AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017497

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017497.t1 MTR_5g098930 93.474 475 27 2 1 475 1 471 0.0 911
MS.gene017497.t1 MTR_5g090700 66.255 486 147 8 1 475 1 480 0.0 635
MS.gene017497.t1 MTR_5g090630 67.017 476 149 6 1 475 1 469 0.0 632
MS.gene017497.t1 MTR_5g090670 66.046 483 153 5 1 475 1 480 0.0 632
MS.gene017497.t1 MTR_5g090660 65.208 480 156 6 1 474 1 475 0.0 629
MS.gene017497.t1 MTR_5g090610 64.792 480 148 6 1 475 1 464 0.0 622
MS.gene017497.t1 MTR_5g090580 66.253 483 150 6 1 475 1 478 0.0 620
MS.gene017497.t1 MTR_5g090620 65.021 486 152 9 1 475 1 479 0.0 615
MS.gene017497.t1 MTR_5g090600 64.657 481 140 8 1 475 1 457 0.0 600
MS.gene017497.t1 MTR_5g090690 54.106 414 120 8 65 465 18 374 1.45e-128 378
MS.gene017497.t1 MTR_2g040530 44.167 480 239 12 1 469 1 462 2.96e-128 380
MS.gene017497.t1 MTR_5g090650 55.932 354 116 7 1 349 1 319 7.23e-122 359
MS.gene017497.t1 MTR_2g046820 43.125 480 242 12 1 469 1 460 1.18e-121 363
MS.gene017497.t1 MTR_2g046750 42.149 484 244 13 1 469 1 463 2.08e-121 363
MS.gene017497.t1 MTR_5g070040 40.787 483 251 12 2 472 8 467 5.60e-119 357
MS.gene017497.t1 MTR_5g070090 41.922 489 230 14 2 471 8 461 7.11e-116 348
MS.gene017497.t1 MTR_3g009510 32.591 494 288 18 1 469 1 474 8.90e-80 256
MS.gene017497.t1 MTR_8g465670 32.099 486 289 12 2 468 4 467 5.19e-73 238
MS.gene017497.t1 MTR_6g023665 32.985 479 287 15 2 467 10 467 1.09e-72 238
MS.gene017497.t1 MTR_8g006220 32.129 498 282 14 2 468 3 475 4.76e-72 236
MS.gene017497.t1 MTR_7g117170 34.599 474 280 15 6 467 16 471 5.12e-72 236
MS.gene017497.t1 MTR_6g488280 32.218 478 290 15 3 467 4 460 6.87e-71 233
MS.gene017497.t1 MTR_0428s0010 32.218 478 290 15 3 467 4 460 6.87e-71 233
MS.gene017497.t1 MTR_0184s0040 31.158 475 302 12 2 467 18 476 2.98e-70 231
MS.gene017497.t1 MTR_0078s0190 31.158 475 302 12 2 467 18 476 2.98e-70 231
MS.gene017497.t1 MTR_5g019580 30.515 485 298 14 2 464 4 471 9.04e-69 228
MS.gene017497.t1 MTR_8g077590 31.579 475 290 13 6 467 10 462 2.66e-67 223
MS.gene017497.t1 MTR_8g027870 33.898 472 266 18 6 460 19 461 3.91e-67 223
MS.gene017497.t1 MTR_8g006730 30.722 485 292 16 2 467 3 462 4.53e-67 223
MS.gene017497.t1 MTR_8g006710 29.835 486 306 15 2 473 3 467 8.23e-67 222
MS.gene017497.t1 MTR_8g027885 33.404 470 271 18 6 460 19 461 1.19e-66 222
MS.gene017497.t1 MTR_8g074550 29.940 501 303 15 2 471 5 488 1.27e-65 220
MS.gene017497.t1 MTR_8g009055 31.027 477 287 14 2 460 3 455 2.83e-65 218
MS.gene017497.t1 MTR_0078s0010 29.897 485 308 14 2 473 3 468 5.36e-65 217
MS.gene017497.t1 MTR_0078s0060 30.544 478 301 14 2 467 3 461 1.35e-63 213
MS.gene017497.t1 MTR_8g009050 31.211 487 287 16 2 467 3 462 1.41e-63 213
MS.gene017497.t1 MTR_5g019580 29.630 486 279 14 2 467 56 498 2.15e-63 214
MS.gene017497.t1 MTR_7g047030 30.561 481 298 16 2 467 3 462 7.85e-63 211
MS.gene017497.t1 MTR_7g047270 30.561 481 298 16 2 467 3 462 7.85e-63 211
MS.gene017497.t1 MTR_0184s0030 30.000 480 289 14 2 460 3 456 2.84e-62 210
MS.gene017497.t1 MTR_8g006260 31.224 474 291 16 3 460 4 458 2.92e-62 210
MS.gene017497.t1 MTR_6g033625 30.408 490 285 14 3 467 2 460 3.52e-62 209
MS.gene017497.t1 MTR_8g009063 30.689 479 300 14 2 467 10 469 6.82e-62 209
MS.gene017497.t1 MTR_8g009073 29.939 491 286 15 2 467 3 460 2.26e-61 207
MS.gene017497.t1 MTR_6g033725 29.857 489 302 12 3 475 2 465 6.13e-61 207
MS.gene017497.t1 MTR_6g033675 27.992 493 309 14 3 475 2 468 7.21e-61 206
MS.gene017497.t1 MTR_8g009067 29.854 479 304 12 2 468 3 461 7.63e-61 206
MS.gene017497.t1 MTR_6g033615 29.916 478 289 13 3 467 2 446 2.87e-60 204
MS.gene017497.t1 MTR_1g019510 29.735 491 286 13 2 467 3 459 1.44e-59 203
MS.gene017497.t1 MTR_8g012635 29.757 494 302 14 2 473 3 473 2.75e-59 202
MS.gene017497.t1 MTR_8g006270 29.668 482 300 15 2 468 3 460 3.44e-59 202
MS.gene017497.t1 MTR_6g033660 28.367 490 304 10 6 475 5 467 5.24e-59 201
MS.gene017497.t1 MTR_8g008970 30.208 480 299 14 2 467 3 460 7.16e-59 207
MS.gene017497.t1 MTR_8g008970 34.629 283 145 8 192 456 534 794 3.25e-37 145
MS.gene017497.t1 MTR_8g012650 30.913 482 286 16 2 460 3 460 1.77e-58 200
MS.gene017497.t1 MTR_8g008990 30.672 476 292 16 2 460 3 457 5.15e-58 199
MS.gene017497.t1 MTR_6g005600 30.208 480 300 15 3 467 4 463 2.25e-57 197
MS.gene017497.t1 MTR_8g012745 31.328 482 289 19 2 464 3 461 2.11e-55 192
MS.gene017497.t1 MTR_7g046490 30.544 478 301 14 2 468 3 460 3.72e-55 191
MS.gene017497.t1 MTR_7g102460 28.600 500 306 14 3 472 7 485 4.17e-54 189
MS.gene017497.t1 MTR_3g069710 29.735 491 280 13 2 473 9 453 7.57e-53 185
MS.gene017497.t1 MTR_8g009067 32.591 359 215 9 118 468 4 343 1.30e-51 179
MS.gene017497.t1 MTR_4g031800 27.455 499 301 17 2 471 6 472 6.28e-51 180
MS.gene017497.t1 MTR_1g062380 28.679 530 275 17 1 473 12 495 3.06e-50 179
MS.gene017497.t1 MTR_7g102490 27.745 501 311 14 3 472 7 487 4.57e-50 178
MS.gene017497.t1 MTR_8g009073 37.175 269 149 7 204 467 78 331 7.11e-50 173
MS.gene017497.t1 MTR_3g479520 29.216 510 288 16 2 474 12 485 7.78e-50 177
MS.gene017497.t1 MTR_4g024020 26.477 491 311 12 3 462 7 478 2.23e-49 176
MS.gene017497.t1 MTR_8g066610 28.862 492 300 16 4 469 8 475 4.23e-49 175
MS.gene017497.t1 MTR_4g485630 27.255 510 285 19 2 469 6 471 5.07e-49 175
MS.gene017497.t1 MTR_8g012730 34.892 278 134 8 192 459 56 296 5.67e-48 167
MS.gene017497.t1 MTR_5g072810 28.778 483 285 15 6 471 13 453 7.83e-48 171
MS.gene017497.t1 MTR_5g045970 26.419 511 310 16 1 473 12 494 1.05e-47 172
MS.gene017497.t1 MTR_1g107350 30.728 371 213 10 105 460 116 457 2.25e-47 170
MS.gene017497.t1 MTR_4g095008 30.617 405 244 13 77 468 81 461 2.79e-47 171
MS.gene017497.t1 MTR_5g072860 26.884 491 294 14 6 473 19 467 6.97e-47 169
MS.gene017497.t1 MTR_4g094920 28.632 475 292 15 15 472 36 480 1.23e-46 169
MS.gene017497.t1 MTR_8g012630 39.910 223 104 6 256 464 202 408 1.73e-46 167
MS.gene017497.t1 MTR_7g070660 27.921 505 290 17 3 469 9 477 2.33e-46 168
MS.gene017497.t1 MTR_7g102550 27.959 490 291 14 7 460 11 474 4.80e-46 167
MS.gene017497.t1 MTR_6g035185 26.052 499 312 14 2 469 8 480 6.01e-46 167
MS.gene017497.t1 MTR_7g070740 27.593 511 288 19 3 469 9 481 9.02e-46 166
MS.gene017497.t1 MTR_6g014220 26.953 512 293 15 2 472 7 478 9.36e-46 166
MS.gene017497.t1 MTR_7g102560 26.494 502 317 16 3 474 7 486 1.04e-45 166
MS.gene017497.t1 MTR_7g070610 27.054 499 307 16 3 469 11 484 1.93e-45 166
MS.gene017497.t1 MTR_7g070800 25.963 493 316 14 3 469 4 473 2.23e-45 165
MS.gene017497.t1 MTR_5g067170 27.163 497 306 16 2 469 8 477 2.50e-45 165
MS.gene017497.t1 MTR_5g072820 27.917 480 290 14 6 471 11 448 5.74e-45 163
