AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038256

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038256.t1 MTR_5g090580 94.979 478 24 0 1 478 1 478 0.0 935
MS.gene038256.t1 MTR_5g090670 78.794 481 98 2 1 478 1 480 0.0 773
MS.gene038256.t1 MTR_5g090600 79.707 478 76 4 1 478 1 457 0.0 771
MS.gene038256.t1 MTR_5g090620 77.292 480 106 3 1 478 1 479 0.0 758
MS.gene038256.t1 MTR_5g090700 77.593 482 102 5 1 478 1 480 0.0 745
MS.gene038256.t1 MTR_5g090660 76.360 478 109 4 1 477 1 475 0.0 738
MS.gene038256.t1 MTR_5g090630 77.453 479 97 4 1 478 1 469 0.0 738
MS.gene038256.t1 MTR_5g090610 74.948 479 104 5 1 478 1 464 0.0 712
MS.gene038256.t1 MTR_5g098930 66.805 482 145 7 1 478 1 471 0.0 631
MS.gene038256.t1 MTR_5g090690 59.806 413 101 5 65 468 18 374 1.22e-149 432
MS.gene038256.t1 MTR_5g090650 64.873 353 89 6 1 352 1 319 5.87e-148 425
MS.gene038256.t1 MTR_5g070040 41.803 488 242 16 2 475 8 467 7.12e-119 357
MS.gene038256.t1 MTR_2g046820 42.916 487 236 13 1 472 1 460 4.94e-116 349
MS.gene038256.t1 MTR_2g040530 42.029 483 248 11 1 472 1 462 2.01e-114 345
MS.gene038256.t1 MTR_2g046750 41.068 487 248 14 1 472 1 463 3.92e-112 339
MS.gene038256.t1 MTR_5g070090 41.443 485 241 15 2 474 8 461 5.86e-111 336
MS.gene038256.t1 MTR_3g009510 33.198 494 288 16 1 472 1 474 1.31e-82 263
MS.gene038256.t1 MTR_6g488280 34.029 479 283 14 3 470 4 460 3.87e-74 241
MS.gene038256.t1 MTR_0428s0010 34.029 479 283 14 3 470 4 460 3.87e-74 241
MS.gene038256.t1 MTR_6g023665 35.417 480 277 15 2 470 10 467 5.42e-74 241
MS.gene038256.t1 MTR_8g465670 33.539 486 285 14 2 471 4 467 1.50e-73 240
MS.gene038256.t1 MTR_8g006220 33.939 495 280 16 2 471 3 475 1.24e-71 235
MS.gene038256.t1 MTR_8g006710 31.084 489 299 10 2 476 3 467 8.04e-71 233
MS.gene038256.t1 MTR_8g006730 31.557 488 287 12 2 470 3 462 1.36e-70 232
MS.gene038256.t1 MTR_7g117170 34.096 481 276 16 6 470 16 471 1.40e-70 232
MS.gene038256.t1 MTR_0184s0040 33.540 483 283 15 2 470 18 476 5.02e-68 226
MS.gene038256.t1 MTR_0078s0190 33.540 483 283 15 2 470 18 476 5.02e-68 226
MS.gene038256.t1 MTR_8g009055 32.787 488 281 15 2 470 3 462 1.16e-66 221
MS.gene038256.t1 MTR_6g033675 30.470 489 293 14 3 472 2 462 1.32e-66 222
MS.gene038256.t1 MTR_8g077590 32.106 489 276 17 4 470 8 462 3.24e-65 218
MS.gene038256.t1 MTR_8g006270 32.432 481 291 14 2 471 3 460 1.22e-64 216
MS.gene038256.t1 MTR_0078s0010 31.493 489 298 14 2 476 3 468 2.93e-64 215
MS.gene038256.t1 MTR_0078s0060 34.161 483 280 17 2 470 3 461 1.04e-63 214
MS.gene038256.t1 MTR_8g027870 33.333 483 271 17 6 470 19 468 1.67e-63 213
MS.gene038256.t1 MTR_8g009050 31.959 485 289 15 2 470 3 462 2.04e-62 210
MS.gene038256.t1 MTR_0184s0030 32.712 483 277 19 2 464 3 457 4.02e-62 210
MS.gene038256.t1 MTR_7g047030 31.393 481 297 14 2 470 3 462 8.70e-62 209
MS.gene038256.t1 MTR_7g047270 31.393 481 297 14 2 470 3 462 8.70e-62 209
MS.gene038256.t1 MTR_8g008990 32.787 488 283 18 2 470 3 464 1.95e-61 208
MS.gene038256.t1 MTR_8g027885 32.919 483 273 17 6 470 19 468 5.64e-61 207
MS.gene038256.t1 MTR_5g019580 30.957 491 297 16 2 470 4 474 7.03e-61 207
MS.gene038256.t1 MTR_1g019510 31.470 483 291 14 2 470 3 459 1.14e-60 206
MS.gene038256.t1 MTR_8g009073 31.365 491 282 14 2 470 3 460 1.59e-60 205
MS.gene038256.t1 MTR_6g033625 30.303 495 282 15 3 470 2 460 2.13e-60 205
MS.gene038256.t1 MTR_6g005600 31.056 483 295 15 3 470 4 463 4.85e-60 204
MS.gene038256.t1 MTR_8g006260 32.068 474 290 17 3 463 4 458 2.06e-59 202
MS.gene038256.t1 MTR_6g033615 31.393 481 281 14 3 470 2 446 2.28e-59 202
MS.gene038256.t1 MTR_6g033725 29.615 493 289 14 3 472 2 459 2.82e-59 202
MS.gene038256.t1 MTR_8g008970 31.172 478 300 14 2 470 3 460 1.77e-58 206
MS.gene038256.t1 MTR_8g008970 36.786 280 141 7 198 470 534 784 4.33e-40 154
MS.gene038256.t1 MTR_8g012745 32.025 484 286 16 2 467 3 461 2.30e-58 200
MS.gene038256.t1 MTR_8g009063 31.677 483 293 12 2 470 10 469 6.09e-58 199
MS.gene038256.t1 MTR_8g074550 30.632 506 302 18 2 477 5 491 9.26e-58 199
MS.gene038256.t1 MTR_8g009067 30.020 493 288 13 2 471 3 461 4.20e-57 196
MS.gene038256.t1 MTR_8g012635 30.178 507 286 16 2 476 3 473 1.22e-56 195
MS.gene038256.t1 MTR_8g012650 29.878 492 283 15 2 464 3 461 4.62e-56 194
MS.gene038256.t1 MTR_6g033660 29.158 487 295 12 6 472 5 461 9.20e-56 193
MS.gene038256.t1 MTR_5g019580 30.285 492 271 18 2 470 56 498 1.42e-54 191
MS.gene038256.t1 MTR_7g046490 30.909 495 280 19 2 471 3 460 7.62e-54 187
MS.gene038256.t1 MTR_8g066610 30.588 510 269 19 5 472 9 475 4.72e-52 183
MS.gene038256.t1 MTR_4g095008 30.208 480 271 17 16 471 22 461 7.45e-51 181
MS.gene038256.t1 MTR_8g009073 37.050 278 160 6 197 470 65 331 4.69e-50 174
MS.gene038256.t1 MTR_8g009067 31.781 365 207 8 124 471 4 343 4.81e-50 174
MS.gene038256.t1 MTR_7g102460 28.346 508 304 17 3 477 7 487 4.95e-48 173
MS.gene038256.t1 MTR_4g094920 27.291 491 301 14 5 475 26 480 1.01e-47 172
MS.gene038256.t1 MTR_7g102490 28.963 511 299 19 3 477 7 489 2.23e-47 171
MS.gene038256.t1 MTR_3g479520 28.101 516 289 15 2 477 12 485 3.58e-47 170
MS.gene038256.t1 MTR_4g031800 35.235 298 157 10 200 478 196 476 1.81e-46 168
MS.gene038256.t1 MTR_1g019520 40.265 226 118 3 259 478 2 216 4.37e-46 160
MS.gene038256.t1 MTR_6g038240 27.823 496 282 16 5 475 11 455 1.05e-45 166
MS.gene038256.t1 MTR_7g102550 28.687 495 296 16 3 465 7 476 1.34e-45 166
MS.gene038256.t1 MTR_5g029800 28.657 499 295 20 5 474 11 477 1.93e-45 165
MS.gene038256.t1 MTR_8g012730 35.379 277 133 8 197 462 55 296 3.26e-45 160
MS.gene038256.t1 MTR_4g117890 27.634 503 296 18 2 474 10 474 4.44e-45 164
MS.gene038256.t1 MTR_0536s0020 28.947 494 297 17 2 472 15 477 5.15e-45 164
MS.gene038256.t1 MTR_1g107360 27.677 495 297 17 5 477 9 464 7.62e-45 163
MS.gene038256.t1 MTR_3g069710 28.685 502 274 15 2 476 9 453 7.63e-45 163
MS.gene038256.t1 MTR_4g024020 26.523 509 311 14 3 475 7 488 7.98e-45 164
MS.gene038256.t1 MTR_4g485630 27.327 505 294 16 2 472 6 471 1.14e-44 163
MS.gene038256.t1 MTR_4g118000 29.435 496 283 22 8 477 15 469 1.26e-44 163
MS.gene038256.t1 MTR_4g094220 27.237 514 286 18 3 471 5 475 4.67e-44 161
MS.gene038256.t1 MTR_8g012630 38.967 213 116 4 261 467 204 408 1.46e-43 159
