0% | |
| TTCAATTTGCACACATCCTG+AGG | - | chr8.4:336089-336108 | None:intergenic | 40.0% | |
| TTCTTTGCTGCATATAGCCT+TGG | + | chr8.4:334944-334963 | MS.gene43470:intron | 40.0% | |
| TTGCTAAGAAAGATGCTGGT+GGG | + | chr8.4:338283-338302 | MS.gene43470:CDS | 40.0% | |
| TTTCCAACTTCCTGATCAAG+AGG | - | chr8.4:334185-334204 | None:intergenic | 40.0% | |
| ! | ACATTTGTTGCGTTTGTGCA+CGG | + | chr8.4:338159-338178 | MS.gene43470:CDS | 40.0% |
| ! | AGTGGCGATATGGTGTTTTA+TGG | + | chr8.4:336307-336326 | MS.gene43470:intron | 40.0% |
| ! | CAACACCTCGAGTAATTTTC+AGG | - | chr8.4:336491-336510 | None:intergenic | 40.0% |
| ! | CAAGGATTTTGTTAGGAACC+TGG | - | chr8.4:338211-338230 | None:intergenic | 40.0% |
| ! | CCAATCTATTCCTTTTCTGG+TGG | + | chr8.4:333781-333800 | MS.gene43470:CDS | 40.0% |
| ! | TAGAGTAATGGGACACATCA+TGG | - | chr8.4:336004-336023 | None:intergenic | 40.0% |
| ! | TCTTAACCGTTGGTTGCAAA+AGG | + | chr8.4:337968-337987 | MS.gene43470:CDS | 40.0% |
| ! | TTGAAGGCTCGATAGTTCTA+GGG | + | chr8.4:337094-337113 | MS.gene43470:intron | 40.0% |
| !! | GGTGTGTTATTTGGTTGCAA+AGG | + | chr8.4:335398-335417 | MS.gene43470:intron | 40.0% |
| AAATTACGGCCATGGCAGAT+TGG | + | chr8.4:336240-336259 | MS.gene43470:intron | 45.0% | |
| AATTACGGCCATGGCAGATT+GGG | + | chr8.4:336241-336260 | MS.gene43470:intron | 45.0% | |
| ACCAGCAGTATCAACCTGAA+TGG | - | chr8.4:336714-336733 | None:intergenic | 45.0% | |
| ACCATACTAACCGCCTTTGA+TGG | + | chr8.4:336114-336133 | MS.gene43470:intron | 45.0% | |
| AGAAACCTCTACTGAAGGTG+CGG | - | chr8.4:333812-333831 | None:intergenic | 45.0% | |
| AGATACGGCCGGAAATAGTT+GGG | + | chr8.4:335440-335459 | MS.gene43470:intron | 45.0% | |
| AGCATCAGTGAGGAAGAGTA+AGG | - | chr8.4:334147-334166 | None:intergenic | 45.0% | |
| AGCATCCTATGAGCAGATTC+TGG | + | chr8.4:337497-337516 | MS.gene43470:CDS | 45.0% | |
| AGCTTTCTGATACAGACACC+AGG | + | chr8.4:338190-338209 | MS.gene43470:CDS | 45.0% | |
| AGGATCTCCAAACCCTAAAC+GGG | - | chr8.4:334315-334334 | None:intergenic | 45.0% | |
| ATAAAGTGGGGATAGGATGC+AGG | + | chr8.4:335295-335314 | MS.gene43470:intron | 45.0% | |
| ATACTAACCGCCTTTGATGG+AGG | + | chr8.4:336117-336136 | MS.gene43470:intron | 45.0% | |
| ATATAAGCAGCATACCTCGC+CGG | - | chr8.4:336840-336859 | None:intergenic | 45.0% | |
| ATATCTGCTGAGACTGGACT+TGG | + | chr8.4:334341-334360 | MS.gene43470:CDS | 45.0% | |
| ATATGCAGCAAAGAAGCTCG+CGG | - | chr8.4:334939-334958 | None:intergenic | 45.0% | |