MS.gene017497.t1 MTR_4g082820 27.235 481 322 15 4 475 6 467 5.78e-45 164
MS.gene017497.t1 MTR_7g117405 26.667 495 311 14 7 474 14 483 8.64e-45 163
MS.gene017497.t1 MTR_5g075440 26.707 498 288 14 4 473 9 457 1.12e-44 162
MS.gene017497.t1 MTR_6g038200 27.721 487 263 16 7 460 13 443 1.30e-44 162
MS.gene017497.t1 MTR_1g107360 28.646 384 224 9 105 474 117 464 1.91e-44 162
MS.gene017497.t1 MTR_6g038230 26.804 485 270 15 7 460 13 443 2.03e-44 162
MS.gene017497.t1 MTR_5g035580 27.455 499 278 16 4 473 12 455 2.10e-44 162
MS.gene017497.t1 MTR_1g032490 27.027 444 276 10 4 427 9 424 2.52e-44 162
MS.gene017497.t1 MTR_4g094220 28.458 506 281 19 6 468 8 475 2.68e-44 162
MS.gene017497.t1 MTR_3g069690 27.105 487 304 12 2 475 5 453 2.86e-44 161
MS.gene017497.t1 MTR_7g012120 27.755 490 311 17 2 469 13 481 2.92e-44 162
MS.gene017497.t1 MTR_1g019520 39.286 224 119 3 258 475 4 216 2.96e-44 155
MS.gene017497.t1 MTR_7g055710 26.200 500 309 16 3 469 9 481 3.12e-44 162
MS.gene017497.t1 MTR_1g107285 29.146 398 221 12 99 475 110 467 3.15e-44 162
MS.gene017497.t1 MTR_5g072830 27.178 482 291 14 6 471 11 448 1.01e-43 160
MS.gene017497.t1 MTR_7g070860 25.506 494 305 14 2 469 4 460 1.09e-43 160
MS.gene017497.t1 MTR_4g118000 27.105 487 293 18 8 469 15 464 1.22e-43 160
MS.gene017497.t1 MTR_6g078320 26.625 477 306 14 6 459 12 467 1.58e-43 160
MS.gene017497.t1 MTR_5g464760 28.405 514 283 21 3 475 10 479 2.01e-43 160
MS.gene017497.t1 MTR_7g102450 27.218 496 299 16 7 474 13 474 2.14e-43 159
MS.gene017497.t1 MTR_7g071040 27.038 503 302 18 3 469 15 488 2.22e-43 160
MS.gene017497.t1 MTR_3g479490 27.451 510 297 18 2 474 3 476 3.34e-43 159
MS.gene017497.t1 MTR_3g008010 26.772 508 297 17 3 472 8 478 4.05e-43 159
MS.gene017497.t1 MTR_6g014290 26.367 512 296 16 2 472 7 478 5.01e-43 159
MS.gene017497.t1 MTR_2g035020 28.398 493 307 18 2 469 8 479 5.35e-43 159
MS.gene017497.t1 MTR_8g059425 28.291 509 290 18 2 472 7 478 7.93e-43 158
MS.gene017497.t1 MTR_7g070780 26.707 498 307 16 4 469 10 481 1.02e-42 158
MS.gene017497.t1 MTR_1g107315 29.897 388 220 14 105 473 116 470 1.05e-42 158
MS.gene017497.t1 MTR_3g049970 25.859 495 311 14 4 473 8 471 1.48e-42 157
MS.gene017497.t1 MTR_0536s0020 26.572 493 307 15 2 469 15 477 1.55e-42 157
MS.gene017497.t1 MTR_6g038220 27.101 476 279 17 7 460 13 442 1.81e-42 157
MS.gene017497.t1 MTR_1g107365 29.592 392 210 13 105 474 147 494 3.00e-42 157
MS.gene017497.t1 MTR_3g079480 28.125 512 291 17 2 474 18 491 3.01e-42 157
MS.gene017497.t1 MTR_5g072840 26.884 491 285 14 6 473 11 450 3.08e-42 156
MS.gene017497.t1 MTR_7g070940 27.327 505 290 16 2 469 6 470 3.95e-42 156
MS.gene017497.t1 MTR_0891s0010 35.336 283 149 8 201 474 35 292 4.00e-42 152
MS.gene017497.t1 MTR_5g035560 27.054 499 280 15 4 473 10 453 4.28e-42 156
MS.gene017497.t1 MTR_5g029800 28.370 497 302 21 2 471 8 477 8.93e-42 155
MS.gene017497.t1 MTR_6g014250 25.781 512 299 15 2 472 7 478 1.21e-41 155
MS.gene017497.t1 MTR_5g016660 26.600 500 308 15 3 469 8 481 1.50e-41 155
MS.gene017497.t1 MTR_3g479610 34.507 284 150 8 201 474 58 315 1.77e-41 150
MS.gene017497.t1 MTR_4g064987 28.692 474 295 15 5 472 8 444 1.77e-41 154
MS.gene017497.t1 MTR_0536s0010 27.016 496 295 20 2 469 18 474 1.83e-41 154
MS.gene017497.t1 MTR_4g117980 26.358 497 312 18 2 469 8 479 2.07e-41 154
MS.gene017497.t1 MTR_5g464810 28.736 522 261 19 6 472 13 478 2.42e-41 154
MS.gene017497.t1 MTR_5g064240 28.736 522 261 19 6 472 13 478 2.42e-41 154
MS.gene017497.t1 MTR_3g479470 29.333 450 248 14 2 411 10 429 3.11e-41 154
MS.gene017497.t1 MTR_6g035265 25.948 501 309 19 1 469 1 471 3.63e-41 154
MS.gene017497.t1 MTR_1g040310 27.255 499 299 16 4 469 14 481 3.83e-41 154
MS.gene017497.t1 MTR_8g064880 31.686 344 185 11 105 429 119 431 4.27e-41 153
MS.gene017497.t1 MTR_7g080935 29.083 447 258 15 3 428 9 417 4.78e-41 153
MS.gene017497.t1 MTR_2g034990 26.358 497 312 17 2 469 8 479 4.81e-41 153
MS.gene017497.t1 MTR_0288s0020 25.838 507 288 13 2 472 7 461 4.97e-41 153
MS.gene017497.t1 MTR_8g064870 29.504 383 228 13 105 471 117 473 5.01e-41 153
MS.gene017497.t1 MTR_0036s0220 28.601 479 272 16 6 452 13 453 5.33e-41 153
MS.gene017497.t1 MTR_2g098430 27.835 485 286 19 2 448 3 461 1.37e-40 152
MS.gene017497.t1 MTR_4g485620 28.836 378 226 12 109 469 101 452 2.56e-40 151
MS.gene017497.t1 MTR_4g117960 26.061 495 315 18 2 469 8 478 3.03e-40 151
MS.gene017497.t1 MTR_4g117890 24.395 496 318 13 2 471 10 474 3.21e-40 151
MS.gene017497.t1 MTR_1g107380 28.061 392 223 12 102 472 120 473 3.60e-40 150
MS.gene017497.t1 MTR_4g064987 28.423 482 292 16 5 472 8 450 3.88e-40 150
MS.gene017497.t1 MTR_7g070810 27.273 506 292 16 2 469 6 473 4.78e-40 150
MS.gene017497.t1 MTR_7g070910 26.096 502 308 15 3 469 9 482 5.53e-40 150
MS.gene017497.t1 MTR_1g107375 30.263 380 196 15 119 474 122 456 5.59e-40 150
MS.gene017497.t1 MTR_4g108250 33.808 281 162 6 201 469 217 485 6.07e-40 150
MS.gene017497.t1 MTR_2g035040 27.525 396 245 15 97 469 8 384 7.84e-40 148
MS.gene017497.t1 MTR_5g039900 29.867 375 229 10 109 468 125 480 8.58e-40 150
MS.gene017497.t1 MTR_7g080940 28.097 452 256 16 3 428 9 417 1.13e-39 149
MS.gene017497.t1 MTR_7g011470 27.704 379 225 9 105 472 122 462 1.19e-39 149
MS.gene017497.t1 MTR_8g044140 30.607 379 225 10 109 469 88 446 1.41e-39 149
MS.gene017497.t1 MTR_6g014020 26.848 514 293 17 2 472 7 480 2.66e-39 148
MS.gene017497.t1 MTR_7g080900 27.273 429 252 15 2 409 9 398 4.41e-39 147
MS.gene017497.t1 MTR_4g008630 34.298 242 143 7 233 471 234 462 4.91e-39 147
MS.gene017497.t1 MTR_8g071070 25.670 448 279 14 36 471 63 468 4.97e-39 147
MS.gene017497.t1 MTR_7g011470 27.487 382 226 11 105 472 122 466 4.98e-39 147
MS.gene017497.t1 MTR_5g016480 25.681 514 294 19 2 473 5 472 5.02e-39 147
MS.gene017497.t1 MTR_5g045960 25.919 517 305 19 2 474 6 488 5.19e-39 148
MS.gene017497.t1 MTR_6g014187 25.977 512 300 16 2 472 7 480 8.57e-39 147
MS.gene017497.t1 MTR_7g070930 25.253 495 321 14 3 469 12 485 1.27e-38 147
MS.gene017497.t1 MTR_4g485640 25.263 475 308 14 13 468 217 663 1.45e-38 149
MS.gene017497.t1 MTR_6g038240 25.826 484 300 14 7 472 13 455 1.72e-38 145
MS.gene017497.t1 MTR_6g013440 26.408 515 294 15 2 472 8 481 1.77e-38 146
MS.gene017497.t1 MTR_6g014170 25.787 508 288 17 2 472 7 462 2.16e-38 145
MS.gene017497.t1 MTR_7g102520 27.022 507 300 17 7 473 14 490 3.23e-38 146
MS.gene017497.t1 MTR_3g031450 27.016 496 273 17 5 472 18 452 3.53e-38 145
MS.gene017497.t1 MTR_3g031400 25.407 492 284 17 5 472 18 450 3.74e-38 145
MS.gene017497.t1 MTR_6g014050 25.346 434 263 11 71 472 77 481 7.73e-38 144
MS.gene017497.t1 MTR_6g014300 25.992 504 294 16 2 472 9 466 8.03e-38 144
MS.gene017497.t1 MTR_5g040030 26.400 500 309 17 2 468 11 484 1.02e-37 144