MS.gene038256.t1 MTR_6g035185 28.200 500 291 19 8 472 14 480 2.01e-43 160
MS.gene038256.t1 MTR_1g107285 26.210 496 300 16 5 474 8 463 6.93e-43 158
MS.gene038256.t1 MTR_7g012120 32.329 365 211 11 125 472 136 481 1.19e-42 158
MS.gene038256.t1 MTR_6g014290 27.148 512 300 18 2 477 7 481 1.28e-42 157
MS.gene038256.t1 MTR_5g035580 26.220 492 294 14 5 476 13 455 1.59e-42 157
MS.gene038256.t1 MTR_6g014220 27.767 515 288 17 2 475 7 478 2.25e-42 157
MS.gene038256.t1 MTR_5g464760 27.853 517 283 17 3 475 10 480 2.67e-42 157
MS.gene038256.t1 MTR_5g045970 27.184 515 296 19 5 476 16 494 3.01e-42 157
MS.gene038256.t1 MTR_2g098430 28.157 483 287 19 2 457 3 452 3.33e-42 157
MS.gene038256.t1 MTR_3g049970 26.263 495 312 16 5 477 9 472 3.44e-42 156
MS.gene038256.t1 MTR_1g062380 27.203 522 288 18 5 476 16 495 4.11e-42 156
MS.gene038256.t1 MTR_4g485620 30.688 378 220 11 113 472 99 452 4.36e-42 156
MS.gene038256.t1 MTR_3g069690 27.655 499 289 16 2 478 5 453 5.07e-42 155
MS.gene038256.t1 MTR_8g064880 30.978 368 208 13 83 432 92 431 7.37e-42 155
MS.gene038256.t1 MTR_7g070610 31.053 380 222 12 114 472 124 484 9.57e-42 155
MS.gene038256.t1 MTR_1g107350 26.210 496 305 15 5 474 8 468 1.31e-41 155
MS.gene038256.t1 MTR_3g079480 26.019 515 301 13 2 477 18 491 1.47e-41 155
MS.gene038256.t1 MTR_7g102450 27.565 497 299 16 8 477 12 474 1.95e-41 154
MS.gene038256.t1 MTR_0891s0010 33.218 289 164 5 197 477 25 292 2.12e-41 150
MS.gene038256.t1 MTR_3g479490 26.419 511 304 14 2 477 3 476 2.75e-41 154
MS.gene038256.t1 MTR_6g014040 26.419 511 303 17 2 475 7 481 3.42e-41 154
MS.gene038256.t1 MTR_5g067170 26.694 487 312 13 8 472 14 477 5.45e-41 153
MS.gene038256.t1 MTR_7g070660 30.423 378 222 12 114 472 122 477 6.31e-41 153
MS.gene038256.t1 MTR_2g035040 28.608 395 230 16 109 472 11 384 8.20e-41 150
MS.gene038256.t1 MTR_2g035020 27.255 499 302 19 5 472 11 479 8.41e-41 153
MS.gene038256.t1 MTR_7g117405 27.655 499 304 16 7 477 14 483 9.82e-41 152
MS.gene038256.t1 MTR_5g016660 27.435 503 301 16 3 471 8 480 9.96e-41 152
MS.gene038256.t1 MTR_6g078320 26.626 492 323 16 4 476 10 482 1.20e-40 152
MS.gene038256.t1 MTR_6g035265 26.585 489 304 18 8 472 14 471 1.36e-40 152
MS.gene038256.t1 MTR_4g128690 27.950 483 290 15 5 474 15 452 1.46e-40 151
MS.gene038256.t1 MTR_6g014250 25.197 508 310 15 2 475 7 478 1.77e-40 152
MS.gene038256.t1 MTR_4g117960 26.263 495 305 19 8 472 14 478 1.94e-40 152
MS.gene038256.t1 MTR_4g117980 28.367 490 302 19 8 472 14 479 2.46e-40 151
MS.gene038256.t1 MTR_7g080900 25.963 493 295 15 2 472 9 453 2.54e-40 151
MS.gene038256.t1 MTR_7g071040 27.022 507 300 16 3 472 15 488 3.43e-40 151
MS.gene038256.t1 MTR_5g464810 28.274 481 278 14 4 455 11 453 3.82e-40 150
MS.gene038256.t1 MTR_5g064240 28.274 481 278 14 4 455 11 453 3.82e-40 150
MS.gene038256.t1 MTR_1g032490 28.784 403 235 13 91 474 101 470 5.37e-40 150
MS.gene038256.t1 MTR_5g039900 26.953 512 285 16 5 471 13 480 5.61e-40 150
MS.gene038256.t1 MTR_7g102560 26.499 517 299 19 5 477 7 486 6.23e-40 150
MS.gene038256.t1 MTR_0036s0220 27.835 485 273 15 5 455 12 453 6.93e-40 150
MS.gene038256.t1 MTR_2g034990 27.510 498 302 19 5 472 11 479 8.41e-40 150
MS.gene038256.t1 MTR_5g040030 27.432 514 289 17 2 471 11 484 8.86e-40 150
MS.gene038256.t1 MTR_7g070800 26.275 510 292 16 5 472 6 473 1.75e-39 149
MS.gene038256.t1 MTR_7g070740 27.326 516 286 19 3 472 9 481 1.87e-39 149
MS.gene038256.t1 MTR_5g045960 26.969 508 314 19 2 477 6 488 1.96e-39 149
MS.gene038256.t1 MTR_8g064870 27.913 412 245 14 83 474 94 473 2.46e-39 149
MS.gene038256.t1 MTR_8g466240 27.677 495 282 19 3 471 6 450 3.01e-39 148
MS.gene038256.t1 MTR_7g070860 25.595 504 295 15 2 472 4 460 3.53e-39 148
MS.gene038256.t1 MTR_7g070810 26.877 506 297 15 2 472 6 473 4.89e-39 148
MS.gene038256.t1 MTR_7g011470 27.487 382 223 10 111 475 122 466 5.46e-39 147
MS.gene038256.t1 MTR_4g064987 27.143 490 295 18 3 475 6 450 7.96e-39 147
MS.gene038256.t1 MTR_8g071070 29.679 374 228 13 113 474 118 468 1.03e-38 147
MS.gene038256.t1 MTR_5g072810 26.543 486 299 14 4 474 11 453 1.11e-38 146
MS.gene038256.t1 MTR_7g055710 27.022 507 295 16 5 472 11 481 1.16e-38 147
MS.gene038256.t1 MTR_7g011470 26.702 382 222 8 111 475 122 462 1.48e-38 146
MS.gene038256.t1 MTR_3g008010 25.147 509 307 13 3 475 8 478 1.53e-38 146
MS.gene038256.t1 MTR_4g117950 28.024 496 294 17 2 472 3 460 1.61e-38 146
MS.gene038256.t1 MTR_6g014050 28.354 395 217 11 111 475 123 481 1.64e-38 146
MS.gene038256.t1 MTR_5g035560 25.971 489 299 13 5 476 11 453 1.70e-38 146
MS.gene038256.t1 MTR_2g008210 24.805 512 305 12 2 475 8 477 1.72e-38 146
MS.gene038256.t1 MTR_1g107365 26.411 496 290 16 5 474 45 491 1.96e-38 146
MS.gene038256.t1 MTR_1g107315 28.501 407 239 13 91 478 99 472 2.06e-38 146
MS.gene038256.t1 MTR_4g082820 27.236 492 309 19 5 478 7 467 2.25e-38 145
MS.gene038256.t1 MTR_3g479610 31.579 285 152 6 208 477 59 315 2.42e-38 142
MS.gene038256.t1 MTR_4g082810 32.979 282 162 7 126 394 125 392 2.51e-38 144
MS.gene038256.t1 MTR_5g087620 25.540 509 313 16 2 472 7 487 3.03e-38 145
MS.gene038256.t1 MTR_4g108250 27.553 519 281 18 5 472 11 485 4.64e-38 145
MS.gene038256.t1 MTR_4g064987 27.551 490 287 21 3 475 6 444 5.69e-38 144
MS.gene038256.t1 MTR_0536s0010 26.411 496 301 16 2 472 18 474 7.39e-38 144
MS.gene038256.t1 MTR_4g008630 34.066 273 159 10 208 474 205 462 7.79e-38 144
MS.gene038256.t1 MTR_8g059425 26.358 497 293 17 2 462 7 466 1.38e-37 144
MS.gene038256.t1 MTR_0288s0020 25.349 501 301 13 2 475 7 461 1.86e-37 143
MS.gene038256.t1 MTR_7g070780 26.494 502 304 13 5 472 11 481 2.26e-37 143
MS.gene038256.t1 MTR_1g107375 25.859 495 293 16 5 474 8 453 2.36e-37 142
MS.gene038256.t1 MTR_6g038200 24.390 492 282 16 4 463 10 443 2.56e-37 142
MS.gene038256.t1 MTR_7g013200 23.093 472 318 13 9 475 9 440 2.80e-37 142
MS.gene038256.t1 MTR_8g083290 26.044 503 298 15 5 475 4 464 3.13e-37 142
MS.gene038256.t1 MTR_7g070940 34.074 270 157 7 210 472 215 470 4.35e-37 142
MS.gene038256.t1 MTR_1g040310 28.291 509 282 21 5 472 15 481 5.50e-37 142
MS.gene038256.t1 MTR_3g479470 26.862 443 271 13 2 414 10 429 6.41e-37 142
MS.gene038256.t1 MTR_5g072860 26.000 500 286 14 5 471 18 466 6.60e-37 142