| ATCAAGGAAGAGTCTACTCC+GGG | + | chr8.4:336787-336806 | MS.gene43470:CDS | 45.0% | |
| ATCCTATGAGCAGATTCTGG+AGG | + | chr8.4:337500-337519 | MS.gene43470:CDS | 45.0% | |
| ATGGAGAATGGAACCAGAAG+TGG | - | chr8.4:334078-334097 | None:intergenic | 45.0% | |
| CAAAGGAACGGGTGTGAATT+GGG | + | chr8.4:335415-335434 | MS.gene43470:intron | 45.0% | |
| CAACAGTTCGTTACAGAGTG+GGG | - | chr8.4:335355-335374 | None:intergenic | 45.0% | |
| CAAGACACTCCAATTGTCCT+TGG | + | chr8.4:336195-336214 | MS.gene43470:intron | 45.0% | |
| CAAGAGAGATAAAGGCGACT+TGG | + | chr8.4:338359-338378 | MS.gene43470:CDS | 45.0% | |
| CACAAATTGGCTATAGCGGT+TGG | - | chr8.4:336281-336300 | None:intergenic | 45.0% | |
| CAGACATTCTTGGAAAGACC+AGG | + | chr8.4:338086-338105 | MS.gene43470:CDS | 45.0% | |
| CAGAGGACAAAACTGGAGAA+AGG | + | chr8.4:336740-336759 | MS.gene43470:CDS | 45.0% | |
| CATCCTCTTGATCAGGAAGT+TGG | + | chr8.4:334179-334198 | MS.gene43470:CDS | 45.0% | |
| CCATTGCAGCTAGCAATTGT+AGG | + | chr8.4:334603-334622 | MS.gene43470:CDS | 45.0% | |
| CCCCCGATGATGTATATAAC+AGG | - | chr8.4:335012-335031 | None:intergenic | 45.0% | |
| CCGCTATAGCCAATTTGTGA+AGG | + | chr8.4:336282-336301 | MS.gene43470:intron | 45.0% | |
| CCGGGCTCATATAATTGCTT+TGG | + | chr8.4:336805-336824 | MS.gene43470:CDS | 45.0% | |
| CCTACAATTGCTAGCTGCAA+TGG | - | chr8.4:334606-334625 | None:intergenic | 45.0% | |
| CGATTGCAGATGGCAGTAAA+TGG | - | chr8.4:336360-336379 | None:intergenic | 45.0% | |
| CGCCACTATCCTTCACAAAT+TGG | - | chr8.4:336294-336313 | None:intergenic | 45.0% | |
| CGTGAAGGAGTCGCTAAATT+AGG | + | chr8.4:334005-334024 | MS.gene43470:CDS | 45.0% | |
| CTCAACAGTTCGTTACAGAG+TGG | - | chr8.4:335357-335376 | None:intergenic | 45.0% | |
| CTTAAAGCCACTCTGGCAAT+TGG | - | chr8.4:338327-338346 | None:intergenic | 45.0% | |
| CTTGCTTCAAGCACCTATGT+AGG | - | chr8.4:335569-335588 | None:intergenic | 45.0% | |
| GAACGCTGCATGATCCTTAT+AGG | - | chr8.4:338261-338280 | None:intergenic | 45.0% | |
| GAGGAAGAAGATAGGGAAGT+AGG | + | chr8.4:336136-336155 | MS.gene43470:intron | 45.0% | |
| GCAAGAAGATCGTGTTCTTG+TGG | + | chr8.4:334668-334687 | MS.gene43470:CDS | 45.0% | |
| GCCTGTATCAAGGTGATATC+AGG | - | chr8.4:336558-336577 | None:intergenic | 45.0% | |
| GGTGTGAATTGGGAGAGATA+CGG | + | chr8.4:335425-335444 | MS.gene43470:intron | 45.0% | |
| TAAAGTGGGGATAGGATGCA+GGG | + | chr8.4:335296-335315 | MS.gene43470:intron | 45.0% | |
| TAGCCAAGGCAATTAGAGAG+CGG | - | chr8.4:335485-335504 | None:intergenic | 45.0% | |