MS.gene017497.t1 MTR_6g014040 25.926 513 300 15 2 472 7 481 1.49e-37 144
MS.gene017497.t1 MTR_6g035295 27.895 380 233 9 109 469 125 482 1.71e-37 144
MS.gene017497.t1 MTR_4g117950 27.846 492 297 20 2 469 3 460 2.07e-37 143
MS.gene017497.t1 MTR_7g013240 23.789 475 303 13 9 470 10 438 2.47e-37 142
MS.gene017497.t1 MTR_5g031860 27.237 503 283 18 6 471 13 469 4.28e-37 142
MS.gene017497.t1 MTR_0009s0240 28.090 445 259 20 36 468 60 455 5.00e-37 142
MS.gene017497.t1 MTR_6g014310 26.250 400 238 10 97 472 115 481 5.10e-37 142
MS.gene017497.t1 MTR_6g013960 25.437 515 299 17 2 472 7 480 5.13e-37 142
MS.gene017497.t1 MTR_1g029540 35.023 217 127 6 258 471 254 459 5.52e-37 142
MS.gene017497.t1 MTR_4g485590 28.297 417 240 13 6 406 10 383 6.09e-37 140
MS.gene017497.t1 MTR_6g011340 28.678 401 227 14 97 472 114 480 6.39e-37 142
MS.gene017497.t1 MTR_6g014270 25.097 514 302 16 3 472 5 479 6.67e-37 142
MS.gene017497.t1 MTR_5g058320 26.139 505 291 17 3 472 8 465 7.98e-37 141
MS.gene017497.t1 MTR_8g466240 28.157 483 278 18 10 468 13 450 1.37e-36 140
MS.gene017497.t1 MTR_8g090095 32.787 244 147 6 233 471 248 479 1.40e-36 141
MS.gene017497.t1 MTR_5g031830 26.096 502 291 16 6 471 13 470 1.74e-36 140
MS.gene017497.t1 MTR_6g013900 25.882 510 300 16 3 472 8 479 3.71e-36 140
MS.gene017497.t1 MTR_2g008210 25.000 504 311 15 2 472 8 477 9.33e-36 139
MS.gene017497.t1 MTR_7g080950 24.236 491 307 15 3 473 4 449 1.86e-35 137
MS.gene017497.t1 MTR_4g082810 29.584 409 245 16 4 391 6 392 2.45e-35 136
MS.gene017497.t1 MTR_7g013200 22.881 472 316 14 9 472 9 440 2.73e-35 136
MS.gene017497.t1 MTR_6g013920 27.204 397 238 15 97 472 113 479 3.92e-35 137
MS.gene017497.t1 MTR_6g014200 25.686 510 302 16 3 472 5 477 3.92e-35 137
MS.gene017497.t1 MTR_6g013990 26.866 402 231 14 97 472 114 478 7.65e-35 136
MS.gene017497.t1 MTR_7g470610 32.000 300 169 10 112 406 2 271 8.89e-35 132
MS.gene017497.t1 MTR_7g070583 32.000 300 169 10 112 406 2 271 8.89e-35 132
MS.gene017497.t1 MTR_7g013260 23.567 471 310 14 9 470 10 439 1.10e-34 135
MS.gene017497.t1 MTR_3g009490 36.649 191 109 5 284 469 3 186 1.17e-34 128
MS.gene017497.t1 MTR_6g014150 26.382 398 240 12 97 472 111 477 1.37e-34 135
MS.gene017497.t1 MTR_7g013220 23.480 477 314 13 9 470 9 449 1.41e-34 135
MS.gene017497.t1 MTR_8g083290 24.498 498 307 12 6 472 5 464 1.65e-34 135
MS.gene017497.t1 MTR_5g087620 25.720 521 299 20 2 471 7 490 1.66e-34 135
MS.gene017497.t1 MTR_5g031840 25.150 501 305 17 1 471 1 461 2.02e-34 134
MS.gene017497.t1 MTR_7g070870 29.448 326 174 8 158 469 173 456 2.54e-34 134
MS.gene017497.t1 MTR_6g013450 31.560 282 154 9 201 472 229 481 2.64e-34 134
MS.gene017497.t1 MTR_7g039550 31.343 268 165 7 209 468 2 258 1.59e-33 128
MS.gene017497.t1 MTR_6g038300 25.581 473 296 15 6 461 12 445 3.94e-33 130
MS.gene017497.t1 MTR_6g014240 26.994 489 286 19 2 468 4 443 3.95e-33 130
MS.gene017497.t1 MTR_4g128690 26.515 396 245 12 83 471 96 452 7.22e-33 130
MS.gene017497.t1 MTR_8g009840 37.056 197 112 3 275 467 333 521 1.05e-32 130
MS.gene017497.t1 MTR_8g032950 29.329 283 182 8 198 469 203 478 1.55e-32 129
MS.gene017497.t1 MTR_5g027210 33.929 224 131 6 253 471 270 481 7.17e-32 127
MS.gene017497.t1 MTR_8g007585 33.790 219 123 4 254 472 196 392 1.11e-31 125
MS.gene017497.t1 MTR_6g014190 30.070 286 162 9 196 472 31 287 1.33e-31 123
MS.gene017497.t1 MTR_0477s0010 27.177 379 186 9 118 472 5 317 2.69e-31 123
MS.gene017497.t1 MTR_8g068330 27.883 477 274 20 2 448 5 441 4.05e-31 125
MS.gene017497.t1 MTR_7g013180 22.175 469 307 14 9 460 9 436 5.58e-31 124
MS.gene017497.t1 MTR_2g059240 28.533 375 229 12 109 472 123 469 8.46e-31 124
MS.gene017497.t1 MTR_5g004940 33.621 232 135 6 239 467 179 394 1.09e-30 123
MS.gene017497.t1 MTR_8g043470 32.719 217 112 4 258 468 186 374 3.87e-30 121
MS.gene017497.t1 MTR_8g083280 29.927 274 160 5 205 475 221 465 4.22e-30 122
MS.gene017497.t1 MTR_3g084530 32.014 278 162 10 205 471 211 472 9.49e-30 121
MS.gene017497.t1 MTR_2086s0010 36.269 193 100 6 282 473 3 173 1.35e-29 114
MS.gene017497.t1 MTR_1996s0010 36.269 193 100 6 282 473 3 173 1.35e-29 114
MS.gene017497.t1 MTR_3g084520 32.014 278 162 9 205 471 211 472 2.50e-29 120
MS.gene017497.t1 MTR_7g070760 33.175 211 102 3 200 406 28 203 4.23e-29 114
MS.gene017497.t1 MTR_5g072850 31.673 281 139 8 199 475 154 385 4.58e-29 118
MS.gene017497.t1 MTR_8g088560 23.747 459 277 12 4 436 9 420 2.09e-28 117
MS.gene017497.t1 MTR_8g007565 26.987 478 269 21 4 445 6 439 2.55e-28 117
MS.gene017497.t1 MTR_8g007650 26.987 478 269 21 4 445 6 439 4.57e-28 116
MS.gene017497.t1 MTR_3g084540 31.183 279 164 11 205 471 211 473 5.38e-28 116
MS.gene017497.t1 MTR_8g068360 24.681 470 297 16 2 448 9 444 5.70e-28 116
MS.gene017497.t1 MTR_8g068340 24.731 465 304 17 2 448 9 445 6.96e-28 116
MS.gene017497.t1 MTR_5g098960 25.319 470 282 18 1 449 3 424 1.85e-27 114
MS.gene017497.t1 MTR_5g066410 28.997 369 204 14 91 445 91 415 6.36e-27 113
MS.gene017497.t1 MTR_0078s0200 26.625 323 201 9 2 306 3 307 2.58e-26 108
MS.gene017497.t1 MTR_4g128720 25.622 402 241 14 83 471 99 455 4.71e-26 110
MS.gene017497.t1 MTR_7g071050 31.579 209 116 6 257 454 230 422 5.12e-26 110
MS.gene017497.t1 MTR_7g070995 39.850 133 70 2 344 469 13 142 7.69e-25 100
MS.gene017497.t1 MTR_4g123553 26.572 493 269 22 1 462 11 441 1.50e-24 106
MS.gene017497.t1 MTR_2g046620 29.699 266 155 11 189 448 200 439 4.60e-24 105
MS.gene017497.t1 MTR_8g056740 28.146 302 160 9 107 405 55 302 1.14e-23 103
MS.gene017497.t1 MTR_2g008226 24.158 505 304 19 2 475 7 463 4.43e-23 102
MS.gene017497.t1 MTR_7g067120 24.644 491 286 22 2 475 6 429 5.25e-23 101
MS.gene017497.t1 MTR_5g066390 34.667 150 84 2 325 472 78 215 5.86e-23 97.4
MS.gene017497.t1 MTR_6g042310 25.934 482 269 24 1 448 14 441 9.44e-23 101
MS.gene017497.t1 MTR_6g014160 31.604 212 89 8 201 404 210 373 2.42e-22 99.0
MS.gene017497.t1 MTR_8g006230 28.302 212 142 5 97 306 44 247 8.98e-22 95.5
MS.gene017497.t1 MTR_4g079250 29.864 221 131 5 236 455 241 438 4.24e-21 96.3
MS.gene017497.t1 MTR_6g014185 27.402 281 137 8 201 472 123 345 4.71e-21 94.7
MS.gene017497.t1 MTR_7g067330 22.177 487 303 16 2 475 6 429 5.82e-21 95.5
MS.gene017497.t1 MTR_0536s0030 35.099 151 89 7 327 469 200 349 7.67e-21 94.4
MS.gene017497.t1 MTR_2g008225 35.196 179 94 6 231 404 243 404 9.43e-21 95.1
MS.gene017497.t1 MTR_6g036650 37.584 149 77 4 257 404 276 409 2.92e-20 93.6
MS.gene017497.t1 MTR_6g014000 32.026 153 86 3 323 473 21 157 3.10e-20 93.6
MS.gene017497.t1 MTR_2g008220 34.286 175 92 4 257 430 270 422 5.23e-20 92.8
MS.gene017497.t1 MTR_1g107325 33.571 140 85 2 334 471 219 352 1.17e-19 90.9
MS.gene017497.t1 MTR_4g079270 28.319 226 138 5 231 455 236 438 1.17e-19 91.7