MS.gene038256.t1 MTR_7g070910 27.432 514 289 21 3 472 9 482 6.79e-37 142
MS.gene038256.t1 MTR_6g035295 26.786 504 300 16 5 472 12 482 8.03e-37 142
MS.gene038256.t1 MTR_7g102520 26.892 502 310 17 7 476 14 490 8.69e-37 142
MS.gene038256.t1 MTR_4g485590 29.398 432 231 16 4 413 8 387 9.27e-37 140
MS.gene038256.t1 MTR_6g013440 26.923 520 288 20 2 475 8 481 1.21e-36 141
MS.gene038256.t1 MTR_6g038220 25.934 482 284 18 5 463 11 442 1.56e-36 140
MS.gene038256.t1 MTR_8g044140 30.435 391 209 16 114 472 87 446 2.19e-36 140
MS.gene038256.t1 MTR_1g107380 29.545 308 178 9 180 475 193 473 2.22e-36 140
MS.gene038256.t1 MTR_6g014170 26.190 504 294 15 2 475 7 462 2.47e-36 140
MS.gene038256.t1 MTR_5g031830 25.749 501 299 15 5 474 12 470 2.62e-36 140
MS.gene038256.t1 MTR_5g075440 27.865 384 224 10 112 476 108 457 3.04e-36 139
MS.gene038256.t1 MTR_5g016480 25.388 516 296 22 2 476 5 472 3.05e-36 140
MS.gene038256.t1 MTR_5g031840 25.825 515 287 19 1 474 1 461 3.49e-36 139
MS.gene038256.t1 MTR_1g029540 34.025 241 142 8 240 474 230 459 3.88e-36 139
MS.gene038256.t1 MTR_6g014270 25.586 512 305 18 3 475 5 479 3.88e-36 140
MS.gene038256.t1 MTR_7g070930 26.367 512 293 17 5 472 14 485 4.60e-36 140
MS.gene038256.t1 MTR_0009s0240 26.441 503 284 19 3 471 5 455 5.11e-36 139
MS.gene038256.t1 MTR_6g014300 26.892 502 295 19 2 475 9 466 7.92e-36 139
MS.gene038256.t1 MTR_3g009490 36.979 192 107 6 287 472 3 186 8.78e-36 131
MS.gene038256.t1 MTR_6g014020 24.853 511 310 17 2 475 7 480 1.22e-35 138
MS.gene038256.t1 MTR_6g014187 24.803 508 314 16 2 475 7 480 1.46e-35 138
MS.gene038256.t1 MTR_7g013220 24.025 487 318 16 1 473 1 449 1.47e-35 137
MS.gene038256.t1 MTR_4g485640 28.267 375 232 9 114 471 309 663 1.67e-35 140
MS.gene038256.t1 MTR_6g014310 26.992 389 230 10 111 475 123 481 2.18e-35 137
MS.gene038256.t1 MTR_6g038300 26.281 449 270 13 5 431 11 420 2.59e-35 137
MS.gene038256.t1 MTR_8g032950 30.968 310 187 8 180 472 179 478 4.42e-35 137
MS.gene038256.t1 MTR_7g080950 24.291 494 306 15 3 476 4 449 7.43e-35 135
MS.gene038256.t1 MTR_5g072830 24.846 487 303 14 4 474 9 448 7.80e-35 135
MS.gene038256.t1 MTR_7g070870 31.190 311 175 7 169 472 178 456 1.58e-34 135
MS.gene038256.t1 MTR_2g059240 28.061 392 208 12 114 475 122 469 1.81e-34 135
MS.gene038256.t1 MTR_5g031860 26.482 506 288 18 5 474 12 469 2.42e-34 134
MS.gene038256.t1 MTR_5g072820 24.795 488 302 13 4 474 9 448 2.53e-34 134
MS.gene038256.t1 MTR_6g013450 26.700 397 222 11 111 475 122 481 2.58e-34 134
MS.gene038256.t1 MTR_6g014200 28.462 390 223 14 111 475 119 477 6.07e-34 133
MS.gene038256.t1 MTR_7g080935 23.434 495 309 15 3 476 9 454 8.51e-34 133
MS.gene038256.t1 MTR_6g013920 26.718 393 226 13 111 475 121 479 1.30e-33 132
MS.gene038256.t1 MTR_7g013240 23.418 474 309 11 9 473 10 438 2.03e-33 131
MS.gene038256.t1 MTR_6g038230 24.845 483 291 16 4 463 10 443 3.94e-33 130
MS.gene038256.t1 MTR_8g090095 31.469 286 174 10 197 474 208 479 5.25e-33 131
MS.gene038256.t1 MTR_8g083280 30.258 271 154 6 211 475 221 462 5.39e-33 130
MS.gene038256.t1 MTR_7g039550 35.484 217 127 3 258 471 52 258 5.48e-33 126
MS.gene038256.t1 MTR_6g013990 26.546 388 231 12 111 475 122 478 7.12e-33 130
MS.gene038256.t1 MTR_5g072840 24.131 489 308 13 4 476 9 450 7.87e-33 130
MS.gene038256.t1 MTR_7g013180 22.934 484 321 12 1 473 1 443 1.28e-32 129
MS.gene038256.t1 MTR_7g080940 23.185 496 313 14 3 478 9 456 1.70e-32 129
MS.gene038256.t1 MTR_8g088560 25.510 490 299 16 5 472 10 455 3.64e-32 128
MS.gene038256.t1 MTR_5g058320 28.425 292 167 6 197 475 203 465 5.10e-32 128
MS.gene038256.t1 MTR_6g013900 26.718 393 231 13 111 477 121 482 1.31e-31 127
MS.gene038256.t1 MTR_5g098960 26.066 422 266 12 1 407 3 393 1.31e-31 126
MS.gene038256.t1 MTR_6g014150 26.786 392 227 11 111 475 119 477 2.43e-31 126
MS.gene038256.t1 MTR_7g470610 31.046 306 159 10 118 408 2 270 2.76e-31 122
MS.gene038256.t1 MTR_7g070583 31.046 306 159 10 118 408 2 270 2.76e-31 122
MS.gene038256.t1 MTR_7g013260 23.431 478 305 13 9 473 10 439 4.49e-31 125
MS.gene038256.t1 MTR_8g043470 33.488 215 117 4 259 471 184 374 5.94e-31 123
MS.gene038256.t1 MTR_8g009840 36.000 225 129 5 253 470 305 521 6.81e-31 125
MS.gene038256.t1 MTR_4g128720 24.949 493 303 15 1 474 11 455 9.81e-31 124
MS.gene038256.t1 MTR_6g013960 28.622 283 160 7 206 475 227 480 1.02e-30 124
MS.gene038256.t1 MTR_6g014190 28.881 277 155 6 212 475 40 287 1.91e-30 120
MS.gene038256.t1 MTR_5g066410 29.679 374 198 15 91 448 91 415 2.09e-30 123
MS.gene038256.t1 MTR_5g004940 32.432 259 133 8 222 477 161 380 2.22e-30 122
MS.gene038256.t1 MTR_3g031400 23.742 497 291 14 4 475 17 450 3.23e-30 123
MS.gene038256.t1 MTR_6g014240 26.902 368 207 9 124 471 118 443 5.51e-30 122
MS.gene038256.t1 MTR_6g011340 25.193 389 237 10 111 475 122 480 1.08e-29 121
MS.gene038256.t1 MTR_3g084530 23.992 496 318 16 7 474 8 472 1.13e-29 121
MS.gene038256.t1 MTR_3g084540 24.798 496 315 20 7 474 8 473 3.42e-29 120
MS.gene038256.t1 MTR_2086s0010 33.333 195 105 3 285 477 3 174 3.42e-29 113
MS.gene038256.t1 MTR_1996s0010 33.333 195 105 3 285 477 3 174 3.42e-29 113
MS.gene038256.t1 MTR_3g031450 23.600 500 288 15 4 472 17 453 4.64e-29 119
MS.gene038256.t1 MTR_0477s0010 27.397 365 200 10 124 475 5 317 6.45e-29 116
MS.gene038256.t1 MTR_8g007565 29.894 378 201 15 94 448 103 439 2.59e-28 117
MS.gene038256.t1 MTR_8g007650 29.894 378 201 15 94 448 103 439 4.83e-28 116
MS.gene038256.t1 MTR_8g007585 30.909 220 126 3 258 475 197 392 5.32e-28 115
MS.gene038256.t1 MTR_7g071050 25.527 474 272 18 3 457 11 422 1.05e-27 115
MS.gene038256.t1 MTR_5g027210 30.172 232 145 6 251 477 265 484 4.00e-27 114
MS.gene038256.t1 MTR_3g084520 27.622 286 161 9 211 474 211 472 7.73e-27 113
MS.gene038256.t1 MTR_2g046620 32.685 257 146 8 200 451 205 439 4.27e-26 110
MS.gene038256.t1 MTR_4g123553 33.977 259 134 12 203 451 207 438 8.69e-26 110
MS.gene038256.t1 MTR_8g068340 29.032 279 167 10 201 474 212 464 3.27e-25 108
MS.gene038256.t1 MTR_7g070760 32.000 225 99 5 197 408 19 202 8.96e-25 102
MS.gene038256.t1 MTR_8g068330 32.883 222 124 7 260 478 265 464 1.01e-24 107
MS.gene038256.t1 MTR_2g008226 32.283 254 137 12 207 452 222 448 1.33e-24 106
MS.gene038256.t1 MTR_0078s0200 29.141 326 194 12 2 310 3 308 2.14e-24 103
