AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44881

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44881.t1 MTR_5g070040 93.842 341 21 0 1 341 130 470 0.0 666
MS.gene44881.t1 MTR_5g070090 76.369 347 68 4 1 341 127 465 0.0 531
MS.gene44881.t1 MTR_2g040530 47.550 347 160 9 1 334 124 461 2.11e-107 322
MS.gene44881.t1 MTR_2g046750 48.696 345 157 9 1 335 129 463 4.84e-107 321
MS.gene44881.t1 MTR_2g046820 47.414 348 161 9 1 335 122 460 3.76e-105 316
MS.gene44881.t1 MTR_5g098930 43.526 363 172 12 1 338 114 468 6.42e-91 280
MS.gene44881.t1 MTR_5g090630 42.818 362 176 13 1 339 114 467 1.78e-88 273
MS.gene44881.t1 MTR_5g090620 42.424 363 176 13 1 338 122 476 2.23e-88 273
MS.gene44881.t1 MTR_5g090660 41.551 361 180 10 1 338 121 473 3.02e-88 276
MS.gene44881.t1 MTR_5g090700 43.370 362 172 14 1 338 125 477 5.73e-88 273
MS.gene44881.t1 MTR_5g090610 42.090 354 170 10 1 335 121 458 3.43e-87 270
MS.gene44881.t1 MTR_5g090670 42.149 363 180 11 1 339 123 479 7.93e-86 267
MS.gene44881.t1 MTR_5g090580 41.436 362 179 11 1 338 123 475 1.89e-85 266
MS.gene44881.t1 MTR_5g090600 40.857 350 179 9 1 338 121 454 1.15e-83 261
MS.gene44881.t1 MTR_6g033675 36.782 348 190 13 4 335 129 462 2.40e-60 201
MS.gene44881.t1 MTR_6g488280 36.527 334 182 11 3 319 123 443 3.30e-59 197
MS.gene44881.t1 MTR_0428s0010 36.527 334 182 11 3 319 123 443 3.30e-59 197
MS.gene44881.t1 MTR_3g009510 36.088 363 190 13 2 334 123 473 4.09e-58 195
MS.gene44881.t1 MTR_8g027870 35.795 352 193 9 1 333 131 468 2.51e-57 193
MS.gene44881.t1 MTR_8g027885 37.216 352 184 12 3 333 133 468 2.79e-57 193
MS.gene44881.t1 MTR_6g033660 37.607 351 181 13 4 335 130 461 2.39e-56 190
MS.gene44881.t1 MTR_8g074550 33.062 369 201 10 7 337 128 488 2.57e-56 191
MS.gene44881.t1 MTR_6g023665 35.135 333 188 10 3 319 130 450 1.29e-55 188
MS.gene44881.t1 MTR_6g033725 36.752 351 185 13 4 335 127 459 2.35e-55 187
MS.gene44881.t1 MTR_6g033615 36.599 347 184 13 4 336 125 449 1.37e-53 182
MS.gene44881.t1 MTR_6g033625 36.286 350 190 13 4 336 130 463 6.98e-53 181
MS.gene44881.t1 MTR_8g006730 34.118 340 189 10 3 321 122 447 1.34e-52 180
MS.gene44881.t1 MTR_8g006270 34.857 350 197 12 5 334 122 460 1.99e-52 180
MS.gene44881.t1 MTR_6g005600 35.294 357 192 14 1 333 122 463 2.69e-52 179
MS.gene44881.t1 MTR_8g006710 35.000 340 186 12 3 321 121 446 5.41e-52 179
MS.gene44881.t1 MTR_8g009055 33.048 351 208 9 1 333 121 462 5.87e-52 179
MS.gene44881.t1 MTR_8g465670 33.799 358 199 13 1 334 124 467 4.25e-50 174
MS.gene44881.t1 MTR_1g019510 32.479 351 205 11 2 333 122 459 1.66e-49 172
MS.gene44881.t1 MTR_7g117170 34.366 355 194 11 3 333 132 471 2.23e-49 172
MS.gene44881.t1 MTR_8g009073 35.030 334 189 10 2 319 122 443 2.92e-49 171
MS.gene44881.t1 MTR_8g008990 33.239 355 204 11 1 333 121 464 3.54e-49 171
MS.gene44881.t1 MTR_8g009073 35.494 324 181 10 12 319 3 314 5.48e-49 167
MS.gene44881.t1 MTR_8g006260 33.711 353 187 15 3 327 126 459 6.54e-49 171
MS.gene44881.t1 MTR_0184s0030 31.909 351 208 14 2 333 125 463 1.25e-48 170
MS.gene44881.t1 MTR_8g009050 32.394 355 203 11 2 333 122 462 2.28e-48 169
MS.gene44881.t1 MTR_0184s0040 33.333 351 204 10 2 333 137 476 5.09e-48 168
MS.gene44881.t1 MTR_0078s0190 33.333 351 204 10 2 333 137 476 5.09e-48 168
MS.gene44881.t1 MTR_8g012635 30.473 338 207 11 2 320 123 451 2.39e-47 166
MS.gene44881.t1 MTR_8g077590 32.123 358 212 13 2 341 125 469 3.71e-47 166
MS.gene44881.t1 MTR_8g009067 32.951 349 209 9 2 334 4 343 4.32e-47 163
MS.gene44881.t1 MTR_8g009063 32.857 350 208 10 2 333 129 469 6.51e-47 166
MS.gene44881.t1 MTR_8g006220 34.441 331 172 13 1 304 123 435 1.00e-46 165
MS.gene44881.t1 MTR_8g008970 33.143 350 205 10 2 333 122 460 1.55e-46 169
MS.gene44881.t1 MTR_8g008970 34.944 269 155 7 70 333 531 784 4.27e-37 141
MS.gene44881.t1 MTR_8g012745 32.479 351 205 15 2 331 123 462 2.27e-46 164
MS.gene44881.t1 MTR_4g082820 36.333 300 179 10 44 334 164 460 2.55e-46 164
MS.gene44881.t1 MTR_8g009067 32.951 349 209 9 2 334 122 461 6.30e-46 162
MS.gene44881.t1 MTR_7g046490 32.733 333 198 10 1 319 121 441 7.75e-46 162
MS.gene44881.t1 MTR_0078s0060 38.672 256 136 7 59 303 180 425 9.50e-46 162
MS.gene44881.t1 MTR_7g047030 33.051 354 202 13 2 333 122 462 5.64e-45 160
MS.gene44881.t1 MTR_7g047270 33.051 354 202 13 2 333 122 462 5.64e-45 160
MS.gene44881.t1 MTR_0078s0010 32.386 352 207 12 2 333 122 462 5.94e-45 160
MS.gene44881.t1 MTR_5g019580 32.113 355 208 10 4 333 128 474 1.92e-44 159
MS.gene44881.t1 MTR_4g485630 37.879 264 148 6 85 335 211 471 2.23e-44 159
MS.gene44881.t1 MTR_5g019580 35.315 286 156 8 70 333 220 498 8.37e-44 158
MS.gene44881.t1 MTR_5g090690 34.493 345 153 13 1 327 81 370 1.54e-43 154
MS.gene44881.t1 MTR_8g066610 34.903 361 191 17 3 335 131 475 1.83e-43 156
MS.gene44881.t1 MTR_2g098430 33.696 368 198 17 4 341 132 483 3.26e-43 155
MS.gene44881.t1 MTR_6g078320 33.526 346 215 11 1 335 136 477 5.58e-43 155
MS.gene44881.t1 MTR_8g012650 29.882 338 209 11 2 320 123 451 1.07e-42 154
MS.gene44881.t1 MTR_4g094220 31.956 363 201 13 2 334 129 475 1.48e-42 154
MS.gene44881.t1 MTR_5g464810 32.507 363 205 14 2 339 133 480 8.24e-42 152
MS.gene44881.t1 MTR_5g064240 32.507 363 205 14 2 339 133 480 8.24e-42 152
MS.gene44881.t1 MTR_8g012730 30.696 316 171 9 31 328 13 298 1.51e-41 147
MS.gene44881.t1 MTR_8g088560 37.413 286 145 12 68 335 186 455 2.66e-41 150
MS.gene44881.t1 MTR_6g038220 31.977 344 194 13 1 326 121 442 4.61e-41 149
MS.gene44881.t1 MTR_5g464760 32.493 357 204 14 2 334 133 476 5.77e-41 149