MS.gene017497.t1 MTR_4g077960 31.282 195 109 7 257 448 243 415 1.52e-19 91.3
MS.gene017497.t1 MTR_3g435310 32.584 178 97 5 257 433 225 380 1.55e-19 90.9
MS.gene017497.t1 MTR_2g014900 29.208 202 124 3 258 458 256 439 2.15e-18 87.8
MS.gene017497.t1 MTR_4g059370 30.000 200 123 4 259 456 189 373 6.21e-18 85.9
MS.gene017497.t1 MTR_5g090680 88.095 42 5 0 1 42 1 42 1.76e-17 78.6
MS.gene017497.t1 MTR_7g080960 31.613 155 61 1 255 409 322 431 3.80e-17 84.3
MS.gene017497.t1 MTR_3g009500 28.295 258 160 13 1 239 1 252 8.37e-17 80.9
MS.gene017497.t1 MTR_1g090270 28.155 206 129 6 254 456 257 446 2.31e-16 81.6
MS.gene017497.t1 MTR_2g083480 28.870 239 144 6 231 467 236 450 2.87e-16 81.3
MS.gene017497.t1 MTR_6g052375 33.333 162 83 5 192 349 54 194 3.25e-16 79.7
MS.gene017497.t1 MTR_2g083430 22.042 431 270 11 63 471 68 454 3.56e-16 80.9
MS.gene017497.t1 MTR_3g009520 26.236 263 161 11 6 245 7 259 4.35e-15 75.5
MS.gene017497.t1 MTR_6g014186 21.359 515 282 19 2 472 4 439 8.10e-14 73.6
MS.gene017497.t1 MTR_0475s0030 46.552 58 31 0 354 411 11 68 4.70e-13 65.5
MS.gene017497.t1 MTR_2g083490 22.699 489 324 16 4 475 7 458 2.15e-12 69.3
MS.gene017497.t1 MTR_5g090590 53.704 54 25 0 400 453 1 54 5.08e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017497.t1 AT3G21760 44.848 495 239 11 3 475 2 484 2.59e-140 412
MS.gene017497.t1 AT3G21780 41.719 477 268 6 3 475 2 472 1.81e-131 389
MS.gene017497.t1 AT3G21750 39.463 484 269 7 3 475 2 472 2.41e-129 384
MS.gene017497.t1 AT4G15280 42.387 486 257 9 3 475 2 477 5.32e-127 377
MS.gene017497.t1 AT4G15280 42.387 486 257 9 3 475 34 509 1.28e-126 378
MS.gene017497.t1 AT3G21790 41.884 499 246 12 3 475 2 482 1.56e-124 372
MS.gene017497.t1 AT3G21800 40.650 492 262 11 1 475 1 479 7.95e-116 349
MS.gene017497.t1 AT1G07250 40.741 486 252 12 1 468 2 469 7.71e-115 347
MS.gene017497.t1 AT2G29730 38.716 483 257 11 1 468 1 459 9.75e-113 341
MS.gene017497.t1 AT4G15260 45.333 375 177 9 112 475 1 358 1.22e-110 332
MS.gene017497.t1 AT1G07240 37.778 495 268 11 1 473 1 477 5.47e-106 324
MS.gene017497.t1 AT1G07260 37.755 490 266 10 3 473 4 473 1.87e-101 312
MS.gene017497.t1 AT2G29710 37.344 482 265 11 1 468 1 459 1.47e-100 309
MS.gene017497.t1 AT2G29740 36.475 488 270 11 2 469 5 472 1.57e-99 307
MS.gene017497.t1 AT2G29750 37.271 491 265 14 2 469 5 475 2.72e-93 291
MS.gene017497.t1 AT4G01070 34.454 476 279 14 2 464 5 460 1.08e-81 261
MS.gene017497.t1 AT3G16520 35.052 485 271 15 1 469 1 457 1.29e-79 255
MS.gene017497.t1 AT3G16520 34.746 472 264 15 1 456 1 444 1.44e-75 244
MS.gene017497.t1 AT3G16520 34.746 472 264 15 1 456 1 444 1.71e-75 244
MS.gene017497.t1 AT1G01390 31.568 472 298 10 6 468 9 464 3.56e-71 234
MS.gene017497.t1 AT1G01390 31.568 472 298 10 6 468 26 481 4.58e-71 234
MS.gene017497.t1 AT1G01420 31.702 470 291 12 6 464 9 459 5.35e-71 233
MS.gene017497.t1 AT1G01420 31.702 470 291 12 6 464 12 462 6.27e-71 233
MS.gene017497.t1 AT4G36770 33.405 464 268 15 8 454 7 446 1.38e-65 218
MS.gene017497.t1 AT2G18570 30.544 478 299 13 1 464 1 459 4.31e-64 215
MS.gene017497.t1 AT5G26310 32.305 486 270 21 1 460 3 455 3.05e-62 210
MS.gene017497.t1 AT5G66690 30.849 483 277 21 1 458 3 453 2.24e-61 208
MS.gene017497.t1 AT3G50740 29.268 492 302 16 1 469 3 471 2.33e-61 208
MS.gene017497.t1 AT2G18560 32.292 384 231 11 91 464 5 369 3.10e-59 199
MS.gene017497.t1 AT2G36760 27.510 498 311 13 7 475 16 492 3.66e-53 186
MS.gene017497.t1 AT2G36750 27.968 497 305 13 7 473 12 485 1.14e-50 179
MS.gene017497.t1 AT2G15480 28.376 511 294 14 2 469 7 488 3.81e-50 178
MS.gene017497.t1 AT1G22340 28.544 515 280 18 2 471 10 481 5.87e-50 177
MS.gene017497.t1 AT2G15480 28.743 501 295 14 2 469 7 478 8.37e-50 177
MS.gene017497.t1 AT2G15490 28.543 501 299 17 2 469 4 478 2.15e-48 173
MS.gene017497.t1 AT2G36770 26.946 501 310 17 7 475 16 492 3.46e-48 173
MS.gene017497.t1 AT4G01070 32.861 353 218 11 2 346 5 346 6.54e-48 169
MS.gene017497.t1 AT2G15490 28.543 501 296 18 2 469 4 475 1.37e-47 171
MS.gene017497.t1 AT4G34131 29.541 501 290 19 2 469 7 477 8.27e-47 169
MS.gene017497.t1 AT3G46660 27.743 483 290 18 6 471 15 455 1.51e-46 168
MS.gene017497.t1 AT5G59590 26.708 483 299 15 1 469 6 447 1.78e-46 167
MS.gene017497.t1 AT1G22380 28.046 517 283 19 2 475 10 480 2.19e-46 168
MS.gene017497.t1 AT2G36800 27.054 499 307 14 7 472 14 488 2.38e-46 168
MS.gene017497.t1 AT1G22400 28.343 501 291 17 2 470 10 474 2.79e-46 167
MS.gene017497.t1 AT3G53160 27.800 500 305 16 7 474 10 485 3.59e-46 167
MS.gene017497.t1 AT5G12890 27.866 506 300 18 2 472 7 482 4.80e-46 167
MS.gene017497.t1 AT3G46670 27.699 491 278 21 6 471 10 448 9.62e-46 165
MS.gene017497.t1 AT3G46690 26.543 486 301 15 1 471 5 449 1.93e-45 164
MS.gene017497.t1 AT4G34135 28.200 500 299 17 2 469 8 479 8.34e-45 164
MS.gene017497.t1 AT5G59580 27.216 485 289 19 3 469 7 445 1.04e-44 162
MS.gene017497.t1 AT2G36780 26.157 497 315 15 7 473 16 490 1.14e-44 163
MS.gene017497.t1 AT2G36790 27.381 504 300 16 7 473 15 489 1.12e-43 160
MS.gene017497.t1 AT3G11340 27.801 482 290 17 6 473 9 446 1.20e-43 159
MS.gene017497.t1 AT3G55710 27.835 485 304 13 2 473 5 456 3.18e-43 159
MS.gene017497.t1 AT4G34138 28.689 488 289 19 3 460 9 467 3.33e-43 159
MS.gene017497.t1 AT1G22360 27.593 482 283 15 2 452 7 453 9.10e-43 158
MS.gene017497.t1 AT1G78270 27.344 512 291 18 2 472 10 481 1.05e-42 158
MS.gene017497.t1 AT2G30150 27.984 486 291 13 6 475 14 456 7.01e-42 155
MS.gene017497.t1 AT1G22360 27.766 479 279 15 2 449 7 449 8.86e-42 155
MS.gene017497.t1 AT2G30150 27.743 483 290 13 9 475 1 440 3.14e-41 153
MS.gene017497.t1 AT3G55700 27.178 482 307 13 2 473 5 452 1.04e-40 152
MS.gene017497.t1 AT3G46650 26.016 492 276 16 3 472 8 433 1.48e-40 151
MS.gene017497.t1 AT3G21560 25.749 501 296 17 6 471 13 472 1.98e-40 152
MS.gene017497.t1 AT5G03490 28.025 471 266 15 2 444 16 441 2.34e-40 151
MS.gene017497.t1 AT1G22370 28.859 447 241 14 2 407 10 420 2.85e-40 151
MS.gene017497.t1 AT5G05870 27.926 487 291 16 5 471 8 454 3.96e-40 150
MS.gene017497.t1 AT5G14860 28.402 507 282 22 6 471 9 475 4.04e-40 151
MS.gene017497.t1 AT3G46700 24.897 486 304 12 1 471 5 444 5.80e-40 149
MS.gene017497.t1 AT5G38010 25.971 489 301 17 2 471 7 453 1.11e-39 149
MS.gene017497.t1 AT1G51210 26.201 458 281 14 3 446 18 432 2.38e-39 147
MS.gene017497.t1 AT4G15480 29.235 366 224 12 105 460 127 467 1.57e-38 146
MS.gene017497.t1 AT2G31790 28.916 498 258 24 2 460 5 445 1.66e-38 145
MS.gene017497.t1 AT5G05880 26.380 489 292 17 4 471 7 448 3.87e-38 145
MS.gene017497.t1 AT1G73880 28.195 493 296 18 3 473 12 468 4.04e-38 145
MS.gene017497.t1 AT2G16890 27.621 496 285 18 6 468 10 464 6.62e-38 144
