AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47733

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47733.t1 MTR_5g090600 79.622 476 32 2 1 428 1 459 0.0 748
MS.gene47733.t1 MTR_5g090580 74.686 478 69 4 1 426 1 478 0.0 691
MS.gene47733.t1 MTR_5g090700 67.909 483 99 6 1 428 1 482 0.0 624
MS.gene47733.t1 MTR_5g090660 67.155 478 105 4 1 427 1 477 0.0 615
MS.gene47733.t1 MTR_5g090670 66.944 481 103 6 1 426 1 480 0.0 605
MS.gene47733.t1 MTR_5g090620 65.762 479 111 5 1 426 1 479 0.0 603
MS.gene47733.t1 MTR_5g090610 65.336 476 105 4 1 427 1 465 0.0 599
MS.gene47733.t1 MTR_5g090630 65.618 477 105 5 1 426 1 469 0.0 585
MS.gene47733.t1 MTR_5g098930 58.958 480 134 9 1 426 1 471 0.0 515
MS.gene47733.t1 MTR_5g090650 62.428 346 95 6 1 343 1 314 1.52e-139 402
MS.gene47733.t1 MTR_5g090690 54.897 388 108 6 65 416 18 374 4.97e-118 350
MS.gene47733.t1 MTR_5g070040 35.443 474 240 15 2 423 8 467 1.11e-79 254
MS.gene47733.t1 MTR_5g070090 35.484 465 245 13 2 422 8 461 1.22e-76 246
MS.gene47733.t1 MTR_2g040530 34.990 483 230 16 1 420 1 462 1.10e-75 243
MS.gene47733.t1 MTR_2g046820 34.304 481 234 14 1 420 1 460 1.17e-74 241
MS.gene47733.t1 MTR_2g046750 33.402 482 240 16 1 420 1 463 1.07e-70 230
MS.gene47733.t1 MTR_3g009510 27.423 485 276 18 1 420 1 474 3.05e-44 160
MS.gene47733.t1 MTR_7g117170 29.399 466 266 13 6 418 16 471 6.54e-43 157
MS.gene47733.t1 MTR_6g023665 27.696 473 271 14 2 418 10 467 3.30e-40 150
MS.gene47733.t1 MTR_6g488280 26.907 472 274 14 3 418 4 460 3.75e-38 144
MS.gene47733.t1 MTR_0428s0010 26.907 472 274 14 3 418 4 460 3.75e-38 144
MS.gene47733.t1 MTR_8g006220 29.745 353 226 7 2 340 3 347 3.39e-37 142
MS.gene47733.t1 MTR_8g465670 29.855 345 228 6 2 340 4 340 9.79e-37 140
MS.gene47733.t1 MTR_8g027870 28.358 469 261 16 6 418 19 468 2.84e-35 136
MS.gene47733.t1 MTR_6g033675 31.579 361 201 15 3 340 2 339 7.75e-35 135
MS.gene47733.t1 MTR_8g006730 24.375 480 280 14 2 418 3 462 4.33e-34 132
MS.gene47733.t1 MTR_0184s0040 30.226 354 220 11 2 342 18 357 8.19e-34 132
MS.gene47733.t1 MTR_0078s0190 30.226 354 220 11 2 342 18 357 8.19e-34 132
MS.gene47733.t1 MTR_8g027885 27.872 470 262 17 6 418 19 468 1.87e-33 131
MS.gene47733.t1 MTR_8g006710 23.299 485 290 14 2 424 3 467 3.07e-32 127
MS.gene47733.t1 MTR_0078s0010 28.977 352 223 14 2 340 3 340 5.58e-32 127
MS.gene47733.t1 MTR_8g077590 28.286 350 228 11 4 343 8 344 1.30e-30 123
MS.gene47733.t1 MTR_8g074550 24.597 496 293 17 2 425 5 491 3.18e-30 122
MS.gene47733.t1 MTR_7g047030 28.205 351 227 13 2 340 3 340 8.38e-30 120
MS.gene47733.t1 MTR_7g047270 28.205 351 227 13 2 340 3 340 8.38e-30 120
MS.gene47733.t1 MTR_8g006270 30.636 346 219 11 2 338 3 336 1.01e-29 120
MS.gene47733.t1 MTR_0078s0060 29.545 352 220 13 2 340 3 339 1.40e-29 120
MS.gene47733.t1 MTR_8g009050 25.212 472 286 13 2 418 3 462 1.87e-28 117
MS.gene47733.t1 MTR_0184s0030 25.373 469 278 16 2 412 3 457 2.27e-28 117
MS.gene47733.t1 MTR_5g019580 25.667 487 276 17 2 418 4 474 5.98e-28 115
MS.gene47733.t1 MTR_8g009055 25.053 475 283 16 2 418 3 462 1.84e-27 114
MS.gene47733.t1 MTR_8g009073 25.106 470 287 15 2 418 3 460 3.01e-27 113
MS.gene47733.t1 MTR_8g009063 23.779 471 294 12 2 418 10 469 1.47e-26 111
MS.gene47733.t1 MTR_6g033615 24.786 468 263 14 3 411 2 439 1.63e-26 111
MS.gene47733.t1 MTR_1g019510 26.857 350 231 10 2 340 3 338 1.99e-26 111
MS.gene47733.t1 MTR_6g033725 27.401 354 222 13 3 340 2 336 4.39e-26 110
MS.gene47733.t1 MTR_8g012635 28.099 363 218 12 2 340 3 346 4.99e-26 110
MS.gene47733.t1 MTR_8g009067 24.528 477 283 15 2 419 3 461 8.08e-26 109
MS.gene47733.t1 MTR_6g033625 24.948 485 269 16 3 418 2 460 3.34e-25 107
MS.gene47733.t1 MTR_8g012650 30.453 243 152 7 109 340 110 346 3.35e-25 107
MS.gene47733.t1 MTR_8g008990 25.000 476 284 15 2 418 3 464 8.71e-25 106
MS.gene47733.t1 MTR_8g006260 25.478 471 273 17 3 411 4 458 8.85e-25 106
MS.gene47733.t1 MTR_6g033660 26.074 349 229 7 6 340 5 338 1.32e-24 105
MS.gene47733.t1 MTR_8g012745 29.231 260 173 6 91 343 92 347 2.42e-24 105
MS.gene47733.t1 MTR_7g046490 25.105 478 278 16 2 419 3 460 3.79e-24 104
MS.gene47733.t1 MTR_6g005600 26.705 352 237 9 3 343 4 345 9.15e-24 103
MS.gene47733.t1 MTR_0078s0200 27.619 315 203 11 2 303 3 305 1.68e-23 100
MS.gene47733.t1 MTR_8g008970 26.420 352 231 11 2 340 3 339 1.46e-22 100
MS.gene47733.t1 MTR_4g117890 22.954 501 270 17 2 422 10 474 1.08e-21 97.4
MS.gene47733.t1 MTR_0536s0020 24.444 495 266 17 2 420 15 477 1.29e-21 97.4
MS.gene47733.t1 MTR_5g029800 24.248 499 265 19 5 422 11 477 1.38e-21 97.1
MS.gene47733.t1 MTR_4g095008 24.936 389 217 11 87 419 92 461 1.54e-21 97.4
MS.gene47733.t1 MTR_3g069710 25.620 484 260 18 2 424 9 453 1.66e-21 96.7
MS.gene47733.t1 MTR_6g078320 24.765 319 218 10 4 303 10 325 3.56e-21 95.9
MS.gene47733.t1 MTR_8g006230 28.452 239 150 7 83 310 26 254 1.46e-20 91.7
MS.gene47733.t1 MTR_2g098430 26.374 364 219 18 2 339 3 343 4.59e-20 92.8
