Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44726.t1 | ABD33348.2 | 97.9 | 775 | 13 | 2 | 1 | 773 | 1 | 774 | 0.00E+00 | 1414.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44726.t1 | Q9FMB4 | 67.0 | 793 | 234 | 5 | 4 | 772 | 6 | 794 | 7.4e-290 | 997.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44726.t1 | Q2HSE5 | 97.9 | 775 | 13 | 2 | 1 | 773 | 1 | 774 | 0.0e+00 | 1414.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene44726 | 0.859453 | 4.09E-63 | -1.69E-46 |
| MS.gene049350 | MS.gene44726 | 0.845143 | 4.88E-59 | -1.69E-46 |
| MS.gene049368 | MS.gene44726 | 0.821928 | 3.11E-53 | -1.69E-46 |
| MS.gene049807 | MS.gene44726 | 0.814909 | 1.21E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene44726 | 0.831476 | 1.63E-55 | -1.69E-46 |
| MS.gene050551 | MS.gene44726 | 0.842078 | 3.22E-58 | -1.69E-46 |
| MS.gene050689 | MS.gene44726 | 0.817582 | 3.06E-52 | -1.69E-46 |
| MS.gene050838 | MS.gene44726 | 0.807814 | 4.20E-50 | -1.69E-46 |
| MS.gene050901 | MS.gene44726 | 0.804156 | 2.47E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene44726 | 0.87479 | 5.13E-68 | -1.69E-46 |
| MS.gene051180 | MS.gene44726 | 0.804635 | 1.96E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene44726 | 0.819922 | 9.01E-53 | -1.69E-46 |
| MS.gene05157 | MS.gene44726 | 0.829678 | 4.50E-55 | -1.69E-46 |
| MS.gene051642 | MS.gene44726 | 0.804826 | 1.79E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene44726 | 0.807082 | 6.01E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene44726 | 0.835774 | 1.38E-56 | -1.69E-46 |
| MS.gene052397 | MS.gene44726 | 0.801327 | 9.49E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene44726 | 0.801303 | 9.59E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene44726 | 0.861654 | 8.82E-64 | -1.69E-46 |
| MS.gene053143 | MS.gene44726 | 0.843436 | 1.40E-58 | -1.69E-46 |
| MS.gene053144 | MS.gene44726 | 0.824258 | 8.90E-54 | -1.69E-46 |
| MS.gene053542 | MS.gene44726 | 0.803234 | 3.84E-49 | -1.69E-46 |
| MS.gene053581 | MS.gene44726 | 0.837125 | 6.25E-57 | -1.69E-46 |
| MS.gene054584 | MS.gene44726 | 0.808079 | 3.69E-50 | -1.69E-46 |
| MS.gene054709 | MS.gene44726 | 0.810968 | 8.85E-51 | -1.69E-46 |
| MS.gene054824 | MS.gene44726 | 0.809988 | 1.44E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene44726 | 0.801352 | 9.38E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene44726 | 0.846903 | 1.62E-59 | -1.69E-46 |
| MS.gene055466 | MS.gene44726 | 0.826951 | 2.05E-54 | -1.69E-46 |
| MS.gene055467 | MS.gene44726 | 0.806853 | 6.72E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene44726 | 0.840909 | 6.55E-58 | -1.69E-46 |