MS.gene017497.t1 AT2G30140 25.306 490 293 13 6 473 14 452 1.36e-37 143
MS.gene017497.t1 AT2G30140 24.694 490 297 14 6 473 14 453 2.15e-37 142
MS.gene017497.t1 AT3G46680 25.000 392 247 10 91 471 94 449 1.27e-36 140
MS.gene017497.t1 AT2G43840 28.423 482 264 21 6 460 8 435 1.40e-36 140
MS.gene017497.t1 AT2G43840 28.216 482 265 20 6 460 8 435 1.41e-36 140
MS.gene017497.t1 AT4G15270 34.928 209 126 4 3 201 2 210 1.68e-36 135
MS.gene017497.t1 AT4G15270 33.784 222 137 4 3 214 2 223 2.33e-36 136
MS.gene017497.t1 AT4G15270 35.556 90 58 0 386 475 213 302 4.89e-11 64.3
MS.gene017497.t1 AT3G46720 24.846 487 297 16 2 471 6 440 4.23e-36 139
MS.gene017497.t1 AT2G43820 26.707 498 286 20 2 473 4 448 5.32e-36 139
MS.gene017497.t1 AT5G38040 24.681 470 295 13 15 468 20 446 4.16e-35 136
MS.gene017497.t1 AT2G36970 28.114 281 172 6 197 475 222 474 4.25e-35 137
MS.gene017497.t1 AT5G05900 27.126 494 281 20 4 471 7 447 2.27e-34 134
MS.gene017497.t1 AT4G15490 27.586 406 230 14 95 473 100 468 2.44e-34 134
MS.gene017497.t1 AT5G17030 30.961 281 159 6 196 473 209 457 3.47e-34 134
MS.gene017497.t1 AT4G15500 27.543 403 233 14 95 473 97 464 4.30e-34 134
MS.gene017497.t1 AT4G15550 26.380 489 308 14 7 472 15 474 1.12e-33 132
MS.gene017497.t1 AT2G16890 28.009 432 245 15 6 407 10 405 1.38e-33 131
MS.gene017497.t1 AT2G23260 33.103 290 152 11 195 471 193 453 2.25e-33 131
MS.gene017497.t1 AT1G22370 35.526 228 116 6 192 407 42 250 7.39e-33 127
MS.gene017497.t1 AT4G15270 35.385 195 116 4 3 187 2 196 1.09e-32 124
MS.gene017497.t1 AT5G05860 30.909 275 160 9 201 472 201 448 1.10e-32 129
MS.gene017497.t1 AT2G31750 24.124 485 294 15 3 460 6 443 1.13e-32 129
MS.gene017497.t1 AT3G02100 24.800 500 306 17 1 475 9 463 1.45e-32 129
MS.gene017497.t1 AT2G31750 23.600 500 308 15 3 475 6 458 1.58e-32 129
MS.gene017497.t1 AT5G05890 32.609 276 154 9 200 471 205 452 1.89e-32 129
MS.gene017497.t1 AT2G28080 27.073 410 242 12 85 475 104 475 5.16e-32 128
MS.gene017497.t1 AT2G23250 32.292 288 162 9 190 471 175 435 5.70e-32 127
MS.gene017497.t1 AT1G24100 25.486 514 274 19 3 471 9 458 7.04e-32 127
MS.gene017497.t1 AT5G17050 26.551 403 245 13 83 473 95 458 2.14e-31 126
MS.gene017497.t1 AT3G53150 23.485 528 317 15 2 475 19 513 2.35e-31 127
MS.gene017497.t1 AT1G05680 24.587 484 287 16 6 460 7 441 2.58e-31 125
MS.gene017497.t1 AT1G05675 23.203 487 290 15 6 460 7 441 2.87e-31 125
MS.gene017497.t1 AT2G26480 26.230 488 305 17 1 475 4 449 3.12e-31 125
MS.gene017497.t1 AT1G05560 25.902 471 307 12 12 471 12 451 8.42e-31 124
MS.gene017497.t1 AT1G10400 23.735 514 301 18 1 474 3 465 1.29e-30 124
MS.gene017497.t1 AT1G05560 25.902 471 307 13 12 471 62 501 1.74e-30 124
MS.gene017497.t1 AT1G06000 27.813 471 289 14 2 468 7 430 1.76e-30 123
MS.gene017497.t1 AT5G49690 25.364 481 266 20 4 448 9 432 1.94e-29 120
MS.gene017497.t1 AT4G14090 26.521 411 253 14 69 469 82 453 5.63e-29 119
MS.gene017497.t1 AT5G37950 27.879 330 210 10 56 378 28 336 2.42e-28 115
MS.gene017497.t1 AT5G17040 24.543 383 244 7 97 473 98 441 3.74e-28 116
MS.gene017497.t1 AT5G17040 27.857 280 169 5 196 473 91 339 6.96e-28 114
MS.gene017497.t1 AT5G37950 28.060 335 209 12 56 378 28 342 1.03e-27 114
MS.gene017497.t1 AT5G65550 24.784 464 285 17 3 441 7 431 2.35e-26 111
MS.gene017497.t1 AT1G30530 25.112 446 286 14 40 473 43 452 4.08e-26 110
MS.gene017497.t1 AT1G05530 23.567 471 321 11 1 460 1 443 1.93e-25 108
MS.gene017497.t1 AT3G22250 23.061 477 295 13 2 452 5 435 1.69e-24 106
MS.gene017497.t1 AT4G27560 27.228 404 246 12 63 458 67 430 1.82e-23 103
MS.gene017497.t1 AT5G54010 25.417 480 281 19 3 458 4 430 3.19e-23 102
MS.gene017497.t1 AT4G27570 27.273 407 242 14 63 458 67 430 3.92e-23 102
MS.gene017497.t1 AT3G29630 23.819 487 311 17 3 475 4 444 9.50e-22 97.8
MS.gene017497.t1 AT1G64910 23.918 485 298 17 9 475 10 441 5.88e-21 95.5
MS.gene017497.t1 AT2G22590 25.726 482 273 19 3 447 13 446 3.80e-20 93.2
MS.gene017497.t1 AT1G50580 24.893 466 296 15 3 458 4 425 3.32e-19 90.5
MS.gene017497.t1 AT3G29630 22.567 483 296 13 3 475 4 418 5.71e-19 89.4
MS.gene017497.t1 AT5G53990 27.239 268 165 9 198 462 190 430 7.37e-18 86.3
MS.gene017497.t1 AT5G54060 30.085 236 136 8 229 460 241 451 1.03e-16 82.8
MS.gene017497.t1 AT1G64920 27.948 229 137 6 254 475 238 445 5.12e-16 80.5
MS.gene017497.t1 AT2G22930 27.500 200 125 4 260 458 244 424 6.70e-15 77.0
MS.gene017497.t1 AT4G09500 27.604 192 119 4 268 458 227 399 1.63e-14 75.9
MS.gene017497.t1 AT4G09500 27.604 192 119 4 268 458 252 424 1.72e-14 75.9

Find 127 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTGGTCCCACCGGATAAA+TGG 0.163488 5.2:+83335684 None:intergenic
CTTTCGATGAGGATCAAATT+AGG 0.228985 5.2:-83335540 MS.gene017497:CDS
CGATTACTCTCTTTCTGATT+TGG 0.270654 5.2:-83335428 MS.gene017497:CDS
TGGAGATTGCAGTTGATTAT+AGG 0.313789 5.2:-83335171 MS.gene017497:CDS
ACAAGATCGAGAAAGGAATA+AGG 0.331329 5.2:-83335108 MS.gene017497:CDS
CAGTGTTGCTTTCCTTGGTT+TGG 0.335305 5.2:-83335974 MS.gene017497:CDS
GCTGTTTCAGCAGGACTGTT+TGG 0.342607 5.2:+83336246 None:intergenic
ACTTCCAGTGTTGCTTTCCT+TGG 0.360737 5.2:-83335979 MS.gene017497:CDS
CTCTCTTTCTGATTTGGTTG+TGG 0.368187 5.2:-83335422 MS.gene017497:CDS
TTTCGATGAGGATCAAATTA+GGG 0.376447 5.2:-83335539 MS.gene017497:CDS
GCTGATTCAGCAGGATGAAT+TGG 0.380466 5.2:-83335902 MS.gene017497:CDS
CAAATCAGAAAGAGAGTAAT+CGG 0.389600 5.2:+83335429 None:intergenic
CACCCATGGTTCCCTTCGGT+GGG 0.397924 5.2:+83335458 None:intergenic
GAAACAAAGCCTCCTGTTGC+CGG 0.397958 5.2:+83335316 None:intergenic
ACTCTCGAGAGCATATATTA+TGG 0.401862 5.2:-83335274 MS.gene017497:CDS
AATACCATTGAGCTTGGGTT+TGG 0.407869 5.2:+83335648 None:intergenic
TTTCTGAGTCAGAGGACAAA+AGG 0.410693 5.2:+83336217 None:intergenic
GGATCTTCCTACACTTGCTT+AGG 0.414433 5.2:-83335004 MS.gene017497:CDS
GCTAGGACTGGAAGGGTCAT+TGG 0.416854 5.2:-83335370 MS.gene017497:CDS
GGAAACGTGTTTGTAGGAAC+CGG 0.419107 5.2:+83335859 None:intergenic
CTGATGACATTATTATTAAG+TGG 0.420068 5.2:-83335618 MS.gene017497:CDS
TTGTAGGAAGACATTGTTAG+AGG 0.431010 5.2:-83335029 MS.gene017497:CDS
AGGGTTTCTGCTGTTTCAGC+AGG 0.433789 5.2:+83336237 None:intergenic
ATCAACAATACCATTGAGCT+TGG 0.439453 5.2:+83335642 None:intergenic
TTGCCGGATGAGCGAGTACT+TGG 0.446014 5.2:+83335332 None:intergenic
TTGGTCGCGAGGTTTAATAC+TGG 0.447893 5.2:+83335667 None:intergenic
AAGAGTGGCCATGTGGCAAT+AGG 0.448229 5.2:+83335247 None:intergenic
GTTCGATCTAAGAACCCTTC+AGG 0.448935 5.2:+83335394 None:intergenic
CCCATGGTTCCCTTCGGTGG+GGG 0.451431 5.2:+83335460 None:intergenic
ACTGGTCCCACCGGATAAAT+GGG 0.454333 5.2:+83335685 None:intergenic
GTACTCGCTCATCCGGCAAC+AGG 0.458535 5.2:-83335328 MS.gene017497:CDS
TCACCCATGGTTCCCTTCGG+TGG 0.458805 5.2:+83335457 None:intergenic