| TCCATCAAAGGCGGTTAGTA+TGG | - | chr8.4:336118-336137 | None:intergenic | 45.0% | |
| TCTCTCACTTCAACCTGTCT+TGG | + | chr8.4:334379-334398 | MS.gene43470:CDS | 45.0% | |
| TCTTCTTCCTCCATCAAAGG+CGG | - | chr8.4:336127-336146 | None:intergenic | 45.0% | |
| TGAACTTCAGGCCTGTATCA+AGG | - | chr8.4:336568-336587 | None:intergenic | 45.0% | |
| TGGTCTTCATCCTCTTGATC+AGG | + | chr8.4:334172-334191 | MS.gene43470:CDS | 45.0% | |
| TTGCAGATGGCAGTAAATGG+TGG | - | chr8.4:336357-336376 | None:intergenic | 45.0% | |
| TTGGTTGCAGAGGACAAAAC+TGG | + | chr8.4:336733-336752 | MS.gene43470:CDS | 45.0% | |
| ! | AGACAGACAAGTGCTGTTCT+TGG | + | chr8.4:336435-336454 | MS.gene43470:intron | 45.0% |
| ! | AGATGGCAGTAAATGGTGGA+AGG | - | chr8.4:336353-336372 | None:intergenic | 45.0% |
| ! | AGTAATGGGACACATCATGG+AGG | - | chr8.4:336001-336020 | None:intergenic | 45.0% |
| ! | ATTTCAGCATTGGAGGGAAG+GGG | + | chr8.4:337876-337895 | MS.gene43470:CDS | 45.0% |
| ! | CAATTGCCAGAGTGGCTTTA+AGG | + | chr8.4:338325-338344 | MS.gene43470:CDS | 45.0% |
| ! | CATTTCAGCATTGGAGGGAA+GGG | + | chr8.4:337875-337894 | MS.gene43470:CDS | 45.0% |
| ! | CATTTGTTGCGTTTGTGCAC+GGG | + | chr8.4:338160-338179 | MS.gene43470:CDS | 45.0% |
| ! | GAAATGTCCCGTTTAGGGTT+TGG | + | chr8.4:334305-334324 | MS.gene43470:CDS | 45.0% |
| ! | GATTTGGAGCTGATCATGCT+AGG | - | chr8.4:335052-335071 | None:intergenic | 45.0% |
| ! | GGCGATATGGTGTTTTATGG+TGG | + | chr8.4:336310-336329 | MS.gene43470:intron | 45.0% |
| ! | TCACCTGCGTTTCAGAGTTT+TGG | + | chr8.4:334028-334047 | MS.gene43470:CDS | 45.0% |
| ! | TCAGCGTTATCGATTGCAGA+TGG | - | chr8.4:336370-336389 | None:intergenic | 45.0% |
| ! | TCATTTCAGCATTGGAGGGA+AGG | + | chr8.4:337874-337893 | MS.gene43470:CDS | 45.0% |
| ! | TGTGAAGGATAGTGGCGATA+TGG | + | chr8.4:336297-336316 | MS.gene43470:intron | 45.0% |
| !! | ACTCGAGGTGTTGAATCTGA+TGG | + | chr8.4:336498-336517 | MS.gene43470:intron | 45.0% |
| !! | AGGCGACTTGGTTGAATCAA+AGG | + | chr8.4:338371-338390 | MS.gene43470:CDS | 45.0% |
| !! | AGTCCAAAACTCTGAAACGC+AGG | - | chr8.4:334034-334053 | None:intergenic | 45.0% |
| !! | TAACGAACTGTTGAGTTGGC+TGG | + | chr8.4:335362-335381 | MS.gene43470:intron | 45.0% |
| !! | TGAAAACTAAGGGGTGTCCT+CGG | - | chr8.4:336524-336543 | None:intergenic | 45.0% |
| !! | TTCAGGTTGATACTGCTGGT+TGG | + | chr8.4:336714-336733 | MS.gene43470:intron | 45.0% |
| !!! | AGTTTTGGACTCTGCTGGTT+TGG | + | chr8.4:334043-334062 | MS.gene43470:CDS | 45.0% |