MS.gene47733.t1 MTR_5g019580 27.431 288 145 9 190 418 216 498 8.37e-20 92.0
MS.gene47733.t1 MTR_6g035265 22.449 490 271 16 8 420 14 471 1.75e-19 90.9
MS.gene47733.t1 MTR_4g031800 23.313 489 293 16 2 426 6 476 2.28e-19 90.5
MS.gene47733.t1 MTR_8g064870 25.620 363 223 14 5 343 11 350 5.45e-19 89.4
MS.gene47733.t1 MTR_8g064880 26.301 365 220 16 6 343 10 352 9.77e-19 88.6
MS.gene47733.t1 MTR_5g035580 24.689 482 260 21 6 424 14 455 1.74e-18 87.8
MS.gene47733.t1 MTR_5g464760 24.868 378 222 12 3 343 10 362 4.23e-18 86.7
MS.gene47733.t1 MTR_1g107360 23.941 472 292 18 5 425 9 464 4.57e-18 86.7
MS.gene47733.t1 MTR_3g009500 29.537 281 168 13 1 263 1 269 6.29e-18 83.6
MS.gene47733.t1 MTR_5g090680 90.476 42 4 0 1 42 1 42 8.66e-18 79.3
MS.gene47733.t1 MTR_4g094920 23.454 469 267 15 15 419 36 476 9.49e-18 85.5
MS.gene47733.t1 MTR_8g009067 24.058 345 210 9 122 419 4 343 1.24e-17 84.3
MS.gene47733.t1 MTR_3g479520 23.366 505 275 16 2 425 12 485 1.26e-17 85.1
MS.gene47733.t1 MTR_6g035185 22.561 492 277 15 8 420 14 480 1.33e-17 85.1
MS.gene47733.t1 MTR_4g117960 21.573 496 275 18 8 420 14 478 1.60e-17 85.1
MS.gene47733.t1 MTR_4g082810 25.962 312 211 9 5 303 7 311 2.40e-17 84.0
MS.gene47733.t1 MTR_8g009073 26.255 259 142 7 205 418 77 331 1.34e-16 80.9
MS.gene47733.t1 MTR_7g102460 22.908 502 287 21 3 425 7 487 1.72e-16 81.6
MS.gene47733.t1 MTR_3g009520 29.020 255 157 11 6 243 7 254 1.76e-16 79.3
MS.gene47733.t1 MTR_4g082820 25.080 311 210 10 6 303 8 308 2.29e-16 81.3
MS.gene47733.t1 MTR_3g049970 22.449 490 285 17 5 425 9 472 2.67e-16 81.3
MS.gene47733.t1 MTR_5g031840 23.750 480 289 19 1 422 1 461 4.08e-16 80.5
MS.gene47733.t1 MTR_8g066610 25.203 369 211 11 6 340 10 347 6.17e-16 80.1
MS.gene47733.t1 MTR_1g032490 28.000 275 149 14 90 343 101 347 6.96e-16 79.7
MS.gene47733.t1 MTR_5g464810 25.330 379 215 14 4 343 11 360 1.05e-15 79.3
MS.gene47733.t1 MTR_5g064240 25.330 379 215 14 4 343 11 360 1.05e-15 79.3
MS.gene47733.t1 MTR_5g035560 26.074 326 202 10 6 311 12 318 2.69e-15 78.2
MS.gene47733.t1 MTR_5g072840 22.747 466 291 13 4 424 9 450 2.84e-15 77.8
MS.gene47733.t1 MTR_7g012120 24.395 496 265 20 5 420 16 481 2.88e-15 78.2
MS.gene47733.t1 MTR_1g107315 26.909 275 152 12 90 343 99 345 3.23e-15 77.8
MS.gene47733.t1 MTR_5g072820 24.920 313 193 7 6 300 11 299 4.83e-15 77.0
MS.gene47733.t1 MTR_1g107350 23.935 493 268 22 5 422 8 468 6.01e-15 77.0
MS.gene47733.t1 MTR_2g034990 23.457 324 197 11 5 300 11 311 6.09e-15 77.0
MS.gene47733.t1 MTR_6g038240 22.698 467 287 17 7 423 13 455 6.28e-15 77.0
MS.gene47733.t1 MTR_0036s0220 23.896 385 221 13 6 349 13 366 7.12e-15 76.6
MS.gene47733.t1 MTR_1g062380 21.095 493 301 16 6 424 17 495 8.45e-15 76.6
MS.gene47733.t1 MTR_2g035020 25.152 330 184 14 5 300 11 311 1.06e-14 76.3
MS.gene47733.t1 MTR_1g107365 23.224 366 214 12 5 343 45 370 2.08e-14 75.5
MS.gene47733.t1 MTR_3g479470 24.274 379 224 13 2 343 10 362 2.30e-14 75.1
MS.gene47733.t1 MTR_8g012730 32.026 153 77 3 192 340 54 183 3.12e-14 73.6
MS.gene47733.t1 MTR_8g466240 23.184 358 219 14 3 339 6 328 5.35e-14 73.9
MS.gene47733.t1 MTR_1g107285 22.177 496 278 19 5 427 8 468 6.40e-14 73.9
MS.gene47733.t1 MTR_8g088560 24.923 325 204 11 5 308 10 315 7.96e-14 73.6
MS.gene47733.t1 MTR_3g069690 22.495 489 277 16 2 427 5 454 9.88e-14 73.2
MS.gene47733.t1 MTR_7g080950 24.085 328 210 12 3 311 4 311 1.16e-13 72.8
MS.gene47733.t1 MTR_1g107380 25.333 300 153 10 176 423 193 473 1.23e-13 72.8
MS.gene47733.t1 MTR_8g083290 22.222 486 286 15 6 424 5 465 1.37e-13 72.8
MS.gene47733.t1 MTR_5g072810 23.465 456 295 17 6 422 13 453 1.42e-13 72.8
MS.gene47733.t1 MTR_6g038200 23.824 319 212 10 4 306 10 313 1.52e-13 72.4
MS.gene47733.t1 MTR_3g031400 22.388 469 280 18 4 423 17 450 2.57e-13 72.0
MS.gene47733.t1 MTR_6g038220 25.836 329 196 13 7 309 13 319 2.86e-13 71.6
MS.gene47733.t1 MTR_3g479490 21.739 506 282 19 2 425 3 476 3.09e-13 71.6
MS.gene47733.t1 MTR_5g072830 22.757 457 298 16 4 422 9 448 3.30e-13 71.6
MS.gene47733.t1 MTR_8g012630 40.230 87 49 1 257 340 204 290 4.17e-13 70.9
MS.gene47733.t1 MTR_5g031830 22.614 482 286 19 5 422 12 470 4.70e-13 71.2
MS.gene47733.t1 MTR_5g067170 25.078 319 190 12 8 300 14 309 5.41e-13 70.9
MS.gene47733.t1 MTR_6g014290 24.047 341 205 13 2 303 7 332 5.42e-13 70.9
MS.gene47733.t1 MTR_3g031450 22.889 450 281 14 4 412 17 441 7.09e-13 70.5
MS.gene47733.t1 MTR_0536s0010 22.154 492 275 18 2 420 18 474 9.50e-13 70.1
MS.gene47733.t1 MTR_6g038230 22.609 345 222 10 4 323 10 334 1.03e-12 70.1
MS.gene47733.t1 MTR_5g072860 21.212 462 310 13 5 424 18 467 1.43e-12 69.7
MS.gene47733.t1 MTR_4g485620 23.438 320 194 10 17 304 1 301 2.04e-12 68.9
MS.gene47733.t1 MTR_4g094220 22.969 357 190 13 3 303 5 332 2.77e-12 68.6
MS.gene47733.t1 MTR_6g014220 22.727 484 300 19 2 423 7 478 3.07e-12 68.6
MS.gene47733.t1 MTR_5g066410 25.068 367 189 16 9 340 2 317 3.37e-12 68.2
MS.gene47733.t1 MTR_1g019520 25.463 216 116 4 255 426 2 216 4.37e-12 65.9