AAGAAATGAGTGAACATTGT+AGG 0.458997 5.2:-83335045 MS.gene017497:CDS
ACTTCAGACAAGATCGAGAA+AGG 0.460012 5.2:-83335115 MS.gene017497:CDS
ATCGATGTAGCTAACGACTT+TGG 0.462554 5.2:-83336024 MS.gene017497:CDS
CAAACCAAGGAAAGCAACAC+TGG 0.466572 5.2:+83335975 None:intergenic
TGGAGAGGTAAGGAAGAAAG+TGG 0.470892 5.2:-83335068 MS.gene017497:CDS
GATCCAAGTACTCGCTCATC+CGG 0.471917 5.2:-83335335 MS.gene017497:CDS
CATCCCTTGTTTCGCTAACC+CGG 0.472544 5.2:-83335878 MS.gene017497:CDS
GTCTCACCCATGGTTCCCTT+CGG 0.474365 5.2:+83335454 None:intergenic
CACTCATTCTTAGAAGATCC+AGG 0.476234 5.2:-83335721 MS.gene017497:CDS
ACAGTGGGAAACGTGTTTGT+AGG 0.476790 5.2:+83335853 None:intergenic
TCCTTGCGCAACACGACAGT+GGG 0.477715 5.2:+83335838 None:intergenic
GTTTATCCCTTCTCCAGGTG+TGG 0.477780 5.2:-83336355 MS.gene017497:CDS
ACTTGTGTCTGAGCTGAAGA+TGG 0.478242 5.2:-83335197 MS.gene017497:CDS
TTTCTCTGCTTTGGGAGCAA+GGG 0.481764 5.2:-83335565 MS.gene017497:CDS
TCAACAATACCATTGAGCTT+GGG 0.488826 5.2:+83335643 None:intergenic
AGACACAAGTTGAAAAGCAT+TGG 0.490836 5.2:+83335210 None:intergenic
CACTCGATTGCTGATTCAGC+AGG 0.492498 5.2:-83335911 MS.gene017497:CDS
AATAAGGAGTGTGTTGAAAA+CGG 0.492575 5.2:-83335092 MS.gene017497:CDS
GTGGTGTTTATCCCTTCTCC+AGG 0.494973 5.2:-83336360 MS.gene017497:CDS
GACTGGAAGGGTCATTGGAT+GGG 0.494988 5.2:-83335365 MS.gene017497:CDS
TGAAACAGCTTCTTTAACGT+TGG 0.500979 5.2:+83336101 None:intergenic
GGACTGGAAGGGTCATTGGA+TGG 0.502131 5.2:-83335366 MS.gene017497:CDS
GCTTTGTTTCGCATTGTGGT+TGG 0.502588 5.2:-83335303 MS.gene017497:CDS
GAAGCTGTTTCAAATATCAC+TGG 0.505145 5.2:-83336090 MS.gene017497:CDS
CAATGTAGGTAGCTCTGTAA+TGG 0.506883 5.2:-83336145 MS.gene017497:CDS
GGAGGCTTTGTTTCGCATTG+TGG 0.509430 5.2:-83335307 MS.gene017497:CDS
TTTATCCCTTCTCCAGGTGT+GGG 0.509833 5.2:-83336354 MS.gene017497:CDS
TCCCACTGTCGTGTTGCGCA+AGG 0.513845 5.2:-83335839 MS.gene017497:CDS
TTCTGAGTCAGAGGACAAAA+GGG 0.522019 5.2:+83336218 None:intergenic
ATGGGAAAACTGCGTAGACC+TGG 0.522382 5.2:+83335703 None:intergenic
AGGAGTGTGTTGAAAACGGA+TGG 0.523810 5.2:-83335088 MS.gene017497:CDS
CTGTCGTGTTGCGCAAGGAG+TGG 0.525721 5.2:-83335834 MS.gene017497:CDS
ACCCATGGTTCCCTTCGGTG+GGG 0.529299 5.2:+83335459 None:intergenic
TGAGCTTGGGTTTGGTCGCG+AGG 0.531826 5.2:+83335656 None:intergenic
CCATCTCCGTGTAACCGTCT+TGG 0.535141 5.2:-83336280 MS.gene017497:CDS
ATCGAACAGCTAGGACTGGA+AGG 0.539260 5.2:-83335378 MS.gene017497:CDS
TGTCGTGTTGCGCAAGGAGT+GGG 0.539887 5.2:-83335833 MS.gene017497:CDS
TATAGGATGGAGTACGATGT+TGG 0.542799 5.2:-83335154 MS.gene017497:CDS
TTAGATCGAACAGCTAGGAC+TGG 0.544645 5.2:-83335382 MS.gene017497:CDS
GAAGTGTAGTAGACGAGGGA+AGG 0.545022 5.2:+83335997 None:intergenic
GATTGCAGTTGATTATAGGA+TGG 0.545538 5.2:-83335167 MS.gene017497:CDS
GTCGTTAGCTACATCGATCA+TGG 0.547344 5.2:+83336029 None:intergenic
TTTCAGGGAGGTTGATGACA+TGG 0.547771 5.2:+83336190 None:intergenic
GTTTCCTCCACCTCCAATGT+AGG 0.548600 5.2:-83336159 MS.gene017497:CDS
TCTTTCATTAACTACGGCAG+AGG 0.551031 5.2:-83335805 MS.gene017497:CDS
TACAGAGCTACCTACATTGG+AGG 0.551558 5.2:+83336149 None:intergenic
GCGACCAAACCCAAGCTCAA+TGG 0.551945 5.2:-83335652 MS.gene017497:CDS
GAAACATCTTTCATTAACTA+CGG 0.552637 5.2:-83335811 MS.gene017497:CDS
GATACTAGATGTCCCACACC+TGG 0.553084 5.2:+83336342 None:intergenic
CTTGTGTCTGAGCTGAAGAT+GGG 0.562391 5.2:-83335196 MS.gene017497:CDS
CACTGGAAGTGTAGTAGACG+AGG 0.564744 5.2:+83335992 None:intergenic
GCTACCTACATTGGAGGTGG+AGG 0.567903 5.2:+83336155 None:intergenic
AGATGTCCCACACCTGGAGA+AGG 0.567924 5.2:+83336348 None:intergenic
TAGGATGAAGAAAGTAGAAG+TGG 0.567954 5.2:-83336379 None:intergenic
AAACTACTGAGGAAAGAGGT+TGG 0.573245 5.2:+83335587 None:intergenic
TGAGAAGCTTAGCAAACTCA+AGG 0.580257 5.2:+83336316 None:intergenic
GAAACGTGTTTGTAGGAACC+GGG 0.590783 5.2:+83335860 None:intergenic
TGAAAACGGATGGAGAGGTA+AGG 0.592091 5.2:-83335078 MS.gene017497:CDS
TGTGTTGAAAACGGATGGAG+AGG 0.592464 5.2:-83335083 MS.gene017497:CDS
AGGAAGACATTGTTAGAGGG+TGG 0.592810 5.2:-83335025 MS.gene017497:CDS
AGAGCTACCTACATTGGAGG+TGG 0.596345 5.2:+83336152 None:intergenic
CTCGCTCATCCGGCAACAGG+AGG 0.599368 5.2:-83335325 MS.gene017497:CDS
AGAGGACTCAAGAAAGCAAG+TGG 0.601609 5.2:-83335787 MS.gene017497:CDS
TGAGCGAGTACTTGGATCTG+AGG 0.603544 5.2:+83335340 None:intergenic
GTTTGTTGATCAGCAAAGAG+TGG 0.604260 5.2:+83335232 None:intergenic
GGAACCGGGTTAGCGAAACA+AGG 0.604340 5.2:+83335874 None:intergenic
CTCCTTGCGCAACACGACAG+TGG 0.605275 5.2:+83335837 None:intergenic
CCAAGACGGTTACACGGAGA+TGG 0.606080 5.2:+83336280 None:intergenic
GTCTGAGCTGAAGATGGGTG+TGG 0.607621 5.2:-83335191 MS.gene017497:CDS
GATGTCCCACACCTGGAGAA+GGG 0.608886 5.2:+83336349 None:intergenic
CATTACAGAGCTACCTACAT+TGG 0.611122 5.2:+83336146 None:intergenic
GGTTCTTAGATCGAACAGCT+AGG 0.611312 5.2:-83335387 MS.gene017497:CDS
CAAACTACCTAAGCAAGTGT+AGG 0.617705 5.2:+83334997 None:intergenic
AAAGTGAGGCTCGCTTCCTG+TGG 0.617975 5.2:-83335495 MS.gene017497:CDS
AGGTTTAATACTGGTCCCAC+CGG 0.617996 5.2:+83335676 None:intergenic
TGTAGGAAGACATTGTTAGA+GGG 0.622413 5.2:-83335028 MS.gene017497:CDS
TCGAACAGCTAGGACTGGAA+GGG 0.623063 5.2:-83335377 MS.gene017497:CDS
GAGCAAGGGTTCTTTCGATG+AGG 0.625941 5.2:-83335551 MS.gene017497:CDS
TGGAAACTTGATGACCAAGA+CGG 0.633777 5.2:+83336266 None:intergenic
AAGTGTAGTAGACGAGGGAA+GGG 0.638345 5.2:+83335998 None:intergenic
TGATGACCAAGACGGTTACA+CGG 0.640615 5.2:+83336274 None:intergenic
CTGCTGAATCAGCAATCGAG+TGG 0.646216 5.2:+83335912 None:intergenic
AAGCTTAGCAAACTCAAGGG+TGG 0.656881 5.2:+83336320 None:intergenic
GAGAAGCTTAGCAAACTCAA+GGG 0.660114 5.2:+83336317 None:intergenic
GTAATCGGATGTCTCACCCA+TGG 0.671288 5.2:+83335444 None:intergenic
TTACACGGAGATGGTTATCA+CGG 0.675104 5.2:+83336289 None:intergenic
ATCAGCAAAGAGTGGCCATG+TGG 0.679393 5.2:+83335240 None:intergenic
GAACCGGGTTAGCGAAACAA+GGG 0.682553 5.2:+83335875 None:intergenic
GAAGATGAAGCACCAAACCA+AGG 0.686164 5.2:+83335962 None:intergenic
GCAGAACATGTCAACAACGA+AGG 0.691669 5.2:+83336056 None:intergenic
ATGGTGTACCTATTGCCACA+TGG 0.698000 5.2:-83335255 MS.gene017497:CDS
GAGGACTCAAGAAAGCAAGT+GGG 0.708197 5.2:-83335786 MS.gene017497:CDS
ACTGGAAGTGTAGTAGACGA+GGG 0.716356 5.2:+83335993 None:intergenic
GTATGCTATTGAGAAAAGTG+AGG 0.724008 5.2:-83335509 MS.gene017497:CDS
GTTAGCTACATCGATCATGG+TGG 0.749067 5.2:+83336032 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! CTGATGACATTATTATTAAG+TGG - chr5.2:83335727-83335746 MS.gene017497:CDS 25.0%
! GAAACATCTTTCATTAACTA+CGG - chr5.2:83335534-83335553 MS.gene017497:CDS 25.0%
AAGAAATGAGTGAACATTGT+AGG - chr5.2:83336300-83336319 MS.gene017497:CDS 30.0%
CAAATCAGAAAGAGAGTAAT+CGG + chr5.2:83335919-83335938 None:intergenic 30.0%