| MS.gene055469 | MS.gene44726 | 0.849992 | 2.26E-60 | -1.69E-46 |
| MS.gene055513 | MS.gene44726 | 0.831419 | 1.69E-55 | -1.69E-46 |
| MS.gene055537 | MS.gene44726 | 0.822467 | 2.33E-53 | -1.69E-46 |
| MS.gene055580 | MS.gene44726 | -0.803108 | 4.08E-49 | -1.69E-46 |
| MS.gene056005 | MS.gene44726 | 0.820231 | 7.65E-53 | -1.69E-46 |
| MS.gene056043 | MS.gene44726 | -0.802953 | 4.39E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene44726 | 0.865719 | 4.82E-65 | -1.69E-46 |
| MS.gene056507 | MS.gene44726 | 0.802366 | 5.80E-49 | -1.69E-46 |
| MS.gene057446 | MS.gene44726 | 0.808837 | 2.55E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene44726 | 0.803808 | 2.92E-49 | -1.69E-46 |
| MS.gene058087 | MS.gene44726 | 0.801579 | 8.42E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene44726 | 0.804113 | 2.52E-49 | -1.69E-46 |
| MS.gene058639 | MS.gene44726 | 0.800068 | 1.71E-48 | -1.69E-46 |
| MS.gene058668 | MS.gene44726 | 0.808938 | 2.42E-50 | -1.69E-46 |
| MS.gene058852 | MS.gene44726 | 0.820236 | 7.63E-53 | -1.69E-46 |
| MS.gene059171 | MS.gene44726 | 0.806774 | 6.99E-50 | -1.69E-46 |
| MS.gene059778 | MS.gene44726 | 0.806433 | 8.25E-50 | -1.69E-46 |
| MS.gene05978 | MS.gene44726 | 0.812301 | 4.54E-51 | -1.69E-46 |
| MS.gene061006 | MS.gene44726 | 0.831247 | 1.86E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene44726 | 0.834155 | 3.53E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44726.t1 | MTR_7g016900 | 97.935 | 775 | 13 | 2 | 1 | 773 | 1 | 774 | 0.0 | 1556 |
| MS.gene44726.t1 | MTR_7g008870 | 83.562 | 73 | 8 | 1 | 701 | 773 | 23 | 91 | 1.74e-34 | 127 |
| MS.gene44726.t1 | MTR_7g051850 | 86.441 | 59 | 8 | 0 | 686 | 744 | 8 | 66 | 8.49e-30 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44726.t1 | AT5G38880 | 70.113 | 793 | 209 | 6 | 4 | 772 | 6 | 794 | 0.0 | 1117 |
Find 194 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTACAGTATCCACTTTA+TGG | 0.131855 | 7.2:-81048782 | MS.gene44726:CDS |
| TATAGTAACAGAGACGTTTA+TGG | 0.205757 | 7.2:+81049642 | None:intergenic |
| GAAGAGGGAAGGGGAGGAAG+TGG | 0.217512 | 7.2:-81051494 | MS.gene44726:CDS |
| TGCAGGATGCTGCTTCATTT+TGG | 0.252455 | 7.2:-81040199 | MS.gene44726:intron |
| CAGTAATTGCCTGAAGTAAT+AGG | 0.266699 | 7.2:+81049270 | None:intergenic |
| TCGATGAACGGGCGAATTAC+AGG | 0.277357 | 7.2:-81051336 | MS.gene44726:intron |
| AAGAGAAGTTGCTGGTTTAA+AGG | 0.281025 | 7.2:-81045870 | MS.gene44726:CDS |
| GCACAAGATCCCGTCTAATA+TGG | 0.306533 | 7.2:+81037867 | None:intergenic |
| TGGAAGCTTGCAAATATGTT+TGG | 0.312539 | 7.2:-81037504 | MS.gene44726:CDS |
| AGCTGTTTATTCTACTGTTA+AGG | 0.323612 | 7.2:-81049534 | MS.gene44726:CDS |
| CATGTATTCAGCTAGATGTT+TGG | 0.326608 | 7.2:-81045901 | MS.gene44726:intron |