MS.gene44881.t1 MTR_1g107350 33.333 342 200 12 1 326 128 457 1.17e-40 149
MS.gene44881.t1 MTR_4g095008 30.939 362 211 13 2 341 124 468 2.01e-40 149
MS.gene44881.t1 MTR_1g032490 32.945 343 200 12 1 326 130 459 2.13e-40 148
MS.gene44881.t1 MTR_0536s0020 32.312 359 200 17 3 335 136 477 2.25e-40 148
MS.gene44881.t1 MTR_4g082810 36.364 286 160 11 4 275 125 402 2.58e-40 146
MS.gene44881.t1 MTR_1g019520 41.038 212 104 6 137 333 3 208 4.09e-40 140
MS.gene44881.t1 MTR_7g102460 29.508 366 222 14 2 341 133 488 4.91e-40 147
MS.gene44881.t1 MTR_7g102490 30.458 371 210 17 4 341 135 490 5.59e-40 147
MS.gene44881.t1 MTR_1g107360 36.742 264 137 10 86 339 216 459 1.00e-39 146
MS.gene44881.t1 MTR_6g038200 31.487 343 195 13 2 326 123 443 2.29e-39 145
MS.gene44881.t1 MTR_5g045970 29.589 365 220 13 1 337 138 493 2.89e-39 145
MS.gene44881.t1 MTR_6g038230 30.854 363 193 13 10 339 119 456 1.69e-38 142
MS.gene44881.t1 MTR_0036s0220 32.320 362 205 14 2 338 133 479 3.93e-38 142
MS.gene44881.t1 MTR_5g087620 32.514 366 206 16 3 339 142 495 9.78e-38 141
MS.gene44881.t1 MTR_4g485620 31.956 363 196 18 3 335 111 452 1.65e-37 140
MS.gene44881.t1 MTR_1g107315 32.070 343 203 12 1 326 128 457 1.65e-37 140
MS.gene44881.t1 MTR_7g102550 29.799 349 213 10 3 326 133 474 1.67e-37 140
MS.gene44881.t1 MTR_8g090095 37.200 250 129 10 83 320 219 452 1.71e-37 140
MS.gene44881.t1 MTR_5g072810 30.383 339 203 11 2 326 123 442 3.21e-37 139
MS.gene44881.t1 MTR_1g107285 30.659 349 195 13 1 326 128 452 3.25e-37 139
MS.gene44881.t1 MTR_5g040030 32.873 362 201 16 2 334 136 484 3.49e-37 139
MS.gene44881.t1 MTR_8g012630 38.174 241 117 10 104 319 161 394 3.53e-37 138
MS.gene44881.t1 MTR_3g049970 31.487 343 205 13 1 326 129 458 3.55e-37 139
MS.gene44881.t1 MTR_5g035580 30.726 358 209 14 2 341 121 457 4.39e-37 139
MS.gene44881.t1 MTR_6g014040 31.190 311 181 12 47 341 192 485 4.70e-37 139
MS.gene44881.t1 MTR_4g117960 30.748 361 209 16 3 335 131 478 6.73e-37 139
MS.gene44881.t1 MTR_6g014050 34.173 278 154 10 77 341 224 485 7.72e-37 138
MS.gene44881.t1 MTR_7g117405 30.748 361 211 12 2 337 135 481 1.02e-36 138
MS.gene44881.t1 MTR_0009s0240 38.308 201 112 7 81 277 207 399 1.08e-36 137
MS.gene44881.t1 MTR_3g079480 35.793 271 149 10 83 341 235 492 1.08e-36 138
MS.gene44881.t1 MTR_6g038240 32.895 304 164 11 42 326 161 443 1.23e-36 137
MS.gene44881.t1 MTR_6g014250 29.945 364 218 13 2 341 132 482 1.28e-36 137
MS.gene44881.t1 MTR_8g064880 36.681 229 122 7 86 302 218 435 2.03e-36 137
MS.gene44881.t1 MTR_4g485590 42.523 214 103 9 85 292 191 390 2.05e-36 136
MS.gene44881.t1 MTR_8g064870 35.409 257 140 9 86 326 216 462 2.12e-36 137
MS.gene44881.t1 MTR_1g062380 29.508 366 220 14 1 337 138 494 2.78e-36 137
MS.gene44881.t1 MTR_4g117890 30.084 359 212 14 3 337 131 474 3.11e-36 137
MS.gene44881.t1 MTR_0891s0010 33.456 272 154 9 83 341 36 293 3.49e-36 132
MS.gene44881.t1 MTR_3g008010 30.194 361 214 12 2 338 132 478 3.57e-36 136
MS.gene44881.t1 MTR_4g118000 32.493 357 195 15 3 335 130 464 4.05e-36 136
MS.gene44881.t1 MTR_3g479610 34.091 264 149 10 83 334 59 309 4.44e-36 133
MS.gene44881.t1 MTR_6g038300 30.747 348 192 14 3 332 124 440 6.56e-36 135
MS.gene44881.t1 MTR_7g102450 35.231 281 142 13 85 337 204 472 9.42e-36 135
MS.gene44881.t1 MTR_6g014290 33.226 310 177 14 47 341 188 482 1.01e-35 135
MS.gene44881.t1 MTR_4g094920 36.000 250 137 10 107 341 242 483 1.06e-35 135
MS.gene44881.t1 MTR_7g102520 36.638 232 133 6 122 341 263 492 1.13e-35 135
MS.gene44881.t1 MTR_1g107365 35.968 253 131 11 86 326 247 480 1.29e-35 135
MS.gene44881.t1 MTR_2g035040 29.589 365 209 15 3 335 36 384 1.36e-35 133
MS.gene44881.t1 MTR_1g107375 37.008 254 128 11 86 326 208 442 1.75e-35 134
MS.gene44881.t1 MTR_5g035560 30.447 358 210 15 2 341 119 455 2.74e-35 134
MS.gene44881.t1 MTR_5g016660 30.919 359 211 12 3 334 132 480 3.46e-35 134
MS.gene44881.t1 MTR_5g031840 33.223 301 172 11 47 334 174 458 7.61e-35 132
MS.gene44881.t1 MTR_7g070660 29.859 355 219 13 2 335 132 477 1.08e-34 132
MS.gene44881.t1 MTR_3g479520 34.848 264 147 9 83 334 229 479 1.31e-34 132
MS.gene44881.t1 MTR_8g071070 33.462 260 155 9 85 337 220 468 1.38e-34 132
MS.gene44881.t1 MTR_7g070800 29.752 363 210 11 2 335 127 473 1.86e-34 132
MS.gene44881.t1 MTR_5g075440 30.791 354 206 12 4 337 122 456 2.02e-34 131
MS.gene44881.t1 MTR_4g031800 29.944 354 215 11 4 337 132 472 2.07e-34 132
MS.gene44881.t1 MTR_7g102560 30.063 316 187 12 54 341 179 488 2.29e-34 132
MS.gene44881.t1 MTR_1g107380 29.296 355 208 13 3 335 137 470 2.30e-34 131
MS.gene44881.t1 MTR_3g069710 35.870 276 152 10 71 335 188 449 2.33e-34 131
MS.gene44881.t1 MTR_6g035265 28.371 356 222 12 3 335 126 471 2.46e-34 131
MS.gene44881.t1 MTR_7g070740 29.526 359 219 11 2 335 132 481 2.94e-34 131
MS.gene44881.t1 MTR_6g013990 33.955 268 148 10 86 340 230 481 2.96e-34 131
MS.gene44881.t1 MTR_0536s0010 28.652 356 215 13 3 335 135 474 4.20e-34 131
MS.gene44881.t1 MTR_5g072830 29.651 344 211 11 2 334 122 445 4.29e-34 130
MS.gene44881.t1 MTR_8g466240 30.058 346 200 15 4 326 116 442 5.62e-34 130
MS.gene44881.t1 MTR_7g080900 28.969 359 209 13 2 339 124 457 6.59e-34 130
MS.gene44881.t1 MTR_8g044140 29.508 366 210 13 2 335 97 446 9.16e-34 129
MS.gene44881.t1 MTR_2g008210 32.131 305 175 11 47 334 184 473 9.30e-34 130
MS.gene44881.t1 MTR_4g485640 29.692 357 213 13 3 334 320 663 1.20e-33 131
MS.gene44881.t1 MTR_8g083290 33.636 330 179 12 35 338 149 464 1.21e-33 129
MS.gene44881.t1 MTR_5g016480 28.056 360 221 14 3 341 132 474 1.22e-33 129