TTTCGATGAGGATCAAATTA+GGG - chr5.2:83335806-83335825 MS.gene017497:CDS 30.0%
! AATAAGGAGTGTGTTGAAAA+CGG - chr5.2:83336253-83336272 MS.gene017497:CDS 30.0%
! AGGAAACATGAGTATTTTCA+GGG + chr5.2:83335173-83335192 None:intergenic 30.0%
!!! TTCTTTAACGTTGGCTTTTT+GGG + chr5.2:83335238-83335257 None:intergenic 30.0%
AAAGCAGAGAAAAACTACTG+AGG + chr5.2:83335772-83335791 None:intergenic 35.0%
ACAAGATCGAGAAAGGAATA+AGG - chr5.2:83336237-83336256 MS.gene017497:CDS 35.0%
AGAAAAACTACTGAGGAAAG+AGG + chr5.2:83335765-83335784 None:intergenic 35.0%
ATCAACAATACCATTGAGCT+TGG + chr5.2:83335706-83335725 None:intergenic 35.0%
CGATTACTCTCTTTCTGATT+TGG - chr5.2:83335917-83335936 MS.gene017497:CDS 35.0%
CTTTCGATGAGGATCAAATT+AGG - chr5.2:83335805-83335824 MS.gene017497:CDS 35.0%
GATTGCAGTTGATTATAGGA+TGG - chr5.2:83336178-83336197 MS.gene017497:CDS 35.0%
GTATGCTATTGAGAAAAGTG+AGG - chr5.2:83335836-83335855 MS.gene017497:CDS 35.0%
TCAACAATACCATTGAGCTT+GGG + chr5.2:83335705-83335724 None:intergenic 35.0%
TGAAACAGCTTCTTTAACGT+TGG + chr5.2:83335247-83335266 None:intergenic 35.0%
TGGAGATTGCAGTTGATTAT+AGG - chr5.2:83336174-83336193 MS.gene017497:CDS 35.0%
TGTAGGAAGACATTGTTAGA+GGG - chr5.2:83336317-83336336 MS.gene017497:CDS 35.0%
TTGTAGGAAGACATTGTTAG+AGG - chr5.2:83336316-83336335 MS.gene017497:CDS 35.0%
! ACTCTCGAGAGCATATATTA+TGG - chr5.2:83336071-83336090 MS.gene017497:CDS 35.0%
! AGACACAAGTTGAAAAGCAT+TGG + chr5.2:83336138-83336157 None:intergenic 35.0%
! CAGTAGTTTTTCTCTGCTTT+GGG - chr5.2:83335772-83335791 MS.gene017497:CDS 35.0%
! GAAGCTGTTTCAAATATCAC+TGG - chr5.2:83335255-83335274 MS.gene017497:CDS 35.0%
! GAGGAAACATGAGTATTTTC+AGG + chr5.2:83335174-83335193 None:intergenic 35.0%
! TCAGTAGTTTTTCTCTGCTT+TGG - chr5.2:83335771-83335790 MS.gene017497:CDS 35.0%
!! AAACATGAGTATTTTCAGGG+AGG + chr5.2:83335170-83335189 None:intergenic 35.0%
!!! CTTCTTTAACGTTGGCTTTT+TGG + chr5.2:83335239-83335258 None:intergenic 35.0%
AAACTACTGAGGAAAGAGGT+TGG + chr5.2:83335761-83335780 None:intergenic 40.0%
AATACCATTGAGCTTGGGTT+TGG + chr5.2:83335700-83335719 None:intergenic 40.0%
ACTTCAGACAAGATCGAGAA+AGG - chr5.2:83336230-83336249 MS.gene017497:CDS 40.0%
ATCGATGTAGCTAACGACTT+TGG - chr5.2:83335321-83335340 MS.gene017497:CDS 40.0%
CAAACTACCTAAGCAAGTGT+AGG + chr5.2:83336351-83336370 None:intergenic 40.0%
CACTCATTCTTAGAAGATCC+AGG - chr5.2:83335624-83335643 MS.gene017497:CDS 40.0%
CATTACAGAGCTACCTACAT+TGG + chr5.2:83335202-83335221 None:intergenic 40.0%
GAGAAGCTTAGCAAACTCAA+GGG + chr5.2:83335031-83335050 None:intergenic 40.0%
TATAGGATGGAGTACGATGT+TGG - chr5.2:83336191-83336210 MS.gene017497:CDS 40.0%
TCTTTCATTAACTACGGCAG+AGG - chr5.2:83335540-83335559 MS.gene017497:CDS 40.0%
TGAGAAGCTTAGCAAACTCA+AGG + chr5.2:83335032-83335051 None:intergenic 40.0%
TTACACGGAGATGGTTATCA+CGG + chr5.2:83335059-83335078 None:intergenic 40.0%
TTCTGAGTCAGAGGACAAAA+GGG + chr5.2:83335130-83335149 None:intergenic 40.0%
TTTCTGAGTCAGAGGACAAA+AGG + chr5.2:83335131-83335150 None:intergenic 40.0%
! ACGCAGTTTTCCCATTTATC+CGG - chr5.2:83335650-83335669 MS.gene017497:CDS 40.0%
! AGTTTTCCCATTTATCCGGT+GGG - chr5.2:83335654-83335673 MS.gene017497:CDS 40.0%
! ATGGAGATTTTCTGAGTCAG+AGG + chr5.2:83335139-83335158 None:intergenic 40.0%
! CAATGTAGGTAGCTCTGTAA+TGG - chr5.2:83335200-83335219 MS.gene017497:CDS 40.0%
! GTTTGTTGATCAGCAAAGAG+TGG + chr5.2:83336116-83336135 None:intergenic 40.0%
! TGGAAACTTGATGACCAAGA+CGG + chr5.2:83335082-83335101 None:intergenic 40.0%
!! CTCTCTTTCTGATTTGGTTG+TGG - chr5.2:83335923-83335942 MS.gene017497:CDS 40.0%
!! TGGTTGTGGTTTTACCTGAA+GGG - chr5.2:83335937-83335956 MS.gene017497:CDS 40.0%
!! TTGGTTGTGGTTTTACCTGA+AGG - chr5.2:83335936-83335955 MS.gene017497:CDS 40.0%
AAGCTTAGCAAACTCAAGGG+TGG + chr5.2:83335028-83335047 None:intergenic 45.0%
AAGTGTAGTAGACGAGGGAA+GGG + chr5.2:83335350-83335369 None:intergenic 45.0%
ACAGTGGGAAACGTGTTTGT+AGG + chr5.2:83335495-83335514 None:intergenic 45.0%
ACTTGTGTCTGAGCTGAAGA+TGG - chr5.2:83336148-83336167 MS.gene017497:CDS 45.0%
AGAGGACTCAAGAAAGCAAG+TGG - chr5.2:83335558-83335577 MS.gene017497:CDS 45.0%
AGGAAGACATTGTTAGAGGG+TGG - chr5.2:83336320-83336339 MS.gene017497:CDS 45.0%
AGGTTTAATACTGGTCCCAC+CGG + chr5.2:83335672-83335691 None:intergenic 45.0%
ATGGTGTACCTATTGCCACA+TGG - chr5.2:83336090-83336109 MS.gene017497:CDS 45.0%
CAAACCAAGGAAAGCAACAC+TGG + chr5.2:83335373-83335392 None:intergenic 45.0%
CTTGTGTCTGAGCTGAAGAT+GGG - chr5.2:83336149-83336168 MS.gene017497:CDS 45.0%
GAAACGTGTTTGTAGGAACC+GGG + chr5.2:83335488-83335507 None:intergenic 45.0%
GAGGACTCAAGAAAGCAAGT+GGG - chr5.2:83335559-83335578 MS.gene017497:CDS 45.0%
GCAGAACATGTCAACAACGA+AGG + chr5.2:83335292-83335311 None:intergenic 45.0%
GGAAACGTGTTTGTAGGAAC+CGG + chr5.2:83335489-83335508 None:intergenic 45.0%
GGATCTTCCTACACTTGCTT+AGG - chr5.2:83336341-83336360 MS.gene017497:CDS 45.0%
GGTTCTTAGATCGAACAGCT+AGG - chr5.2:83335958-83335977 MS.gene017497:CDS 45.0%
GTCGTTAGCTACATCGATCA+TGG + chr5.2:83335319-83335338 None:intergenic 45.0%
GTTAGCTACATCGATCATGG+TGG + chr5.2:83335316-83335335 None:intergenic 45.0%
GTTCGATCTAAGAACCCTTC+AGG + chr5.2:83335954-83335973 None:intergenic 45.0%
TACAGAGCTACCTACATTGG+AGG + chr5.2:83335199-83335218 None:intergenic 45.0%
TGAAAACGGATGGAGAGGTA+AGG - chr5.2:83336267-83336286 MS.gene017497:CDS 45.0%
TGATGACCAAGACGGTTACA+CGG + chr5.2:83335074-83335093 None:intergenic 45.0%
TGGAGAGGTAAGGAAGAAAG+TGG - chr5.2:83336277-83336296 MS.gene017497:CDS 45.0%
TGTGTTGAAAACGGATGGAG+AGG - chr5.2:83336262-83336281 MS.gene017497:CDS 45.0%
TTAGATCGAACAGCTAGGAC+TGG - chr5.2:83335963-83335982 MS.gene017497:CDS 45.0%
TTGGTCGCGAGGTTTAATAC+TGG + chr5.2:83335681-83335700 None:intergenic 45.0%
TTTATCCCTTCTCCAGGTGT+GGG - chr5.2:83334991-83335010 MS.gene017497:CDS 45.0%
! ACTGGAAGTGTAGTAGACGA+GGG + chr5.2:83335355-83335374 None:intergenic 45.0%
! AGGAGTGTGTTGAAAACGGA+TGG - chr5.2:83336257-83336276 MS.gene017497:CDS 45.0%
! CAGTTTTCCCATTTATCCGG+TGG - chr5.2:83335653-83335672 MS.gene017497:CDS 45.0%
! GAAGATGAAGCACCAAACCA+AGG + chr5.2:83335386-83335405 None:intergenic 45.0%
! GCTGATTCAGCAGGATGAAT+TGG - chr5.2:83335443-83335462 MS.gene017497:CDS 45.0%
!! ACTTCCAGTGTTGCTTTCCT+TGG - chr5.2:83335366-83335385 MS.gene017497:CDS 45.0%
!! CAGTGTTGCTTTCCTTGGTT+TGG - chr5.2:83335371-83335390 MS.gene017497:CDS 45.0%
!! GCTTTGTTTCGCATTGTGGT+TGG - chr5.2:83336042-83336061 MS.gene017497:CDS 45.0%
!! TTTCAGGGAGGTTGATGACA+TGG + chr5.2:83335158-83335177 None:intergenic 45.0%
!! TTTCTCTGCTTTGGGAGCAA+GGG - chr5.2:83335780-83335799 MS.gene017497:CDS 45.0%
!!! TTTTCTCTGCTTTGGGAGCA+AGG - chr5.2:83335779-83335798 MS.gene017497:CDS 45.0%
AAGAGTGGCCATGTGGCAAT+AGG + chr5.2:83336101-83336120 None:intergenic 50.0%
