AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene43563


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43563.t1 MTR_1g036270 93.488 430 28 0 1 430 84 513 0.0 839
MS.gene43563.t1 MTR_1g050362 75.058 429 104 2 1 429 82 507 0.0 670
MS.gene43563.t1 MTR_1g035800 74.186 430 108 3 1 428 84 512 0.0 645
MS.gene43563.t1 MTR_1g035580 73.318 431 99 4 1 430 83 498 0.0 641
MS.gene43563.t1 MTR_1g036200 73.086 431 104 4 1 430 82 501 0.0 634
MS.gene43563.t1 MTR_1g035790 69.838 431 119 4 1 430 84 504 0.0 616
MS.gene43563.t1 MTR_1g035750 62.500 432 153 8 1 430 83 507 0.0 543
MS.gene43563.t1 MTR_1g036130 61.253 431 160 5 1 430 84 508 0.0 540
MS.gene43563.t1 MTR_1g035670 60.325 431 160 5 1 430 84 504 0.0 540
MS.gene43563.t1 MTR_1g035940 61.201 433 158 7 1 430 84 509 0.0 528
MS.gene43563.t1 MTR_1g036010 60.185 432 164 5 1 430 84 509 0.0 524
MS.gene43563.t1 MTR_1g035830 60.648 432 162 6 1 430 84 509 0.0 523
MS.gene43563.t1 MTR_1g035760 59.165 431 142 4 1 430 84 481 0.0 514
MS.gene43563.t1 MTR_1g069715 59.951 412 159 5 1 411 1 407 3.99e-180 518
MS.gene43563.t1 MTR_1g035860 58.871 372 141 6 1 371 90 450 4.83e-156 451
MS.gene43563.t1 MTR_8g088470 53.380 429 183 6 1 428 79 491 3.14e-155 448
MS.gene43563.t1 MTR_7g033580 52.668 431 186 5 1 430 83 496 1.01e-153 444
MS.gene43563.t1 MTR_7g033570 52.204 431 188 5 1 430 83 496 4.11e-152 441
MS.gene43563.t1 MTR_6g004600 50.457 438 202 8 1 430 87 517 1.40e-147 430
MS.gene43563.t1 MTR_6g004590 48.055 437 214 7 1 430 87 517 1.49e-142 417
MS.gene43563.t1 MTR_6g004630 48.019 429 210 5 1 428 87 503 4.59e-142 415
MS.gene43563.t1 MTR_6g004670 47.209 430 214 5 1 428 87 505 2.64e-141 413
MS.gene43563.t1 MTR_6g004610 46.963 428 214 4 1 427 47 462 2.10e-139 407
MS.gene43563.t1 MTR_4g012320 60.465 215 83 2 217 430 12 225 5.61e-96 287
MS.gene43563.t1 MTR_1g037560 37.300 437 254 8 2 429 119 544 3.27e-92 289
MS.gene43563.t1 MTR_1g037550 36.652 442 254 9 2 429 119 548 6.00e-92 288
MS.gene43563.t1 MTR_4g075110 37.613 444 240 11 2 428 126 549 1.64e-90 285
MS.gene43563.t1 MTR_8g098435 36.613 437 247 8 2 428 89 505 8.55e-89 279
MS.gene43563.t1 MTR_8g030590 35.862 435 258 7 2 428 89 510 5.35e-83 265
MS.gene43563.t1 MTR_3g080580 33.408 446 259 8 1 428 92 517 4.44e-79 254
MS.gene43563.t1 MTR_5g070010 34.396 439 254 8 2 428 92 508 5.80e-78 251
MS.gene43563.t1 MTR_7g088330 34.537 443 248 12 2 428 92 508 3.23e-77 249
MS.gene43563.t1 MTR_7g096340 32.037 437 261 11 3 429 93 503 1.92e-76 246
MS.gene43563.t1 MTR_8g035860 36.009 436 256 11 2 428 88 509 2.04e-75 244
MS.gene43563.t1 MTR_1g070345 34.018 438 252 11 3 429 94 505 8.35e-75 243
MS.gene43563.t1 MTR_7g029275 33.708 445 248 13 2 428 93 508 2.16e-74 241
MS.gene43563.t1 MTR_7g096320 32.265 437 260 11 2 428 93 503 1.02e-73 239
MS.gene43563.t1 MTR_3g463060 35.335 433 247 11 2 428 97 502 1.01e-72 237
MS.gene43563.t1 MTR_8g035810 34.773 440 256 14 2 428 89 510 3.14e-72 236
MS.gene43563.t1 MTR_8g035820 35.092 436 260 11 2 428 88 509 3.63e-72 236
MS.gene43563.t1 MTR_1g070365 34.018 438 250 12 3 428 94 504 5.69e-71 233
MS.gene43563.t1 MTR_4g054920 33.258 445 253 13 2 428 98 516 2.23e-69 228
MS.gene43563.t1 MTR_2g086040 34.988 403 233 8 2 402 95 470 2.66e-69 228
MS.gene43563.t1 MTR_1g060550 34.475 438 251 12 2 428 100 512 2.90e-68 226
MS.gene43563.t1 MTR_8g035780 32.426 441 267 15 2 429 89 511 2.17e-66 221
MS.gene43563.t1 MTR_8g035680 31.002 429 266 10 2 420 95 503 7.31e-65 216
MS.gene43563.t1 MTR_8g035760 31.264 435 256 12 2 420 95 502 5.86e-64 214
MS.gene43563.t1 MTR_5g019140 31.648 455 270 12 1 429 92 531 1.33e-61 208
MS.gene43563.t1 MTR_1g102220 29.425 435 282 11 2 428 89 506 3.62e-61 207
MS.gene43563.t1 MTR_4g119660 31.579 456 269 13 1 429 77 516 5.95e-61 206
MS.gene43563.t1 MTR_8g035810 33.333 381 225 12 2 371 89 451 1.53e-56 193
MS.gene43563.t1 MTR_8g035680 30.914 372 231 8 55 420 5 356 4.27e-55 187
MS.gene43563.t1 MTR_7g406990 31.065 338 201 8 2 326 101 419 2.00e-41 152
MS.gene43563.t1 MTR_1g070370 33.208 265 147 7 86 347 5 242 4.02e-38 138
MS.gene43563.t1 MTR_1g040110 53.153 111 52 0 43 153 57 167 1.70e-37 134
MS.gene43563.t1 MTR_1g102210 27.654 358 214 11 77 428 43 361 2.90e-37 139
MS.gene43563.t1 MTR_1g050590 58.065 124 42 4 169 292 5 118 1.41e-35 127
MS.gene43563.t1 MTR_8g035810 30.128 312 190 11 2 302 89 383 2.95e-33 129
MS.gene43563.t1 MTR_7g079440 25.058 431 292 14 5 428 242 648 4.53e-27 114
MS.gene43563.t1 MTR_1g036140 56.311 103 36 3 169 271 69 162 5.80e-26 103
MS.gene43563.t1 MTR_8g046580 48.515 101 51 1 304 404 193 292 5.73e-23 99.0
MS.gene43563.t1 MTR_8g035790 45.455 99 51 3 333 429 1 98 3.11e-21 88.6
MS.gene43563.t1 MTR_5g009110 21.995 441 280 12 3 402 125 542 3.67e-21 96.3
MS.gene43563.t1 MTR_7g079440 26.197 355 234 12 5 355 242 572 4.40e-21 96.3
MS.gene43563.t1 MTR_2g010330 27.237 257 164 4 172 408 231 484 6.34e-21 95.5
MS.gene43563.t1 MTR_6g084040 48.515 101 33 2 1 100 83 165 6.47e-21 89.7
MS.gene43563.t1 MTR_2g010320 26.124 356 229 11 63 408 149 480 3.45e-20 93.2