MS.gene47733.t1 MTR_1g107375 21.429 364 222 13 5 343 8 332 4.81e-12 67.8
MS.gene47733.t1 MTR_3g008010 23.669 338 208 11 3 303 8 332 5.02e-12 67.8
MS.gene47733.t1 MTR_7g080935 22.462 325 209 10 3 306 9 311 5.48e-12 67.8
MS.gene47733.t1 MTR_3g079480 22.715 383 226 11 2 343 18 371 5.63e-12 67.8
MS.gene47733.t1 MTR_8g007565 25.729 377 197 17 5 340 7 341 6.62e-12 67.4
MS.gene47733.t1 MTR_5g090590 59.184 49 20 0 356 404 6 54 8.50e-12 60.8
MS.gene47733.t1 MTR_7g080900 22.156 334 202 13 2 306 9 313 9.44e-12 67.0
MS.gene47733.t1 MTR_6g014040 22.134 506 279 21 2 423 7 481 9.50e-12 67.0
MS.gene47733.t1 MTR_4g485630 21.158 501 278 19 2 420 6 471 1.13e-11 67.0
MS.gene47733.t1 MTR_5g098960 25.745 369 200 17 1 339 3 327 1.24e-11 66.6
MS.gene47733.t1 MTR_1g029540 22.701 348 218 13 10 340 19 332 1.36e-11 66.6
MS.gene47733.t1 MTR_2g035040 22.957 257 147 9 107 336 14 246 1.88e-11 65.9
MS.gene47733.t1 MTR_7g013200 20.088 453 303 16 9 423 9 440 1.99e-11 65.9
MS.gene47733.t1 MTR_6g014186 22.128 470 284 19 2 423 4 439 2.32e-11 65.9
MS.gene47733.t1 MTR_5g039900 23.925 372 202 11 113 419 125 480 3.32e-11 65.5
MS.gene47733.t1 MTR_6g052375 26.829 205 118 6 143 340 6 185 4.16e-11 64.3
MS.gene47733.t1 MTR_4g128690 21.429 392 236 9 77 422 87 452 4.24e-11 65.1
MS.gene47733.t1 MTR_5g031860 23.077 481 284 19 5 422 12 469 4.32e-11 65.1
MS.gene47733.t1 MTR_8g007650 25.464 377 198 17 5 340 7 341 4.32e-11 65.1
MS.gene47733.t1 MTR_7g011470 26.667 210 128 7 109 303 122 320 6.38e-11 64.3
MS.gene47733.t1 MTR_6g014187 23.009 339 213 13 2 303 7 334 6.89e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47733.t1 AT3G21760 35.510 490 245 10 3 427 2 485 9.91e-90 280
MS.gene47733.t1 AT3G21780 34.855 482 247 9 3 427 2 473 2.36e-86 271
MS.gene47733.t1 AT3G21750 32.917 480 257 7 3 426 2 472 3.20e-86 271
MS.gene47733.t1 AT3G21790 33.742 489 251 10 3 426 2 482 1.87e-84 267
MS.gene47733.t1 AT4G15280 34.792 480 250 11 3 424 2 476 2.44e-81 258
MS.gene47733.t1 AT4G15280 34.792 480 250 11 3 424 34 508 3.85e-81 259
MS.gene47733.t1 AT3G21800 31.911 492 258 11 1 427 1 480 1.99e-74 241
MS.gene47733.t1 AT1G07250 32.784 485 243 13 1 419 2 469 3.30e-72 235
MS.gene47733.t1 AT2G29730 33.056 481 238 13 1 419 1 459 6.14e-69 226
MS.gene47733.t1 AT1G07240 31.667 480 245 12 1 412 1 465 2.99e-65 217
MS.gene47733.t1 AT1G07260 31.006 487 254 13 3 424 4 473 5.45e-63 211
MS.gene47733.t1 AT2G29740 32.854 487 240 17 2 420 5 472 2.05e-62 209
MS.gene47733.t1 AT4G15260 33.333 369 179 8 116 427 1 359 1.29e-60 201
MS.gene47733.t1 AT2G29710 32.712 483 237 17 1 419 1 459 1.38e-58 199
MS.gene47733.t1 AT2G29750 31.762 488 247 17 2 420 5 475 1.36e-55 191
MS.gene47733.t1 AT3G16520 30.199 351 220 9 1 340 1 337 5.75e-39 145
MS.gene47733.t1 AT3G16520 30.199 351 220 9 1 340 1 337 5.81e-39 146
MS.gene47733.t1 AT3G16520 30.199 351 220 9 1 340 1 337 7.37e-39 146
MS.gene47733.t1 AT4G01070 29.944 354 223 10 2 343 5 345 1.54e-37 142
MS.gene47733.t1 AT4G01070 30.028 353 220 11 2 342 5 342 5.42e-37 138
MS.gene47733.t1 AT5G66690 25.261 479 262 20 1 410 3 454 2.12e-34 134
MS.gene47733.t1 AT4G15270 35.185 216 118 6 3 203 2 210 3.09e-34 128
MS.gene47733.t1 AT4G15270 34.821 224 134 6 3 216 2 223 6.40e-34 129
MS.gene47733.t1 AT5G26310 24.689 482 267 18 1 413 3 457 2.56e-31 125
MS.gene47733.t1 AT4G36770 30.347 346 215 11 8 340 7 339 2.93e-31 125
MS.gene47733.t1 AT4G15270 35.437 206 111 6 3 193 2 200 1.02e-30 118
MS.gene47733.t1 AT1G01420 25.163 461 284 12 6 415 9 459 9.08e-30 120
MS.gene47733.t1 AT1G01420 25.163 461 284 12 6 415 12 462 9.08e-30 120
MS.gene47733.t1 AT1G01390 28.116 345 229 9 5 340 8 342 6.19e-29 118
MS.gene47733.t1 AT1G01390 28.116 345 229 9 5 340 25 359 6.82e-29 118
MS.gene47733.t1 AT3G50740 23.602 483 292 17 1 420 3 471 3.97e-27 113
MS.gene47733.t1 AT2G18570 26.479 355 229 11 1 340 1 338 7.13e-27 112
MS.gene47733.t1 AT2G18560 27.731 238 156 7 110 340 20 248 6.48e-18 85.5
MS.gene47733.t1 AT5G12890 22.614 482 291 20 2 416 7 473 2.47e-17 84.3
MS.gene47733.t1 AT2G30150 23.160 462 295 12 6 426 14 456 5.34e-17 83.2
MS.gene47733.t1 AT5G59590 23.517 472 279 20 1 420 6 447 1.16e-16 82.0
MS.gene47733.t1 AT2G15480 22.736 497 281 20 2 420 7 478 1.21e-16 82.4
MS.gene47733.t1 AT2G15480 22.485 507 280 20 2 420 7 488 1.45e-16 82.0
MS.gene47733.t1 AT2G36760 22.178 505 284 20 7 428 16 494 1.74e-16 82.0
MS.gene47733.t1 AT2G30150 22.876 459 294 12 9 426 1 440 2.12e-16 81.3
MS.gene47733.t1 AT2G30140 21.758 455 304 13 6 424 14 452 2.25e-16 81.3
MS.gene47733.t1 AT3G21560 24.855 346 183 14 6 306 13 326 3.35e-16 80.9
MS.gene47733.t1 AT5G59580 23.729 354 227 15 3 343 7 330 6.35e-16 80.1
MS.gene47733.t1 AT2G36750 22.754 501 277 18 7 424 12 485 7.24e-16 80.1
MS.gene47733.t1 AT3G46670 22.833 473 275 22 6 422 10 448 7.69e-16 79.7
MS.gene47733.t1 AT4G34135 23.733 375 218 14 2 340 8 350 1.65e-15 79.0
MS.gene47733.t1 AT3G02100 23.218 491 278 19 1 427 9 464 1.75e-15 78.6