| GGAAGCTTGCAAATATGTTT+GGG | 0.327032 | 7.2:-81037503 | MS.gene44726:CDS |
| GGAAGTGGAGGTTGCGTTGA+TGG | 0.329516 | 7.2:-81051479 | MS.gene44726:CDS |
| ATGTATTCAGCTAGATGTTT+GGG | 0.331353 | 7.2:-81045900 | MS.gene44726:intron |
| GAAGAAGGAGAAGAGGGAAG+GGG | 0.335005 | 7.2:-81051503 | MS.gene44726:CDS |
| CTCCGGCGCTGGCGGCGTAT+TGG | 0.336927 | 7.2:+81051686 | None:intergenic |
| CACGGTGAAGGGGATGGTGG+TGG | 0.347298 | 7.2:-81051529 | MS.gene44726:CDS |
| CTTTATGGAAATGGAAAACT+TGG | 0.352170 | 7.2:-81048767 | MS.gene44726:CDS |
| CCTCGTAACGCGTGCGAAAT+CGG | 0.353135 | 7.2:-81051590 | MS.gene44726:CDS |
| CAGTATCCACTTTATGGAAA+TGG | 0.356840 | 7.2:-81048776 | MS.gene44726:CDS |
| TGGAAGTCTTAGACAACTTC+AGG | 0.363351 | 7.2:-81048470 | MS.gene44726:intron |
| TTTAAGAAGTGCGGTGTATA+TGG | 0.370811 | 7.2:+81045712 | None:intergenic |
| GATGTTACTTCTCGTTCAAT+TGG | 0.373150 | 7.2:-81048511 | MS.gene44726:CDS |
| AGTAATTGCCTGAAGTAATA+GGG | 0.377154 | 7.2:+81049271 | None:intergenic |
| CGGCATCGACGGTTGTCGAC+TGG | 0.377291 | 7.2:-81037219 | MS.gene44726:CDS |
| CGAATGGCTTCACAAAGAAA+TGG | 0.379940 | 7.2:-81051725 | MS.gene44726:CDS |
| TTTGAATGCTCAGCAGAGTT+TGG | 0.382937 | 7.2:-81037524 | MS.gene44726:CDS |
| TTCTTAATGCGCAGGCTTGG+AGG | 0.387723 | 7.2:-81037999 | MS.gene44726:intron |
| GCTGTTTATTCTACTGTTAA+GGG | 0.389280 | 7.2:-81049533 | MS.gene44726:CDS |
| TCAAGCAGAAGCAGCGAAGC+TGG | 0.397262 | 7.2:-81049363 | MS.gene44726:CDS |
| TCATGCCTACTTTGTTCAAC+AGG | 0.399440 | 7.2:-81037822 | MS.gene44726:CDS |
| AGAAGGAGGTTGAGAGGTTG+AGG | 0.408148 | 7.2:-81051441 | MS.gene44726:CDS |
| CGTGGATTCTTCCGTTGAAA+TGG | 0.408715 | 7.2:-81049588 | MS.gene44726:CDS |
| GGAAGAAGGAGAAGAGGGAA+GGG | 0.410628 | 7.2:-81051504 | MS.gene44726:CDS |
| GAGTCCTCCCCTATTACTTC+AGG | 0.412492 | 7.2:-81049279 | MS.gene44726:CDS |
| GGAGAGGGATTCGGTGAAGA+AGG | 0.415697 | 7.2:-81051458 | MS.gene44726:CDS |
| GTAATAGGGGAGGACTCTTT+AGG | 0.420923 | 7.2:+81049285 | None:intergenic |
| GAAGAGGATGCTCGATGAAC+GGG | 0.421383 | 7.2:-81051347 | MS.gene44726:CDS |
| TGATGAGTGGTGGGAGCAAC+CGG | 0.422273 | 7.2:-81037239 | MS.gene44726:CDS |
| CTGCCGTGGGAACATGATTC+CGG | 0.423922 | 7.2:-81051623 | MS.gene44726:CDS |
| AGCATGTAGAGGCTATTATC+TGG | 0.424373 | 7.2:+81040047 | None:intergenic |
| GGCTTGGAGGGTTCAGATGC+TGG | 0.426927 | 7.2:-81037986 | MS.gene44726:CDS |
| CAGGCACTGCTTGAGGCCAT+CGG | 0.427432 | 7.2:-81039125 | MS.gene44726:CDS |
| GAAGGAGAAGAGGGAAGGGG+AGG | 0.428697 | 7.2:-81051500 | MS.gene44726:CDS |
| ATCGGGTCCAGTGGATCATC+TGG | 0.429603 | 7.2:-81039107 | MS.gene44726:CDS |
| ATGGATGTTTCCTCTTCTGA+TGG | 0.430234 | 7.2:-81048812 | MS.gene44726:CDS |