MS.gene038256.t1 MTR_2g008225 32.685 257 142 9 204 451 209 443 2.53e-24 105
MS.gene038256.t1 MTR_2g008220 32.819 259 137 12 203 451 211 442 6.68e-24 104
MS.gene038256.t1 MTR_7g067120 24.800 500 269 18 2 474 6 425 9.42e-24 103
MS.gene038256.t1 MTR_8g006230 30.144 209 135 5 111 314 52 254 9.93e-24 101
MS.gene038256.t1 MTR_7g070995 40.769 130 73 2 347 472 13 142 1.20e-23 97.4
MS.gene038256.t1 MTR_2g014900 27.138 269 171 6 207 474 208 452 2.35e-23 102
MS.gene038256.t1 MTR_4g079270 27.636 275 169 6 197 467 199 447 3.08e-23 102
MS.gene038256.t1 MTR_5g072850 31.658 199 97 6 205 394 154 322 5.28e-23 100
MS.gene038256.t1 MTR_8g056740 29.900 301 151 11 114 408 56 302 6.10e-23 100
MS.gene038256.t1 MTR_7g067330 29.876 241 133 9 239 474 216 425 2.31e-22 99.8
MS.gene038256.t1 MTR_8g068360 32.308 195 111 7 260 451 268 444 3.19e-22 99.8
MS.gene038256.t1 MTR_4g079250 27.273 275 170 5 197 467 199 447 3.60e-22 99.4
MS.gene038256.t1 MTR_6g036650 36.923 195 98 8 260 451 276 448 5.96e-22 99.0
MS.gene038256.t1 MTR_6g014185 27.240 279 135 9 208 475 124 345 8.17e-22 97.1
MS.gene038256.t1 MTR_5g066390 33.113 151 87 2 327 475 77 215 8.24e-22 94.0
MS.gene038256.t1 MTR_4g077960 29.921 254 151 8 203 451 184 415 1.52e-21 97.4
MS.gene038256.t1 MTR_0536s0030 37.086 151 86 6 330 472 200 349 7.32e-21 94.4
MS.gene038256.t1 MTR_6g013680 24.810 395 179 15 111 475 69 375 9.35e-21 94.4
MS.gene038256.t1 MTR_6g042310 24.684 474 288 17 1 451 14 441 2.00e-20 94.0
MS.gene038256.t1 MTR_6g014000 32.468 154 84 5 326 476 21 157 4.77e-20 93.2
MS.gene038256.t1 MTR_3g435310 33.846 195 104 7 260 451 225 397 6.54e-20 92.0
MS.gene038256.t1 MTR_4g059370 26.087 276 181 7 198 471 131 385 7.94e-20 91.7
MS.gene038256.t1 MTR_1g107325 29.310 174 113 3 306 477 190 355 9.08e-20 91.3
MS.gene038256.t1 MTR_6g014160 27.344 256 118 9 197 441 200 398 1.15e-19 91.3
MS.gene038256.t1 MTR_1g090270 26.840 231 150 6 243 471 245 458 3.55e-19 90.5
MS.gene038256.t1 MTR_3g009500 29.123 285 168 14 1 267 1 269 7.44e-19 86.7
MS.gene038256.t1 MTR_2g083480 27.341 267 162 8 204 465 206 445 9.47e-17 82.8
MS.gene038256.t1 MTR_5g090680 85.714 42 6 0 1 42 1 42 1.25e-16 76.3
MS.gene038256.t1 MTR_3g009520 26.515 264 164 11 2 247 3 254 3.76e-16 79.0
MS.gene038256.t1 MTR_2g083430 26.154 260 160 7 204 458 206 438 2.39e-14 75.5
MS.gene038256.t1 MTR_6g052375 32.716 162 83 4 197 352 53 194 3.95e-14 73.6
MS.gene038256.t1 MTR_2g083380 27.239 268 161 8 197 458 216 455 2.65e-13 72.4
MS.gene038256.t1 MTR_6g014186 22.004 509 289 20 2 475 4 439 3.56e-12 68.6
MS.gene038256.t1 MTR_5g090590 57.407 54 23 0 403 456 1 54 3.81e-12 62.0
MS.gene038256.t1 MTR_1g090280 24.479 192 128 4 285 474 135 311 9.96e-12 66.2
MS.gene038256.t1 MTR_0475s0030 46.552 58 31 0 357 414 11 68 1.90e-11 60.8
MS.gene038256.t1 MTR_2g009740 27.044 159 97 3 197 353 137 278 6.36e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038256.t1 AT3G21760 44.040 495 246 9 3 478 2 484 2.66e-138 407
MS.gene038256.t1 AT3G21750 40.292 479 275 4 3 478 2 472 3.96e-130 385
MS.gene038256.t1 AT4G15280 42.531 482 262 8 3 476 2 476 4.57e-126 375
MS.gene038256.t1 AT4G15280 42.531 482 262 8 3 476 34 508 9.71e-126 375
MS.gene038256.t1 AT3G21790 40.900 489 268 10 3 478 2 482 6.73e-125 373
MS.gene038256.t1 AT3G21780 42.324 482 261 8 3 478 2 472 8.05e-125 372
MS.gene038256.t1 AT3G21800 40.695 489 269 10 1 478 1 479 3.34e-119 358
MS.gene038256.t1 AT1G07250 41.770 486 250 12 1 471 2 469 1.70e-117 353
MS.gene038256.t1 AT4G15260 45.330 364 190 5 118 478 1 358 4.16e-108 325
MS.gene038256.t1 AT2G29730 38.589 482 262 11 1 471 1 459 1.09e-105 323
MS.gene038256.t1 AT1G07240 38.742 493 269 10 1 476 1 477 1.34e-105 323
MS.gene038256.t1 AT1G07260 38.980 490 263 13 3 476 4 473 3.13e-105 322
MS.gene038256.t1 AT2G29740 38.969 485 265 14 2 472 5 472 7.95e-105 321
MS.gene038256.t1 AT2G29750 39.184 490 260 17 2 472 5 475 1.04e-96 300
MS.gene038256.t1 AT2G29710 38.095 483 263 12 1 471 1 459 1.11e-96 300
MS.gene038256.t1 AT3G16520 32.919 483 287 13 1 472 1 457 1.05e-73 240
MS.gene038256.t1 AT3G16520 32.632 475 283 13 1 464 1 449 1.53e-71 234
MS.gene038256.t1 AT3G16520 33.120 468 274 13 1 457 1 440 3.27e-71 233
MS.gene038256.t1 AT4G01070 31.501 473 300 12 2 467 5 460 4.04e-67 223
MS.gene038256.t1 AT1G01420 32.495 477 289 13 5 470 8 462 1.98e-63 213
MS.gene038256.t1 AT1G01420 32.495 477 289 13 5 470 11 465 2.70e-63 213
MS.gene038256.t1 AT5G66690 31.524 479 282 19 1 461 3 453 6.75e-63 212
MS.gene038256.t1 AT5G26310 30.879 489 281 18 1 466 3 457 1.19e-61 209
MS.gene038256.t1 AT1G01390 31.875 480 291 16 5 471 8 464 2.38e-59 202
MS.gene038256.t1 AT1G01390 31.875 480 291 16 5 471 25 481 3.75e-59 202
MS.gene038256.t1 AT3G50740 29.435 496 299 18 1 472 3 471 2.87e-58 200
MS.gene038256.t1 AT4G36770 31.789 475 284 15 8 467 7 456 3.15e-58 199
MS.gene038256.t1 AT2G18570 30.247 486 285 18 1 463 1 455 6.55e-55 191
MS.gene038256.t1 AT5G12890 29.586 507 293 22 2 475 7 482 1.22e-50 179
MS.gene038256.t1 AT2G36760 27.930 512 294 17 7 478 16 492 5.41e-50 178
MS.gene038256.t1 AT2G36770 26.877 506 307 17 7 478 16 492 2.65e-49 176
MS.gene038256.t1 AT2G36750 27.129 505 302 13 7 476 12 485 1.35e-47 171
MS.gene038256.t1 AT2G15480 29.435 513 279 17 2 472 7 478 3.94e-47 170
MS.gene038256.t1 AT2G15480 29.063 523 278 17 2 472 7 488 4.82e-47 170
MS.gene038256.t1 AT2G36780 27.043 514 292 17 7 476 16 490 7.74e-47 169
MS.gene038256.t1 AT2G36800 29.259 499 299 20 7 475 14 488 1.24e-46 169
MS.gene038256.t1 AT4G34131 28.906 512 282 17 2 472 7 477 2.23e-46 168
MS.gene038256.t1 AT2G15490 29.354 511 279 18 5 472 7 478 3.61e-46 167
MS.gene038256.t1 AT4G34138 28.599 514 277 18 3 472 9 476 4.00e-46 167
MS.gene038256.t1 AT2G18560 31.880 367 218 13 114 467 22 369 1.43e-45 163
MS.gene038256.t1 AT2G15490 29.354 511 276 18 5 472 7 475 1.53e-45 166
MS.gene038256.t1 AT3G53160 28.543 508 294 17 7 477 10 485 1.62e-45 166
MS.gene038256.t1 AT1G78270 28.926 484 263 16 2 448 10 449 7.62e-45 164
MS.gene038256.t1 AT4G34135 28.936 470 263 15 2 436 8 441 2.76e-44 162
MS.gene038256.t1 AT1G22400 27.386 482 274 13 2 448 10 450 6.16e-44 161
MS.gene038256.t1 AT3G46660 26.598 485 302 17 3 474 12 455 2.57e-43 159