MS.gene43563.t1 MTR_6g008500 28.218 202 128 4 213 408 319 509 5.35e-20 92.8
MS.gene43563.t1 MTR_2g010250 30.653 199 134 3 211 408 287 482 5.69e-20 92.4
MS.gene43563.t1 MTR_6g008530 30.412 194 118 4 213 400 313 495 5.77e-20 92.4
MS.gene43563.t1 MTR_2g010290 27.386 241 168 4 172 408 272 509 3.57e-19 90.1
MS.gene43563.t1 MTR_5g009110 21.823 417 262 12 27 402 1 394 4.33e-19 89.4
MS.gene43563.t1 MTR_8g104030 32.402 179 112 5 221 398 74 244 8.56e-19 86.7
MS.gene43563.t1 MTR_7g006900 29.680 219 139 6 200 417 256 460 9.65e-19 88.6
MS.gene43563.t1 MTR_8g098565 28.365 208 140 5 228 428 301 506 2.23e-18 87.8
MS.gene43563.t1 MTR_7g012860 30.942 223 134 7 190 407 266 473 2.49e-18 87.4
MS.gene43563.t1 MTR_0287s0060 30.942 223 134 7 190 407 266 473 2.49e-18 87.4
MS.gene43563.t1 MTR_8g104100 32.961 179 111 5 221 398 55 225 3.08e-18 84.7
MS.gene43563.t1 MTR_4g088420 33.333 183 113 5 228 408 31 206 3.75e-18 83.6
MS.gene43563.t1 MTR_2g010380 27.966 236 163 4 198 428 276 509 4.49e-18 86.7
MS.gene43563.t1 MTR_2g062670 32.000 200 97 7 71 261 54 223 5.41e-18 86.3
MS.gene43563.t1 MTR_1g101040 23.426 397 265 13 26 417 141 503 7.59e-18 85.9
MS.gene43563.t1 MTR_3g093530 24.221 417 266 19 13 416 132 511 8.72e-18 85.9
MS.gene43563.t1 MTR_6g008430 23.739 337 221 10 81 407 179 489 9.72e-18 85.9
MS.gene43563.t1 MTR_1g062190 23.598 428 296 16 9 428 135 539 3.49e-17 84.0
MS.gene43563.t1 MTR_6g008600 29.381 194 120 4 213 400 311 493 3.52e-17 84.0
MS.gene43563.t1 MTR_8g042000 24.074 432 253 16 14 416 126 511 8.87e-17 82.8
MS.gene43563.t1 MTR_5g070690 30.939 181 113 3 221 398 295 466 1.08e-16 82.4
MS.gene43563.t1 MTR_5g070800 30.939 181 113 3 221 398 295 466 1.08e-16 82.4
MS.gene43563.t1 MTR_4g071710 28.509 228 146 6 187 405 265 484 1.11e-16 82.4
MS.gene43563.t1 MTR_2g010280 29.648 199 136 3 211 408 285 480 1.17e-16 82.4
MS.gene43563.t1 MTR_3g014880 29.703 202 125 4 213 408 310 500 1.18e-16 82.4
MS.gene43563.t1 MTR_8g042060 24.242 429 256 16 14 416 126 511 1.32e-16 82.4
MS.gene43563.t1 MTR_0025s0110 24.272 412 270 14 14 417 137 514 1.66e-16 82.0
MS.gene43563.t1 MTR_6g008640 29.381 194 120 4 213 400 307 489 1.91e-16 81.6
MS.gene43563.t1 MTR_5g070920 28.652 178 121 2 221 398 296 467 2.57e-16 81.3
MS.gene43563.t1 MTR_0171s0020 26.493 268 176 7 137 398 220 472 2.99e-16 81.3
MS.gene43563.t1 MTR_1g101050 28.054 221 147 5 200 417 288 499 3.21e-16 80.9
MS.gene43563.t1 MTR_2g072270 25.243 412 238 15 10 398 128 492 3.27e-16 80.9
MS.gene43563.t1 MTR_2g010300 27.638 199 126 4 211 408 285 466 3.56e-16 80.9
MS.gene43563.t1 MTR_6g008620 30.387 181 119 4 221 400 317 491 3.64e-16 80.9
MS.gene43563.t1 MTR_6g072490 27.602 221 148 5 200 417 290 501 4.42e-16 80.5
MS.gene43563.t1 MTR_8g012585 28.061 196 133 4 215 408 237 426 4.82e-16 80.1
MS.gene43563.t1 MTR_5g034900 28.022 182 127 3 228 408 316 494 4.92e-16 80.5
MS.gene43563.t1 MTR_7g075610 33.152 184 104 7 228 405 304 474 6.18e-16 80.1
MS.gene43563.t1 MTR_6g008650 25.610 328 213 10 84 400 184 491 6.40e-16 80.1
MS.gene43563.t1 MTR_5g018500 28.655 171 114 5 240 408 4 168 6.93e-16 76.3
MS.gene43563.t1 MTR_4g104610 27.957 186 119 4 217 398 291 465 6.93e-16 80.1
MS.gene43563.t1 MTR_6g017325 26.961 204 131 5 217 417 307 495 7.76e-16 79.7
MS.gene43563.t1 MTR_6g084770 26.728 217 141 7 198 407 273 478 1.59e-15 79.0
MS.gene43563.t1 MTR_1g035660 42.105 76 38 1 85 160 28 97 1.99e-15 73.6
MS.gene43563.t1 MTR_4g018800 26.953 256 170 8 149 400 249 491 2.67e-15 78.2
MS.gene43563.t1 MTR_5g091760 27.027 222 143 7 162 383 230 432 3.43e-15 77.8
MS.gene43563.t1 MTR_4g104570 30.286 175 107 4 228 398 1 164 3.54e-15 74.3
MS.gene43563.t1 MTR_5g070830 29.121 182 115 4 221 398 407 578 3.88e-15 77.8
MS.gene43563.t1 MTR_7g075580 30.380 237 136 9 199 423 278 497 3.89e-15 77.8
MS.gene43563.t1 MTR_1g085680 22.967 418 248 15 6 398 117 485 4.13e-15 77.8
MS.gene43563.t1 MTR_0181s0030 27.481 262 164 9 144 398 224 466 4.56e-15 77.4
MS.gene43563.t1 MTR_6g035115 30.882 204 110 8 214 407 288 470 4.73e-15 77.4
MS.gene43563.t1 MTR_1g107295 25.258 194 138 4 213 406 300 486 5.14e-15 77.4
MS.gene43563.t1 MTR_5g009110 23.565 331 215 10 3 318 125 432 2.22e-14 75.1
MS.gene43563.t1 MTR_4g088400 27.273 264 169 9 149 408 250 494 2.87e-14 75.1
MS.gene43563.t1 MTR_4g104540 29.032 186 117 4 217 398 221 395 3.01e-14 74.7
MS.gene43563.t1 MTR_5g070840 34.426 122 75 2 279 398 21 139 3.38e-14 70.9
MS.gene43563.t1 MTR_0147s0030 22.222 414 274 10 13 415 141 517 3.66e-14 74.7
MS.gene43563.t1 MTR_1g023730 29.189 185 112 7 220 398 304 475 4.19e-14 74.3
MS.gene43563.t1 MTR_4g077210 30.675 163 105 5 221 383 297 451 4.30e-14 74.3
MS.gene43563.t1 MTR_4g088195 24.068 295 202 9 118 402 192 474 4.78e-14 74.3
MS.gene43563.t1 MTR_5g073020 27.692 195 122 7 217 405 292 473 5.20e-14 74.3
MS.gene43563.t1 MTR_1g107300 25.269 186 122 5 226 406 1 174 5.36e-14 71.2
MS.gene43563.t1 MTR_4g088160 22.154 325 217 10 118 428 192 494 5.37e-14 74.3
MS.gene43563.t1 MTR_2g450040 27.624 181 124 4 221 400 308 482 5.79e-14 73.9