MS.gene47733.t1 AT2G36770 22.334 497 293 22 7 428 16 494 2.63e-15 78.2
MS.gene47733.t1 AT3G46660 22.366 465 295 21 3 422 12 455 2.87e-15 77.8
MS.gene47733.t1 AT3G55700 25.714 280 137 10 193 424 196 452 2.97e-15 77.8
MS.gene47733.t1 AT4G34131 23.705 502 269 21 2 420 7 477 1.00e-14 76.3
MS.gene47733.t1 AT3G55710 24.948 477 279 16 2 424 5 456 1.30e-14 75.9
MS.gene47733.t1 AT1G22400 23.810 357 219 13 2 319 10 352 1.93e-14 75.5
MS.gene47733.t1 AT4G34135 23.754 341 205 13 2 306 8 329 2.57e-14 74.3
MS.gene47733.t1 AT3G53160 23.705 502 280 18 7 428 10 488 2.74e-14 75.1
MS.gene47733.t1 AT1G22380 24.282 383 219 15 2 343 10 362 3.42e-14 74.7
MS.gene47733.t1 AT3G46700 21.656 471 289 18 1 422 5 444 4.98e-14 73.9
MS.gene47733.t1 AT2G15490 22.470 494 281 19 6 420 8 478 6.11e-14 73.9
MS.gene47733.t1 AT2G15490 22.672 494 277 20 6 420 8 475 1.14e-13 73.2
MS.gene47733.t1 AT1G51210 23.269 361 211 13 3 341 18 334 1.57e-13 72.4
MS.gene47733.t1 AT1G78270 25.134 374 216 13 2 338 10 356 2.36e-13 72.0
MS.gene47733.t1 AT2G36780 21.385 491 297 20 7 424 16 490 2.97e-13 72.0
MS.gene47733.t1 AT1G05680 21.988 332 204 11 4 306 5 310 8.31e-13 70.5
MS.gene47733.t1 AT3G11340 23.418 474 277 20 3 424 7 446 1.29e-12 69.7
MS.gene47733.t1 AT2G36800 22.133 497 285 20 7 423 14 488 1.53e-12 69.7
MS.gene47733.t1 AT5G03490 24.161 447 278 18 2 425 16 424 1.63e-12 69.3
MS.gene47733.t1 AT4G15500 26.457 223 145 7 94 303 97 313 3.12e-12 68.6
MS.gene47733.t1 AT1G24100 23.044 473 284 19 3 420 9 456 3.60e-12 68.6
MS.gene47733.t1 AT2G31750 22.062 485 285 21 3 426 6 458 5.69e-12 67.8
MS.gene47733.t1 AT1G73880 23.203 487 279 20 3 424 12 468 5.90e-12 67.8
MS.gene47733.t1 AT2G31790 21.162 482 283 17 2 419 5 453 6.32e-12 67.8
MS.gene47733.t1 AT2G31750 22.385 478 286 20 3 423 6 455 9.24e-12 67.0
MS.gene47733.t1 AT1G05675 21.600 500 253 20 4 419 5 449 1.43e-11 66.6
MS.gene47733.t1 AT5G05870 22.176 478 281 19 5 422 8 454 2.25e-11 65.9
MS.gene47733.t1 AT1G10400 22.680 485 291 21 1 424 3 464 2.69e-11 65.9
MS.gene47733.t1 AT2G16890 21.881 489 283 16 6 426 10 467 3.65e-11 65.5
MS.gene47733.t1 AT3G46650 20.682 469 281 18 3 423 8 433 4.02e-11 65.1
MS.gene47733.t1 AT2G28080 24.399 291 177 11 77 351 97 360 4.85e-11 65.1
MS.gene47733.t1 AT2G43820 21.633 490 274 20 2 425 4 449 9.69e-11 63.9
MS.gene47733.t1 AT4G15490 26.250 240 140 10 85 303 94 317 9.80e-11 63.9

Find 119 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCCTTCGGTTTGGCTTTA+CGG 0.178879 5.3:-72964673 None:intergenic
ACCAACAATGTCCTTGGTTT+TGG 0.186751 5.3:-72964504 None:intergenic
GGATCTTCTTCCAATTATTT+AGG 0.222600 5.3:+72965136 MS.gene47733:CDS
ATTGGTAAACTTGTTAATTC+AGG 0.231524 5.3:-72964446 None:intergenic
TGGAGATGGCGCTAGATTAT+AGG 0.258325 5.3:+72964969 MS.gene47733:CDS
AATTAAACGACCTAAATAAT+TGG 0.261283 5.3:-72965146 None:intergenic
TCTTTATCTTCACACTCTAT+TGG 0.262136 5.3:+72964205 MS.gene47733:CDS
ATCACGGTTGATTAGAAGTT+TGG 0.270104 5.3:-72963838 None:intergenic
GGCCCTACCGGATATATAAT+TGG 0.307388 5.3:-72964464 None:intergenic
TAATTCAGGATGAGAGAAAA+AGG 0.309731 5.3:-72964432 None:intergenic
ACTTCCAGTGTTGCTTTCCT+TGG 0.331322 5.3:+72964176 MS.gene47733:CDS
GAGTAAGAAGACTTTGTTAG+AGG 0.346933 5.3:+72965111 MS.gene47733:CDS
ACAAGATTGAGAAAGGAATA+AGG 0.346991 5.3:+72965032 MS.gene47733:CDS
ACTCAAGGGTGGAAACTAAA+TGG 0.352004 5.3:-72963812 None:intergenic
TGAGTTTGAAGGAAACAAAT+TGG 0.353873 5.3:-72964285 None:intergenic
AGGAAACTGGATTAGTGTTT+GGG 0.354445 5.3:-72963986 None:intergenic
TGCCCTGGCACCCTTCGGTT+TGG 0.357448 5.3:-72964681 None:intergenic
TGATGACTAAAACAGTTATT+CGG 0.369061 5.3:-72963869 None:intergenic
GAGGAAACTGGATTAGTGTT+TGG 0.371137 5.3:-72963987 None:intergenic
TTGGGCCCAGGACTTAATAT+AGG 0.388791 5.3:-72964485 None:intergenic
TGGATAAGGATGGAGAGTTT+AGG 0.391633 5.3:+72965062 MS.gene47733:CDS
GTACGATCTAAGAATCCTTC+AGG 0.396789 5.3:-72964746 None:intergenic
GCGGTCTCTAACCTCATTAC+TGG 0.397084 5.3:+72964053 MS.gene47733:CDS
TCCGAAGTTAAAAGATAGTT+AGG 0.397212 5.3:-72965010 None:intergenic
CGTTTGGTTTCTGAGCTTCA+AGG 0.407371 5.3:-72964022 None:intergenic
AAGCCAAACCGAAGGGTGCC+AGG 0.409877 5.3:+72964678 MS.gene47733:CDS
ATAGTAAGGCCCACTTCATA+TGG 0.415409 5.3:+72964645 MS.gene47733:CDS
GGAGATGGCGCTAGATTATA+GGG 0.416332 5.3:+72964970 MS.gene47733:CDS
TGAGCGGACATGGAGGAAAC+TGG 0.416392 5.3:-72963999 None:intergenic
GGTGCTGCCCTGGCACCCTT+CGG 0.436419 5.3:-72964686 None:intergenic
TTTATCCCTTCTCCTGGTGT+TGG 0.439627 5.3:+72963789 MS.gene47733:CDS
TGAATTTACTATGATTCCAT+TGG 0.441461 5.3:-72964378 None:intergenic
AGCTTCAAGGTGAGCGGACA+TGG 0.443539 5.3:-72964009 None:intergenic
AATAAGGAGTGTGTTGGATA+AGG 0.445356 5.3:+72965048 MS.gene47733:CDS
CGCTTTCTTCTCCAGTAATG+AGG 0.445498 5.3:-72964064 None:intergenic
ACTTCGGACAAGATTGAGAA+AGG 0.447026 5.3:+72965025 MS.gene47733:CDS
TGTAGGGATGGAGAACTCTT+TGG 0.448555 5.3:-72964141 None:intergenic