MS.gene44881.t1 MTR_7g070810 30.199 351 221 13 2 335 130 473 1.33e-33 129
MS.gene44881.t1 MTR_6g035185 28.134 359 223 12 3 335 131 480 1.64e-33 129
MS.gene44881.t1 MTR_5g045960 29.973 367 217 16 2 339 132 487 1.72e-33 129
MS.gene44881.t1 MTR_8g083280 35.115 262 145 9 86 340 221 464 1.76e-33 129
MS.gene44881.t1 MTR_5g031830 31.180 356 203 13 3 334 130 467 1.80e-33 129
MS.gene44881.t1 MTR_5g072840 29.167 336 207 11 2 326 122 437 2.18e-33 128
MS.gene44881.t1 MTR_6g013450 31.769 277 160 10 76 339 223 483 2.28e-33 129
MS.gene44881.t1 MTR_8g059425 28.375 363 224 12 2 341 133 482 2.47e-33 129
MS.gene44881.t1 MTR_3g009490 38.421 190 96 7 164 336 2 187 2.86e-33 122
MS.gene44881.t1 MTR_7g071040 30.411 365 209 15 2 335 138 488 4.01e-33 128
MS.gene44881.t1 MTR_1g040310 29.006 362 214 12 2 335 135 481 4.75e-33 128
MS.gene44881.t1 MTR_4g008630 38.191 199 106 9 113 303 234 423 5.44e-33 127
MS.gene44881.t1 MTR_7g070610 29.526 359 220 12 2 335 134 484 5.85e-33 128
MS.gene44881.t1 MTR_7g070860 29.661 354 208 11 2 335 128 460 6.04e-33 127
MS.gene44881.t1 MTR_5g072820 29.483 329 207 10 2 325 122 430 7.48e-33 127
MS.gene44881.t1 MTR_1g029540 36.548 197 113 8 113 303 230 420 9.12e-33 127
MS.gene44881.t1 MTR_6g014020 30.547 311 183 12 47 341 191 484 1.12e-32 127
MS.gene44881.t1 MTR_6g014220 32.967 273 154 9 75 334 218 474 1.20e-32 127
MS.gene44881.t1 MTR_4g117950 28.771 358 212 15 3 335 121 460 1.20e-32 127
MS.gene44881.t1 MTR_2g059240 36.471 255 131 10 85 326 221 457 1.30e-32 126
MS.gene44881.t1 MTR_6g014310 30.945 307 174 10 47 335 192 478 1.53e-32 126
MS.gene44881.t1 MTR_6g014150 30.707 368 209 16 2 341 132 481 1.79e-32 126
MS.gene44881.t1 MTR_3g479490 35.926 270 150 11 83 341 220 477 1.89e-32 126
MS.gene44881.t1 MTR_6g014190 30.976 297 168 10 62 341 15 291 1.99e-32 122
MS.gene44881.t1 MTR_3g069690 33.829 269 166 7 70 334 186 446 2.53e-32 125
MS.gene44881.t1 MTR_6g014270 33.455 275 160 10 77 341 222 483 3.79e-32 125
MS.gene44881.t1 MTR_7g013200 27.887 355 199 11 2 335 119 437 4.24e-32 125
MS.gene44881.t1 MTR_5g039900 29.589 365 207 14 2 334 134 480 4.64e-32 125
MS.gene44881.t1 MTR_7g070940 33.712 264 154 10 85 335 215 470 5.38e-32 125
MS.gene44881.t1 MTR_4g064987 30.519 308 179 13 4 302 124 405 6.41e-32 124
MS.gene44881.t1 MTR_7g011470 28.691 359 199 13 2 334 135 462 6.54e-32 124
MS.gene44881.t1 MTR_2g035020 32.971 276 157 10 83 335 209 479 7.40e-32 125
MS.gene44881.t1 MTR_5g098960 29.338 317 198 9 2 304 120 424 7.91e-32 124
MS.gene44881.t1 MTR_5g029800 29.248 359 218 12 3 335 127 475 8.25e-32 124
MS.gene44881.t1 MTR_5g031860 31.476 359 197 14 3 334 130 466 8.86e-32 124
MS.gene44881.t1 MTR_7g011470 29.861 288 160 8 66 334 194 458 1.11e-31 124
MS.gene44881.t1 MTR_8g009840 39.791 191 94 6 159 333 336 521 1.36e-31 124
MS.gene44881.t1 MTR_3g084520 30.946 349 207 12 4 326 121 461 1.63e-31 124
MS.gene44881.t1 MTR_6g035295 28.846 364 214 13 2 335 134 482 1.64e-31 124
MS.gene44881.t1 MTR_7g055710 29.096 354 227 10 2 335 132 481 1.88e-31 124
MS.gene44881.t1 MTR_5g058320 31.047 277 162 10 76 339 207 467 2.02e-31 123
MS.gene44881.t1 MTR_7g470610 31.159 276 173 6 2 275 7 267 2.71e-31 119
MS.gene44881.t1 MTR_7g070583 31.159 276 173 6 2 275 7 267 2.71e-31 119
MS.gene44881.t1 MTR_7g070780 28.226 372 207 13 2 335 132 481 4.92e-31 122
MS.gene44881.t1 MTR_4g128690 30.872 298 177 12 46 337 178 452 5.38e-31 122
MS.gene44881.t1 MTR_4g117980 32.616 279 154 10 83 335 209 479 5.67e-31 122
MS.gene44881.t1 MTR_7g080940 28.916 332 190 13 11 320 118 425 6.53e-31 122
MS.gene44881.t1 MTR_7g080935 28.659 328 196 11 11 320 118 425 8.21e-31 121
MS.gene44881.t1 MTR_4g108250 36.019 211 120 4 137 335 278 485 8.70e-31 122
MS.gene44881.t1 MTR_5g004940 35.023 217 121 7 119 335 179 375 9.43e-31 120
MS.gene44881.t1 MTR_7g012120 29.917 361 210 16 3 335 136 481 9.48e-31 122
MS.gene44881.t1 MTR_6g014187 30.496 282 161 10 76 341 222 484 1.11e-30 121
MS.gene44881.t1 MTR_4g024020 31.786 280 156 11 85 339 220 489 1.27e-30 121
MS.gene44881.t1 MTR_7g070910 37.674 215 111 7 137 335 275 482 1.31e-30 121
MS.gene44881.t1 MTR_2g034990 27.577 359 224 12 3 335 131 479 1.32e-30 121
MS.gene44881.t1 MTR_7g070870 34.130 293 171 12 47 335 182 456 1.34e-30 121
MS.gene44881.t1 MTR_6g013440 30.855 269 144 9 85 334 232 477 1.39e-30 121
MS.gene44881.t1 MTR_4g064987 30.744 309 183 15 4 302 124 411 2.53e-30 120
MS.gene44881.t1 MTR_8g032950 29.558 362 221 12 3 340 132 483 3.83e-30 120
MS.gene44881.t1 MTR_5g072860 34.426 244 130 7 94 326 230 454 4.00e-30 119
MS.gene44881.t1 MTR_6g014200 33.969 262 145 9 85 334 228 473 4.51e-30 119
MS.gene44881.t1 MTR_6g013900 31.541 279 162 11 76 341 221 483 5.12e-30 119
MS.gene44881.t1 MTR_7g080950 29.296 355 205 16 2 335 116 445 5.99e-30 119
MS.gene44881.t1 MTR_6g013960 28.280 343 198 12 12 341 177 484 6.89e-30 119
MS.gene44881.t1 MTR_5g067170 33.577 274 158 10 83 335 207 477 1.32e-29 118
MS.gene44881.t1 MTR_7g071050 39.796 196 105 5 137 326 230 418 1.36e-29 117
MS.gene44881.t1 MTR_6g013920 30.797 276 164 10 76 339 221 481 1.71e-29 118
MS.gene44881.t1 MTR_5g090650 31.933 238 122 9 1 222 106 319 1.87e-29 115
MS.gene44881.t1 MTR_3g084540 30.471 361 212 13 4 335 121 471 2.54e-29 117
MS.gene44881.t1 MTR_6g014170 33.333 243 141 9 110 341 234 466 3.27e-29 117
MS.gene44881.t1 MTR_7g070930 36.019 211 120 4 137 335 278 485 3.56e-29 117
MS.gene44881.t1 MTR_3g084530 29.248 359 218 12 4 335 121 470 7.27e-29 116