MS.gene43563.t1 MTR_8g042060 26.457 223 133 7 206 416 272 475 7.07e-14 73.6
MS.gene43563.t1 MTR_0022s0290 29.609 179 117 5 221 398 310 480 7.41e-14 73.6
MS.gene43563.t1 MTR_3g104560 26.400 250 169 6 183 429 165 402 8.08e-14 73.2
MS.gene43563.t1 MTR_6g084900 23.832 214 153 3 198 407 33 240 8.31e-14 71.6
MS.gene43563.t1 MTR_8g027040 29.518 166 110 5 232 395 348 508 9.16e-14 73.6
MS.gene43563.t1 MTR_8g076290 29.375 160 104 4 221 379 299 450 9.20e-14 73.6
MS.gene43563.t1 MTR_4g088170 22.492 329 213 11 118 428 192 496 9.61e-14 73.6
MS.gene43563.t1 MTR_8g012590 27.885 208 136 5 221 427 293 487 1.08e-13 73.2
MS.gene43563.t1 MTR_5g070710 28.125 192 126 3 210 398 283 465 1.10e-13 73.2
MS.gene43563.t1 MTR_1g091003 27.692 195 124 6 209 398 277 459 1.11e-13 73.2
MS.gene43563.t1 MTR_7g103450 30.612 196 114 7 211 398 300 481 1.18e-13 73.2
MS.gene43563.t1 MTR_3g104560 26.400 250 169 6 183 429 300 537 1.42e-13 72.8
MS.gene43563.t1 MTR_1g015860 28.505 214 142 7 220 429 323 529 1.90e-13 72.4
MS.gene43563.t1 MTR_4g088405 32.161 199 118 5 216 408 221 408 2.11e-13 72.0
MS.gene43563.t1 MTR_3g436390 26.904 197 130 6 209 398 277 466 2.27e-13 72.0
MS.gene43563.t1 MTR_8g008530 21.266 395 266 11 26 410 141 500 2.43e-13 72.0
MS.gene43563.t1 MTR_6g008630 27.749 191 121 4 216 400 222 401 3.52e-13 71.2
MS.gene43563.t1 MTR_6g022450 27.885 208 136 5 221 427 304 498 4.09e-13 71.2
MS.gene43563.t1 MTR_4g113650 26.882 186 129 3 231 416 328 506 4.16e-13 71.6
MS.gene43563.t1 MTR_4g078110 27.461 193 123 5 221 408 271 451 4.40e-13 71.2
MS.gene43563.t1 MTR_8g469360 21.379 435 274 12 3 416 24 411 5.40e-13 70.9
MS.gene43563.t1 MTR_4g026080 27.374 179 121 5 228 405 1 171 6.31e-13 67.8
MS.gene43563.t1 MTR_6g042610 27.143 210 145 5 216 424 305 507 6.96e-13 70.9
MS.gene43563.t1 MTR_3g057910 26.702 191 129 5 217 405 293 474 7.00e-13 70.9
MS.gene43563.t1 MTR_2g061750 27.647 170 107 4 2 158 22 188 7.04e-13 67.8
MS.gene43563.t1 MTR_2g061740 27.647 170 107 4 2 158 22 188 7.17e-13 67.8
MS.gene43563.t1 MTR_4g062500 23.256 258 187 7 154 407 235 485 1.05e-12 70.1
MS.gene43563.t1 MTR_6g004570 37.500 104 59 3 168 266 10 112 1.13e-12 68.2
MS.gene43563.t1 MTR_5g007460 26.901 171 118 3 228 398 277 440 1.19e-12 69.7
MS.gene43563.t1 MTR_4g088425 28.042 189 129 4 221 408 296 478 1.32e-12 69.7
MS.gene43563.t1 MTR_1g037370 29.189 185 113 5 202 379 266 439 1.74e-12 69.3
MS.gene43563.t1 MTR_8g468780 22.156 334 219 13 116 429 130 442 1.89e-12 69.3
MS.gene43563.t1 MTR_5g070700 26.106 226 142 6 180 398 261 468 1.99e-12 69.3
MS.gene43563.t1 MTR_5g009110 22.876 306 200 8 27 318 1 284 2.40e-12 67.8
MS.gene43563.t1 MTR_6g042540 25.962 208 146 5 217 423 305 505 2.42e-12 68.9
MS.gene43563.t1 MTR_1750s0010 29.487 156 95 4 228 379 2 146 2.70e-12 65.1
MS.gene43563.t1 MTR_5g070850 27.568 185 114 4 221 398 297 468 2.79e-12 68.9
MS.gene43563.t1 MTR_3g058210 26.667 180 121 5 221 398 297 467 2.88e-12 68.9
MS.gene43563.t1 MTR_7g092620 25.253 198 122 6 221 408 299 480 3.19e-12 68.6
MS.gene43563.t1 MTR_2g055470 22.353 425 273 14 14 419 120 506 5.14e-12 68.2
MS.gene43563.t1 MTR_7g079440 24.710 259 179 6 5 261 242 486 6.13e-12 67.8
MS.gene43563.t1 MTR_5g094540 26.316 247 147 11 164 398 241 464 8.17e-12 67.4
MS.gene43563.t1 MTR_5g470730 29.323 133 89 1 221 353 297 424 1.03e-11 66.6
MS.gene43563.t1 MTR_4g094775 27.528 178 117 5 221 398 292 457 1.19e-11 67.0
MS.gene43563.t1 MTR_1g103670 22.554 368 245 12 39 398 126 461 1.34e-11 66.6
MS.gene43563.t1 MTR_4g048580 28.205 195 110 8 214 398 290 464 1.59e-11 66.6
MS.gene43563.t1 MTR_2g437840 26.818 220 135 8 171 385 251 449 1.64e-11 66.2
MS.gene43563.t1 MTR_5g070973 29.167 120 84 1 279 398 21 139 1.69e-11 63.2
MS.gene43563.t1 MTR_5g073320 26.667 195 113 8 214 398 291 465 1.73e-11 66.2
MS.gene43563.t1 MTR_7g098550 27.143 140 96 2 278 417 360 493 1.80e-11 66.2
MS.gene43563.t1 MTR_7g098550 27.143 140 96 2 278 417 352 485 1.84e-11 66.2
MS.gene43563.t1 MTR_5g007450 25.234 214 150 4 185 398 258 461 1.86e-11 66.2
MS.gene43563.t1 MTR_2g073480 26.606 218 144 5 185 398 172 377 2.12e-11 65.9
MS.gene43563.t1 MTR_3g020780 26.804 194 129 6 214 404 298 481 2.21e-11 65.9
MS.gene43563.t1 MTR_4g104550 28.333 180 118 4 221 398 286 456 2.84e-11 65.5
MS.gene43563.t1 MTR_5g016440 30.055 183 116 7 217 398 283 454 3.16e-11 65.5
MS.gene43563.t1 MTR_2g073440 26.606 218 144 5 185 398 239 444 3.71e-11 65.1
MS.gene43563.t1 MTR_5g045250 28.235 170 112 6 232 399 324 485 4.46e-11 65.1
MS.gene43563.t1 MTR_4g089025 25.521 192 136 3 217 408 308 492 5.83e-11 64.7
MS.gene43563.t1 MTR_5g056720 26.190 210 125 9 204 398 195 389 6.54e-11 64.3
MS.gene43563.t1 MTR_1g492820 24.870 193 131 5 210 398 299 481 7.51e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43563.t1 AT4G39490 40.909 440 241 6 2 430 87 518 3.39e-119 357
MS.gene43563.t1 AT2G23180 40.553 434 242 6 2 428 88 512 1.16e-118 356
MS.gene43563.t1 AT4G39480 40.181 443 237 6 2 430 87 515 1.15e-117 353
MS.gene43563.t1 AT4G39500 40.230 435 239 6 2 429 47 467 3.64e-116 348