GAGACCGCTTGTTTGACGTT+TGG 0.450452 5.3:-72964038 None:intergenic
TTAGATCGTACGGCAGAGAT+TGG 0.453842 5.3:+72964758 MS.gene47733:CDS
AGGAGTGTGTTGGATAAGGA+TGG 0.460546 5.3:+72965052 MS.gene47733:CDS
GAAGAAGACGAGTGTAGGGA+TGG 0.467348 5.3:-72964153 None:intergenic
CCCAAAACCAAGGACATTGT+TGG 0.469361 5.3:+72964503 MS.gene47733:CDS
AAGTTTACCAATTATATATC+CGG 0.470055 5.3:+72964457 MS.gene47733:CDS
GTAGGGCCTATATTAAGTCC+TGG 0.471587 5.3:+72964479 MS.gene47733:CDS
ATCAGAACCAACAATGTCCT+TGG 0.474274 5.3:-72964510 None:intergenic
GAAACAAATTGGCGAAAGTC+GGG 0.478141 5.3:-72964274 None:intergenic
TTCCGTGATAAGCAAGGAAT+GGG 0.480902 5.3:+72964316 MS.gene47733:CDS
CTCTTTGGCAACATCAATCA+TGG 0.482802 5.3:-72964126 None:intergenic
GTAATCAGAAGGTGCTGCCC+TGG 0.491269 5.3:-72964696 None:intergenic
GTGGTGTTTATCCCTTCTCC+TGG 0.491408 5.3:+72963783 MS.gene47733:CDS
AACATCAATCATGGCTGTGC+AGG 0.498010 5.3:-72964117 None:intergenic
ACGTGGAGTGAATCGGAGAT+TGG 0.500548 5.3:-72963936 None:intergenic
GTTGATGACGTGGAGTGAAT+CGG 0.512840 5.3:-72963943 None:intergenic
GGAAACAAATTGGCGAAAGT+CGG 0.515501 5.3:-72964275 None:intergenic
TTCCCATTCCTTGCTTATCA+CGG 0.515871 5.3:-72964318 None:intergenic
GGAGTGAATCGGAGATTGGA+AGG 0.517110 5.3:-72963932 None:intergenic
ATCGTACGGCAGAGATTGGT+AGG 0.520949 5.3:+72964762 MS.gene47733:CDS
AGTAAGAAGACTTTGTTAGA+GGG 0.524588 5.3:+72965112 MS.gene47733:CDS
TAAACCAAGGAAAGCAACAC+TGG 0.526501 5.3:-72964180 None:intergenic
GAAGTGAAGAAGACGAGTGT+AGG 0.527981 5.3:-72964158 None:intergenic
GATAAGCAAGGAATGGGAAT+CGG 0.533282 5.3:+72964322 MS.gene47733:CDS
GAACGAGGCAATGAGTTTGA+AGG 0.535895 5.3:-72964296 None:intergenic
GGACAATTTAATTTGATACC+TGG 0.537015 5.3:-72965183 None:intergenic
AATTGATTATATTATGAACC+AGG 0.537333 5.3:+72965165 MS.gene47733:CDS
TTAGAAGTTTGGAGAACTCA+AGG 0.537547 5.3:-72963827 None:intergenic
AAGTGAAGAAGACGAGTGTA+GGG 0.541815 5.3:-72964157 None:intergenic
TTTCTTTGCTTCGGAAGCAA+AGG 0.548408 5.3:+72964575 MS.gene47733:CDS
TGATGATCAACCTCTTTCCT+CGG 0.551057 5.3:+72964547 MS.gene47733:CDS
CAACATGAAGAAAGCAGAAG+TGG 0.556390 5.3:+72963764 None:intergenic
ATGTGCTATTGAGAATAGTA+AGG 0.556934 5.3:+72964631 MS.gene47733:CDS
TGATTCCATTGGCATTCTTG+AGG 0.559036 5.3:-72964367 None:intergenic
GTTCCGTGATAAGCAAGGAA+TGG 0.559658 5.3:+72964315 MS.gene47733:CDS
TACCAATTATATATCCGGTA+GGG 0.560017 5.3:+72964462 MS.gene47733:CDS
GAAAGGAATAAGGAGTGTGT+TGG 0.560047 5.3:+72965042 MS.gene47733:CDS
TATAGGGTGGAGTATAGTAG+TGG 0.560919 5.3:+72964986 MS.gene47733:CDS
TTATTCGGAGACGGCTATCA+CGG 0.561361 5.3:-72963854 None:intergenic
TGAAGGATTCTTAGATCGTA+CGG 0.567665 5.3:+72964748 MS.gene47733:CDS
AGTGTATACATCAATTTCAG+TGG 0.569138 5.3:-72963904 None:intergenic
AAATGGCCAACACCAGGAGA+AGG 0.569712 5.3:-72963795 None:intergenic
TAGGGCCTATATTAAGTCCT+GGG 0.571282 5.3:+72964480 MS.gene47733:CDS
AAGAAGACTTTGTTAGAGGG+AGG 0.577907 5.3:+72965115 MS.gene47733:CDS
CATCAATTTCAGTGGCGTGT+GGG 0.579168 5.3:-72963896 None:intergenic
ACATCAATTTCAGTGGCGTG+TGG 0.581929 5.3:-72963897 None:intergenic
GGACTTAATATAGGCCCTAC+CGG 0.582299 5.3:-72964476 None:intergenic
AGAGGCCTCAAGAATGCCAA+TGG 0.583250 5.3:+72964362 MS.gene47733:CDS
TTACCAATTATATATCCGGT+AGG 0.583472 5.3:+72964461 MS.gene47733:CDS
TCCTTGCTTATCACGGAACG+AGG 0.593670 5.3:-72964311 None:intergenic
TCAGAAAGAGTGTAATCAGA+AGG 0.599938 5.3:-72964707 None:intergenic
CAAATTGGCGAAAGTCGGGA+TGG 0.601417 5.3:-72964270 None:intergenic
GCTGAAGATTTCTGTGGAGA+TGG 0.601946 5.3:+72964955 MS.gene47733:CDS
GCCTCGTTCCGTGATAAGCA+AGG 0.603002 5.3:+72964310 MS.gene47733:CDS
CTCCGTAAAGCCAAACCGAA+GGG 0.609884 5.3:+72964671 MS.gene47733:CDS
GAAACTAAATGGCCAACACC+AGG 0.609913 5.3:-72963801 None:intergenic
TCTCCGTAAAGCCAAACCGA+AGG 0.610953 5.3:+72964670 MS.gene47733:CDS
ATAGGGTGGAGTATAGTAGT+GGG 0.611371 5.3:+72964987 MS.gene47733:CDS
TACGGAGAGACCATATGAAG+TGG 0.611492 5.3:-72964655 None:intergenic
CTAAAACAGTTATTCGGAGA+CGG 0.612457 5.3:-72963863 None:intergenic
AGCCAAACCGAAGGGTGCCA+GGG 0.615709 5.3:+72964679 MS.gene47733:CDS
AATGGCCAACACCAGGAGAA+GGG 0.617006 5.3:-72963794 None:intergenic
TTTCTGAGCTTCAAGGTGAG+CGG 0.618759 5.3:-72964015 None:intergenic
TAGAAGTTTGGAGAACTCAA+GGG 0.623877 5.3:-72963826 None:intergenic
GAAACCAAACGTCAAACAAG+CGG 0.624187 5.3:+72964034 MS.gene47733:CDS
GAGTGAATCGGAGATTGGAA+GGG 0.632511 5.3:-72963931 None:intergenic
TTGGTTCTGATATCATCAAG+TGG 0.633590 5.3:+72964522 MS.gene47733:CDS
GGGGAAGAGAGCATTCTGGA+AGG 0.637308 5.3:-72963965 None:intergenic
AAGTTTGGAGAACTCAAGGG+TGG 0.640566 5.3:-72963823 None:intergenic
AAGTCCTGGGCCCAAAACCA+AGG 0.642512 5.3:+72964493 MS.gene47733:CDS
CTCATTACTGGAGAAGAAAG+CGG 0.645834 5.3:+72964065 MS.gene47733:CDS
GGAAACTGGATTAGTGTTTG+GGG 0.647513 5.3:-72963985 None:intergenic
ACGGAGAGACCATATGAAGT+GGG 0.653972 5.3:-72964654 None:intergenic
TCGTACGGCAGAGATTGGTA+GGG 0.661388 5.3:+72964763 MS.gene47733:CDS
GAAGATAAAGAGTTAAACCA+AGG 0.675239 5.3:-72964193 None:intergenic