MS.gene44881.t1 MTR_0288s0020 30.000 300 164 11 47 334 192 457 7.51e-29 116
MS.gene44881.t1 MTR_6g011340 30.000 300 184 11 47 334 191 476 1.45e-28 115
MS.gene44881.t1 MTR_3g479470 30.164 305 179 11 2 282 133 427 1.79e-28 115
MS.gene44881.t1 MTR_7g013240 33.480 227 135 6 110 334 224 436 3.61e-28 114
MS.gene44881.t1 MTR_7g039550 34.746 236 136 7 111 334 29 258 3.72e-28 110
MS.gene44881.t1 MTR_7g013260 34.934 229 129 7 110 334 225 437 2.61e-27 111
MS.gene44881.t1 MTR_3g031400 29.086 361 201 14 2 340 125 452 2.90e-27 112
MS.gene44881.t1 MTR_3g031450 31.923 260 145 9 94 340 214 454 7.32e-27 110
MS.gene44881.t1 MTR_8g068360 37.500 168 92 6 125 285 252 413 7.39e-27 110
MS.gene44881.t1 MTR_5g027210 31.061 264 141 11 80 315 207 457 1.09e-26 110
MS.gene44881.t1 MTR_8g007585 32.850 207 128 6 137 341 199 396 1.66e-26 108
MS.gene44881.t1 MTR_7g013220 29.206 315 186 12 2 299 130 424 2.31e-26 108
MS.gene44881.t1 MTR_6g014240 27.577 359 201 12 2 334 118 443 2.35e-26 108
MS.gene44881.t1 MTR_8g068340 28.344 314 189 10 4 293 130 431 3.17e-26 108
MS.gene44881.t1 MTR_6g014300 30.741 270 154 11 77 339 225 468 1.09e-25 107
MS.gene44881.t1 MTR_5g072850 35.533 197 97 8 80 269 154 327 1.16e-25 106
MS.gene44881.t1 MTR_7g067120 34.419 215 115 9 107 317 214 406 1.33e-25 106
MS.gene44881.t1 MTR_8g068330 35.326 184 105 7 137 315 265 439 2.79e-25 106
MS.gene44881.t1 MTR_2086s0010 34.270 178 109 5 165 341 5 175 2.96e-25 100
MS.gene44881.t1 MTR_1996s0010 34.270 178 109 5 165 341 5 175 2.96e-25 100
MS.gene44881.t1 MTR_7g013180 32.883 222 130 7 110 327 231 437 6.26e-25 105
MS.gene44881.t1 MTR_4g128720 29.180 305 187 11 39 337 174 455 9.78e-25 104
MS.gene44881.t1 MTR_8g043470 32.381 210 123 7 138 341 186 382 1.52e-24 103
MS.gene44881.t1 MTR_0477s0010 31.884 207 113 7 138 334 125 313 1.70e-24 102
MS.gene44881.t1 MTR_8g056740 31.944 288 146 15 3 288 67 306 3.32e-24 102
MS.gene44881.t1 MTR_7g067330 37.059 170 90 6 107 275 214 367 5.98e-24 102
MS.gene44881.t1 MTR_6g014185 28.947 266 143 7 80 339 121 346 3.35e-23 99.4
MS.gene44881.t1 MTR_8g006230 30.928 194 125 5 2 192 65 252 4.23e-23 97.4
MS.gene44881.t1 MTR_5g066410 41.958 143 77 5 137 278 244 381 4.25e-23 99.8
MS.gene44881.t1 MTR_8g007565 41.958 143 77 5 137 278 268 405 1.06e-22 99.0
MS.gene44881.t1 MTR_8g007650 41.958 143 77 5 137 278 268 405 2.16e-22 97.8
MS.gene44881.t1 MTR_2g008226 28.692 237 155 8 67 302 207 430 2.90e-21 94.7
MS.gene44881.t1 MTR_2g046620 30.350 257 157 11 68 317 198 439 1.77e-20 92.4
MS.gene44881.t1 MTR_0536s0030 39.610 154 81 6 194 335 196 349 2.39e-20 90.9
MS.gene44881.t1 MTR_7g070760 30.088 226 109 6 65 287 26 205 2.60e-20 88.2
MS.gene44881.t1 MTR_4g123553 34.314 204 117 10 87 285 216 407 3.19e-20 91.7
MS.gene44881.t1 MTR_7g070995 38.732 142 75 4 206 335 1 142 3.36e-20 86.3
MS.gene44881.t1 MTR_6g014160 30.208 192 89 6 76 260 204 357 3.59e-20 90.9
MS.gene44881.t1 MTR_2g008220 31.441 229 140 9 62 285 195 411 1.72e-19 89.4
MS.gene44881.t1 MTR_5g066390 34.058 138 83 4 207 341 87 219 2.75e-19 85.5
MS.gene44881.t1 MTR_4g079250 32.203 236 136 9 116 341 241 462 4.60e-19 88.2
MS.gene44881.t1 MTR_4g079270 30.508 236 136 7 73 307 200 408 5.39e-19 87.8
MS.gene44881.t1 MTR_1g107325 35.659 129 76 3 203 326 215 341 7.26e-19 86.7
MS.gene44881.t1 MTR_6g014000 33.858 127 71 3 211 332 32 150 2.55e-18 86.3
MS.gene44881.t1 MTR_2g008225 32.990 194 108 8 95 285 238 412 6.80e-18 84.7
MS.gene44881.t1 MTR_2g014900 25.159 314 210 11 4 308 123 420 7.87e-18 84.3
MS.gene44881.t1 MTR_6g052375 33.333 198 107 8 30 222 17 194 3.27e-17 81.6
MS.gene44881.t1 MTR_6g036650 28.947 228 147 8 62 285 201 417 5.80e-17 82.0
MS.gene44881.t1 MTR_4g077960 31.034 203 125 8 87 285 193 384 8.32e-17 81.3
MS.gene44881.t1 MTR_0078s0200 28.061 196 128 7 2 192 125 312 1.73e-16 79.3
MS.gene44881.t1 MTR_3g435310 35.526 152 85 6 137 285 225 366 1.97e-16 80.1
MS.gene44881.t1 MTR_4g059370 26.923 208 138 7 73 277 131 327 1.45e-15 77.4
MS.gene44881.t1 MTR_6g042310 35.417 144 80 6 137 277 269 402 1.67e-15 77.4
MS.gene44881.t1 MTR_1g090270 31.250 144 93 4 137 277 260 400 1.59e-13 71.6
MS.gene44881.t1 MTR_2g083480 30.732 205 127 8 111 313 236 427 3.93e-12 67.4
MS.gene44881.t1 MTR_2g083430 31.250 208 124 9 111 314 236 428 8.02e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44881.t1 AT1G07260 49.275 345 164 6 1 338 132 472 8.03e-114 338
MS.gene44881.t1 AT2G29730 50.440 341 153 8 1 334 128 459 2.66e-112 334
MS.gene44881.t1 AT2G29740 50.000 342 158 7 1 335 137 472 1.06e-109 328
MS.gene44881.t1 AT1G07250 47.965 344 167 7 3 339 136 474 2.60e-107 322
MS.gene44881.t1 AT2G29710 49.275 345 160 8 1 338 127 463 4.75e-105 316
MS.gene44881.t1 AT1G07240 46.857 350 167 10 1 337 133 476 1.08e-102 310
MS.gene44881.t1 AT2G29750 47.246 345 170 8 1 339 137 475 2.36e-99 302
MS.gene44881.t1 AT3G21760 44.944 356 168 9 1 334 128 477 1.73e-95 292
MS.gene44881.t1 AT3G21780 45.152 361 170 10 1 340 118 471 1.47e-91 282
MS.gene44881.t1 AT4G15280 43.889 360 175 10 1 340 124 476 4.83e-88 273
MS.gene44881.t1 AT4G15280 43.889 360 175 10 1 340 156 508 8.59e-88 273
MS.gene44881.t1 AT3G21800 44.126 349 166 11 1 326 122 464 9.63e-88 272
MS.gene44881.t1 AT3G21790 43.889 360 168 12 1 335 126 476 9.12e-87 270
MS.gene44881.t1 AT3G21750 40.934 364 183 10 1 340 116 471 4.46e-85 265
MS.gene44881.t1 AT4G15260 42.382 361 178 11 1 340 6 357 7.08e-85 261
MS.gene44881.t1 AT3G16520 36.364 341 184 14 1 324 125 449 2.87e-62 205
MS.gene44881.t1 AT3G16520 36.182 351 188 15 1 334 125 456 9.07e-62 204