MS.gene43563.t1 AT1G57750 42.326 430 227 8 2 429 87 497 3.95e-116 349
MS.gene43563.t1 AT4G39500 40.230 435 239 6 2 429 97 517 1.78e-115 348
MS.gene43563.t1 AT4G32170 40.278 432 241 6 2 429 86 504 7.83e-112 338
MS.gene43563.t1 AT1G65340 39.252 428 247 4 1 427 87 502 1.35e-108 330
MS.gene43563.t1 AT1G47620 39.723 433 245 7 2 429 95 516 8.24e-107 325
MS.gene43563.t1 AT4G39510 38.747 431 251 5 2 429 86 506 9.65e-105 320
MS.gene43563.t1 AT2G21910 39.261 433 249 7 2 430 86 508 5.44e-104 318
MS.gene43563.t1 AT5G52320 38.785 428 248 5 1 427 87 501 1.37e-103 317
MS.gene43563.t1 AT5G52320 38.534 423 246 5 1 422 87 496 3.01e-101 310
MS.gene43563.t1 AT5G02900 36.782 435 237 9 2 429 77 480 1.52e-91 285
MS.gene43563.t1 AT4G00360 37.156 436 252 8 2 428 89 511 2.72e-89 281
MS.gene43563.t1 AT1G24540 36.613 437 254 9 2 428 97 520 7.26e-89 279
MS.gene43563.t1 AT5G08250 36.854 445 245 13 2 430 56 480 1.79e-88 277
MS.gene43563.t1 AT1G57750 40.896 357 191 7 2 357 87 424 3.69e-88 275
MS.gene43563.t1 AT3G26125 35.811 444 261 7 2 430 100 534 6.36e-88 278
MS.gene43563.t1 AT5G08250 36.854 445 245 13 2 430 118 542 7.36e-88 278
MS.gene43563.t1 AT1G63710 36.406 434 254 8 2 428 89 507 1.01e-87 276
MS.gene43563.t1 AT5G23190 35.080 439 262 8 2 430 117 542 1.00e-86 275
MS.gene43563.t1 AT1G01600 36.591 440 251 9 2 428 89 513 2.95e-85 271
MS.gene43563.t1 AT1G13150 35.601 441 258 9 2 430 93 519 5.44e-85 270
MS.gene43563.t1 AT2G45970 35.650 446 244 10 2 428 89 510 2.38e-84 268
MS.gene43563.t1 AT1G13140 34.545 440 264 8 2 430 100 526 5.82e-84 267
MS.gene43563.t1 AT1G13140 33.257 439 245 9 2 430 100 500 1.06e-79 255
MS.gene43563.t1 AT1G34540 35.529 425 248 11 2 420 84 488 3.25e-79 254
MS.gene43563.t1 AT5G58860 34.396 439 254 8 2 428 92 508 2.70e-77 249
MS.gene43563.t1 AT3G56630 35.797 433 254 11 2 428 84 498 8.33e-77 247
MS.gene43563.t1 AT2G45510 32.864 426 265 9 2 420 88 499 7.75e-75 243
MS.gene43563.t1 AT2G44890 33.021 427 263 11 2 420 88 499 1.28e-72 237
MS.gene43563.t1 AT2G27690 33.949 433 247 13 2 426 83 484 4.82e-70 229
MS.gene43563.t1 AT5G63450 32.037 437 262 10 2 428 91 502 7.37e-69 227
MS.gene43563.t1 AT5G63450 32.037 437 262 10 2 428 149 560 4.23e-68 226
MS.gene43563.t1 AT2G44890 31.221 426 254 10 2 420 88 481 8.68e-68 224
MS.gene43563.t1 AT3G01900 32.802 439 250 14 2 428 85 490 4.45e-67 222
MS.gene43563.t1 AT3G48520 30.909 440 266 11 1 429 88 500 8.46e-66 219
MS.gene43563.t1 AT1G69500 31.209 455 280 9 1 429 77 524 1.67e-61 208
MS.gene43563.t1 AT1G31800 23.908 435 298 13 3 429 161 570 1.31e-24 107
MS.gene43563.t1 AT5G51900 26.821 302 152 7 135 429 1 240 5.60e-24 100
MS.gene43563.t1 AT3G53130 24.480 433 286 16 9 428 135 539 6.51e-22 98.6
MS.gene43563.t1 AT3G48300 24.806 387 246 17 39 417 121 470 1.96e-17 84.7
MS.gene43563.t1 AT3G48300 24.806 387 246 17 39 417 123 472 1.98e-17 84.7
MS.gene43563.t1 AT2G26710 23.020 404 282 9 14 416 127 502 2.93e-17 84.3
MS.gene43563.t1 AT5G24900 29.048 210 131 6 218 418 207 407 2.95e-17 83.6
MS.gene43563.t1 AT1G64940 27.074 229 162 3 180 408 262 485 3.55e-17 84.0
MS.gene43563.t1 AT5G06900 31.683 202 110 8 212 402 281 465 5.00e-17 83.6
MS.gene43563.t1 AT3G48270 25.628 199 130 4 217 407 277 465 6.81e-17 83.2
MS.gene43563.t1 AT5G24900 29.048 210 131 6 218 418 324 524 7.11e-17 83.2
MS.gene43563.t1 AT5G52400 28.889 225 135 6 200 417 301 507 1.35e-16 82.4
MS.gene43563.t1 AT3G25180 30.208 192 119 5 221 408 303 483 1.55e-16 82.0
MS.gene43563.t1 AT3G61040 30.688 189 123 4 211 398 279 460 2.22e-16 81.6
MS.gene43563.t1 AT5G35715 30.688 189 115 5 224 408 234 410 2.31e-16 81.3
MS.gene43563.t1 AT3G14640 23.040 421 269 13 14 416 118 501 2.56e-16 81.3
MS.gene43563.t1 AT3G14640 23.005 426 263 14 14 416 140 523 2.66e-16 81.3
MS.gene43563.t1 AT2G45570 27.948 229 154 5 170 398 255 472 5.09e-16 80.5
MS.gene43563.t1 AT4G27710 26.860 242 163 5 175 410 265 498 5.11e-16 80.5
MS.gene43563.t1 AT2G46950 23.358 411 266 10 3 402 171 543 5.34e-16 80.5
MS.gene43563.t1 AT2G46960 24.941 421 234 16 8 399 3 370 6.18e-16 79.7
MS.gene43563.t1 AT2G45560 25.000 384 241 17 36 405 128 478 7.22e-16 80.1
MS.gene43563.t1 AT1G33730 28.807 243 147 9 170 405 119 342 8.38e-16 79.0
MS.gene43563.t1 AT1G33730 28.807 243 147 9 170 405 119 342 8.38e-16 79.0
MS.gene43563.t1 AT2G46960 25.056 447 251 18 8 423 119 512 9.78e-16 79.7
MS.gene43563.t1 AT5G24910 28.054 221 141 6 207 418 318 529 1.48e-15 79.0
MS.gene43563.t1 AT4G13310 24.011 379 249 13 39 408 124 472 1.59e-15 79.0
MS.gene43563.t1 AT3G26320 25.526 380 222 15 39 398 123 461 1.69e-15 79.0
MS.gene43563.t1 AT2G30770 28.182 220 149 5 186 405 257 467 1.82e-15 78.6
MS.gene43563.t1 AT2G27000 24.324 370 242 13 39 398 132 473 1.91e-15 78.6
MS.gene43563.t1 AT4G13770 22.222 342 226 9 75 405 158 470 3.30e-15 77.8
MS.gene43563.t1 AT1G64950 25.410 244 175 3 167 408 246 484 3.65e-15 77.8
MS.gene43563.t1 AT2G12190 25.203 246 175 4 167 408 246 486 4.88e-15 77.4
MS.gene43563.t1 AT3G26830 29.825 171 114 3 228 398 297 461 6.17e-15 77.0