| TGCGTTGATGGAGAGGGATT+CGG | 0.432482 | 7.2:-81051467 | MS.gene44726:CDS |
| GCTGAGACCCGACATATTGA+TGG | 0.433205 | 7.2:+81039005 | None:intergenic |
| CGCACTTCTTAAAGCAAATA+CGG | 0.440398 | 7.2:-81045702 | MS.gene44726:intron |
| ATCGAGCATCCTCTTCCTCT+CGG | 0.443607 | 7.2:+81051354 | None:intergenic |
| GGATGGTGGTGGGAGGAAGA+AGG | 0.444216 | 7.2:-81051518 | MS.gene44726:CDS |
| ATATGAAAATAACATAGTTA+TGG | 0.453264 | 7.2:-81048831 | MS.gene44726:CDS |
| TGGTTCAGAAGCTAGTGTTT+TGG | 0.454086 | 7.2:-81037918 | MS.gene44726:CDS |
| AGGAAGAAGGAGAAGAGGGA+AGG | 0.454517 | 7.2:-81051505 | MS.gene44726:CDS |
| AGCTTCGCTGCTTCTGCTTG+AGG | 0.455594 | 7.2:+81049365 | None:intergenic |
| TGGGAGGAAGAAGGAGAAGA+GGG | 0.456610 | 7.2:-81051509 | MS.gene44726:CDS |
| GAGGGAAGGGGAGGAAGTGG+AGG | 0.459680 | 7.2:-81051491 | MS.gene44726:CDS |
| TGATGGGCAGATTCCGGATG+AGG | 0.464339 | 7.2:-81049330 | MS.gene44726:CDS |
| CTTGGGGCTGATGTGCCTCC+AGG | 0.466724 | 7.2:-81048749 | MS.gene44726:CDS |
| GGGAAGAAGCCGAGAGGAAG+AGG | 0.466854 | 7.2:-81051363 | MS.gene44726:CDS |
| CATGCTTCCTTCTTCACCAC+AGG | 0.472095 | 7.2:-81040030 | MS.gene44726:intron |
| TTCTGCAGCTTGATGAGTGG+TGG | 0.472825 | 7.2:-81037249 | MS.gene44726:intron |
| ATAACTGTTCTAACCTCATC+CGG | 0.473562 | 7.2:+81049317 | None:intergenic |
| GAATAAAGACCTGTCTTTCA+AGG | 0.474678 | 7.2:+81048708 | None:intergenic |
| GACAGCAAGAGCCGGTGCTC+GGG | 0.476775 | 7.2:-81039042 | MS.gene44726:CDS |
| AAAACACCAGTCTTGAGTTC+AGG | 0.477991 | 7.2:+81037544 | None:intergenic |
| GTCGACTGGGTGACAGTGGA+TGG | 0.478572 | 7.2:-81037205 | MS.gene44726:CDS |
| AAATCAGCTCCTTGAAAGAC+AGG | 0.479838 | 7.2:-81048717 | MS.gene44726:intron |
| TGACAGCAAGAGCCGGTGCT+CGG | 0.480202 | 7.2:-81039043 | MS.gene44726:CDS |
| GGCCAATACGCCGCCAGCGC+CGG | 0.481521 | 7.2:-81051688 | MS.gene44726:CDS |
| TTCATCACATTGGCGGTCAT+AGG | 0.482889 | 7.2:+81049688 | None:intergenic |
| AGGCACTGCTTGAGGCCATC+GGG | 0.484747 | 7.2:-81039124 | MS.gene44726:CDS |
| CAAGCAGAAGCAGCGAAGCT+GGG | 0.485794 | 7.2:-81049362 | MS.gene44726:CDS |
| GTGGGAGGAAGAAGGAGAAG+AGG | 0.488322 | 7.2:-81051510 | MS.gene44726:CDS |
| ATCTTCGGCTTCTTTCCTCT+CGG | 0.489665 | 7.2:+81045796 | None:intergenic |
| GCAAAGGAAAGAGAAGTTGC+TGG | 0.490620 | 7.2:-81045878 | MS.gene44726:CDS |
| GTGAAGGGGATGGTGGTGGG+AGG | 0.491173 | 7.2:-81051525 | MS.gene44726:CDS |
| GCAAGGGATGCTCAAAGATC+AGG | 0.494346 | 7.2:-81049611 | MS.gene44726:CDS |
| GCTTCTAACATGTTATGATC+AGG | 0.495135 | 7.2:-81037146 | MS.gene44726:CDS |
| TGGATGTTTCCTCTTCTGAT+GGG | 0.496110 | 7.2:-81048811 | MS.gene44726:CDS |
| TGCTGGTCTAGCATCCGTAC+TGG | 0.496331 | 7.2:-81037969 | MS.gene44726:CDS |
| GGCAATTCCATCAATATGTC+GGG | 0.498007 | 7.2:-81039012 | MS.gene44726:CDS |