MS.gene44881.t1 AT3G16520 38.217 314 166 13 1 302 125 422 1.07e-61 204
MS.gene44881.t1 AT4G01070 36.306 314 179 7 2 303 124 428 4.07e-56 190
MS.gene44881.t1 AT1G01420 34.940 332 192 8 3 320 125 446 1.58e-55 188
MS.gene44881.t1 AT1G01420 34.940 332 192 8 3 320 128 449 1.67e-55 188
MS.gene44881.t1 AT2G18560 33.714 350 192 12 6 330 35 369 1.99e-51 175
MS.gene44881.t1 AT2G18570 35.802 324 173 13 1 299 120 433 3.58e-51 176
MS.gene44881.t1 AT1G01390 32.194 351 215 7 3 339 125 466 7.09e-50 173
MS.gene44881.t1 AT1G01390 32.194 351 215 7 3 339 142 483 1.37e-49 173
MS.gene44881.t1 AT3G50740 31.880 367 199 14 2 335 123 471 4.90e-48 169
MS.gene44881.t1 AT5G26310 31.793 368 189 16 4 333 120 463 1.05e-45 162
MS.gene44881.t1 AT4G36770 32.456 342 189 13 2 319 119 442 1.02e-44 159
MS.gene44881.t1 AT2G15480 33.141 347 212 9 2 335 139 478 5.17e-44 158
MS.gene44881.t1 AT4G34138 34.091 352 193 15 4 335 144 476 4.86e-42 152
MS.gene44881.t1 AT2G15480 32.022 356 212 9 3 335 140 488 5.06e-42 152
MS.gene44881.t1 AT5G66690 31.686 344 189 13 4 320 120 444 8.59e-42 152
MS.gene44881.t1 AT1G22400 32.456 342 182 13 2 316 133 452 1.19e-41 151
MS.gene44881.t1 AT2G15490 31.519 349 215 10 2 335 136 475 3.45e-40 147
MS.gene44881.t1 AT1G22380 30.707 368 199 14 2 335 133 478 3.75e-40 147
MS.gene44881.t1 AT5G12890 32.022 356 201 13 4 335 141 479 7.75e-40 147
MS.gene44881.t1 AT2G31790 31.410 312 174 10 47 337 164 456 8.32e-40 146
MS.gene44881.t1 AT2G15490 31.714 350 214 11 3 335 137 478 2.73e-39 145
MS.gene44881.t1 AT4G15480 28.994 338 219 9 1 326 139 467 6.07e-39 144
MS.gene44881.t1 AT1G22360 32.558 344 188 14 2 319 130 455 8.81e-39 144
MS.gene44881.t1 AT2G23260 32.646 291 156 9 54 326 174 442 3.64e-38 141
MS.gene44881.t1 AT1G10400 32.378 349 197 14 5 335 133 460 4.34e-38 141
MS.gene44881.t1 AT5G14860 35.088 285 160 13 67 341 210 479 5.45e-38 142
MS.gene44881.t1 AT3G46680 31.085 341 212 12 5 337 124 449 1.05e-37 140
MS.gene44881.t1 AT1G22360 32.092 349 200 13 2 323 130 468 3.64e-37 139
MS.gene44881.t1 AT2G23250 34.328 268 152 8 76 334 180 432 4.84e-37 138
MS.gene44881.t1 AT5G05870 32.682 358 196 17 4 339 125 459 6.51e-37 138
MS.gene44881.t1 AT5G59580 31.343 335 213 8 6 335 123 445 5.02e-36 135
MS.gene44881.t1 AT4G34131 35.821 268 146 12 83 335 221 477 6.70e-36 135
MS.gene44881.t1 AT1G22340 33.528 343 187 14 2 319 133 459 6.81e-36 136
MS.gene44881.t1 AT2G43820 32.776 299 147 14 64 334 171 443 1.47e-35 134
MS.gene44881.t1 AT2G36750 31.844 358 212 14 4 337 135 484 1.92e-35 135
MS.gene44881.t1 AT1G73880 32.143 280 170 9 8 276 136 406 2.12e-35 134
MS.gene44881.t1 AT3G53160 33.447 293 165 12 71 341 203 487 2.65e-35 134
MS.gene44881.t1 AT3G46670 30.612 343 214 11 4 337 121 448 2.69e-35 134
MS.gene44881.t1 AT1G78270 30.387 362 208 13 2 335 133 478 3.80e-35 134
MS.gene44881.t1 AT4G34135 36.087 230 127 9 83 302 222 441 6.60e-35 133
MS.gene44881.t1 AT1G51210 31.429 280 164 10 6 277 138 397 6.96e-35 132
MS.gene44881.t1 AT1G22370 32.770 296 168 12 2 277 133 417 1.20e-34 132
MS.gene44881.t1 AT2G36970 29.653 317 182 13 24 326 170 459 1.33e-34 132
MS.gene44881.t1 AT4G15500 29.752 363 217 14 1 341 124 470 1.37e-34 132
MS.gene44881.t1 AT3G21560 30.484 351 214 13 1 335 134 470 1.74e-34 132
MS.gene44881.t1 AT2G30140 29.526 359 207 14 2 341 124 455 1.91e-34 131
MS.gene44881.t1 AT5G59590 29.032 341 215 10 7 337 126 449 2.23e-34 131
MS.gene44881.t1 AT2G36780 31.198 359 214 13 4 337 139 489 2.37e-34 132
MS.gene44881.t1 AT2G36800 31.933 357 215 16 4 337 137 488 3.29e-34 131
MS.gene44881.t1 AT2G43840 31.071 280 151 11 54 319 167 418 4.43e-34 130
MS.gene44881.t1 AT2G43840 31.071 280 151 11 54 319 167 418 5.21e-34 130
MS.gene44881.t1 AT3G46650 30.211 331 189 11 4 325 123 420 7.05e-34 129
MS.gene44881.t1 AT2G36760 29.330 358 222 14 4 337 139 489 1.08e-33 130
MS.gene44881.t1 AT4G15490 29.167 360 220 13 1 341 127 470 1.16e-33 129
MS.gene44881.t1 AT3G46660 30.145 345 212 11 5 337 128 455 2.95e-33 128
MS.gene44881.t1 AT2G30140 29.330 358 208 14 2 341 124 454 3.54e-33 128
MS.gene44881.t1 AT2G31750 30.686 277 159 8 80 340 198 457 3.59e-33 128
MS.gene44881.t1 AT3G53150 33.220 295 143 12 85 339 231 511 3.61e-33 129
MS.gene44881.t1 AT1G05560 32.948 346 182 17 4 326 122 440 4.95e-33 128
MS.gene44881.t1 AT2G36770 29.834 362 215 15 4 337 139 489 5.82e-33 128
MS.gene44881.t1 AT1G05560 32.948 346 182 17 4 326 172 490 6.05e-33 128
MS.gene44881.t1 AT2G31750 30.996 271 154 8 80 334 198 451 1.13e-32 126
MS.gene44881.t1 AT3G46700 32.258 279 174 8 59 334 175 441 1.65e-32 126
MS.gene44881.t1 AT3G11340 33.083 266 155 9 76 334 192 441 1.78e-32 126
MS.gene44881.t1 AT3G46690 29.769 346 213 12 4 337 122 449 1.97e-32 126
MS.gene44881.t1 AT5G03490 29.769 346 205 14 3 334 138 459 3.08e-32 125
MS.gene44881.t1 AT2G30150 34.454 238 118 9 111 334 220 433 3.28e-32 125
MS.gene44881.t1 AT1G22370 34.286 245 136 9 47 277 14 247 5.15e-32 122
MS.gene44881.t1 AT2G30150 34.454 238 118 9 111 334 236 449 5.82e-32 124
MS.gene44881.t1 AT5G17030 31.801 261 150 7 85 338 217 456 8.83e-32 124
MS.gene44881.t1 AT2G28080 30.897 301 176 13 47 335 189 469 1.60e-31 124
MS.gene44881.t1 AT3G55700 32.721 272 158 9 70 334 194 447 3.38e-31 122
MS.gene44881.t1 AT1G05675 31.047 277 150 8 80 337 198 452 1.05e-30 121
MS.gene44881.t1 AT2G16890 33.455 275 153 13 78 340 214 470 1.25e-30 121
MS.gene44881.t1 AT5G38010 29.395 347 213 13 4 337 126 453 1.54e-30 120
MS.gene44881.t1 AT1G05680 32.342 269 155 9 80 336 198 451 5.26e-30 119