MS.gene43563.t1 AT3G03470 27.536 207 142 4 206 408 283 485 9.62e-15 76.6
MS.gene43563.t1 AT4G13290 29.570 186 116 5 228 408 290 465 1.38e-14 75.9
MS.gene43563.t1 AT3G20940 27.888 251 147 9 175 408 252 485 1.59e-14 75.9
MS.gene43563.t1 AT3G48280 25.714 210 149 3 190 398 249 452 2.37e-14 75.1
MS.gene43563.t1 AT5G57260 29.004 231 144 6 186 408 256 474 5.90e-14 73.9
MS.gene43563.t1 AT3G14630 25.185 405 242 17 11 398 172 532 7.09e-14 73.9
MS.gene43563.t1 AT3G14630 25.185 405 242 17 11 398 117 477 7.41e-14 73.9
MS.gene43563.t1 AT3G26330 28.311 219 134 6 198 408 268 471 9.95e-14 73.2
MS.gene43563.t1 AT5G24950 23.562 365 246 11 39 398 124 460 9.95e-14 73.2
MS.gene43563.t1 AT4G31950 28.421 190 128 4 221 408 299 482 1.18e-13 73.2
MS.gene43563.t1 AT4G31940 28.649 185 124 4 221 403 311 489 1.38e-13 73.2
MS.gene43563.t1 AT5G05260 21.483 391 270 13 32 407 129 497 1.40e-13 72.8
MS.gene43563.t1 AT1G64930 26.442 208 146 4 203 408 283 485 1.72e-13 72.8
MS.gene43563.t1 AT1G33720 28.947 190 120 7 220 405 193 371 4.54e-13 70.9
MS.gene43563.t1 AT3G20950 29.648 199 109 8 204 387 286 468 4.85e-13 71.2
MS.gene43563.t1 AT5G07990 26.761 213 142 6 201 410 275 476 4.91e-13 71.2
MS.gene43563.t1 AT2G45550 27.660 235 146 8 170 398 255 471 5.02e-13 71.2
MS.gene43563.t1 AT3G20080 30.317 221 139 8 173 385 113 326 6.87e-13 70.1
MS.gene43563.t1 AT3G20080 30.317 221 139 8 173 385 113 326 6.87e-13 70.1
MS.gene43563.t1 AT3G20080 30.317 221 139 8 173 385 113 326 6.87e-13 70.1
MS.gene43563.t1 AT3G20080 30.317 221 139 8 173 385 113 326 6.87e-13 70.1
MS.gene43563.t1 AT3G26210 22.606 376 263 13 38 408 122 474 1.03e-12 70.1
MS.gene43563.t1 AT3G52970 29.469 207 127 6 200 398 282 477 1.08e-12 70.1
MS.gene43563.t1 AT3G52970 29.469 207 127 6 200 398 296 491 1.09e-12 70.1
MS.gene43563.t1 AT4G31970 26.316 209 144 6 198 403 287 488 1.10e-12 70.1
MS.gene43563.t1 AT3G20080 30.317 221 139 8 173 385 250 463 1.34e-12 70.1
MS.gene43563.t1 AT3G20080 30.317 221 139 8 173 385 250 463 1.34e-12 70.1
MS.gene43563.t1 AT5G47990 25.681 257 148 12 173 408 250 484 2.12e-12 69.3
MS.gene43563.t1 AT1G50560 28.492 179 109 6 228 398 312 479 2.71e-12 68.9
MS.gene43563.t1 AT4G37400 25.172 290 186 7 123 408 204 466 2.87e-12 68.9
MS.gene43563.t1 AT2G30750 27.751 209 139 5 190 398 264 460 3.55e-12 68.6
MS.gene43563.t1 AT1G13080 21.231 325 232 6 85 405 50 354 3.65e-12 68.2
MS.gene43563.t1 AT3G26160 24.675 231 158 6 181 407 256 474 3.68e-12 68.6
MS.gene43563.t1 AT4G39950 25.532 188 133 4 221 407 366 547 3.71e-12 68.6
MS.gene43563.t1 AT3G48310 23.077 195 132 4 221 407 282 466 3.73e-12 68.6
MS.gene43563.t1 AT4G39950 25.532 188 133 4 221 407 326 507 3.94e-12 68.6
MS.gene43563.t1 AT2G22330 26.667 180 125 4 221 399 328 501 3.99e-12 68.6
MS.gene43563.t1 AT2G22330 26.667 180 125 4 221 399 351 524 4.27e-12 68.6
MS.gene43563.t1 AT3G26300 28.111 217 137 6 198 408 268 471 4.42e-12 68.2
MS.gene43563.t1 AT1G13080 21.231 325 232 6 85 405 168 472 4.60e-12 68.2
MS.gene43563.t1 AT3G20100 34.783 115 59 4 280 385 355 462 5.65e-12 67.8
MS.gene43563.t1 AT1G67110 30.282 142 92 3 277 417 363 498 6.11e-12 67.8
MS.gene43563.t1 AT3G26180 25.108 231 152 7 182 407 126 340 7.89e-12 67.0
MS.gene43563.t1 AT3G26270 29.143 175 110 5 228 398 302 466 9.68e-12 67.0
MS.gene43563.t1 AT2G42850 29.240 171 111 5 217 387 282 442 1.03e-11 67.0
MS.gene43563.t1 AT5G38450 29.577 142 93 3 277 417 369 504 1.18e-11 67.0
MS.gene43563.t1 AT1G13090 22.159 352 234 13 58 398 139 461 1.24e-11 66.6
MS.gene43563.t1 AT3G20090 29.310 174 103 7 220 385 164 325 1.24e-11 66.2
MS.gene43563.t1 AT3G20130 27.638 199 113 9 215 398 261 443 1.34e-11 66.6
MS.gene43563.t1 AT3G26180 25.108 231 152 7 182 407 260 474 1.59e-11 66.6
MS.gene43563.t1 AT3G20130 27.638 199 113 9 215 398 289 471 1.75e-11 66.2
MS.gene43563.t1 AT3G48290 25.595 168 111 3 235 398 297 454 2.27e-11 65.9
MS.gene43563.t1 AT3G28740 27.919 197 122 5 221 413 298 478 2.38e-11 65.9
MS.gene43563.t1 AT1G13100 21.595 301 222 9 98 398 175 461 2.51e-11 65.9
MS.gene43563.t1 AT4G37340 26.882 186 116 5 217 398 286 455 2.70e-11 65.9
MS.gene43563.t1 AT3G48290 25.595 168 111 3 235 398 323 480 2.72e-11 65.9
MS.gene43563.t1 AT3G20960 29.570 186 105 8 214 385 185 358 3.09e-11 65.5
MS.gene43563.t1 AT4G37320 25.714 210 128 6 221 418 290 483 3.11e-11 65.5
MS.gene43563.t1 AT3G20090 27.523 218 124 8 181 385 267 463 3.57e-11 65.5
MS.gene43563.t1 AT3G26310 29.032 217 135 7 198 408 267 470 3.78e-11 65.5
MS.gene43563.t1 AT3G26170 25.000 176 121 4 236 407 306 474 4.49e-11 65.1
MS.gene43563.t1 AT4G15360 29.565 230 136 10 170 385 242 459 4.98e-11 65.1
MS.gene43563.t1 AT1G66540 27.861 201 124 7 221 412 118 306 5.20e-11 63.9
MS.gene43563.t1 AT3G26150 22.174 230 160 6 182 407 260 474 5.86e-11 64.7
MS.gene43563.t1 AT2G23220 28.070 171 111 4 228 398 312 470 6.10e-11 64.7
MS.gene43563.t1 AT4G37310 26.000 200 139 5 211 408 285 477 6.52e-11 64.7
MS.gene43563.t1 AT1G66540 27.861 201 124 7 221 412 177 365 7.94e-11 63.9