MS.gene038256.t1 AT2G36790 27.968 497 309 17 7 476 15 489 7.10e-43 159
MS.gene038256.t1 AT3G46670 27.329 483 295 16 5 474 9 448 3.27e-42 156
MS.gene038256.t1 AT1G22340 27.079 517 288 15 2 474 10 481 3.69e-42 156
MS.gene038256.t1 AT5G59580 27.027 481 298 17 3 472 7 445 2.00e-41 154
MS.gene038256.t1 AT2G31790 26.069 491 300 13 2 471 5 453 2.59e-41 154
MS.gene038256.t1 AT1G22380 26.181 508 305 14 2 475 10 481 2.67e-41 154
MS.gene038256.t1 AT5G59590 27.386 482 300 16 1 472 6 447 2.82e-41 153
MS.gene038256.t1 AT3G11340 28.515 505 265 17 3 476 7 446 4.79e-41 152
MS.gene038256.t1 AT3G55710 27.699 491 300 13 2 476 5 456 1.14e-40 152
MS.gene038256.t1 AT3G55700 32.740 281 156 6 201 476 200 452 8.58e-40 149
MS.gene038256.t1 AT1G22360 26.488 521 287 16 2 475 7 478 1.10e-39 149
MS.gene038256.t1 AT3G46700 25.000 496 300 14 1 477 5 447 1.61e-39 148
MS.gene038256.t1 AT3G46650 25.567 485 292 16 3 476 8 434 4.17e-39 147
MS.gene038256.t1 AT2G16890 26.733 505 293 18 5 478 9 467 8.23e-39 147
MS.gene038256.t1 AT1G22360 26.744 516 280 16 2 475 7 466 9.87e-39 147
MS.gene038256.t1 AT5G38010 28.279 488 294 20 2 474 7 453 1.29e-38 146
MS.gene038256.t1 AT5G14860 27.129 505 296 20 5 474 8 475 7.94e-38 144
MS.gene038256.t1 AT1G22370 28.211 436 261 14 2 410 10 420 8.20e-38 144
MS.gene038256.t1 AT3G46690 26.157 497 292 19 1 474 5 449 1.22e-37 143
MS.gene038256.t1 AT2G30150 26.789 489 298 12 5 478 13 456 3.81e-36 139
MS.gene038256.t1 AT4G15490 27.022 507 297 21 2 477 5 469 5.62e-36 139
MS.gene038256.t1 AT3G46680 26.380 489 299 19 2 474 6 449 6.87e-36 138
MS.gene038256.t1 AT3G21560 24.951 513 290 17 5 474 12 472 1.61e-35 138
MS.gene038256.t1 AT2G30150 26.598 485 296 12 9 478 1 440 1.84e-35 137
MS.gene038256.t1 AT2G23250 32.986 288 155 8 197 474 176 435 2.33e-35 137
MS.gene038256.t1 AT5G17050 26.733 404 252 9 82 476 90 458 4.41e-35 136
MS.gene038256.t1 AT2G23260 32.423 293 155 8 197 474 189 453 4.73e-35 136
MS.gene038256.t1 AT2G43820 27.455 499 286 22 2 477 4 449 5.26e-35 136
MS.gene038256.t1 AT2G36970 24.474 380 247 8 111 478 123 474 6.79e-35 136
MS.gene038256.t1 AT4G15270 33.493 209 135 3 3 207 2 210 9.28e-35 130
MS.gene038256.t1 AT4G15500 27.901 405 232 15 95 476 97 464 1.05e-34 135
MS.gene038256.t1 AT1G73880 26.389 504 294 19 3 476 12 468 1.14e-34 135
MS.gene038256.t1 AT2G28080 27.586 406 248 9 85 478 104 475 1.20e-34 135
MS.gene038256.t1 AT4G15270 32.432 222 146 3 3 220 2 223 2.26e-34 131
MS.gene038256.t1 AT4G15270 36.667 90 57 0 389 478 213 302 6.74e-11 63.9
MS.gene038256.t1 AT5G05870 26.735 490 300 19 3 474 6 454 3.32e-34 134
MS.gene038256.t1 AT4G15480 26.509 381 240 11 108 474 124 478 3.67e-34 134
MS.gene038256.t1 AT5G38040 27.234 470 284 19 16 471 21 446 3.84e-34 134
MS.gene038256.t1 AT3G53150 25.564 532 304 21 2 478 19 513 4.68e-34 134
MS.gene038256.t1 AT2G16890 26.498 434 254 14 5 410 9 405 6.07e-34 132
MS.gene038256.t1 AT4G01070 28.895 353 235 9 2 349 5 346 8.70e-34 130
MS.gene038256.t1 AT2G30140 25.361 485 304 14 5 476 13 452 1.20e-33 132
MS.gene038256.t1 AT2G30140 25.155 485 306 14 5 476 13 453 1.25e-33 132
MS.gene038256.t1 AT2G31750 23.669 507 302 15 3 478 6 458 1.74e-33 132
MS.gene038256.t1 AT2G31750 23.810 504 299 15 3 475 6 455 2.78e-33 131
MS.gene038256.t1 AT4G15550 25.051 491 315 15 7 475 15 474 3.22e-33 131
MS.gene038256.t1 AT2G43840 27.163 497 282 18 3 474 5 446 4.74e-33 130
MS.gene038256.t1 AT5G05880 26.899 487 293 16 5 474 8 448 5.12e-33 130
MS.gene038256.t1 AT5G17030 28.492 358 218 8 127 476 130 457 8.03e-33 130
MS.gene038256.t1 AT1G05680 23.265 490 309 12 4 471 5 449 1.00e-32 129
MS.gene038256.t1 AT2G43840 26.453 499 283 17 3 474 5 446 1.02e-32 129
MS.gene038256.t1 AT1G24100 25.000 504 292 19 3 474 9 458 1.19e-32 129
MS.gene038256.t1 AT1G51210 25.840 476 263 13 3 449 18 432 1.96e-32 128
MS.gene038256.t1 AT4G15270 34.359 195 124 3 3 193 2 196 9.62e-32 122
MS.gene038256.t1 AT3G02100 23.944 497 317 13 1 478 9 463 1.34e-31 127
MS.gene038256.t1 AT1G05675 23.251 486 314 15 4 471 5 449 2.16e-31 126
MS.gene038256.t1 AT5G03490 26.104 498 286 17 2 471 16 459 3.92e-31 125
MS.gene038256.t1 AT1G30530 27.882 373 229 11 111 476 113 452 4.08e-31 125
MS.gene038256.t1 AT1G10400 25.000 516 293 18 1 476 3 464 4.30e-31 125
MS.gene038256.t1 AT5G05890 26.360 478 311 15 5 474 8 452 5.71e-31 125
MS.gene038256.t1 AT3G46720 26.033 484 298 21 2 474 6 440 1.17e-30 124
MS.gene038256.t1 AT5G54010 26.240 484 301 16 3 474 4 443 4.85e-30 122
MS.gene038256.t1 AT1G22370 31.718 227 125 4 197 410 41 250 6.78e-30 119
MS.gene038256.t1 AT1G05560 24.750 501 306 20 1 477 1 454 8.74e-30 121
MS.gene038256.t1 AT2G26480 25.355 493 306 13 1 478 4 449 1.18e-29 121
MS.gene038256.t1 AT1G05560 24.750 501 306 20 1 477 51 504 1.55e-29 121
MS.gene038256.t1 AT1G05530 26.369 493 283 21 1 463 1 443 1.60e-29 120
MS.gene038256.t1 AT5G05860 31.469 286 165 8 195 475 189 448 2.38e-29 120
MS.gene038256.t1 AT5G05900 25.926 486 298 19 5 474 8 447 3.67e-29 119
MS.gene038256.t1 AT1G64910 30.769 286 173 8 194 478 180 441 3.72e-29 119
MS.gene038256.t1 AT5G17040 27.865 384 211 13 111 476 106 441 3.32e-28 117
MS.gene038256.t1 AT4G14090 24.242 495 300 18 2 472 10 453 1.20e-27 115
MS.gene038256.t1 AT1G64920 29.452 292 173 8 194 478 180 445 3.58e-27 114
MS.gene038256.t1 AT5G53990 29.021 286 178 7 194 478 180 441 4.84e-27 113
MS.gene038256.t1 AT4G27560 29.818 275 168 7 205 478 197 447 8.53e-27 112
MS.gene038256.t1 AT1G06000 31.058 293 170 10 191 471 158 430 1.33e-26 112
MS.gene038256.t1 AT5G65550 23.495 515 297 17 3 478 7 463 2.42e-26 111
MS.gene038256.t1 AT4G27570 28.727 275 171 7 205 478 197 447 5.08e-26 110
MS.gene038256.t1 AT5G37950 31.183 279 165 12 111 381 83 342 6.61e-26 108
MS.gene038256.t1 AT3G29630 28.521 284 179 6 197 478 183 444 7.22e-26 110
MS.gene038256.t1 AT5G37950 31.387 274 165 10 111 381 83 336 9.51e-26 108
MS.gene038256.t1 AT5G49690 31.418 261 134 12 201 451 207 432 4.41e-25 108
MS.gene038256.t1 AT3G22250 24.335 489 291 16 2 457 5 447 6.07e-25 107
MS.gene038256.t1 AT5G17040 29.537 281 154 8 205 476 94 339 3.31e-24 103
MS.gene038256.t1 AT1G50580 29.078 282 177 7 198 478 183 442 1.30e-23 103