MS.gene44881.t1 AT4G14090 30.847 295 176 10 47 335 181 453 8.10e-30 119
MS.gene44881.t1 AT5G05860 31.594 345 203 12 4 335 121 445 1.99e-29 117
MS.gene44881.t1 AT5G38040 30.897 301 180 12 43 337 171 449 2.03e-29 117
MS.gene44881.t1 AT5G17040 32.941 255 147 7 86 335 100 335 3.42e-29 115
MS.gene44881.t1 AT1G05530 33.219 292 160 12 54 326 168 443 4.56e-29 116
MS.gene44881.t1 AT5G05880 32.677 254 147 8 91 335 208 446 4.60e-29 116
MS.gene44881.t1 AT5G05900 33.984 256 141 10 86 335 212 445 4.83e-29 116
MS.gene44881.t1 AT2G36790 29.775 356 225 13 3 337 137 488 5.21e-29 117
MS.gene44881.t1 AT4G15550 31.008 258 157 7 86 335 227 471 5.72e-29 116
MS.gene44881.t1 AT1G24100 30.882 272 144 10 86 335 207 456 8.03e-29 116
MS.gene44881.t1 AT5G17050 31.939 263 145 9 85 338 220 457 1.33e-28 115
MS.gene44881.t1 AT5G17040 32.296 257 146 7 86 335 202 437 1.33e-28 115
MS.gene44881.t1 AT3G55710 32.157 255 148 8 76 311 191 439 3.36e-28 114
MS.gene44881.t1 AT2G16890 35.294 221 123 10 78 294 214 418 2.52e-27 111
MS.gene44881.t1 AT5G49690 30.479 292 175 12 4 285 128 401 2.56e-27 112
MS.gene44881.t1 AT4G01070 32.609 230 136 6 2 219 124 346 3.27e-27 110
MS.gene44881.t1 AT5G05890 28.655 342 217 10 4 335 126 450 4.41e-27 111
MS.gene44881.t1 AT2G26480 30.142 282 186 8 59 338 174 446 1.35e-26 109
MS.gene44881.t1 AT1G30530 28.923 325 180 13 23 339 171 452 2.51e-26 108
MS.gene44881.t1 AT1G06000 29.964 277 174 9 73 337 165 433 1.35e-25 107
MS.gene44881.t1 AT5G37950 31.600 250 160 9 4 252 98 337 2.24e-25 105
MS.gene44881.t1 AT3G46720 27.697 343 210 11 4 334 121 437 2.42e-25 106
MS.gene44881.t1 AT3G22250 30.085 236 143 7 88 316 220 440 3.32e-25 105
MS.gene44881.t1 AT5G37950 35.385 195 117 7 59 252 157 343 9.22e-25 103
MS.gene44881.t1 AT5G65550 33.333 174 104 6 130 302 260 422 7.16e-23 99.4
MS.gene44881.t1 AT5G54060 32.806 253 141 10 67 314 208 436 1.57e-21 95.5
MS.gene44881.t1 AT3G02100 26.087 345 222 8 2 335 135 457 1.86e-20 92.4
MS.gene44881.t1 AT2G22590 30.415 217 130 9 105 315 244 445 1.44e-19 89.7
MS.gene44881.t1 AT4G27560 32.692 208 124 7 75 277 188 384 6.32e-19 87.8
MS.gene44881.t1 AT4G27570 32.692 208 124 7 75 277 188 384 2.03e-18 86.3
MS.gene44881.t1 AT2G22930 28.099 242 158 8 73 313 184 410 8.59e-18 84.3
MS.gene44881.t1 AT5G54010 25.879 313 203 12 3 308 121 411 2.04e-17 83.2
MS.gene44881.t1 AT3G29630 32.487 197 120 7 112 306 221 406 2.08e-17 83.2
MS.gene44881.t1 AT1G64910 32.143 168 104 5 112 278 221 379 2.54e-17 83.2
MS.gene44881.t1 AT3G29630 31.633 196 122 6 112 306 196 380 3.72e-17 82.4
MS.gene44881.t1 AT1G64920 29.911 224 140 8 61 278 171 383 5.10e-17 82.0
MS.gene44881.t1 AT5G53990 27.311 238 155 9 73 308 184 405 9.35e-17 81.3
MS.gene44881.t1 AT4G09500 34.320 169 100 6 147 313 226 385 1.59e-14 74.3
MS.gene44881.t1 AT4G09500 34.320 169 100 6 147 313 251 410 1.99e-14 74.3
MS.gene44881.t1 AT1G50580 32.642 193 116 7 116 306 224 404 6.66e-14 72.8

Find 69 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCCCACAAGTTGAGATTT+TGG 0.196406 5.2:+59293168 MS.gene44881:CDS
TCTTCATAATTGTTAGTTCT+TGG 0.220512 5.2:-59293079 None:intergenic
GATCCTGAGTTATTGATTCC+TGG 0.286243 5.2:+59292641 MS.gene44881:CDS
AGCTGTTGTTCTGCATAAAT+AGG 0.311024 5.2:-59293280 None:intergenic
AAAATCCAACATTTGATGTT+AGG 0.320269 5.2:-59292562 None:intergenic
TAAATAGGCCATGTCAATAT+TGG 0.331068 5.2:-59293265 None:intergenic
TTTAGGTTGGTGAAGGAATT+GGG 0.352487 5.2:+59293310 MS.gene44881:CDS
GATTGATCTAACTTAGAGTT+AGG 0.363217 5.2:-59292890 None:intergenic
GGGTCTTCTTTCATTTCTGT+TGG 0.366581 5.2:+59293487 MS.gene44881:CDS
GGTATTAACAATAATTCCTT+TGG 0.371432 5.2:-59292765 None:intergenic
TCTCCGAGCAAGGTTGTAAT+AGG 0.375634 5.2:-59292732 None:intergenic
TTGAGAGTGGATTATAGAAT+AGG 0.376468 5.2:+59293346 MS.gene44881:CDS
ATTCCTCCTATCTATGCTAT+TGG 0.384342 5.2:+59292842 MS.gene44881:CDS
GGAAGCATGGGAGTTAGCTT+TGG 0.385426 5.2:+59292980 MS.gene44881:CDS
GAAAGGGTTGAAGCATTTGA+TGG 0.386348 5.2:+59293402 MS.gene44881:CDS
GGTCTTCTTTCATTTCTGTT+GGG 0.394891 5.2:+59293488 MS.gene44881:CDS
CAAATAAGAGAAATAGCATT+AGG 0.397811 5.2:+59293010 MS.gene44881:CDS
AATATGATCTTATATTGAAA+TGG 0.421066 5.2:+59292915 MS.gene44881:CDS
TTAGAATGGATGGAATTAGA+AGG 0.431299 5.2:+59293124 MS.gene44881:CDS
GCTAGGAACGCTGTTCTTTG+TGG 0.442272 5.2:+59293463 MS.gene44881:CDS
GCTATTTCTCTTATTTGAGA+TGG 0.451667 5.2:-59293004 None:intergenic
ATGGCTGAGGAGATTGAGAA+AGG 0.457096 5.2:+59293385 MS.gene44881:CDS
GAAGGAATTGGGATTGGCGG+TGG 0.458392 5.2:+59293321 MS.gene44881:CDS
ATGGATGGAATTAGAAGGTA+AGG 0.460474 5.2:+59293129 MS.gene44881:CDS
GCCCCAAAATCTCAACTTGT+GGG 0.462646 5.2:-59293171 None:intergenic
GCATTTGGTAAAACACTAGA+AGG 0.464367 5.2:-59292680 None:intergenic
TCATAATTGTTAGTTCTTGG+TGG 0.464406 5.2:-59293076 None:intergenic
AGGTAGTAAAGAACTTGTTA+TGG 0.474178 5.2:+59293366 MS.gene44881:CDS
TCTCTGCTATAAGCAGCATT+TGG 0.476167 5.2:-59292695 None:intergenic
AAAGGACCAATAGCATAGAT+AGG 0.476247 5.2:-59292848 None:intergenic
GATGTTAGGAACAAATAAGA+AGG 0.478461 5.2:-59292548 None:intergenic
AGGAACGCTGTTCTTTGTGG+TGG 0.491754 5.2:+59293466 MS.gene44881:CDS
GGTGAAGGAATTGGGATTGG+CGG 0.496331 5.2:+59293318 MS.gene44881:CDS
AGAAAATTCAAGAGATGGCT+AGG 0.497558 5.2:+59293446 MS.gene44881:CDS
ATTGGCGGTGGAGTTGAGAG+TGG 0.499734 5.2:+59293333 MS.gene44881:CDS
GCTTAAGAAAATTCAAGAGA+TGG 0.510362 5.2:+59293441 MS.gene44881:CDS
TGTCTTTCAATGATTGATGT+TGG 0.510434 5.2:+59292509 None:intergenic
TTGGGGCATAAGGCTATTGG+TGG 0.512227 5.2:+59293187 MS.gene44881:CDS
TAGCAGAGATGGTGGTTATG+AGG 0.512622 5.2:+59292709 MS.gene44881:CDS