Find 84 sgRNAs with CRISPR-Local

Find 93 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTAGCTTCCAAATACATTT+TGG 0.169115 1.2:+21179452 None:intergenic
ACTCTATTCCAAAATGTATT+TGG 0.217171 1.2:-21179460 MS.gene43563:CDS
TAGCTTTATTCAAATGAAAA+TGG 0.239889 1.2:-21178727 MS.gene43563:CDS
CCTGAAATTTGTGAGGTTCT+TGG 0.246979 1.2:-21179812 MS.gene43563:CDS
CAGGTTTAAGTTGGTTCTTT+TGG 0.255706 1.2:-21179160 MS.gene43563:CDS
CCTTTCTTGTTTCCATTCAT+TGG 0.269857 1.2:+21179766 None:intergenic
TGGGAAGAATGGAACATATA+TGG 0.270918 1.2:-21178875 MS.gene43563:CDS
TGGTTGCAGCTTCTGTATTA+TGG 0.274918 1.2:-21178707 MS.gene43563:CDS
CCAAGAACCTCACAAATTTC+AGG 0.307867 1.2:+21179812 None:intergenic
TGGTGTTGGTATTGTAAATC+TGG 0.316721 1.2:-21179792 MS.gene43563:CDS
AAATTGTAAGGAAGACAATT+AGG 0.319190 1.2:+21179551 None:intergenic
CATGATCAAGAAATGGTAAT+AGG 0.333566 1.2:+21179663 None:intergenic
ACTCTCTTGGCTGCAGGAAA+TGG 0.340045 1.2:-21179194 MS.gene43563:CDS
GTCTGTTACTCCTAGGGTTT+CGG 0.344650 1.2:-21178655 MS.gene43563:CDS
TTAAGGTCAATGTCAGTAAA+AGG 0.348269 1.2:-21178611 MS.gene43563:CDS
TCTTCGTGTGGAAGGCCTTA+AGG 0.403897 1.2:-21178628 MS.gene43563:CDS
CGAAGCTCATTGAAATTGTA+AGG 0.412721 1.2:+21179539 None:intergenic
GGGAAGAATGGAACATATAT+GGG 0.414799 1.2:-21178874 MS.gene43563:CDS
ATATACTCTTTGTATGCAAT+GGG 0.431491 1.2:-21178894 MS.gene43563:CDS
TTTGATGCATGATCAAGAAA+TGG 0.431859 1.2:+21179656 None:intergenic
GGAAATGGAACAGTTAGTTC+AGG 0.432867 1.2:-21179179 MS.gene43563:CDS
AATATACTCTTTGTATGCAA+TGG 0.441929 1.2:-21178895 MS.gene43563:CDS
TTCTTCATTCATTGCTCAAA+GGG 0.443596 1.2:-21179739 MS.gene43563:CDS
AAGGTCAGTCTGTTACTCCT+AGG 0.448908 1.2:-21178662 MS.gene43563:CDS
TTGAGGATACGTTATTGTAT+AGG 0.454660 1.2:-21179484 MS.gene43563:CDS
TTTCTTGATCATGCATCAAA+AGG 0.454841 1.2:-21179653 MS.gene43563:CDS
AATTTCAGCAACATCTTCAC+TGG 0.454996 1.2:+21179310 None:intergenic
TCTTTCCCAAGACAACTTCT+CGG 0.456845 1.2:+21178753 None:intergenic
GAGAGGTGGATATCAGATAA+AGG 0.457669 1.2:-21178825 MS.gene43563:CDS
AAAAGCTATTTCTGTGATTG+AGG 0.458434 1.2:-21179501 MS.gene43563:CDS
ATTTGTGAGGTTCTTGGTGT+TGG 0.458624 1.2:-21179806 MS.gene43563:CDS
CAGTTAGTTCAGGTTTAAGT+TGG 0.458636 1.2:-21179169 MS.gene43563:CDS
AGCACTAATGAAGGAAGGCT+TGG 0.460222 1.2:-21179267 MS.gene43563:CDS
TAAATCTGGATTCCAATGAA+TGG 0.467578 1.2:-21179778 MS.gene43563:CDS
TTATCTGATATCCACCTCTC+AGG 0.472868 1.2:+21178828 None:intergenic
AGGTAGTATATCAGAATTAA+CGG 0.475132 1.2:+21178950 None:intergenic
ACGGCACACTTGTGATCAAA+TGG 0.479295 1.2:+21178969 None:intergenic
CTTGTTAAAAGCACTAATGA+AGG 0.479605 1.2:-21179276 MS.gene43563:CDS
TTTGTATGCAATGGGAAGAA+TGG 0.480259 1.2:-21178886 MS.gene43563:CDS
GCATTCACTCTCTTGGCTGC+AGG 0.480882 1.2:-21179200 MS.gene43563:CDS
CTACAGAAATGGCTACATAT+TGG 0.482966 1.2:-21179434 MS.gene43563:CDS
TCGGTGGTTCTTCGTGTGGA+AGG 0.485372 1.2:-21178636 MS.gene43563:CDS
AGGTCAGTCTGTTACTCCTA+GGG 0.487036 1.2:-21178661 MS.gene43563:CDS
GTATTTGGAAGCTACAGAAA+TGG 0.496601 1.2:-21179445 MS.gene43563:CDS
AGACACTGCATTCACTCTCT+TGG 0.498225 1.2:-21179207 MS.gene43563:CDS
CAGGTCCGAGAAGTTGTCTT+GGG 0.506504 1.2:-21178758 MS.gene43563:CDS
TTTGATCAATAATTTAAATG+TGG 0.507770 1.2:-21179060 MS.gene43563:CDS
GGTAATGTGATGCACATTCA+TGG 0.508681 1.2:+21179874 None:intergenic
CACTTGTGATCAAATGGTAT+AGG 0.512698 1.2:+21178975 None:intergenic
ATTCTTCATTCATTGCTCAA+AGG 0.513776 1.2:-21179740 MS.gene43563:CDS
CCAATGAATGGAAACAAGAA+AGG 0.515777 1.2:-21179766 MS.gene43563:CDS
CAAGAACCTCACAAATTTCA+GGG 0.516557 1.2:+21179813 None:intergenic
GCACTAATGAAGGAAGGCTT+GGG 0.521386 1.2:-21179266 MS.gene43563:CDS
GCAGGTCCGAGAAGTTGTCT+TGG 0.524190 1.2:-21178759 MS.gene43563:CDS
TGTTTCAACTCATCCTATTG+TGG 0.531424 1.2:-21179135 MS.gene43563:CDS
GTTGCTGAAATTCAACCTGT+TGG 0.540232 1.2:-21179299 MS.gene43563:CDS
TTAAAAGCACTAATGAAGGA+AGG 0.545279 1.2:-21179272 MS.gene43563:CDS
AATTTCAGCAATTATGGGAA+AGG 0.545464 1.2:-21179845 MS.gene43563:CDS
GGACCAACATGGTGTCCACT+AGG 0.550389 1.2:+21178930 None:intergenic
TTGTGATCAAATGGTATAGG+AGG 0.568006 1.2:+21178978 None:intergenic
TTTCACATATAGTTGCATGA+AGG 0.568354 1.2:+21179015 None:intergenic
AAGTTCATAGCATTCAATGC+AGG 0.568382 1.2:-21178777 MS.gene43563:CDS
AATGGAACATATATGGGGTG+AGG 0.572205 1.2:-21178868 MS.gene43563:CDS
TATATGGGGTGAGGATTGCA+TGG 0.572222 1.2:-21178859 MS.gene43563:CDS
CGAAGAACCACCGAAACCCT+AGG 0.580817 1.2:+21178645 None:intergenic
AAAATTACAAGTAATATCAA+AGG 0.586703 1.2:+21179589 None:intergenic
GGTTTCGGTGGTTCTTCGTG+TGG 0.590143 1.2:-21178640 MS.gene43563:CDS
TGTTACTCCTAGGGTTTCGG+TGG 0.593212 1.2:-21178652 MS.gene43563:CDS
AGATAATTGTCTAACACAAG+AGG 0.595608 1.2:-21179087 MS.gene43563:CDS
TGATTTCCCTGAAATTTGTG+AGG 0.604059 1.2:-21179819 MS.gene43563:CDS
AATGAAGGAAGGCTTGGGAA+AGG 0.606719 1.2:-21179261 MS.gene43563:CDS
TTTCGCATACATGTGGTGGA+AGG 0.615060 1.2:-21178681 MS.gene43563:CDS
AATGCTATGAACTTGTAAGA+TGG 0.616748 1.2:+21178786 None:intergenic
CAACTATATGTGAAACCTTG+AGG 0.626978 1.2:-21179007 MS.gene43563:CDS
CTACCTAGTGGACACCATGT+TGG 0.639917 1.2:-21178933 MS.gene43563:CDS