| !!! | TCTCCCGGTTGTTTTTGATC+AGG | + | chr8.4:338056-338075 | MS.gene43470:intron | 45.0% |
| !!! | TTCAGAGTTTTGGACTCTGC+TGG | + | chr8.4:334038-334057 | MS.gene43470:CDS | 45.0% |
| AAGCCACTCTGGCAATTGGA+TGG | - | chr8.4:338323-338342 | None:intergenic | 50.0% | |
| AGAGGGACATGTTTGAAGGG+AGG | + | chr8.4:336051-336070 | MS.gene43470:intron | 50.0% | |
| AGCCTCCAGAATCTGCTCAT+AGG | - | chr8.4:337505-337524 | None:intergenic | 50.0% | |
| AGCGAGATTGCATATCGCCA+AGG | - | chr8.4:334964-334983 | None:intergenic | 50.0% | |
| AGTGCAGATTTGCCGACGTT+AGG | - | chr8.4:333912-333931 | None:intergenic | 50.0% | |
| ATTACGGCCATGGCAGATTG+GGG | + | chr8.4:336242-336261 | MS.gene43470:intron | 50.0% | |
| ATTGTAGGACGCCCCAATGT+TGG | + | chr8.4:334618-334637 | MS.gene43470:CDS | 50.0% | |
| CAGATTTGCCGACGTTAGGT+CGG | - | chr8.4:333908-333927 | None:intergenic | 50.0% | |
| CCTGATGCAAGACGGTTGTA+CGG | - | chr8.4:337902-337921 | None:intergenic | 50.0% | |
| CTACAGCTCGTCTTAACCGT+TGG | + | chr8.4:337958-337977 | MS.gene43470:CDS | 50.0% | |
| GAGATACGGCCGGAAATAGT+TGG | + | chr8.4:335439-335458 | MS.gene43470:intron | 50.0% | |
| GAGGATAGAATGGAGACCTC+AGG | + | chr8.4:336070-336089 | MS.gene43470:intron | 50.0% | |
| GCAAAGGAACGGGTGTGAAT+TGG | + | chr8.4:335414-335433 | MS.gene43470:intron | 50.0% | |
| GGTTAGTGCATGAGATGCGA+TGG | + | chr8.4:335633-335652 | MS.gene43470:intron | 50.0% | |
| TAGCCATCCAATTGCCAGAG+TGG | + | chr8.4:338317-338336 | MS.gene43470:CDS | 50.0% | |
| TAGTGCATGAGATGCGATGG+TGG | + | chr8.4:335636-335655 | MS.gene43470:intron | 50.0% | |
| TCTCTTGTGAGACCAGCTTC+AGG | - | chr8.4:334696-334715 | None:intergenic | 50.0% | |
| TGAATTGGGAGAGATACGGC+CGG | + | chr8.4:335429-335448 | MS.gene43470:intron | 50.0% | |
| TGACCGCTCTCTAATTGCCT+TGG | + | chr8.4:335479-335498 | MS.gene43470:intron | 50.0% | |
| TTCCTCACTGATGCTAGAGC+TGG | + | chr8.4:334152-334171 | MS.gene43470:CDS | 50.0% | |
| TTGGAAGCTGAAGCCACTTC+TGG | + | chr8.4:334062-334081 | MS.gene43470:CDS | 50.0% | |
| ! | ATACTGCTGGTTGGTTGCAG+AGG | + | chr8.4:336723-336742 | MS.gene43470:CDS | 50.0% |
| ! | GGAACTAGTCTCATCATCGC+AGG | - | chr8.4:334559-334578 | None:intergenic | 50.0% |
| ! | GGGCTAGTGGGTGTGTTATT+TGG | + | chr8.4:335389-335408 | MS.gene43470:intron | 50.0% |
| ! | TGATGAGACTAGTTCCCCTG+AGG | + | chr8.4:334563-334582 | MS.gene43470:CDS | 50.0% |
| !! | AACTGTTGAGTTGGCTGGAG+GGG | + | chr8.4:335367-335386 | MS.gene43470:intron | 50.0% |
| !! | AAGGCTCGATAGTTCTAGGG+TGG | + | chr8.4:337097-337116 | MS.gene43470:intron | 50.0% |