GTGTGAGCTGAAGATTTCTG+TGG 0.682222 5.3:+72964949 MS.gene47733:CDS
GAAACTGGATTAGTGTTTGG+GGG 0.689284 5.3:-72963984 None:intergenic
ATTCTGGAAGGTTGATGACG+TGG 0.705319 5.3:-72963953 None:intergenic
TTCAAGGTGAGCGGACATGG+AGG 0.708771 5.3:-72964006 None:intergenic
GATGGCGCTAGATTATAGGG+TGG 0.734904 5.3:+72964973 MS.gene47733:CDS
TGTCAACAACGAAAGCAGTG+AGG 0.756171 5.3:-72964091 None:intergenic
TGAAGATCTAGAATCCCATG+CGG 0.765636 5.3:+72964403 MS.gene47733:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTTACCAATTATATATC+CGG + chr5.3:72964457-72964476 MS.gene47733:CDS 20.0%
!! AATTAAACGACCTAAATAAT+TGG - chr5.3:72965149-72965168 None:intergenic 20.0%
!! AATTGATTATATTATGAACC+AGG + chr5.3:72965165-72965184 MS.gene47733:CDS 20.0%
! TGAATTTACTATGATTCCAT+TGG - chr5.3:72964381-72964400 None:intergenic 25.0%
! TGATGACTAAAACAGTTATT+CGG - chr5.3:72963872-72963891 None:intergenic 25.0%
!!! ATTGGTAAACTTGTTAATTC+AGG - chr5.3:72964449-72964468 None:intergenic 25.0%
ACAAGATTGAGAAAGGAATA+AGG + chr5.3:72965032-72965051 MS.gene47733:CDS 30.0%
AGTAAGAAGACTTTGTTAGA+GGG + chr5.3:72965112-72965131 MS.gene47733:CDS 30.0%
AGTGTATACATCAATTTCAG+TGG - chr5.3:72963907-72963926 None:intergenic 30.0%
GAAGATAAAGAGTTAAACCA+AGG - chr5.3:72964196-72964215 None:intergenic 30.0%
GGATCTTCTTCCAATTATTT+AGG + chr5.3:72965136-72965155 MS.gene47733:CDS 30.0%
TAATTCAGGATGAGAGAAAA+AGG - chr5.3:72964435-72964454 None:intergenic 30.0%
TACCAATTATATATCCGGTA+GGG + chr5.3:72964462-72964481 MS.gene47733:CDS 30.0%
TCCGAAGTTAAAAGATAGTT+AGG - chr5.3:72965013-72965032 None:intergenic 30.0%
TCTTTATCTTCACACTCTAT+TGG + chr5.3:72964205-72964224 MS.gene47733:CDS 30.0%
TGAGTTTGAAGGAAACAAAT+TGG - chr5.3:72964288-72964307 None:intergenic 30.0%
TTACCAATTATATATCCGGT+AGG + chr5.3:72964461-72964480 MS.gene47733:CDS 30.0%
! ATGTGCTATTGAGAATAGTA+AGG + chr5.3:72964631-72964650 MS.gene47733:CDS 30.0%
!!! GCCTAACTATCTTTTAACTT+CGG + chr5.3:72965009-72965028 MS.gene47733:CDS 30.0%
ATCACGGTTGATTAGAAGTT+TGG - chr5.3:72963841-72963860 None:intergenic 35.0%
CTAAAACAGTTATTCGGAGA+CGG - chr5.3:72963866-72963885 None:intergenic 35.0%
GAGTAAGAAGACTTTGTTAG+AGG + chr5.3:72965111-72965130 MS.gene47733:CDS 35.0%
TAGAAGTTTGGAGAACTCAA+GGG - chr5.3:72963829-72963848 None:intergenic 35.0%
TGAAGGATTCTTAGATCGTA+CGG + chr5.3:72964748-72964767 MS.gene47733:CDS 35.0%
TTAGAAGTTTGGAGAACTCA+AGG - chr5.3:72963830-72963849 None:intergenic 35.0%
! AATAAGGAGTGTGTTGGATA+AGG + chr5.3:72965048-72965067 MS.gene47733:CDS 35.0%
! GATTTGTTTCACATTGTGGT+TGG + chr5.3:72964837-72964856 MS.gene47733:intron 35.0%
! TCAGAAAGAGTGTAATCAGA+AGG - chr5.3:72964710-72964729 None:intergenic 35.0%
! TCGGTAGTTTTTCTTTGCTT+CGG + chr5.3:72964566-72964585 MS.gene47733:CDS 35.0%
! TTGTGTTCGATTTTACCTGA+AGG + chr5.3:72964731-72964750 MS.gene47733:CDS 35.0%
!! ACAGGTTACTGCTTTTGAAT+TGG + chr5.3:72964925-72964944 MS.gene47733:intron 35.0%
!! AGGAAACTGGATTAGTGTTT+GGG - chr5.3:72963989-72964008 None:intergenic 35.0%
!! TTGGTTCTGATATCATCAAG+TGG + chr5.3:72964522-72964541 MS.gene47733:CDS 35.0%
!!! AAGCAAAGGTTGTTTTGATG+AGG + chr5.3:72964589-72964608 MS.gene47733:CDS 35.0%
AAAGTATATGCTCTCGAGTG+TGG - chr5.3:72964867-72964886 None:intergenic 40.0%
AAGAAGACTTTGTTAGAGGG+AGG + chr5.3:72965115-72965134 MS.gene47733:CDS 40.0%
AAGTGAAGAAGACGAGTGTA+GGG - chr5.3:72964160-72964179 None:intergenic 40.0%
ACTCAAGGGTGGAAACTAAA+TGG - chr5.3:72963815-72963834 None:intergenic 40.0%
ACTTCGGACAAGATTGAGAA+AGG + chr5.3:72965025-72965044 MS.gene47733:CDS 40.0%
AGAAAAACTACCGAGGAAAG+AGG - chr5.3:72964560-72964579 None:intergenic 40.0%
ATAGGGTGGAGTATAGTAGT+GGG + chr5.3:72964987-72965006 MS.gene47733:CDS 40.0%
ATAGTAAGGCCCACTTCATA+TGG + chr5.3:72964645-72964664 MS.gene47733:CDS 40.0%
ATCAGAACCAACAATGTCCT+TGG - chr5.3:72964513-72964532 None:intergenic 40.0%
ATGTGAAACAAATCCTCCTG+TGG - chr5.3:72964831-72964850 None:intergenic 40.0%
CTCATTACTGGAGAAGAAAG+CGG + chr5.3:72964065-72964084 MS.gene47733:CDS 40.0%
CTCTTTGGCAACATCAATCA+TGG - chr5.3:72964129-72964148 None:intergenic 40.0%
GAAACAAATTGGCGAAAGTC+GGG - chr5.3:72964277-72964296 None:intergenic 40.0%
GAAACCAAACGTCAAACAAG+CGG + chr5.3:72964034-72964053 MS.gene47733:CDS 40.0%
GAAGCAAAGAAAAACTACCG+AGG - chr5.3:72964567-72964586 None:intergenic 40.0%
GATAAGCAAGGAATGGGAAT+CGG + chr5.3:72964322-72964341 MS.gene47733:CDS 40.0%
GGAAACAAATTGGCGAAAGT+CGG - chr5.3:72964278-72964297 None:intergenic 40.0%
GTACGATCTAAGAATCCTTC+AGG - chr5.3:72964749-72964768 None:intergenic 40.0%
TAAACCAAGGAAAGCAACAC+TGG - chr5.3:72964183-72964202 None:intergenic 40.0%
TAGGGCCTATATTAAGTCCT+GGG + chr5.3:72964480-72964499 MS.gene47733:CDS 40.0%
TATAGGGTGGAGTATAGTAG+TGG + chr5.3:72964986-72965005 MS.gene47733:CDS 40.0%
TGATGATCAACCTCTTTCCT+CGG + chr5.3:72964547-72964566 MS.gene47733:CDS 40.0%
TGATTCCATTGGCATTCTTG+AGG - chr5.3:72964370-72964389 None:intergenic 40.0%
TGGATAAGGATGGAGAGTTT+AGG + chr5.3:72965062-72965081 MS.gene47733:CDS 40.0%