ATTTACAAGATATTATTGAG+AGG 0.643910 1.2:-21179616 MS.gene43563:CDS
GCATGGAGTTTAAGCCTGAG+AGG 0.648732 1.2:-21178842 MS.gene43563:CDS
GGAAGAATGGAACATATATG+GGG 0.649155 1.2:-21178873 MS.gene43563:CDS
GTAATGTGATGCACATTCAT+GGG 0.653987 1.2:+21179875 None:intergenic
GATGTTTCGCATACATGTGG+TGG 0.655606 1.2:-21178685 MS.gene43563:CDS
TGGAGTTTAAGCCTGAGAGG+TGG 0.661077 1.2:-21178839 MS.gene43563:CDS
ATGGATGTTTCGCATACATG+TGG 0.674390 1.2:-21178688 MS.gene43563:CDS
TATAGGAGGATAAAGCCTCA+AGG 0.678511 1.2:+21178992 None:intergenic
AATTCTGATATACTACCTAG+TGG 0.684580 1.2:-21178945 MS.gene43563:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTACTTGTAATTTTTTATT+TGG - chr1.2:21178893-21178912 MS.gene43563:CDS 10.0%
!! AAAATTACAAGTAATATCAA+AGG + chr1.2:21178888-21178907 None:intergenic 15.0%
!! TTTGATCAATAATTTAAATG+TGG - chr1.2:21179414-21179433 MS.gene43563:CDS 15.0%
!! ATTTACAAGATATTATTGAG+AGG - chr1.2:21178858-21178877 MS.gene43563:CDS 20.0%
!!! GAGTATATTAACTTTGTTTT+TGG + chr1.2:21179568-21179587 None:intergenic 20.0%
!!! TAGCTTTATTCAAATGAAAA+TGG - chr1.2:21179747-21179766 MS.gene43563:CDS 20.0%
! AAATTGTAAGGAAGACAATT+AGG + chr1.2:21178926-21178945 None:intergenic 25.0%
! AATATACTCTTTGTATGCAA+TGG - chr1.2:21179579-21179598 MS.gene43563:CDS 25.0%
! ACTCTATTCCAAAATGTATT+TGG - chr1.2:21179014-21179033 MS.gene43563:CDS 25.0%
! AGCAAAAATTTCAGCAATTA+TGG - chr1.2:21178623-21178642 MS.gene43563:CDS 25.0%
! AGGTAGTATATCAGAATTAA+CGG + chr1.2:21179527-21179546 None:intergenic 25.0%
! ATATACTCTTTGTATGCAAT+GGG - chr1.2:21179580-21179599 MS.gene43563:CDS 25.0%
! GCAAAAATTTCAGCAATTAT+GGG - chr1.2:21178624-21178643 MS.gene43563:CDS 25.0%
!! ATAATTGCTGAAATTTTTGC+TGG + chr1.2:21178624-21178643 None:intergenic 25.0%
AATGCTATGAACTTGTAAGA+TGG + chr1.2:21179691-21179710 None:intergenic 30.0%
AATTCTGATATACTACCTAG+TGG - chr1.2:21179529-21179548 MS.gene43563:CDS 30.0%
AATTTCAGCAATTATGGGAA+AGG - chr1.2:21178629-21178648 MS.gene43563:CDS 30.0%
AGATAATTGTCTAACACAAG+AGG - chr1.2:21179387-21179406 MS.gene43563:CDS 30.0%
ATTCTTCATTCATTGCTCAA+AGG - chr1.2:21178734-21178753 MS.gene43563:CDS 30.0%
CATGATCAAGAAATGGTAAT+AGG + chr1.2:21178814-21178833 None:intergenic 30.0%
TAAATCTGGATTCCAATGAA+TGG - chr1.2:21178696-21178715 MS.gene43563:CDS 30.0%
TTAAGGTCAATGTCAGTAAA+AGG - chr1.2:21179863-21179882 MS.gene43563:CDS 30.0%
TTCTTCATTCATTGCTCAAA+GGG - chr1.2:21178735-21178754 MS.gene43563:CDS 30.0%
TTGAGGATACGTTATTGTAT+AGG - chr1.2:21178990-21179009 MS.gene43563:CDS 30.0%
TTTCACATATAGTTGCATGA+AGG + chr1.2:21179462-21179481 None:intergenic 30.0%
TTTCTTGATCATGCATCAAA+AGG - chr1.2:21178821-21178840 MS.gene43563:CDS 30.0%
TTTGATGCATGATCAAGAAA+TGG + chr1.2:21178821-21178840 None:intergenic 30.0%
! ATAAGTTTTGCTTCCACAAT+AGG + chr1.2:21179355-21179374 None:intergenic 30.0%
! CTTTTGAATGTTTTGTCGAA+GGG + chr1.2:21178777-21178796 None:intergenic 30.0%
! TCTTTTGAATGTTTTGTCGA+AGG + chr1.2:21178778-21178797 None:intergenic 30.0%
! TGTAGCTTCCAAATACATTT+TGG + chr1.2:21179025-21179044 None:intergenic 30.0%
! TTTTACTGACATTGACCTTA+AGG + chr1.2:21179864-21179883 None:intergenic 30.0%
!! AAAAGCTATTTCTGTGATTG+AGG - chr1.2:21178973-21178992 MS.gene43563:CDS 30.0%
!! CTTGTTAAAAGCACTAATGA+AGG - chr1.2:21179198-21179217 MS.gene43563:CDS 30.0%
!! TTAAAAGCACTAATGAAGGA+AGG - chr1.2:21179202-21179221 MS.gene43563:CDS 30.0%
AAGTTCATAGCATTCAATGC+AGG - chr1.2:21179697-21179716 MS.gene43563:CDS 35.0%
AATTTCAGCAACATCTTCAC+TGG + chr1.2:21179167-21179186 None:intergenic 35.0%
CAACTATATGTGAAACCTTG+AGG - chr1.2:21179467-21179486 MS.gene43563:CDS 35.0%
CAAGAACCTCACAAATTTCA+GGG + chr1.2:21178664-21178683 None:intergenic 35.0%
CACTTGTGATCAAATGGTAT+AGG + chr1.2:21179502-21179521 None:intergenic 35.0%
CCAATGAATGGAAACAAGAA+AGG - chr1.2:21178708-21178727 MS.gene43563:CDS 35.0%
CGAAGCTCATTGAAATTGTA+AGG + chr1.2:21178938-21178957 None:intergenic 35.0%
CTACAGAAATGGCTACATAT+TGG - chr1.2:21179040-21179059 MS.gene43563:CDS 35.0%
GGAAGAATGGAACATATATG+GGG - chr1.2:21179601-21179620 MS.gene43563:CDS 35.0%
GGGAAGAATGGAACATATAT+GGG - chr1.2:21179600-21179619 MS.gene43563:CDS 35.0%
GTATTTGGAAGCTACAGAAA+TGG - chr1.2:21179029-21179048 MS.gene43563:CDS 35.0%
TGATTTCCCTGAAATTTGTG+AGG - chr1.2:21178655-21178674 MS.gene43563:CDS 35.0%
TGGGAAGAATGGAACATATA+TGG - chr1.2:21179599-21179618 MS.gene43563:CDS 35.0%
TGTTTCAACTCATCCTATTG+TGG - chr1.2:21179339-21179358 MS.gene43563:CDS 35.0%
TTGTGATCAAATGGTATAGG+AGG + chr1.2:21179499-21179518 None:intergenic 35.0%
TTTGTATGCAATGGGAAGAA+TGG - chr1.2:21179588-21179607 MS.gene43563:CDS 35.0%
! CAGTTAGTTCAGGTTTAAGT+TGG - chr1.2:21179305-21179324 MS.gene43563:CDS 35.0%
! CCTTTCTTGTTTCCATTCAT+TGG + chr1.2:21178711-21178730 None:intergenic 35.0%
!! TGGTGTTGGTATTGTAAATC+TGG - chr1.2:21178682-21178701 MS.gene43563:CDS 35.0%
!!! ACTTTGTTTTTGGACCAACA+TGG + chr1.2:21179558-21179577 None:intergenic 35.0%
!!! CAGGTTTAAGTTGGTTCTTT+TGG - chr1.2:21179314-21179333 MS.gene43563:CDS 35.0%