| !! | GAACTGTTGAGTTGGCTGGA+GGG | + | chr8.4:335366-335385 | MS.gene43470:intron | 50.0% |
| !! | GCCATTCAGGTTGATACTGC+TGG | + | chr8.4:336710-336729 | MS.gene43470:intron | 50.0% |
| !! | TAGGGGTTTTCCGGTCTTGT+TGG | - | chr8.4:335252-335271 | None:intergenic | 50.0% |
| AAGACCACGTCCCTCTTCCA+CGG | - | chr8.4:337430-337449 | None:intergenic | 55.0% | |
| AGGTCGGCCGAGAATGATGA+CGG | - | chr8.4:333892-333911 | None:intergenic | 55.0% | |
| AGTTATAGCCAGACGAGCCG+TGG | + | chr8.4:337410-337429 | MS.gene43470:CDS | 55.0% | |
| ATTCTCGGCCGACCTAACGT+CGG | + | chr8.4:333897-333916 | MS.gene43470:CDS | 55.0% | |
| CCGTACAACCGTCTTGCATC+AGG | + | chr8.4:337899-337918 | MS.gene43470:CDS | 55.0% | |
| CGACTCCTTCACGAATGTCG+CGG | - | chr8.4:333998-334017 | None:intergenic | 55.0% | |
| CTCCCCACCGTCATCATTCT+CGG | + | chr8.4:333882-333901 | MS.gene43470:CDS | 55.0% | |
| GACTCCTTCACGAATGTCGC+GGG | - | chr8.4:333997-334016 | None:intergenic | 55.0% | |
| GTTCTTGTGGGTCCTGAAGC+TGG | + | chr8.4:334681-334700 | MS.gene43470:CDS | 55.0% | |
| GTTTGCTTTCGTCCGCCTCA+GGG | - | chr8.4:334581-334600 | None:intergenic | 55.0% | |
| TGATCTTAGGCTGTGCTGCC+TGG | - | chr8.4:338107-338126 | None:intergenic | 55.0% | |
| TTTGCTTTCGTCCGCCTCAG+GGG | - | chr8.4:334580-334599 | None:intergenic | 55.0% | |
| TTTGGTACTAGATGCCGGCG+AGG | + | chr8.4:336823-336842 | MS.gene43470:CDS | 55.0% | |
| ! | AACCTCTACTGAAGGTGCGG+CGG | - | chr8.4:333809-333828 | None:intergenic | 55.0% |
| ! | AGTTTGCTTTCGTCCGCCTC+AGG | - | chr8.4:334582-334601 | None:intergenic | 55.0% |
| ! | GACCAGCTCTAGCATCAGTG+AGG | - | chr8.4:334157-334176 | None:intergenic | 55.0% |
| ! | GGTGTTGAATCTGATGGCCG+AGG | + | chr8.4:336504-336523 | MS.gene43470:intron | 55.0% |
| ! | TGAGACTAGTTCCCCTGAGG+CGG | + | chr8.4:334566-334585 | MS.gene43470:CDS | 55.0% |
| !! | ACTGTTGAGTTGGCTGGAGG+GGG | + | chr8.4:335368-335387 | MS.gene43470:intron | 55.0% |
| !! | CGAACTGTTGAGTTGGCTGG+AGG | + | chr8.4:335365-335384 | MS.gene43470:intron | 55.0% |
| ACTGCCACCCCAATCTGCCA+TGG | - | chr8.4:336252-336271 | None:intergenic | 60.0% | |
| GTCACCCGCGACATTCGTGA+AGG | + | chr8.4:333990-334009 | MS.gene43470:CDS | 60.0% | |
| GTCGCGGGTGACATGATCGT+CGG | - | chr8.4:333982-334001 | None:intergenic | 60.0% | |
| TCGCGGGTGACATGATCGTC+GGG | - | chr8.4:333981-334000 | None:intergenic | 60.0% | |
| ! | ACCTCTACTGAAGGTGCGGC+GGG | - | chr8.4:333808-333827 | None:intergenic | 60.0% |