MS.gene038256.t1 AT5G54060 25.691 362 222 11 125 470 128 458 4.75e-23 102
MS.gene038256.t1 AT3G29630 30.415 217 132 4 263 478 220 418 7.65e-23 100
MS.gene038256.t1 AT2G22930 26.923 286 184 7 188 472 174 435 1.88e-22 100
MS.gene038256.t1 AT4G09500 27.273 286 183 8 188 472 174 435 3.04e-21 96.3
MS.gene038256.t1 AT2G22590 29.643 280 162 13 205 477 218 469 2.13e-19 91.3
MS.gene038256.t1 AT4G09500 29.557 203 123 5 271 472 227 410 7.39e-19 89.0
MS.gene038256.t1 AT4G34135 25.664 339 201 11 2 308 8 327 9.17e-17 81.6

Find 139 sgRNAs with CRISPR-Local

Find 152 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGTAAACTTGTTAATTC+TGG 0.177497 5.4:-71538255 None:intergenic
TGGCTGGATGGGCTAGTATT+TGG 0.179284 5.4:-71538617 None:intergenic
GGATCTTCCTCCGCTTATTT+AGG 0.211918 5.4:+71538945 MS.gene038256:CDS
CGCCCTTTGGTGCTGGTTTA+CGG 0.221016 5.4:-71538482 None:intergenic
ACCAACGACGTCCTTGGTTT+TGG 0.255953 5.4:-71538313 None:intergenic
TGGAGATTGCGTTAGATTAT+AGG 0.260843 5.4:+71538778 MS.gene038256:CDS
CGAAACCTGGATTGGTGTTT+GGG 0.267641 5.4:-71537783 None:intergenic
CATAGGAACTGAAAATTCTT+TGG 0.273294 5.4:-71537944 None:intergenic
GGCTGGATGGGCTAGTATTT+GGG 0.276689 5.4:-71538616 None:intergenic
GCGAAACCTGGATTGGTGTT+TGG 0.277826 5.4:-71537784 None:intergenic
ACACTCGAGAGCATATATTT+TGG 0.279632 5.4:+71538675 MS.gene038256:CDS
TAATTCTGGATGAGAGAAAA+AGG 0.321943 5.4:-71538241 None:intergenic
GGTCCTACCGGATATATAAT+TGG 0.327216 5.4:-71538273 None:intergenic
ATGCTCGTCTTCTTCACTTC+TGG 0.341334 5.4:+71537964 MS.gene038256:CDS
GAGTAAGAAGACTTTGTTAG+AGG 0.346933 5.4:+71538920 MS.gene038256:CDS
ACAAGATTGAGAAAGGAATA+AGG 0.346991 5.4:+71538841 MS.gene038256:CDS
GGTGCAGCCATGGCGCCCTT+TGG 0.354904 5.4:-71538495 None:intergenic
GGAGATTGCGTTAGATTATA+GGG 0.355317 5.4:+71538779 MS.gene038256:CDS
CACTCTTTCTGATTTGTCTT+CGG 0.356173 5.4:+71538527 MS.gene038256:CDS
GAGACGGCTTGTTTGACATT+TGG 0.364960 5.4:-71537838 None:intergenic
TTGGGCTCAGGACTTAATAT+AGG 0.376863 5.4:-71538294 None:intergenic
GAAGAGATTGGAAGGGTGAT+TGG 0.383429 5.4:+71538579 MS.gene038256:CDS
GCCGCTCTTTGCTGAACAAC+AGG 0.402674 5.4:+71538716 MS.gene038256:CDS
ACTTCTGGCGTTGCTTCCCT+TGG 0.404828 5.4:+71537979 MS.gene038256:CDS
TTTCGATGAGGATCAGGTTA+AGG 0.406563 5.4:+71538410 MS.gene038256:CDS
TGATGATCAACCTCTTTCTT+CGG 0.406888 5.4:+71538356 MS.gene038256:CDS
GCCATGGCGCCCTTTGGTGC+TGG 0.409311 5.4:-71538489 None:intergenic
TTTCCTTCAAGCTCATTGCC+TGG 0.412932 5.4:+71538102 MS.gene038256:CDS
GCACGTGCTATTGAGAATAG+TGG 0.413591 5.4:+71538438 MS.gene038256:CDS
GTTCGATCTAAGAATCCTTC+AGG 0.418617 5.4:-71538555 None:intergenic
TTCTTTGGCAATATCAATCA+TGG 0.429997 5.4:-71537929 None:intergenic
TCAGCAGTCAAAAGATAGTT+AGG 0.433456 5.4:-71538819 None:intergenic
TTTCCTCTGCTTCGGGAGCA+GGG 0.434760 5.4:+71538383 MS.gene038256:CDS
GGGTTGTTTCGATGAGGATC+AGG 0.436263 5.4:+71538404 MS.gene038256:CDS
ACGGTTCCCATTCCTTGCTT+AGG 0.437414 5.4:-71538131 None:intergenic
TTAGATCGAACAGAAGAGAT+TGG 0.439066 5.4:+71538567 MS.gene038256:CDS
AGATTGGAAGGGTGATTGGT+TGG 0.443544 5.4:+71538583 MS.gene038256:CDS
AGATGGCTCACACCAGGAAA+AGG 0.452114 5.4:-71537592 None:intergenic
TGGATAAAGATGGAGAGTTC+AGG 0.459166 5.4:+71538871 MS.gene038256:CDS
AATCAACGTTGTCTCGTTCA+CGG 0.460721 5.4:-71538026 None:intergenic
GATTTGTTTCACATTGTGGC+TGG 0.462054 5.4:+71538646 MS.gene038256:CDS
ACTCAAGGGTGGAAACTAGA+TGG 0.462522 5.4:-71537609 None:intergenic
GCAGGCATGGCAGCGAAACC+TGG 0.467875 5.4:-71537796 None:intergenic
CATTTGGCTTATTAGCTTCG+AGG 0.469265 5.4:-71537822 None:intergenic
CAAATCCTCCTATGGCTGGA+TGG 0.469943 5.4:-71538629 None:intergenic
AAGTTTACCAATTATATATC+CGG 0.470055 5.4:+71538266 MS.gene038256:CDS
ATGTTGAGAGAATCTGAGAT+AGG 0.472899 5.4:-71537733 None:intergenic
CACGTGCTATTGAGAATAGT+GGG 0.476106 5.4:+71538439 MS.gene038256:CDS
AAGAGCGGCCATGTTGCAAT+GGG 0.477370 5.4:-71538702 None:intergenic
GATTGGAAGGGTGATTGGTT+GGG 0.479338 5.4:+71538584 MS.gene038256:CDS
GAAACAAGTTGGCGAAAGTC+GGG 0.480437 5.4:-71538083 None:intergenic
ACTGCTGACAAGATTGAGAA+AGG 0.482459 5.4:+71538834 MS.gene038256:CDS
AAAGAGCGGCCATGTTGCAA+TGG 0.492069 5.4:-71538703 None:intergenic
ACCAACGGAGGAGGAGAAAA+CGG 0.493615 5.4:+71537868 MS.gene038256:CDS
TTATTAGCTTCGAGGAGAGC+AGG 0.493961 5.4:-71537814 None:intergenic
TTCCGTCCTAAGCAAGGAAT+GGG 0.494431 5.4:+71538125 MS.gene038256:CDS
AGGAGTGTGTTGGATAAAGA+TGG 0.496217 5.4:+71538861 MS.gene038256:CDS
ATCAGAACCAACGACGTCCT+TGG 0.499220 5.4:-71538319 None:intergenic
AAATCCTCCTATGGCTGGAT+GGG 0.504130 5.4:-71538628 None:intergenic
TCCTTGCTTAGGACGGAACC+AGG 0.504593 5.4:-71538120 None:intergenic
ATGTGAAACAAATCCTCCTA+TGG 0.508233 5.4:-71538637 None:intergenic
GAAACAAATCCTCCTATGGC+TGG 0.509863 5.4:-71538633 None:intergenic
GAACCAGGCAATGAGCTTGA+AGG 0.510119 5.4:-71538105 None:intergenic
TGAGAGAATCTGAGATAGGA+AGG 0.511074 5.4:-71537729 None:intergenic
GGATAATTTGATTTCATACC+TGG 0.515494 5.4:-71538992 None:intergenic
GATGGCTCACACCAGGAAAA+GGG 0.527594 5.4:-71537591 None:intergenic
AGTAAGAAGACTTTGTTAGA+GGG 0.528649 5.4:+71538921 MS.gene038256:CDS
TTAGAAGCTTCGCGAACTCA+AGG 0.529238 5.4:-71537624 None:intergenic
GAAGTGAAGAAGACGAGCAT+AGG 0.529950 5.4:-71537961 None:intergenic
GGAAACAAGTTGGCGAAAGT+CGG 0.532089 5.4:-71538084 None:intergenic
GGAGGATTTGTTTCACATTG+TGG 0.532111 5.4:+71538642 MS.gene038256:CDS
AATTGATTATATTATGAACC+AGG 0.537333 5.4:+71538974 MS.gene038256:CDS
ATCGAACAGAAGAGATTGGA+AGG 0.539952 5.4:+71538571 MS.gene038256:CDS
CATGGCAGCGAAACCTGGAT+TGG 0.540033 5.4:-71537791 None:intergenic
TCCGTTGGTGAGGTTAGAGA+CGG 0.541299 5.4:-71537854 None:intergenic
TTCCTCTGCTTCGGGAGCAG+GGG 0.542311 5.4:+71538384 MS.gene038256:CDS
TCTCCGTAAACCAGCACCAA+AGG 0.545204 5.4:+71538479 MS.gene038256:CDS
AGCTTCGAGGAGAGCAGGCA+TGG 0.547186 5.4:-71537809 None:intergenic
TTCCCATTCCTTGCTTAGGA+CGG 0.548471 5.4:-71538127 None:intergenic
GTTCCGTCCTAAGCAAGGAA+TGG 0.548786 5.4:+71538124 MS.gene038256:CDS
TATAGGGTGGAGTATAACAC+TGG 0.553798 5.4:+71538795 MS.gene038256:CDS
CTCCGTAAACCAGCACCAAA+GGG 0.554136 5.4:+71538480 MS.gene038256:CDS
ATAGTGGGGCCCACTTCGTA+TGG 0.556188 5.4:+71538454 MS.gene038256:CDS
GAAAGGAATAAGGAGTGTGT+TGG 0.560047 5.4:+71538851 MS.gene038256:CDS
ACCAGCACCAAAGGGCGCCA+TGG 0.561112 5.4:+71538488 MS.gene038256:CDS