AATGGAACATATATGGGGTG+AGG - chr1.2:21179606-21179625 MS.gene43563:CDS 40.0%
ATGGATGTTTCGCATACATG+TGG - chr1.2:21179786-21179805 MS.gene43563:CDS 40.0%
CCAAGAACCTCACAAATTTC+AGG + chr1.2:21178665-21178684 None:intergenic 40.0%
CCTGAAATTTGTGAGGTTCT+TGG - chr1.2:21178662-21178681 MS.gene43563:CDS 40.0%
GAGAGGTGGATATCAGATAA+AGG - chr1.2:21179649-21179668 MS.gene43563:CDS 40.0%
GGAAATGGAACAGTTAGTTC+AGG - chr1.2:21179295-21179314 MS.gene43563:CDS 40.0%
GTTGCTGAAATTCAACCTGT+TGG - chr1.2:21179175-21179194 MS.gene43563:CDS 40.0%
TATAGGAGGATAAAGCCTCA+AGG + chr1.2:21179485-21179504 None:intergenic 40.0%
TCTTTCCCAAGACAACTTCT+CGG + chr1.2:21179724-21179743 None:intergenic 40.0%
TGGTTGCAGCTTCTGTATTA+TGG - chr1.2:21179767-21179786 MS.gene43563:CDS 40.0%
TTATCTGATATCCACCTCTC+AGG + chr1.2:21179649-21179668 None:intergenic 40.0%
! AGTGCTTTTAACAAGCCAAC+AGG + chr1.2:21179193-21179212 None:intergenic 40.0%
! ATTTGTGAGGTTCTTGGTGT+TGG - chr1.2:21178668-21178687 MS.gene43563:CDS 40.0%
AAGGTCAGTCTGTTACTCCT+AGG - chr1.2:21179812-21179831 MS.gene43563:CDS 45.0%
AATGAAGGAAGGCTTGGGAA+AGG - chr1.2:21179213-21179232 MS.gene43563:CDS 45.0%
ACGGCACACTTGTGATCAAA+TGG + chr1.2:21179508-21179527 None:intergenic 45.0%
AGACACTGCATTCACTCTCT+TGG - chr1.2:21179267-21179286 MS.gene43563:CDS 45.0%
AGCACTAATGAAGGAAGGCT+TGG - chr1.2:21179207-21179226 MS.gene43563:CDS 45.0%
AGGTCAGTCTGTTACTCCTA+GGG - chr1.2:21179813-21179832 MS.gene43563:CDS 45.0%
GATGTTTCGCATACATGTGG+TGG - chr1.2:21179789-21179808 MS.gene43563:CDS 45.0%
GCACTAATGAAGGAAGGCTT+GGG - chr1.2:21179208-21179227 MS.gene43563:CDS 45.0%
GTCTGTTACTCCTAGGGTTT+CGG - chr1.2:21179819-21179838 MS.gene43563:CDS 45.0%
TATATGGGGTGAGGATTGCA+TGG - chr1.2:21179615-21179634 MS.gene43563:CDS 45.0%
! TTTCGCATACATGTGGTGGA+AGG - chr1.2:21179793-21179812 MS.gene43563:CDS 45.0%
ACTCTCTTGGCTGCAGGAAA+TGG - chr1.2:21179280-21179299 MS.gene43563:CDS 50.0%
CAGGTCCGAGAAGTTGTCTT+GGG - chr1.2:21179716-21179735 MS.gene43563:CDS 50.0%
GCATGGAGTTTAAGCCTGAG+AGG - chr1.2:21179632-21179651 MS.gene43563:CDS 50.0%
TCTTCGTGTGGAAGGCCTTA+AGG - chr1.2:21179846-21179865 MS.gene43563:CDS 50.0%
TGGAGTTTAAGCCTGAGAGG+TGG - chr1.2:21179635-21179654 MS.gene43563:CDS 50.0%
TGTTACTCCTAGGGTTTCGG+TGG - chr1.2:21179822-21179841 MS.gene43563:CDS 50.0%
! CTACCTAGTGGACACCATGT+TGG - chr1.2:21179541-21179560 MS.gene43563:CDS 50.0%
CGAAGAACCACCGAAACCCT+AGG + chr1.2:21179832-21179851 None:intergenic 55.0%
GCAGGTCCGAGAAGTTGTCT+TGG - chr1.2:21179715-21179734 MS.gene43563:CDS 55.0%
GCATTCACTCTCTTGGCTGC+AGG - chr1.2:21179274-21179293 MS.gene43563:CDS 55.0%
GGACCAACATGGTGTCCACT+AGG + chr1.2:21179547-21179566 None:intergenic 55.0%
GGTTTCGGTGGTTCTTCGTG+TGG - chr1.2:21179834-21179853 MS.gene43563:CDS 55.0%
TCGGTGGTTCTTCGTGTGGA+AGG - chr1.2:21179838-21179857 MS.gene43563:CDS 55.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 21178602 21179894 21178602 ID=MS.gene43563
chr1.2 mRNA 21178602 21179894 21178602 ID=MS.gene43563.t1;Parent=MS.gene43563
chr1.2 exon 21178602 21179894 21178602 ID=MS.gene43563.t1.exon1;Parent=MS.gene43563.t1
chr1.2 CDS 21178602 21179894 21178602 ID=cds.MS.gene43563.t1;Parent=MS.gene43563.t1
Gene Sequence

>MS.gene43563

ATGAATGTGCATCACATTACCAGCAAAAATTTCAGCAATTATGGGAAAGGATCTGATTTCCCTGAAATTTGTGAGGTTCTTGGTGTTGGTATTGTAAATCTGGATTCCAATGAATGGAAACAAGAAAGGACTATTCTTCATTCATTGCTCAAAGGGAAAATTTTTGAGACATCCCTTCGACAAAACATTCAAAAGAAGATAGAGAGTTGCCTATTACCATTTCTTGATCATGCATCAAAAGGTGTACACGTACTTGATTTACAAGATATTATTGAGAGGTTCACCTTTGATATTACTTGTAATTTTTTATTTGGATTTGATCCTAATTGTCTTCCTTACAATTTCAATGAGCTTCGAGAGATTGATTATGTAAAAGCTATTTCTGTGATTGAGGATACGTTATTGTATAGGCACTCTATTCCAAAATGTATTTGGAAGCTACAGAAATGGCTACATATTGGTCAAGAGAAGAAGAACAGTATAGCTCAAGAAAATATTCATCAATTCTTGTTCAAAATGATAATGCATTCGAAATATGATGAAGATAAAAGTAGATTAAAAACCAGTGAAGATGTTGCTGAAATTCAACCTGTTGGCTTGTTAAAAGCACTAATGAAGGAAGGCTTGGGAAAGGAAGAAACGAATGAAAATGAAAAGTATATTAGAGACACTGCATTCACTCTCTTGGCTGCAGGAAATGGAACAGTTAGTTCAGGTTTAAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTGGAAGCAAAACTTATTCAAGAGATCAAAGATAATTGTCTAACACAAGAGGAGAATTTGATCAATAATTTAAATGTGGAAAATATTGATAAGCTTGTTTACCTTCATGCAACTATATGTGAAACCTTGAGGCTTTATCCTCCTATACCATTTGATCACAAGTGTGCCGTTAATTCTGATATACTACCTAGTGGACACCATGTTGGTCCAAAAACAAAGTTAATATACTCTTTGTATGCAATGGGAAGAATGGAACATATATGGGGTGAGGATTGCATGGAGTTTAAGCCTGAGAGGTGGATATCAGATAAAGGACAAATTATACATATACCATCTTACAAGTTCATAGCATTCAATGCAGGTCCGAGAAGTTGTCTTGGGAAAGATATTAGCTTTATTCAAATGAAAATGGTTGCAGCTTCTGTATTATGGATGTTTCGCATACATGTGGTGGAAGGTCAGTCTGTTACTCCTAGGGTTTCGGTGGTTCTTCGTGTGGAAGGCCTTAAGGTCAATGTCAGTAAAAGGTGCATCTGA

Protein sequence

>MS.gene43563.t1

MNVHHITSKNFSNYGKGSDFPEICEVLGVGIVNLDSNEWKQERTILHSLLKGKIFETSLRQNIQKKIESCLLPFLDHASKGVHVLDLQDIIERFTFDITCNFLFGFDPNCLPYNFNELREIDYVKAISVIEDTLLYRHSIPKCIWKLQKWLHIGQEKKNSIAQENIHQFLFKMIMHSKYDEDKSRLKTSEDVAEIQPVGLLKALMKEGLGKEETNENEKYIRDTAFTLLAAGNGTVSSGLSWFFWLVSTHPIVEAKLIQEIKDNCLTQEENLINNLNVENIDKLVYLHATICETLRLYPPIPFDHKCAVNSDILPSGHHVGPKTKLIYSLYAMGRMEHIWGEDCMEFKPERWISDKGQIIHIPSYKFIAFNAGPRSCLGKDISFIQMKMVAASVLWMFRIHVVEGQSVTPRVSVVLRVEGLKVNVSKRCI