TTCCCATTCCTTGCTTATCA+CGG - chr5.3:72964321-72964340 None:intergenic 40.0%
TTCCGTGATAAGCAAGGAAT+GGG + chr5.3:72964316-72964335 MS.gene47733:CDS 40.0%
TTTCTTTGCTTCGGAAGCAA+AGG + chr5.3:72964575-72964594 MS.gene47733:CDS 40.0%
! ACACTCGAGAGCATATACTT+TGG + chr5.3:72964866-72964885 MS.gene47733:intron 40.0%
! ACCAACAATGTCCTTGGTTT+TGG - chr5.3:72964507-72964526 None:intergenic 40.0%
! GAAAGGAATAAGGAGTGTGT+TGG + chr5.3:72965042-72965061 MS.gene47733:CDS 40.0%
! GGAGGATTTGTTTCACATTG+TGG + chr5.3:72964833-72964852 MS.gene47733:intron 40.0%
! TGAAGATCTAGAATCCCATG+CGG + chr5.3:72964403-72964422 MS.gene47733:CDS 40.0%
!! CCAACAATGTCCTTGGTTTT+GGG - chr5.3:72964506-72964525 None:intergenic 40.0%
!! GAAACTGGATTAGTGTTTGG+GGG - chr5.3:72963987-72964006 None:intergenic 40.0%
!! GAGGAAACTGGATTAGTGTT+TGG - chr5.3:72963990-72964009 None:intergenic 40.0%
!! GGAAACTGGATTAGTGTTTG+GGG - chr5.3:72963988-72964007 None:intergenic 40.0%
!! GTTTTCAAGAGCTATGCAAG+AGG + chr5.3:72964344-72964363 MS.gene47733:CDS 40.0%
!!! AGGTTGTTTTGATGAGGATC+AGG + chr5.3:72964595-72964614 MS.gene47733:CDS 40.0%
AACATCAATCATGGCTGTGC+AGG - chr5.3:72964120-72964139 None:intergenic 45.0%
AAGTTTGGAGAACTCAAGGG+TGG - chr5.3:72963826-72963845 None:intergenic 45.0%
ACATCAATTTCAGTGGCGTG+TGG - chr5.3:72963900-72963919 None:intergenic 45.0%
ACGGAGAGACCATATGAAGT+GGG - chr5.3:72964657-72964676 None:intergenic 45.0%
AGAAAAAGGAGTGAACCGCA+TGG - chr5.3:72964421-72964440 None:intergenic 45.0%
AGATTGGTAGGGTGATTGGT+TGG + chr5.3:72964774-72964793 MS.gene47733:intron 45.0%
CATCAATTTCAGTGGCGTGT+GGG - chr5.3:72963899-72963918 None:intergenic 45.0%
CCCAAAACCAAGGACATTGT+TGG + chr5.3:72964503-72964522 MS.gene47733:CDS 45.0%
CGCTTTCTTCTCCAGTAATG+AGG - chr5.3:72964067-72964086 None:intergenic 45.0%
GAAAAAGGAGTGAACCGCAT+GGG - chr5.3:72964420-72964439 None:intergenic 45.0%
GAAACTAAATGGCCAACACC+AGG - chr5.3:72963804-72963823 None:intergenic 45.0%
GAACGAGGCAATGAGTTTGA+AGG - chr5.3:72964299-72964318 None:intergenic 45.0%
GAAGTGAAGAAGACGAGTGT+AGG - chr5.3:72964161-72964180 None:intergenic 45.0%
GAGTGAATCGGAGATTGGAA+GGG - chr5.3:72963934-72963953 None:intergenic 45.0%
GCTGAAGATTTCTGTGGAGA+TGG + chr5.3:72964955-72964974 MS.gene47733:CDS 45.0%
GGACTTAATATAGGCCCTAC+CGG - chr5.3:72964479-72964498 None:intergenic 45.0%
GGAGATGGCGCTAGATTATA+GGG + chr5.3:72964970-72964989 MS.gene47733:CDS 45.0%
GGCCCTACCGGATATATAAT+TGG - chr5.3:72964467-72964486 None:intergenic 45.0%
GTAGGGCCTATATTAAGTCC+TGG + chr5.3:72964479-72964498 MS.gene47733:CDS 45.0%
GTGTGAGCTGAAGATTTCTG+TGG + chr5.3:72964949-72964968 MS.gene47733:CDS 45.0%
GTTCCGTGATAAGCAAGGAA+TGG + chr5.3:72964315-72964334 MS.gene47733:CDS 45.0%
TACGGAGAGACCATATGAAG+TGG - chr5.3:72964658-72964677 None:intergenic 45.0%
TGGAGATGGCGCTAGATTAT+AGG + chr5.3:72964969-72964988 MS.gene47733:CDS 45.0%
TGTAGGGATGGAGAACTCTT+TGG - chr5.3:72964144-72964163 None:intergenic 45.0%
TGTCAACAACGAAAGCAGTG+AGG - chr5.3:72964094-72964113 None:intergenic 45.0%
TTAGATCGTACGGCAGAGAT+TGG + chr5.3:72964758-72964777 MS.gene47733:CDS 45.0%
TTATTCGGAGACGGCTATCA+CGG - chr5.3:72963857-72963876 None:intergenic 45.0%
TTGGGCCCAGGACTTAATAT+AGG - chr5.3:72964488-72964507 None:intergenic 45.0%
TTTATCCCTTCTCCTGGTGT+TGG + chr5.3:72963789-72963808 MS.gene47733:CDS 45.0%
TTTCTGAGCTTCAAGGTGAG+CGG - chr5.3:72964018-72964037 None:intergenic 45.0%
! AGGAGTGTGTTGGATAAGGA+TGG + chr5.3:72965052-72965071 MS.gene47733:CDS 45.0%
! CGTTTGGTTTCTGAGCTTCA+AGG - chr5.3:72964025-72964044 None:intergenic 45.0%
! GATTGGTAGGGTGATTGGTT+GGG + chr5.3:72964775-72964794 MS.gene47733:intron 45.0%
! GGCTAGTATTTGGGTTTGTG+GGG - chr5.3:72964801-72964820 None:intergenic 45.0%
! GGGCTAGTATTTGGGTTTGT+GGG - chr5.3:72964802-72964821 None:intergenic 45.0%
!! ACTTCCAGTGTTGCTTTCCT+TGG + chr5.3:72964176-72964195 MS.gene47733:CDS 45.0%
!! ATTCTGGAAGGTTGATGACG+TGG - chr5.3:72963956-72963975 None:intergenic 45.0%
!! GTTGATGACGTGGAGTGAAT+CGG - chr5.3:72963946-72963965 None:intergenic 45.0%
!! TGGGCTAGTATTTGGGTTTG+TGG - chr5.3:72964803-72964822 None:intergenic 45.0%
AAAGAGCGGCCATGTTGCTA+CGG - chr5.3:72964897-72964916 None:intergenic 50.0%
AAATCCTCCTGTGGCTGGAT+GGG - chr5.3:72964822-72964841 None:intergenic 50.0%
AAATGGCCAACACCAGGAGA+AGG - chr5.3:72963798-72963817 None:intergenic 50.0%
AATGGCCAACACCAGGAGAA+GGG - chr5.3:72963797-72963816 None:intergenic 50.0%
ACCTGTTGCTCAGCAAAGAG+CGG - chr5.3:72964911-72964930 None:intergenic 50.0%
ACGTGGAGTGAATCGGAGAT+TGG - chr5.3:72963939-72963958 None:intergenic 50.0%
AGAGGCCTCAAGAATGCCAA+TGG + chr5.3:72964362-72964381 MS.gene47733:CDS 50.0%
ATCGTACGGCAGAGATTGGT+AGG + chr5.3:72964762-72964781 MS.gene47733:CDS 50.0%
CAAATTGGCGAAAGTCGGGA+TGG - chr5.3:72964273-72964292 None:intergenic 50.0%
CTCCGTAAAGCCAAACCGAA+GGG + chr5.3:72964671-72964690 MS.gene47733:CDS 50.0%
GAAACAAATCCTCCTGTGGC+TGG - chr5.3:72964827-72964846 None:intergenic 50.0%