GGTGGATTTGTTTCACATTG+TGG 0.516267 5.2:+59293205 MS.gene44881:CDS
GTAAGGGAATGATATGTGAA+TGG 0.516461 5.2:+59293146 MS.gene44881:CDS
GTTGGTGAAGGAATTGGGAT+TGG 0.518715 5.2:+59293315 MS.gene44881:CDS
TGAACACGTCGTTGACTCGA+CGG 0.519265 5.2:-59292610 None:intergenic
GGAACGCTGTTCTTTGTGGT+GGG 0.520412 5.2:+59293467 MS.gene44881:CDS
GATTTGTTTCACATTGTGGA+TGG 0.524177 5.2:+59293209 MS.gene44881:CDS
ATATTGTTCCAAACCTGAAA+AGG 0.525009 5.2:-59292786 None:intergenic
AGGCCTATTACAACCTTGCT+CGG 0.526960 5.2:+59292729 MS.gene44881:CDS
TGGCTGAGGAGATTGAGAAA+GGG 0.538297 5.2:+59293386 MS.gene44881:CDS
ATTGATGTTGGAAATGAACT+TGG 0.540616 5.2:+59292521 MS.gene44881:CDS
TAAGGGAATGATATGTGAAT+GGG 0.542556 5.2:+59293147 MS.gene44881:CDS
AAGAGAAAAGATTACCAGAA+GGG 0.545254 5.2:+59293098 MS.gene44881:CDS
TGCCCCAAAATCTCAACTTG+TGG 0.545535 5.2:-59293172 None:intergenic
TGTCGTTGATTCTCCGAGCA+AGG 0.546114 5.2:-59292742 None:intergenic
TTGTTCCTAACATCAAATGT+TGG 0.550677 5.2:+59292557 MS.gene44881:CDS
GGTACTAAATTTGCGAAACC+AGG 0.555883 5.2:-59292659 None:intergenic
ATGTTAGGAACAAATAAGAA+GGG 0.556728 5.2:-59292547 None:intergenic
GCATTAGGACTTAAGCATAG+TGG 0.558018 5.2:+59293025 MS.gene44881:CDS
TAAAGAACTTGTTATGGCTG+AGG 0.561283 5.2:+59293372 MS.gene44881:CDS
GGTCCTTTGTTAGATCTCAA+AGG 0.569953 5.2:+59292863 MS.gene44881:CDS
AATGCTGCTTATAGCAGAGA+TGG 0.578654 5.2:+59292698 MS.gene44881:CDS
GAAGAGAAAAGATTACCAGA+AGG 0.592323 5.2:+59293097 MS.gene44881:CDS
GGACCAATAGCATAGATAGG+AGG 0.601494 5.2:-59292845 None:intergenic
AAACCAGGAATCAATAACTC+AGG 0.608516 5.2:-59292644 None:intergenic
CGGAGAATCAACGACACCAA+AGG 0.621774 5.2:+59292749 MS.gene44881:CDS
TTGGTGTGCCAATATTGACA+TGG 0.631956 5.2:+59293257 MS.gene44881:CDS
CCCCAAAATCTCAACTTGTG+GGG 0.644624 5.2:-59293170 None:intergenic
GCTGCTTATAGCAGAGATGG+TGG 0.653029 5.2:+59292701 MS.gene44881:CDS
TGGATGGAATTAGAAGGTAA+GGG 0.658594 5.2:+59293130 MS.gene44881:CDS
TGACCTTTGAGATCTAACAA+AGG 0.729571 5.2:-59292866 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATGATCTTATATTGAAA+TGG + chr5.2:59292915-59292934 MS.gene44881:CDS 15.0%
!!! AGAAAAACAACTGATTTATT+TGG - chr5.2:59292953-59292972 None:intergenic 20.0%
!!! ATTATTGTTAATACCTTTTC+AGG + chr5.2:59292773-59292792 MS.gene44881:CDS 20.0%
!!! ATTCTATTTTAGAAAGTTTG+TGG + chr5.2:59293233-59293252 MS.gene44881:CDS 20.0%
! AAAATCCAACATTTGATGTT+AGG - chr5.2:59292565-59292584 None:intergenic 25.0%
! ATGTTAGGAACAAATAAGAA+GGG - chr5.2:59292550-59292569 None:intergenic 25.0%
! CAAATAAGAGAAATAGCATT+AGG + chr5.2:59293010-59293029 MS.gene44881:CDS 25.0%
! GGTATTAACAATAATTCCTT+TGG - chr5.2:59292768-59292787 None:intergenic 25.0%
!! ACATCAAATGTTGGATTTTT+AGG + chr5.2:59292566-59292585 MS.gene44881:CDS 25.0%
!! TAGTGGAGTTAAATTTTTGT+GGG + chr5.2:59293042-59293061 MS.gene44881:CDS 25.0%
!! TCTTCATAATTGTTAGTTCT+TGG - chr5.2:59293082-59293101 None:intergenic 25.0%
!!! ATAGTGGAGTTAAATTTTTG+TGG + chr5.2:59293041-59293060 MS.gene44881:CDS 25.0%
!!! ATTTTAGAAAGTTTGTGGTT+TGG + chr5.2:59293238-59293257 MS.gene44881:CDS 25.0%
!!! TCAGTTGTTTTTCTATGTTT+TGG + chr5.2:59292959-59292978 MS.gene44881:CDS 25.0%
AAGAGAAAAGATTACCAGAA+GGG + chr5.2:59293098-59293117 MS.gene44881:CDS 30.0%
ATATTGTTCCAAACCTGAAA+AGG - chr5.2:59292789-59292808 None:intergenic 30.0%
ATTGATGTTGGAAATGAACT+TGG + chr5.2:59292521-59292540 MS.gene44881:CDS 30.0%
GATGTTAGGAACAAATAAGA+AGG - chr5.2:59292551-59292570 None:intergenic 30.0%
GATTGATCTAACTTAGAGTT+AGG - chr5.2:59292893-59292912 None:intergenic 30.0%
GCTTAAGAAAATTCAAGAGA+TGG + chr5.2:59293441-59293460 MS.gene44881:CDS 30.0%
TAAATAGGCCATGTCAATAT+TGG - chr5.2:59293268-59293287 None:intergenic 30.0%
TAAGGGAATGATATGTGAAT+GGG + chr5.2:59293147-59293166 MS.gene44881:CDS 30.0%
TTAGAATGGATGGAATTAGA+AGG + chr5.2:59293124-59293143 MS.gene44881:CDS 30.0%
TTGTTCCTAACATCAAATGT+TGG + chr5.2:59292557-59292576 MS.gene44881:CDS 30.0%
! AACAACAGCTTAATGCTTTT+AGG + chr5.2:59293293-59293312 MS.gene44881:CDS 30.0%
! TCATAATTGTTAGTTCTTGG+TGG - chr5.2:59293079-59293098 None:intergenic 30.0%
!! AGGTAGTAAAGAACTTGTTA+TGG + chr5.2:59293366-59293385 MS.gene44881:CDS 30.0%
!! GCTATTTCTCTTATTTGAGA+TGG - chr5.2:59293007-59293026 None:intergenic 30.0%
!! TTGAGAGTGGATTATAGAAT+AGG + chr5.2:59293346-59293365 MS.gene44881:CDS 30.0%
!!! TGTTAATACCTTTTCAGGTT+TGG + chr5.2:59292778-59292797 MS.gene44881:CDS 30.0%
!!! TTTCTATGTTTTGGAAGCAT+GGG + chr5.2:59292968-59292987 MS.gene44881:CDS 30.0%
!!! TTTTCTATGTTTTGGAAGCA+TGG + chr5.2:59292967-59292986 MS.gene44881:CDS 30.0%
AAACCAGGAATCAATAACTC+AGG - chr5.2:59292647-59292666 None:intergenic 35.0%
AAAGGACCAATAGCATAGAT+AGG - chr5.2:59292851-59292870 None:intergenic 35.0%
AGAAAATTCAAGAGATGGCT+AGG + chr5.2:59293446-59293465 MS.gene44881:CDS 35.0%
AGCTGTTGTTCTGCATAAAT+AGG - chr5.2:59293283-59293302 None:intergenic 35.0%
ATGGATGGAATTAGAAGGTA+AGG + chr5.2:59293129-59293148 MS.gene44881:CDS 35.0%
ATTCCTCCTATCTATGCTAT+TGG + chr5.2:59292842-59292861 MS.gene44881:CDS 35.0%
GAAGAGAAAAGATTACCAGA+AGG + chr5.2:59293097-59293116 MS.gene44881:CDS 35.0%
GCATTTGGTAAAACACTAGA+AGG - chr5.2:59292683-59292702 None:intergenic 35.0%
GGTCTTCTTTCATTTCTGTT+GGG + chr5.2:59293488-59293507 MS.gene44881:CDS 35.0%
GTAAGGGAATGATATGTGAA+TGG + chr5.2:59293146-59293165 MS.gene44881:CDS 35.0%
TGGATGGAATTAGAAGGTAA+GGG + chr5.2:59293130-59293149 MS.gene44881:CDS 35.0%
! ATCCATTCTAAAAACCCTTC+TGG - chr5.2:59293115-59293134 None:intergenic 35.0%
! GATTTGTTTCACATTGTGGA+TGG + chr5.2:59293209-59293228 MS.gene44881:CDS 35.0%