AAAATATATGCTCTCGAGTG+TGG 0.564548 5.4:-71538673 None:intergenic
GTAATCAGAGGGTGCAGCCA+TGG 0.564633 5.4:-71538505 None:intergenic
TGAATTTACTATAATGCCAT+CGG 0.564743 5.4:-71538187 None:intergenic
TGGGCTAGTATTTGGGCTTG+TGG 0.564992 5.4:-71538609 None:intergenic
AACGTTGTCTCGTTCACGGA+GGG 0.567366 5.4:-71538022 None:intergenic
GCCTGGTTCCGTCCTAAGCA+AGG 0.571149 5.4:+71538119 MS.gene038256:CDS
AACCCCTGCTCCCGAAGCAG+AGG 0.571541 5.4:-71538386 None:intergenic
AAGAAGACTTTGTTAGAGGG+TGG 0.571832 5.4:+71538924 MS.gene038256:CDS
ATACTAGCCCATCCAGCCAT+AGG 0.576286 5.4:+71538621 MS.gene038256:CDS
AATATGAAGATTCAAACCAA+GGG 0.577535 5.4:-71537995 None:intergenic
GGACTTAATATAGGTCCTAC+CGG 0.577656 5.4:-71538285 None:intergenic
TTTCTCCTCCTCCGTTGGTG+AGG 0.580297 5.4:-71537864 None:intergenic
CAAGATGAAGAAAGCACAAG+TGG 0.580545 5.4:+71537561 None:intergenic
TCTAACCTCACCAACGGAGG+AGG 0.582889 5.4:+71537859 MS.gene038256:CDS
AGGAAAACAACCGAAGAAAG+AGG 0.583095 5.4:-71538366 None:intergenic
TGAGCTTGAAGGAAACAAGT+TGG 0.586723 5.4:-71538094 None:intergenic
TAATGCCATCGGCATTCTTG+AGG 0.590477 5.4:-71538176 None:intergenic
GAAACTAGATGGCTCACACC+AGG 0.595763 5.4:-71537598 None:intergenic
GAATATGAAGATTCAAACCA+AGG 0.600487 5.4:-71537996 None:intergenic
CTAGCCCATCCAGCCATAGG+AGG 0.605139 5.4:+71538624 MS.gene038256:CDS
ATAATCTAACGCAATCTCCA+CGG 0.605174 5.4:-71538775 None:intergenic
TGTCAACAACGATGGTGGCA+AGG 0.606927 5.4:-71537894 None:intergenic
TAGAAGCTTCGCGAACTCAA+GGG 0.612789 5.4:-71537623 None:intergenic
TCAGAAAGAGTGTAATCAGA+GGG 0.616904 5.4:-71538516 None:intergenic
CCCAAAACCAAGGACGTCGT+TGG 0.622676 5.4:+71538312 MS.gene038256:CDS
TGATAACTAAAACAGTTACT+CGG 0.623393 5.4:-71537666 None:intergenic
ACCTGTTGTTCAGCAAAGAG+CGG 0.624299 5.4:-71538717 None:intergenic
GGGGAAGAGAAACTTCTGGA+AGG 0.625930 5.4:-71537762 None:intergenic
TTACCAATTATATATCCGGT+AGG 0.626274 5.4:+71538270 MS.gene038256:CDS
ATCAGAAAGAGTGTAATCAG+AGG 0.628293 5.4:-71538517 None:intergenic
AAAGGCCTCAAGAATGCCGA+TGG 0.630186 5.4:+71538171 MS.gene038256:CDS
CTAAAACAGTTACTCGGAGA+CGG 0.634129 5.4:-71537660 None:intergenic
AAACCTGGATTGGTGTTTGG+GGG 0.638767 5.4:-71537781 None:intergenic
TTGGTTCTGATATCATCAAG+TGG 0.641420 5.4:+71538331 MS.gene038256:CDS
GAGCAGGGGTTGTTTCGATG+AGG 0.641784 5.4:+71538398 MS.gene038256:CDS
AAGCTTCGCGAACTCAAGGG+TGG 0.644702 5.4:-71537620 None:intergenic
TTGGTGTGCCCATTGCAACA+TGG 0.646792 5.4:+71538694 MS.gene038256:CDS
TCGAACAGAAGAGATTGGAA+GGG 0.647010 5.4:+71538572 MS.gene038256:CDS
GAACATGTCAACAACGATGG+TGG 0.649630 5.4:-71537899 None:intergenic
GAAACCTGGATTGGTGTTTG+GGG 0.652318 5.4:-71537782 None:intergenic
TACGGAGAGACCATACGAAG+TGG 0.652787 5.4:-71538464 None:intergenic
TAAACGACCTAAATAAGCGG+AGG 0.660679 5.4:-71538952 None:intergenic
GATTGCGTTAGATTATAGGG+TGG 0.662057 5.4:+71538782 MS.gene038256:CDS
ACGGAGAGACCATACGAAGT+GGG 0.664679 5.4:-71538463 None:intergenic
GCCGTCTCTAACCTCACCAA+CGG 0.665676 5.4:+71537853 MS.gene038256:CDS
AATTAAACGACCTAAATAAG+CGG 0.667063 5.4:-71538955 None:intergenic
AAGTCCTGAGCCCAAAACCA+AGG 0.667222 5.4:+71538302 MS.gene038256:CDS
GTCTCTAACCTCACCAACGG+AGG 0.676529 5.4:+71537856 MS.gene038256:CDS
GTGTGAGTTGAAAATTGCCG+TGG 0.682153 5.4:+71538758 MS.gene038256:CDS
ATAGGGTGGAGTATAACACT+GGG 0.694439 5.4:+71538796 MS.gene038256:CDS
TTTGGCAATATCAATCATGG+TGG 0.713934 5.4:-71537926 None:intergenic
ACGTGCTATTGAGAATAGTG+GGG 0.719092 5.4:+71538440 MS.gene038256:CDS
CAACGTTGTCTCGTTCACGG+AGG 0.724627 5.4:-71538023 None:intergenic
GCAGAACATGTCAACAACGA+TGG 0.762589 5.4:-71537902 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTTACCAATTATATATC+CGG + chr5.4:71538266-71538285 MS.gene038256:CDS 20.0%
!! AATTGATTATATTATGAACC+AGG + chr5.4:71538974-71538993 MS.gene038256:CDS 20.0%
! AATATGAAGATTCAAACCAA+GGG - chr5.4:71537998-71538017 None:intergenic 25.0%
! AATTAAACGACCTAAATAAG+CGG - chr5.4:71538958-71538977 None:intergenic 25.0%
! TGAATTTACTATAATGCCAT+CGG - chr5.4:71538190-71538209 None:intergenic 25.0%
! TGATAACTAAAACAGTTACT+CGG - chr5.4:71537669-71537688 None:intergenic 25.0%
!!! ATTGGTAAACTTGTTAATTC+TGG - chr5.4:71538258-71538277 None:intergenic 25.0%
ACAAGATTGAGAAAGGAATA+AGG + chr5.4:71538841-71538860 MS.gene038256:CDS 30.0%
AGTAAGAAGACTTTGTTAGA+GGG + chr5.4:71538921-71538940 MS.gene038256:CDS 30.0%
CATAGGAACTGAAAATTCTT+TGG - chr5.4:71537947-71537966 None:intergenic 30.0%
GAATATGAAGATTCAAACCA+AGG - chr5.4:71537999-71538018 None:intergenic 30.0%
TAATTCTGGATGAGAGAAAA+AGG - chr5.4:71538244-71538263 None:intergenic 30.0%
TTACCAATTATATATCCGGT+AGG + chr5.4:71538270-71538289 MS.gene038256:CDS 30.0%
TTCTTTGGCAATATCAATCA+TGG - chr5.4:71537932-71537951 None:intergenic 30.0%
! ACAGGTTAATGCTTTTGAAT+TGG + chr5.4:71538734-71538753 MS.gene038256:CDS 30.0%
AAAATATATGCTCTCGAGTG+TGG - chr5.4:71538676-71538695 None:intergenic 35.0%
ATAATCTAACGCAATCTCCA+CGG - chr5.4:71538778-71538797 None:intergenic 35.0%
ATGTGAAACAAATCCTCCTA+TGG - chr5.4:71538640-71538659 None:intergenic 35.0%
GAGTAAGAAGACTTTGTTAG+AGG + chr5.4:71538920-71538939 MS.gene038256:CDS 35.0%
GGAGATTGCGTTAGATTATA+GGG + chr5.4:71538779-71538798 MS.gene038256:CDS 35.0%
TCAGCAGTCAAAAGATAGTT+AGG - chr5.4:71538822-71538841 None:intergenic 35.0%
TGATGATCAACCTCTTTCTT+CGG + chr5.4:71538356-71538375 MS.gene038256:CDS 35.0%
TGGAGATTGCGTTAGATTAT+AGG + chr5.4:71538778-71538797 MS.gene038256:CDS 35.0%
TTAGATCGAACAGAAGAGAT+TGG + chr5.4:71538567-71538586 MS.gene038256:CDS 35.0%
TTTACGAAGCTCGTGAAAAA+CGG - chr5.4:71538153-71538172 None:intergenic 35.0%
TTTGGCAATATCAATCATGG+TGG - chr5.4:71537929-71537948 None:intergenic 35.0%
! ACATCGTTTTCTGTTATGTG+TGG - chr5.4:71537697-71537716 None:intergenic 35.0%
! ATCAGAAAGAGTGTAATCAG+AGG - chr5.4:71538520-71538539 None:intergenic 35.0%
! ATGTTGAGAGAATCTGAGAT+AGG - chr5.4:71537736-71537755 None:intergenic 35.0%
! CACTCTTTCTGATTTGTCTT+CGG + chr5.4:71538527-71538546 MS.gene038256:CDS 35.0%
! CATCGTTTTCTGTTATGTGT+GGG - chr5.4:71537696-71537715 None:intergenic 35.0%
! TCAGAAAGAGTGTAATCAGA+GGG - chr5.4:71538519-71538538 None:intergenic 35.0%
! TTTTTCACGAGCTTCGTAAA+AGG + chr5.4:71538153-71538172 MS.gene038256:CDS 35.0%
!! ACACTCGAGAGCATATATTT+TGG + chr5.4:71538675-71538694 MS.gene038256:CDS 35.0%