| !! | CGGCCGAGAATGATGACGGT+GGG | - | chr8.4:333888-333907 | None:intergenic | 60.0% |
| !! | CTGTTGAGTTGGCTGGAGGG+GGG | + | chr8.4:335369-335388 | MS.gene43470:intron | 60.0% |
| !! | GGCCGAGAATGATGACGGTG+GGG | - | chr8.4:333887-333906 | None:intergenic | 60.0% |
| !! | TCGGCCGAGAATGATGACGG+TGG | - | chr8.4:333889-333908 | None:intergenic | 60.0% |
| ACCCGCCGCACCTTCAGTAG+AGG | + | chr8.4:333804-333823 | MS.gene43470:CDS | 65.0% | |
| ACGGCCATGGCAGATTGGGG+TGG | + | chr8.4:336245-336264 | MS.gene43470:intron | 65.0% | |
| AGCCAGACGAGCCGTGGAAG+AGG | + | chr8.4:337416-337435 | MS.gene43470:CDS | 65.0% | |
| GCCAGACGAGCCGTGGAAGA+GGG | + | chr8.4:337417-337436 | MS.gene43470:CDS | 65.0% | |
| TCCCTCTTCCACGGCTCGTC+TGG | - | chr8.4:337421-337440 | None:intergenic | 65.0% | |
| TGCGGCGGGTCCACCAGAAA+AGG | - | chr8.4:333794-333813 | None:intergenic | 65.0% | |
| ! | TTGGCTGGAGGGGGGCTAGT+GGG | + | chr8.4:335377-335396 | MS.gene43470:intron | 65.0% |
| CGAGCCGTGGAAGAGGGACG+TGG | + | chr8.4:337423-337442 | MS.gene43470:CDS | 70.0% | |
| GTTGGCTGGAGGGGGGCTAG+TGG | + | chr8.4:335376-335395 | MS.gene43470:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 333771 | 338398 | 333771 | ID=MS.gene43470 |
| chr8.4 | mRNA | 333771 | 338398 | 333771 | ID=MS.gene43470.t1;Parent=MS.gene43470 |
| chr8.4 | exon | 333771 | 334428 | 333771 | ID=MS.gene43470.t1.exon1;Parent=MS.gene43470.t1 |
| chr8.4 | CDS | 333771 | 334428 | 333771 | ID=cds.MS.gene43470.t1;Parent=MS.gene43470.t1 |
| chr8.4 | exon | 334535 | 334761 | 334535 | ID=MS.gene43470.t1.exon2;Parent=MS.gene43470.t1 |
| chr8.4 | CDS | 334535 | 334761 | 334535 | ID=cds.MS.gene43470.t1;Parent=MS.gene43470.t1 |
| chr8.4 | exon | 336719 | 336844 | 336719 | ID=MS.gene43470.t1.exon3;Parent=MS.gene43470.t1 |
| chr8.4 | CDS | 336719 | 336844 | 336719 | ID=cds.MS.gene43470.t1;Parent=MS.gene43470.t1 |
| chr8.4 | exon | 337372 | 337557 | 337372 | ID=MS.gene43470.t1.exon4;Parent=MS.gene43470.t1 |
| chr8.4 | CDS | 337372 | 337557 | 337372 | ID=cds.MS.gene43470.t1;Parent=MS.gene43470.t1 |
| chr8.4 | exon | 337852 | 337989 | 337852 | ID=MS.gene43470.t1.exon5;Parent=MS.gene43470.t1 |
| chr8.4 | CDS | 337852 | 337989 | 337852 | ID=cds.MS.gene43470.t1;Parent=MS.gene43470.t1 |
| chr8.4 | exon | 338078 | 338398 | 338078 | ID=MS.gene43470.t1.exon6;Parent=MS.gene43470.t1 |
| chr8.4 | CDS | 338078 | 338398 | 338078 | ID=cds.MS.gene43470.t1;Parent=MS.gene43470.t1 |
| Gene Sequence |
| Protein sequence |