| ACGCCACTTCCTTCGTAAGC+AGG | 0.500417 | 7.2:+81049398 | None:intergenic |
| GAATGTGAGGAGGAATATTA+CGG | 0.500989 | 7.2:-81051554 | MS.gene44726:CDS |
| TTTCGGATCGATTCGACTGA+CGG | 0.501011 | 7.2:+81051649 | None:intergenic |
| CAATACGCCGCCAGCGCCGG+AGG | 0.501014 | 7.2:-81051685 | MS.gene44726:CDS |
| GGCATCGACGGTTGTCGACT+GGG | 0.501409 | 7.2:-81037218 | MS.gene44726:CDS |
| GAATGGCTTCACAAAGAAAT+GGG | 0.502140 | 7.2:-81051724 | MS.gene44726:CDS |
| GCTGCACTTCAGTATGCTGC+TGG | 0.502447 | 7.2:-81038984 | MS.gene44726:CDS |
| CGAGGATGCTTGAAGTTTCG+AGG | 0.503446 | 7.2:-81051384 | MS.gene44726:CDS |
| TTATAAACCTGTGGTGAAGA+AGG | 0.508261 | 7.2:+81040023 | None:intergenic |
| TTAATCTTGTCCATATTAGA+CGG | 0.508890 | 7.2:-81037877 | MS.gene44726:CDS |
| TCGAGTATCGCTTCCGGTGA+CGG | 0.509073 | 7.2:+81051745 | None:intergenic |
| GAGACAGAGGAAGGATTTGA+AGG | 0.510684 | 7.2:-81051407 | MS.gene44726:CDS |
| TGTTGTGAGGAGACAGAGGA+AGG | 0.512237 | 7.2:-81051416 | MS.gene44726:CDS |
| ATATTACGGTTCACGGTGAA+GGG | 0.512455 | 7.2:-81051540 | MS.gene44726:CDS |
| CAGGCATAAGCAAGTGATGT+TGG | 0.512719 | 7.2:-81049714 | MS.gene44726:CDS |
| TTGCAAATATGTTTGGGGAT+TGG | 0.513243 | 7.2:-81037497 | MS.gene44726:intron |
| CGGTGAAGAAGGAGGTTGAG+AGG | 0.514023 | 7.2:-81051447 | MS.gene44726:CDS |
| TTTCCTGCTTACGAAGGAAG+TGG | 0.514296 | 7.2:-81049401 | MS.gene44726:CDS |
| TCTGCAGCTTGATGAGTGGT+GGG | 0.516666 | 7.2:-81037248 | MS.gene44726:intron |
| AGCCATTCGAGTATCGCTTC+CGG | 0.518680 | 7.2:+81051739 | None:intergenic |
| AATATTACGGTTCACGGTGA+AGG | 0.519453 | 7.2:-81051541 | MS.gene44726:CDS |
| TGCCGACGGATCCCGAGCAC+CGG | 0.519503 | 7.2:+81039031 | None:intergenic |
| GGAGGTTGCGTTGATGGAGA+GGG | 0.522089 | 7.2:-81051473 | MS.gene44726:CDS |
| GGAATGTTGTGAGGAGACAG+AGG | 0.522586 | 7.2:-81051420 | MS.gene44726:CDS |
| ACAATCTGCATCGCCGTCAC+CGG | 0.528251 | 7.2:-81051758 | MS.gene44726:CDS |
| TCGAAGCTTCATCACATTGG+CGG | 0.529322 | 7.2:+81049681 | None:intergenic |
| AGCATCCGTACTGGAGTCCC+TGG | 0.531380 | 7.2:-81037960 | MS.gene44726:CDS |
| ATAGTCCTGTTGAACAAAGT+AGG | 0.534887 | 7.2:+81037817 | None:intergenic |
| AGCCGGTGCTCGGGATCCGT+CGG | 0.535214 | 7.2:-81039033 | MS.gene44726:CDS |
| AGAACATGCTGGAATTATAG+TGG | 0.536226 | 7.2:+81040139 | None:intergenic |
| CCGATTTCGCACGCGTTACG+AGG | 0.536395 | 7.2:+81051590 | None:intergenic |
| GTCCAGTGGATCATCTGGAC+AGG | 0.537413 | 7.2:-81039102 | MS.gene44726:CDS |
| TGGAGGTTGCGTTGATGGAG+AGG | 0.537697 | 7.2:-81051474 | MS.gene44726:CDS |
| TCTTAATGCGCAGGCTTGGA+GGG | 0.537896 | 7.2:-81037998 | MS.gene44726:intron |
| TAATCTTGTCCATATTAGAC+GGG | 0.538291 | 7.2:-81037876 | MS.gene44726:CDS |