!! ACAGCTTAATGCTTTTAGGT+TGG + chr5.2:59293297-59293316 MS.gene44881:CDS 35.0%
!! TAAAGAACTTGTTATGGCTG+AGG + chr5.2:59293372-59293391 MS.gene44881:CDS 35.0%
!! TACCAGAAGGGTTTTTAGAA+TGG + chr5.2:59293110-59293129 MS.gene44881:CDS 35.0%
!! TGACCTTTGAGATCTAACAA+AGG - chr5.2:59292869-59292888 None:intergenic 35.0%
!! TTTAGGTTGGTGAAGGAATT+GGG + chr5.2:59293310-59293329 MS.gene44881:CDS 35.0%
!!! AGAAGGGTTTTTAGAATGGA+TGG + chr5.2:59293114-59293133 MS.gene44881:CDS 35.0%
!!! TAATGCTTTTAGGTTGGTGA+AGG + chr5.2:59293303-59293322 MS.gene44881:CDS 35.0%
!!! TTTTAGGTTGGTGAAGGAAT+TGG + chr5.2:59293309-59293328 MS.gene44881:CDS 35.0%
GCATTAGGACTTAAGCATAG+TGG + chr5.2:59293025-59293044 MS.gene44881:CDS 40.0%
GGGTCTTCTTTCATTTCTGT+TGG + chr5.2:59293487-59293506 MS.gene44881:CDS 40.0%
GGTACTAAATTTGCGAAACC+AGG - chr5.2:59292662-59292681 None:intergenic 40.0%
GGTCCTTTGTTAGATCTCAA+AGG + chr5.2:59292863-59292882 MS.gene44881:CDS 40.0%
TCTCTGCTATAAGCAGCATT+TGG - chr5.2:59292698-59292717 None:intergenic 40.0%
TTGGTGTGCCAATATTGACA+TGG + chr5.2:59293257-59293276 MS.gene44881:CDS 40.0%
! AATGCTGCTTATAGCAGAGA+TGG + chr5.2:59292698-59292717 MS.gene44881:CDS 40.0%
! GAAAGGGTTGAAGCATTTGA+TGG + chr5.2:59293402-59293421 MS.gene44881:CDS 40.0%
! GGTGGATTTGTTTCACATTG+TGG + chr5.2:59293205-59293224 MS.gene44881:CDS 40.0%
!! GATCCTGAGTTATTGATTCC+TGG + chr5.2:59292641-59292660 MS.gene44881:CDS 40.0%
!!! AGTTGAGATTTTGGGGCATA+AGG + chr5.2:59293177-59293196 MS.gene44881:CDS 40.0%
!!! ATTTTGGGGCATAAGGCTAT+TGG + chr5.2:59293184-59293203 MS.gene44881:CDS 40.0%
AGGCCTATTACAACCTTGCT+CGG + chr5.2:59292729-59292748 MS.gene44881:CDS 45.0%
ATGGCTGAGGAGATTGAGAA+AGG + chr5.2:59293385-59293404 MS.gene44881:CDS 45.0%
CCCCAAAATCTCAACTTGTG+GGG - chr5.2:59293173-59293192 None:intergenic 45.0%
GCCCCAAAATCTCAACTTGT+GGG - chr5.2:59293174-59293193 None:intergenic 45.0%
GGACCAATAGCATAGATAGG+AGG - chr5.2:59292848-59292867 None:intergenic 45.0%
TCTCCGAGCAAGGTTGTAAT+AGG - chr5.2:59292735-59292754 None:intergenic 45.0%
TGCCCCAAAATCTCAACTTG+TGG - chr5.2:59293175-59293194 None:intergenic 45.0%
TGGCTGAGGAGATTGAGAAA+GGG + chr5.2:59293386-59293405 MS.gene44881:CDS 45.0%
! GTTGGTGAAGGAATTGGGAT+TGG + chr5.2:59293315-59293334 MS.gene44881:CDS 45.0%
! TAGCAGAGATGGTGGTTATG+AGG + chr5.2:59292709-59292728 MS.gene44881:CDS 45.0%
!! CCCCACAAGTTGAGATTTTG+GGG + chr5.2:59293170-59293189 MS.gene44881:CDS 45.0%
!! GCCCCACAAGTTGAGATTTT+GGG + chr5.2:59293169-59293188 MS.gene44881:CDS 45.0%
!!! GTTGACTCGACGGTTTTGAA+GGG - chr5.2:59292603-59292622 None:intergenic 45.0%
AGGAACGCTGTTCTTTGTGG+TGG + chr5.2:59293466-59293485 MS.gene44881:CDS 50.0%
CGGAGAATCAACGACACCAA+AGG + chr5.2:59292749-59292768 MS.gene44881:CDS 50.0%
GCTAGGAACGCTGTTCTTTG+TGG + chr5.2:59293463-59293482 MS.gene44881:CDS 50.0%
GCTGCTTATAGCAGAGATGG+TGG + chr5.2:59292701-59292720 MS.gene44881:CDS 50.0%
GGAACGCTGTTCTTTGTGGT+GGG + chr5.2:59293467-59293486 MS.gene44881:CDS 50.0%
GGTGAAGGAATTGGGATTGG+CGG + chr5.2:59293318-59293337 MS.gene44881:CDS 50.0%
TTGGGGCATAAGGCTATTGG+TGG + chr5.2:59293187-59293206 MS.gene44881:CDS 50.0%
! GGAAGCATGGGAGTTAGCTT+TGG + chr5.2:59292980-59292999 MS.gene44881:CDS 50.0%
!! GGCCCCACAAGTTGAGATTT+TGG + chr5.2:59293168-59293187 MS.gene44881:CDS 50.0%
!! TGAACACGTCGTTGACTCGA+CGG - chr5.2:59292613-59292632 None:intergenic 50.0%
!! TGTCGTTGATTCTCCGAGCA+AGG - chr5.2:59292745-59292764 None:intergenic 50.0%
!!! CGTTGACTCGACGGTTTTGA+AGG - chr5.2:59292604-59292623 None:intergenic 50.0%
ATTGGCGGTGGAGTTGAGAG+TGG + chr5.2:59293333-59293352 MS.gene44881:CDS 55.0%
! GAAGGAATTGGGATTGGCGG+TGG + chr5.2:59293321-59293340 MS.gene44881:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 59292518 59293543 59292518 ID=MS.gene44881
chr5.2 mRNA 59292518 59293543 59292518 ID=MS.gene44881.t1;Parent=MS.gene44881
chr5.2 exon 59292518 59293543 59292518 ID=MS.gene44881.t1.exon1;Parent=MS.gene44881.t1
chr5.2 CDS 59292518 59293543 59292518 ID=cds.MS.gene44881.t1;Parent=MS.gene44881.t1
Gene Sequence

>MS.gene44881

ATGATTGATGTTGGAAATGAACTTGGTATCCCTTCTTATTTGTTCCTAACATCAAATGTTGGATTTTTAGGATTCATGCTTTCCCTTCAAAACCGTCGAGTCAACGACGTGTTCAATGATTCTGATCCTGAGTTATTGATTCCTGGTTTCGCAAATTTAGTACCTTCTAGTGTTTTACCAAATGCTGCTTATAGCAGAGATGGTGGTTATGAGGCCTATTACAACCTTGCTCGGAGAATCAACGACACCAAAGGAATTATTGTTAATACCTTTTCAGGTTTGGAACAATATTCTATTGATGCATTATATGATCATGATGAGAAAATTCCTCCTATCTATGCTATTGGTCCTTTGTTAGATCTCAAAGGTCAACCTAACTCTAAGTTAGATCAATCTCAATATGATCTTATATTGAAATGGCTAGATAAGCAGCCAAATAAATCAGTTGTTTTTCTATGTTTTGGAAGCATGGGAGTTAGCTTTGGTCCATCTCAAATAAGAGAAATAGCATTAGGACTTAAGCATAGTGGAGTTAAATTTTTGTGGGCTATGAAATCTCCACCAAGAACTAACAATTATGAAGAGAAAAGATTACCAGAAGGGTTTTTAGAATGGATGGAATTAGAAGGTAAGGGAATGATATGTGAATGGGCCCCACAAGTTGAGATTTTGGGGCATAAGGCTATTGGTGGATTTGTTTCACATTGTGGATGGAATTCTATTTTAGAAAGTTTGTGGTTTGGTGTGCCAATATTGACATGGCCTATTTATGCAGAACAACAGCTTAATGCTTTTAGGTTGGTGAAGGAATTGGGATTGGCGGTGGAGTTGAGAGTGGATTATAGAATAGGTAGTAAAGAACTTGTTATGGCTGAGGAGATTGAGAAAGGGTTGAAGCATTTGATGGAGAAAGATAATATTTTGCTTAAGAAAATTCAAGAGATGGCTAGGAACGCTGTTCTTTGTGGTGGGTCTTCTTTCATTTCTGTTGGGAAACTTATTGATATTATGATAGAAAGTAACTAA
Protein sequence

>MS.gene44881.t1

MIDVGNELGIPSYLFLTSNVGFLGFMLSLQNRRVNDVFNDSDPELLIPGFANLVPSSVLPNAAYSRDGGYEAYYNLARRINDTKGIIVNTFSGLEQYSIDALYDHDEKIPPIYAIGPLLDLKGQPNSKLDQSQYDLILKWLDKQPNKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVKFLWAMKSPPRTNNYEEKRLPEGFLEWMELEGKGMICEWAPQVEILGHKAIGGFVSHCGWNSILESLWFGVPILTWPIYAEQQLNAFRLVKELGLAVELRVDYRIGSKELVMAEEIEKGLKHLMEKDNILLKKIQEMARNAVLCGGSSFISVGKLIDIMIESN