ACTGGTCCCACCGGATAAAT+GGG + chr5.2:83335663-83335682 None:intergenic 50.0%
AGAGCTACCTACATTGGAGG+TGG + chr5.2:83335196-83335215 None:intergenic 50.0%
ATCAGCAAAGAGTGGCCATG+TGG + chr5.2:83336108-83336127 None:intergenic 50.0%
ATCGAACAGCTAGGACTGGA+AGG - chr5.2:83335967-83335986 MS.gene017497:CDS 50.0%
ATGGGAAAACTGCGTAGACC+TGG + chr5.2:83335645-83335664 None:intergenic 50.0%
CTGCTGAATCAGCAATCGAG+TGG + chr5.2:83335436-83335455 None:intergenic 50.0%
GAAACAAAGCCTCCTGTTGC+CGG + chr5.2:83336032-83336051 None:intergenic 50.0%
GAAGTGTAGTAGACGAGGGA+AGG + chr5.2:83335351-83335370 None:intergenic 50.0%
GACTGGAAGGGTCATTGGAT+GGG - chr5.2:83335980-83335999 MS.gene017497:CDS 50.0%
GAGCAAGGGTTCTTTCGATG+AGG - chr5.2:83335794-83335813 MS.gene017497:CDS 50.0%
GATACTAGATGTCCCACACC+TGG + chr5.2:83335006-83335025 None:intergenic 50.0%
GATCCAAGTACTCGCTCATC+CGG - chr5.2:83336010-83336029 MS.gene017497:CDS 50.0%
GTAATCGGATGTCTCACCCA+TGG + chr5.2:83335904-83335923 None:intergenic 50.0%
GTGGTGTTTATCCCTTCTCC+AGG - chr5.2:83334985-83335004 MS.gene017497:CDS 50.0%
GTTTATCCCTTCTCCAGGTG+TGG - chr5.2:83334990-83335009 MS.gene017497:CDS 50.0%
GTTTCCTCCACCTCCAATGT+AGG - chr5.2:83335186-83335205 MS.gene017497:CDS 50.0%
TACTGGTCCCACCGGATAAA+TGG + chr5.2:83335664-83335683 None:intergenic 50.0%
TCGAACAGCTAGGACTGGAA+GGG - chr5.2:83335968-83335987 MS.gene017497:CDS 50.0%
TGAGCGAGTACTTGGATCTG+AGG + chr5.2:83336008-83336027 None:intergenic 50.0%
! CACTGGAAGTGTAGTAGACG+AGG + chr5.2:83335356-83335375 None:intergenic 50.0%
! CATCCCTTGTTTCGCTAACC+CGG - chr5.2:83335467-83335486 MS.gene017497:CDS 50.0%
! GCTGTTTCAGCAGGACTGTT+TGG + chr5.2:83335102-83335121 None:intergenic 50.0%
!! AGGGTTTCTGCTGTTTCAGC+AGG + chr5.2:83335111-83335130 None:intergenic 50.0%
!! CACTCGATTGCTGATTCAGC+AGG - chr5.2:83335434-83335453 MS.gene017497:CDS 50.0%
!! GAACCGGGTTAGCGAAACAA+GGG + chr5.2:83335473-83335492 None:intergenic 50.0%
!! GGAGGCTTTGTTTCGCATTG+TGG - chr5.2:83336038-83336057 MS.gene017497:CDS 50.0%
AAAGTGAGGCTCGCTTCCTG+TGG - chr5.2:83335850-83335869 MS.gene017497:CDS 55.0%
AGATGTCCCACACCTGGAGA+AGG + chr5.2:83335000-83335019 None:intergenic 55.0%
CCAAGACGGTTACACGGAGA+TGG + chr5.2:83335068-83335087 None:intergenic 55.0%
CCATCTCCGTGTAACCGTCT+TGG - chr5.2:83335065-83335084 MS.gene017497:CDS 55.0%
GATGTCCCACACCTGGAGAA+GGG + chr5.2:83334999-83335018 None:intergenic 55.0%
GCGACCAAACCCAAGCTCAA+TGG - chr5.2:83335693-83335712 MS.gene017497:CDS 55.0%
GCTACCTACATTGGAGGTGG+AGG + chr5.2:83335193-83335212 None:intergenic 55.0%
GCTAGGACTGGAAGGGTCAT+TGG - chr5.2:83335975-83335994 MS.gene017497:CDS 55.0%
GGACTGGAAGGGTCATTGGA+TGG - chr5.2:83335979-83335998 MS.gene017497:CDS 55.0%
GTCTCACCCATGGTTCCCTT+CGG + chr5.2:83335894-83335913 None:intergenic 55.0%
GTCTGAGCTGAAGATGGGTG+TGG - chr5.2:83336154-83336173 MS.gene017497:CDS 55.0%
TCCTTGCGCAACACGACAGT+GGG + chr5.2:83335510-83335529 None:intergenic 55.0%
TGTCGTGTTGCGCAAGGAGT+GGG - chr5.2:83335512-83335531 MS.gene017497:CDS 55.0%
TTGCCGGATGAGCGAGTACT+TGG + chr5.2:83336016-83336035 None:intergenic 55.0%
!! GGAACCGGGTTAGCGAAACA+AGG + chr5.2:83335474-83335493 None:intergenic 55.0%
ACCCATGGTTCCCTTCGGTG+GGG + chr5.2:83335889-83335908 None:intergenic 60.0%
CACCCATGGTTCCCTTCGGT+GGG + chr5.2:83335890-83335909 None:intergenic 60.0%
CTCCTTGCGCAACACGACAG+TGG + chr5.2:83335511-83335530 None:intergenic 60.0%
CTGCGAAAACCCCCACCGAA+GGG - chr5.2:83335876-83335895 MS.gene017497:CDS 60.0%
CTGTCGTGTTGCGCAAGGAG+TGG - chr5.2:83335511-83335530 MS.gene017497:CDS 60.0%
GTACTCGCTCATCCGGCAAC+AGG - chr5.2:83336017-83336036 MS.gene017497:CDS 60.0%
TCACCCATGGTTCCCTTCGG+TGG + chr5.2:83335891-83335910 None:intergenic 60.0%
TCCCACTGTCGTGTTGCGCA+AGG - chr5.2:83335506-83335525 MS.gene017497:CDS 60.0%
TCTGCGAAAACCCCCACCGA+AGG - chr5.2:83335875-83335894 MS.gene017497:CDS 60.0%
! GGGGTTTTCGCAGAGACCAC+AGG + chr5.2:83335869-83335888 None:intergenic 60.0%
! TGAGCTTGGGTTTGGTCGCG+AGG + chr5.2:83335692-83335711 None:intergenic 60.0%
ACCCCCACCGAAGGGAACCA+TGG - chr5.2:83335884-83335903 MS.gene017497:CDS 65.0%
CCCATGGTTCCCTTCGGTGG+GGG + chr5.2:83335888-83335907 None:intergenic 65.0%
CCCCCACCGAAGGGAACCAT+GGG - chr5.2:83335885-83335904 MS.gene017497:CDS 65.0%
CTCGCTCATCCGGCAACAGG+AGG - chr5.2:83336020-83336039 MS.gene017497:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 83334970 83336397 83334970 ID=MS.gene017497
chr5.2 mRNA 83334970 83336397 83334970 ID=MS.gene017497.t1;Parent=MS.gene017497
chr5.2 exon 83334970 83336397 83334970 ID=MS.gene017497.t1.exon1;Parent=MS.gene017497.t1
chr5.2 CDS 83334970 83336397 83334970 ID=cds.MS.gene017497.t1;Parent=MS.gene017497.t1
Gene Sequence

>MS.gene017497

ATGAAGAAAGTAGAAGTGGTGTTTATCCCTTCTCCAGGTGTGGGACATCTAGTATCCACCCTTGAGTTTGCTAAGCTTCTCATCAACCGTGATAACCATCTCCGTGTAACCGTCTTGGTCATCAAGTTTCCAAACAGTCCTGCTGAAACAGCAGAAACCCTTTTGTCCTCTGACTCAGAAAATCTCCATGTCATCAACCTCCCTGAAAATACTCATGTTTCCTCCACCTCCAATGTAGGTAGCTCTGTAATGGCTCTTGTTGAAACCCAAAAAGCCAACGTTAAAGAAGCTGTTTCAAATATCACTGGAAAGCTCGCTGCCTTCGTTGTTGACATGTTCTGCACCACCATGATCGATGTAGCTAACGACTTTGGCGTCCCTTCCCTCGTCTACTACACTTCCAGTGTTGCTTTCCTTGGTTTGGTGCTTCATCTTCACACACTTTTCGAAGACAACATCGAAGCCACTCGATTGCTGATTCAGCAGGATGAATTGGACATCCCTTGTTTCGCTAACCCGGTTCCTACAAACACGTTTCCCACTGTCGTGTTGCGCAAGGAGTGGGAAACATCTTTCATTAACTACGGCAGAGGACTCAAGAAAGCAAGTGGGATCATAGTAAATTCATTTCATGAGTTAGAATCTCATGCAGTTCACTCATTCTTAGAAGATCCAGGTCTACGCAGTTTTCCCATTTATCCGGTGGGACCAGTATTAAACCTCGCGACCAAACCCAAGCTCAATGGTATTGTTGATTCTGATGACATTATTATTAAGTGGCTCGATGACCAACCTCTTTCCTCAGTAGTTTTTCTCTGCTTTGGGAGCAAGGGTTCTTTCGATGAGGATCAAATTAGGGAGATTGCGTATGCTATTGAGAAAAGTGAGGCTCGCTTCCTGTGGTCTCTGCGAAAACCCCCACCGAAGGGAACCATGGGTGAGACATCCGATTACTCTCTTTCTGATTTGGTTGTGGTTTTACCTGAAGGGTTCTTAGATCGAACAGCTAGGACTGGAAGGGTCATTGGATGGGCTCCTCAGATCCAAGTACTCGCTCATCCGGCAACAGGAGGCTTTGTTTCGCATTGTGGTTGGAATTCGACTCTCGAGAGCATATATTATGGTGTACCTATTGCCACATGGCCACTCTTTGCTGATCAACAAACCAATGCTTTTCAACTTGTGTCTGAGCTGAAGATGGGTGTGGAGATTGCAGTTGATTATAGGATGGAGTACGATGTTGGACGTGACTATCTTTTAACTTCAGACAAGATCGAGAAAGGAATAAGGAGTGTGTTGAAAACGGATGGAGAGGTAAGGAAGAAAGTGGAAGAAATGAGTGAACATTGTAGGAAGACATTGTTAGAGGGTGGATCTTCCTACACTTGCTTAGGTAGTTTGATTGATTATATTATGAATCATGTATGA
Protein sequence

>MS.gene017497.t1

MKKVEVVFIPSPGVGHLVSTLEFAKLLINRDNHLRVTVLVIKFPNSPAETAETLLSSDSENLHVINLPENTHVSSTSNVGSSVMALVETQKANVKEAVSNITGKLAAFVVDMFCTTMIDVANDFGVPSLVYYTSSVAFLGLVLHLHTLFEDNIEATRLLIQQDELDIPCFANPVPTNTFPTVVLRKEWETSFINYGRGLKKASGIIVNSFHELESHAVHSFLEDPGLRSFPIYPVGPVLNLATKPKLNGIVDSDDIIIKWLDDQPLSSVVFLCFGSKGSFDEDQIREIAYAIEKSEARFLWSLRKPPPKGTMGETSDYSLSDLVVVLPEGFLDRTARTGRVIGWAPQIQVLAHPATGGFVSHCGWNSTLESIYYGVPIATWPLFADQQTNAFQLVSELKMGVEIAVDYRMEYDVGRDYLLTSDKIEKGIRSVLKTDGEVRKKVEEMSEHCRKTLLEGGSSYTCLGSLIDYIMNHV