| TGAATCTCTTGTAGCTTACA+TGG | 0.539346 | 7.2:-81049444 | MS.gene44726:CDS |
| AAAACTATTTACCATTTCAA+CGG | 0.539456 | 7.2:+81049577 | None:intergenic |
| GCGTTGTATTTCAGACATCA+AGG | 0.541137 | 7.2:+81045835 | None:intergenic |
| GTCAGCAACCATCGACTGCA+AGG | 0.542373 | 7.2:-81040175 | MS.gene44726:CDS |
| CAGTCGACAACCGTCGATGC+CGG | 0.544298 | 7.2:+81037220 | None:intergenic |
| TTCTCGAAGCTTCATCACAT+TGG | 0.544752 | 7.2:+81049678 | None:intergenic |
| GTTACTATATAAATCAAGCA+AGG | 0.546325 | 7.2:-81049628 | MS.gene44726:CDS |
| AGGAGGAATATTACGGTTCA+CGG | 0.547542 | 7.2:-81051547 | MS.gene44726:CDS |
| GAGGGATTCGGTGAAGAAGG+AGG | 0.548565 | 7.2:-81051455 | MS.gene44726:CDS |
| ACGGTGAAGGGGATGGTGGT+GGG | 0.550521 | 7.2:-81051528 | MS.gene44726:CDS |
| TCAGCTAGATGTTTGGGCAA+AGG | 0.550594 | 7.2:-81045894 | MS.gene44726:intron |
| GTGGGAGCAACCGGCATCGA+CGG | 0.554649 | 7.2:-81037230 | MS.gene44726:CDS |
| GACGTTTCAAGCAAAACTCC+AGG | 0.555173 | 7.2:+81037942 | None:intergenic |
| TTCTTCTGCAGCTTGATGAG+TGG | 0.555882 | 7.2:-81037252 | MS.gene44726:intron |
| TAAACAATGCTGCAGAAGCA+AGG | 0.557173 | 7.2:-81048576 | MS.gene44726:CDS |
| TCTGGTTCAGGCACTGCTTG+AGG | 0.561058 | 7.2:-81039132 | MS.gene44726:intron |
| TTCCTGTCCAGATGATCCAC+TGG | 0.561115 | 7.2:+81039100 | None:intergenic |
| GGAAGAGGATGCTCGATGAA+CGG | 0.564200 | 7.2:-81051348 | MS.gene44726:CDS |
| TTTATGGAAATGGAAAACTT+GGG | 0.564742 | 7.2:-81048766 | MS.gene44726:CDS |
| CGGCAATTCCATCAATATGT+CGG | 0.564930 | 7.2:-81039013 | MS.gene44726:CDS |
| GCATACTCCCTTGCAGTCGA+TGG | 0.568781 | 7.2:+81040167 | None:intergenic |
| GGAGCCACGTCTCAAAATGT+TGG | 0.569343 | 7.2:-81048490 | MS.gene44726:CDS |
| TCAACAACAGCAGAACATGC+TGG | 0.570268 | 7.2:+81040128 | None:intergenic |
| GAGCTGATGCAGAGATCTTG+AGG | 0.571777 | 7.2:-81049190 | MS.gene44726:intron |
| AAACTTATGAAACGTCTGCA+TGG | 0.572224 | 7.2:-81048541 | MS.gene44726:CDS |
| ACGGTTCACGGTGAAGGGGA+TGG | 0.572577 | 7.2:-81051535 | MS.gene44726:CDS |
| GAGGGAAAAGAATATTAGAA+AGG | 0.573113 | 7.2:-81049471 | MS.gene44726:CDS |
| CTTGAGGCCATCGGGTCCAG+TGG | 0.580795 | 7.2:-81039116 | MS.gene44726:CDS |
| CGTATTTGCTTTAAGAAGTG+CGG | 0.581014 | 7.2:+81045703 | None:intergenic |
| AAACTCCAGGGACTCCAGTA+CGG | 0.583455 | 7.2:+81037955 | None:intergenic |
| TTGTTCAACAGGACTATGAA+AGG | 0.583997 | 7.2:-81037811 | MS.gene44726:intron |
| TGGTTGCCTGAACTCAAGAC+TGG | 0.584766 | 7.2:-81037550 | MS.gene44726:CDS |
| AAACAATGCTGCAGAAGCAA+GGG | 0.586745 | 7.2:-81048575 | MS.gene44726:CDS |
| GTGGGAACATGATTCCGGTA+TGG | 0.586849 | 7.2:-81051618 | MS.gene44726:CDS |
| AGAACAAGAAAGAGCTGTCA+CGG | 0.587048 | 7.2:-81037578 | MS.gene44726:CDS |
| AGGAGAGCTCCCATCAGAAG+AGG | 0.587302 | 7.2:+81048802 | None:intergenic |