GAAGAAGACGAGTGTAGGGA+TGG - chr5.3:72964156-72964175 None:intergenic 50.0%
GAGACCGCTTGTTTGACGTT+TGG - chr5.3:72964041-72964060 None:intergenic 50.0%
GATGGCGCTAGATTATAGGG+TGG + chr5.3:72964973-72964992 MS.gene47733:CDS 50.0%
GCAGAGATTGGTAGGGTGAT+TGG + chr5.3:72964770-72964789 MS.gene47733:intron 50.0%
GCGGTCTCTAACCTCATTAC+TGG + chr5.3:72964053-72964072 MS.gene47733:CDS 50.0%
GGAGTGAATCGGAGATTGGA+AGG - chr5.3:72963935-72963954 None:intergenic 50.0%
GTGGTGTTTATCCCTTCTCC+TGG + chr5.3:72963783-72963802 MS.gene47733:CDS 50.0%
TCCTTGCTTATCACGGAACG+AGG - chr5.3:72964314-72964333 None:intergenic 50.0%
TCGTACGGCAGAGATTGGTA+GGG + chr5.3:72964763-72964782 MS.gene47733:CDS 50.0%
TCTCCGTAAAGCCAAACCGA+AGG + chr5.3:72964670-72964689 MS.gene47733:CDS 50.0%
!! CACCCTTCGGTTTGGCTTTA+CGG - chr5.3:72964676-72964695 None:intergenic 50.0%
!! GGCTGGATGGGCTAGTATTT+GGG - chr5.3:72964810-72964829 None:intergenic 50.0%
!! TGGCTGGATGGGCTAGTATT+TGG - chr5.3:72964811-72964830 None:intergenic 50.0%
!! TTTGGGGGAAGAGAGCATTC+TGG - chr5.3:72963972-72963991 None:intergenic 50.0%
AAGAGCGGCCATGTTGCTAC+GGG - chr5.3:72964896-72964915 None:intergenic 55.0%
AAGTCCTGGGCCCAAAACCA+AGG + chr5.3:72964493-72964512 MS.gene47733:CDS 55.0%
AGCTTCAAGGTGAGCGGACA+TGG - chr5.3:72964012-72964031 None:intergenic 55.0%
ATACTAGCCCATCCAGCCAC+AGG + chr5.3:72964812-72964831 MS.gene47733:intron 55.0%
CAAATCCTCCTGTGGCTGGA+TGG - chr5.3:72964823-72964842 None:intergenic 55.0%
GCCTCGTTCCGTGATAAGCA+AGG + chr5.3:72964310-72964329 MS.gene47733:CDS 55.0%
TGAGCGGACATGGAGGAAAC+TGG - chr5.3:72964002-72964021 None:intergenic 55.0%
TTCAAGGTGAGCGGACATGG+AGG - chr5.3:72964009-72964028 None:intergenic 55.0%
TTGGTGTGCCCGTAGCAACA+TGG + chr5.3:72964885-72964904 MS.gene47733:intron 55.0%
!! GGGGAAGAGAGCATTCTGGA+AGG - chr5.3:72963968-72963987 None:intergenic 55.0%
!! GTAATCAGAAGGTGCTGCCC+TGG - chr5.3:72964699-72964718 None:intergenic 55.0%
!!! ATGTCCTTGGTTTTGGGCCC+AGG - chr5.3:72964500-72964519 None:intergenic 55.0%
GCCGCTCTTTGCTGAGCAAC+AGG + chr5.3:72964907-72964926 MS.gene47733:intron 60.0%
!! AAGCCAAACCGAAGGGTGCC+AGG + chr5.3:72964678-72964697 MS.gene47733:CDS 60.0%
!! AGCCAAACCGAAGGGTGCCA+GGG + chr5.3:72964679-72964698 MS.gene47733:CDS 60.0%
CTAGCCCATCCAGCCACAGG+AGG + chr5.3:72964815-72964834 MS.gene47733:intron 65.0%
TGCCCTGGCACCCTTCGGTT+TGG - chr5.3:72964684-72964703 None:intergenic 65.0%
! GGTGCTGCCCTGGCACCCTT+CGG - chr5.3:72964689-72964708 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 72963768 72965198 72963768 ID=MS.gene47733
chr5.3 mRNA 72963768 72965198 72963768 ID=MS.gene47733.t1;Parent=MS.gene47733
chr5.3 exon 72963768 72964784 72963768 ID=MS.gene47733.t1.exon1;Parent=MS.gene47733.t1
chr5.3 CDS 72963768 72964784 72963768 ID=cds.MS.gene47733.t1;Parent=MS.gene47733.t1
chr5.3 exon 72964929 72965198 72964929 ID=MS.gene47733.t1.exon2;Parent=MS.gene47733.t1
chr5.3 CDS 72964929 72965198 72964929 ID=cds.MS.gene47733.t1;Parent=MS.gene47733.t1
Gene Sequence

>MS.gene47733

ATGAAGAAAGCAGAAGTGGTGTTTATCCCTTCTCCTGGTGTTGGCCATTTAGTTTCCACCCTTGAGTTCTCCAAACTTCTAATCAACCGTGATAGCCGTCTCCGAATAACTGTTTTAGTCATCAAATTCCCACACGCCACTGAAATTGATGTATACACTAAATCCCTTCCAATCTCCGATTCACTCCACGTCATCAACCTTCCAGAATGCTCTCTTCCCCCAAACACTAATCCAGTTTCCTCCATGTCCGCTCACCTTGAAGCTCAGAAACCAAACGTCAAACAAGCGGTCTCTAACCTCATTACTGGAGAAGAAAGCGGAGTCCTCACTGCTTTCGTTGTTGACATGTCCTGCACAGCCATGATTGATGTTGCCAAAGAGTTCTCCATCCCTACACTCGTCTTCTTCACTTCCAGTGTTGCTTTCCTTGGTTTAACTCTTTATCTTCACACTCTATTGGAACGAGTAGATTCAACTCAGTTGCTGCAGCAGAACGAGTTAGCCATCCCGACTTTCGCCAATTTGTTTCCTTCAAACTCATTGCCTCGTTCCGTGATAAGCAAGGAATGGGAATCGGTTTTCAAGAGCTATGCAAGAGGCCTCAAGAATGCCAATGGAATCATAGTAAATTCATTTGAAGATCTAGAATCCCATGCGGTTCACTCCTTTTTCTCTCATCCTGAATTAACAAGTTTACCAATTATATATCCGGTAGGGCCTATATTAAGTCCTGGGCCCAAAACCAAGGACATTGTTGGTTCTGATATCATCAAGTGGCTTGATGATCAACCTCTTTCCTCGGTAGTTTTTCTTTGCTTCGGAAGCAAAGGTTGTTTTGATGAGGATCAGGTTAATGAGATCGCATGTGCTATTGAGAATAGTAAGGCCCACTTCATATGGTCTCTCCGTAAAGCCAAACCGAAGGGTGCCAGGGCAGCACCTTCTGATTACACTCTTTCTGATTTGTGTTCGATTTTACCTGAAGGATTCTTAGATCGTACGGCAGAGATTGGTAGGGTGATTGGTTGGGCCCCACAAACCCAAATACTAGCCCATCCAGCCACAGGAGGATTTGTTTCACATTGTGGTTGGAATTCCACACTCGAGAGCATATACTTTGGTGTGCCCGTAGCAACATGGCCGCTCTTTGCTGAGCAACAGGTTACTGCTTTTGAATTGGTGTGTGAGCTGAAGATTTCTGTGGAGATGGCGCTAGATTATAGGGTGGAGTATAGTAGTGGGCCTAACTATCTTTTAACTTCGGACAAGATTGAGAAAGGAATAAGGAGTGTGTTGGATAAGGATGGAGAGTTTAGGAAAAAAGTGAAAGAGATGAGTGAAAAGAGTAAGAAGACTTTGTTAGAGGGAGGATCTTCTTCCAATTATTTAGGTCGTTTAATTGATTATATTATGAACCAGGTATCAAATTAA
Protein sequence

>MS.gene47733.t1

MKKAEVVFIPSPGVGHLVSTLEFSKLLINRDSRLRITVLVIKFPHATEIDVYTKSLPISDSLHVINLPECSLPPNTNPVSSMSAHLEAQKPNVKQAVSNLITGEESGVLTAFVVDMSCTAMIDVAKEFSIPTLVFFTSSVAFLGLTLYLHTLLERVDSTQLLQQNELAIPTFANLFPSNSLPRSVISKEWESVFKSYARGLKNANGIIVNSFEDLESHAVHSFFSHPELTSLPIIYPVGPILSPGPKTKDIVGSDIIKWLDDQPLSSVVFLCFGSKGCFDEDQVNEIACAIENSKAHFIWSLRKAKPKGARAAPSDYTLSDLCSILPEGFLDRTAEIGRVTAFELVCELKISVEMALDYRVEYSSGPNYLLTSDKIEKGIRSVLDKDGEFRKKVKEMSEKSKKTLLEGGSSSNYLGRLIDYIMNQVSN