| GCGTGCGAAATCGGAGAAGA+CGG | 0.587591 | 7.2:-81051581 | MS.gene44726:CDS |
| CCATAAAGTGGATACTGTAG+AGG | 0.590208 | 7.2:+81048782 | None:intergenic |
| GAAGCTTGCAAATATGTTTG+GGG | 0.591476 | 7.2:-81037502 | MS.gene44726:CDS |
| AAGCAGAAGCAGCGAAGCTG+GGG | 0.592988 | 7.2:-81049361 | MS.gene44726:CDS |
| GCATAAGCAAGTGATGTTGG+AGG | 0.594477 | 7.2:-81049711 | MS.gene44726:CDS |
| AGACGGTGAGGAATGTGAGG+AGG | 0.594639 | 7.2:-81051564 | MS.gene44726:CDS |
| CACCGGAAGCGATACTCGAA+TGG | 0.595650 | 7.2:-81051741 | MS.gene44726:CDS |
| TGAGACTTCAAATAGTGCAA+AGG | 0.605516 | 7.2:-81040108 | MS.gene44726:CDS |
| TTACTATATAAATCAAGCAA+GGG | 0.605937 | 7.2:-81049627 | MS.gene44726:CDS |
| AGATGATCCACTGGACCCGA+TGG | 0.607871 | 7.2:+81039109 | None:intergenic |
| GAGGATGCTTGAAGTTTCGA+GGG | 0.609420 | 7.2:-81051383 | MS.gene44726:CDS |
| TTATGGAAATGGAAAACTTG+GGG | 0.612636 | 7.2:-81048765 | MS.gene44726:CDS |
| TCGACTGGGTGACAGTGGAT+GGG | 0.613672 | 7.2:-81037204 | MS.gene44726:CDS |
| CTGGCGGCGTATTGGCCGAG+TGG | 0.620113 | 7.2:+81051694 | None:intergenic |
| GTTCACGGTGAAGGGGATGG+TGG | 0.622464 | 7.2:-81051532 | MS.gene44726:CDS |
| GGATGCTCAAAGATCAGGCG+TGG | 0.622609 | 7.2:-81049606 | MS.gene44726:CDS |
| GTAATTGCCTGAAGTAATAG+GGG | 0.623240 | 7.2:+81049272 | None:intergenic |
| AGAGGTTGAGGAATGTTGTG+AGG | 0.624388 | 7.2:-81051429 | MS.gene44726:CDS |
| AGAGGAAGGATTTGAAGGCG+AGG | 0.624566 | 7.2:-81051402 | MS.gene44726:CDS |
| GCACTTCAGTATGCTGCTGG+TGG | 0.632432 | 7.2:-81038981 | MS.gene44726:intron |
| CATATTGATGGAATTGCCGA+CGG | 0.639784 | 7.2:+81039017 | None:intergenic |
| TCAGCAACCATCGACTGCAA+GGG | 0.640424 | 7.2:-81040174 | MS.gene44726:CDS |
| GTGAAGAAGGAAGCATGTAG+AGG | 0.641857 | 7.2:+81040036 | None:intergenic |
| ATACCGGAATCATGTTCCCA+CGG | 0.646015 | 7.2:+81051620 | None:intergenic |
| AGAAGACGGTGAGGAATGTG+AGG | 0.646989 | 7.2:-81051567 | MS.gene44726:CDS |
| TATTACGGTTCACGGTGAAG+GGG | 0.647653 | 7.2:-81051539 | MS.gene44726:CDS |
| AGACGGGATCTTGTGCAAAG+TGG | 0.651848 | 7.2:-81037860 | MS.gene44726:CDS |
| GAAATGGGATACAGACCACT+CGG | 0.655763 | 7.2:-81051709 | MS.gene44726:CDS |
| TGCAAATGCAGAAATAAGTG+CGG | 0.669100 | 7.2:-81039072 | MS.gene44726:CDS |
| GGTTGTCGACTGGGTGACAG+TGG | 0.670105 | 7.2:-81037209 | MS.gene44726:CDS |
| ATTGCCTGAAGTAATAGGGG+AGG | 0.671022 | 7.2:+81049275 | None:intergenic |
| ACGTTTCAAGCAAAACTCCA+GGG | 0.675911 | 7.2:+81037943 | None:intergenic |
| GTTACGAGGAAATTCCATAC+CGG | 0.676098 | 7.2:+81051604 | None:intergenic |
| GGGGCTGATGTGCCTCCAGG+AGG | 0.680711 | 7.2:-81048746 | MS.gene44726:CDS |
| AAAGTAGGCATGATTCAACA+AGG | 0.689759 | 7.2:+81037832 | None:intergenic |
| TTTCGAGGGAAGAAGCCGAG+AGG | 0.698256 | 7.2:-81051369 | MS.gene44726:CDS |
| CGAAATCGGAGAAGACGGTG+AGG | 0.699101 | 7.2:-81051576 | MS.gene44726:CDS |
| CTTATGAAACGTCTGCATGG+AGG | 0.715108 | 7.2:-81048538 | MS.gene44726:CDS |
| TGAATAAGTTATGTGCCGAG+AGG | 0.730094 | 7.2:-81045811 | MS.gene44726:CDS |
| CATTGTCATTGAAACCACGA+GGG | 0.732985 | 7.2:-81049489 | MS.gene44726:CDS |
| TCATTGTCATTGAAACCACG+AGG | 0.733906 | 7.2:-81049490 | MS.gene44726:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 81037132 | 81051785 | 81037132 | ID=MS.gene44726 |
| chr7.2 | mRNA | 81037132 | 81051785 | 81037132 | ID=MS.gene44726.t1;Parent=MS.gene44726 |
| chr7.2 | exon | 81051337 | 81051785 | 81051337 | ID=MS.gene44726.t1.exon1;Parent=MS.gene44726.t1 |
| chr7.2 | CDS | 81051337 | 81051785 | 81051337 | ID=cds.MS.gene44726.t1;Parent=MS.gene44726.t1 |
| chr7.2 | exon | 81049191 | 81049733 | 81049191 | ID=MS.gene44726.t1.exon2;Parent=MS.gene44726.t1 |
| chr7.2 | CDS | 81049191 | 81049733 | 81049191 | ID=cds.MS.gene44726.t1;Parent=MS.gene44726.t1 |
| chr7.2 | exon | 81048718 | 81048859 | 81048718 | ID=MS.gene44726.t1.exon3;Parent=MS.gene44726.t1 |
| chr7.2 | CDS | 81048718 | 81048859 | 81048718 | ID=cds.MS.gene44726.t1;Parent=MS.gene44726.t1 |
| chr7.2 | exon | 81048471 | 81048638 | 81048471 | ID=MS.gene44726.t1.exon4;Parent=MS.gene44726.t1 |
| chr7.2 | CDS | 81048471 | 81048638 | 81048471 | ID=cds.MS.gene44726.t1;Parent=MS.gene44726.t1 |
| chr7.2 | exon | 81045703 | 81045912 | 81045703 | ID=MS.gene44726.t1.exon5;Parent=MS.gene44726.t1 |
| chr7.2 | CDS | 81045703 | 81045912 | 81045703 | ID=cds.MS.gene44726.t1;Parent=MS.gene44726.t1 |
| chr7.2 | exon | 81040031 | 81040216 | 81040031 | ID=MS.gene44726.t1.exon6;Parent=MS.gene44726.t1 |
| chr7.2 | CDS | 81040031 | 81040216 | 81040031 | ID=cds.MS.gene44726.t1;Parent=MS.gene44726.t1 |
| chr7.2 | exon | 81038982 | 81039144 | 81038982 | ID=MS.gene44726.t1.exon7;Parent=MS.gene44726.t1 |
| chr7.2 | CDS | 81038982 | 81039144 | 81038982 | ID=cds.MS.gene44726.t1;Parent=MS.gene44726.t1 |
| chr7.2 | exon | 81037812 | 81038007 | 81037812 | ID=MS.gene44726.t1.exon8;Parent=MS.gene44726.t1 |
| chr7.2 | CDS | 81037812 | 81038007 | 81037812 | ID=cds.MS.gene44726.t1;Parent=MS.gene44726.t1 |
| chr7.2 | exon | 81037498 | 81037630 | 81037498 | ID=MS.gene44726.t1.exon9;Parent=MS.gene44726.t1 |
| chr7.2 | CDS | 81037498 | 81037630 | 81037498 | ID=cds.MS.gene44726.t1;Parent=MS.gene44726.t1 |
| chr7.2 | exon | 81037132 | 81037263 | 81037132 | ID=MS.gene44726.t1.exon10;Parent=MS.gene44726.t1 |
| chr7.2 | CDS | 81037132 | 81037263 | 81037132 | ID=cds.MS.gene44726.t1;Parent=MS.gene44726.t1 |
| Gene Sequence |
| Protein sequence |