!! TTGGTTCTGATATCATCAAG+TGG + chr5.4:71538331-71538350 MS.gene038256:CDS 35.0%
AAGAAGACTTTGTTAGAGGG+TGG + chr5.4:71538924-71538943 MS.gene038256:CDS 40.0%
AATCAACGTTGTCTCGTTCA+CGG - chr5.4:71538029-71538048 None:intergenic 40.0%
ACTGCTGACAAGATTGAGAA+AGG + chr5.4:71538834-71538853 MS.gene038256:CDS 40.0%
AGGAAAACAACCGAAGAAAG+AGG - chr5.4:71538369-71538388 None:intergenic 40.0%
ATAGGGTGGAGTATAACACT+GGG + chr5.4:71538796-71538815 MS.gene038256:CDS 40.0%
ATCGAACAGAAGAGATTGGA+AGG + chr5.4:71538571-71538590 MS.gene038256:CDS 40.0%
CTAAAACAGTTACTCGGAGA+CGG - chr5.4:71537663-71537682 None:intergenic 40.0%
GATTGCGTTAGATTATAGGG+TGG + chr5.4:71538782-71538801 MS.gene038256:CDS 40.0%
GGACTTAATATAGGTCCTAC+CGG - chr5.4:71538288-71538307 None:intergenic 40.0%
GGTCCTACCGGATATATAAT+TGG - chr5.4:71538276-71538295 None:intergenic 40.0%
GTTCGATCTAAGAATCCTTC+AGG - chr5.4:71538558-71538577 None:intergenic 40.0%
TAAACGACCTAAATAAGCGG+AGG - chr5.4:71538955-71538974 None:intergenic 40.0%
TATAGGGTGGAGTATAACAC+TGG + chr5.4:71538795-71538814 MS.gene038256:CDS 40.0%
TCGAACAGAAGAGATTGGAA+GGG + chr5.4:71538572-71538591 MS.gene038256:CDS 40.0%
TGAGCTTGAAGGAAACAAGT+TGG - chr5.4:71538097-71538116 None:intergenic 40.0%
TGGATAAAGATGGAGAGTTC+AGG + chr5.4:71538871-71538890 MS.gene038256:CDS 40.0%
TTGGGCTCAGGACTTAATAT+AGG - chr5.4:71538297-71538316 None:intergenic 40.0%
TTTCGATGAGGATCAGGTTA+AGG + chr5.4:71538410-71538429 MS.gene038256:CDS 40.0%
! ACGTGCTATTGAGAATAGTG+GGG + chr5.4:71538440-71538459 MS.gene038256:CDS 40.0%
! AGGAGTGTGTTGGATAAAGA+TGG + chr5.4:71538861-71538880 MS.gene038256:CDS 40.0%
! CACGTGCTATTGAGAATAGT+GGG + chr5.4:71538439-71538458 MS.gene038256:CDS 40.0%
! CATTTGGCTTATTAGCTTCG+AGG - chr5.4:71537825-71537844 None:intergenic 40.0%
! GAAAGGAATAAGGAGTGTGT+TGG + chr5.4:71538851-71538870 MS.gene038256:CDS 40.0%
! GATTTGTTTCACATTGTGGC+TGG + chr5.4:71538646-71538665 MS.gene038256:CDS 40.0%
! GGAGGATTTGTTTCACATTG+TGG + chr5.4:71538642-71538661 MS.gene038256:CDS 40.0%
! TGAGAGAATCTGAGATAGGA+AGG - chr5.4:71537732-71537751 None:intergenic 40.0%
! TTGTCTTCGGTTTTACCTGA+AGG + chr5.4:71538540-71538559 MS.gene038256:CDS 40.0%
AAATCCTCCTATGGCTGGAT+GGG - chr5.4:71538631-71538650 None:intergenic 45.0%
ACCTGTTGTTCAGCAAAGAG+CGG - chr5.4:71538720-71538739 None:intergenic 45.0%
ACTCAAGGGTGGAAACTAGA+TGG - chr5.4:71537612-71537631 None:intergenic 45.0%
AGATTGGAAGGGTGATTGGT+TGG + chr5.4:71538583-71538602 MS.gene038256:CDS 45.0%
ATGCTCGTCTTCTTCACTTC+TGG + chr5.4:71537964-71537983 MS.gene038256:CDS 45.0%
GAAACAAATCCTCCTATGGC+TGG - chr5.4:71538636-71538655 None:intergenic 45.0%
GAACATGTCAACAACGATGG+TGG - chr5.4:71537902-71537921 None:intergenic 45.0%
GAAGAGATTGGAAGGGTGAT+TGG + chr5.4:71538579-71538598 MS.gene038256:CDS 45.0%
GAAGTGAAGAAGACGAGCAT+AGG - chr5.4:71537964-71537983 None:intergenic 45.0%
GCAGAACATGTCAACAACGA+TGG - chr5.4:71537905-71537924 None:intergenic 45.0%
GGATCTTCCTCCGCTTATTT+AGG + chr5.4:71538945-71538964 MS.gene038256:CDS 45.0%
TAATGCCATCGGCATTCTTG+AGG - chr5.4:71538179-71538198 None:intergenic 45.0%
TAGAAGCTTCGCGAACTCAA+GGG - chr5.4:71537626-71537645 None:intergenic 45.0%
TTAGAAGCTTCGCGAACTCA+AGG - chr5.4:71537627-71537646 None:intergenic 45.0%
TTCCCATTCCTTGCTTAGGA+CGG - chr5.4:71538130-71538149 None:intergenic 45.0%
TTCCGTCCTAAGCAAGGAAT+GGG + chr5.4:71538125-71538144 MS.gene038256:CDS 45.0%
TTTCCTTCAAGCTCATTGCC+TGG + chr5.4:71538102-71538121 MS.gene038256:CDS 45.0%
TTTGGGGGAAGAGAAACTTC+TGG - chr5.4:71537769-71537788 None:intergenic 45.0%
! GAAACAAGTTGGCGAAAGTC+GGG - chr5.4:71538086-71538105 None:intergenic 45.0%
! GAGACGGCTTGTTTGACATT+TGG - chr5.4:71537841-71537860 None:intergenic 45.0%
! GATTGGAAGGGTGATTGGTT+GGG + chr5.4:71538584-71538603 MS.gene038256:CDS 45.0%
! GCACGTGCTATTGAGAATAG+TGG + chr5.4:71538438-71538457 MS.gene038256:CDS 45.0%
! GGAAACAAGTTGGCGAAAGT+CGG - chr5.4:71538087-71538106 None:intergenic 45.0%
! GTGGTGTTTATCCCTTTTCC+TGG + chr5.4:71537580-71537599 MS.gene038256:CDS 45.0%
! GTGTGAGTTGAAAATTGCCG+TGG + chr5.4:71538758-71538777 MS.gene038256:CDS 45.0%
! TTATTAGCTTCGAGGAGAGC+AGG - chr5.4:71537817-71537836 None:intergenic 45.0%
!! AAACCTGGATTGGTGTTTGG+GGG - chr5.4:71537784-71537803 None:intergenic 45.0%
!! CGAAACCTGGATTGGTGTTT+GGG - chr5.4:71537786-71537805 None:intergenic 45.0%
!! GAAACCTGGATTGGTGTTTG+GGG - chr5.4:71537785-71537804 None:intergenic 45.0%
!! TCGGTTGTTTTCCTCTGCTT+CGG + chr5.4:71538375-71538394 MS.gene038256:CDS 45.0%
AAAGAGCGGCCATGTTGCAA+TGG - chr5.4:71538706-71538725 None:intergenic 50.0%
AAAGGCCTCAAGAATGCCGA+TGG + chr5.4:71538171-71538190 MS.gene038256:CDS 50.0%
AACGTTGTCTCGTTCACGGA+GGG - chr5.4:71538025-71538044 None:intergenic 50.0%
AAGAGCGGCCATGTTGCAAT+GGG - chr5.4:71538705-71538724 None:intergenic 50.0%
AAGTCCTGAGCCCAAAACCA+AGG + chr5.4:71538302-71538321 MS.gene038256:CDS 50.0%
ACCAACGGAGGAGGAGAAAA+CGG + chr5.4:71537868-71537887 MS.gene038256:CDS 50.0%
ACGGAGAGACCATACGAAGT+GGG - chr5.4:71538466-71538485 None:intergenic 50.0%
ACGGTTCCCATTCCTTGCTT+AGG - chr5.4:71538134-71538153 None:intergenic 50.0%
AGATGGCTCACACCAGGAAA+AGG - chr5.4:71537595-71537614 None:intergenic 50.0%
ATACTAGCCCATCCAGCCAT+AGG + chr5.4:71538621-71538640 MS.gene038256:CDS 50.0%
ATCAGAACCAACGACGTCCT+TGG - chr5.4:71538322-71538341 None:intergenic 50.0%
CAAATCCTCCTATGGCTGGA+TGG - chr5.4:71538632-71538651 None:intergenic 50.0%
CTCCGTAAACCAGCACCAAA+GGG + chr5.4:71538480-71538499 MS.gene038256:CDS 50.0%
GAAACTAGATGGCTCACACC+AGG - chr5.4:71537601-71537620 None:intergenic 50.0%
GAACCAGGCAATGAGCTTGA+AGG - chr5.4:71538108-71538127 None:intergenic 50.0%
GATGGCTCACACCAGGAAAA+GGG - chr5.4:71537594-71537613 None:intergenic 50.0%
GGGGAAGAGAAACTTCTGGA+AGG - chr5.4:71537765-71537784 None:intergenic 50.0%
GTTCCGTCCTAAGCAAGGAA+TGG + chr5.4:71538124-71538143 MS.gene038256:CDS 50.0%
TACGGAGAGACCATACGAAG+TGG - chr5.4:71538467-71538486 None:intergenic 50.0%
TCTCCGTAAACCAGCACCAA+AGG + chr5.4:71538479-71538498 MS.gene038256:CDS 50.0%
TTGGTGTGCCCATTGCAACA+TGG + chr5.4:71538694-71538713 MS.gene038256:CDS 50.0%
! ACCAACGACGTCCTTGGTTT+TGG - chr5.4:71538316-71538335 None:intergenic 50.0%
! GGGTTGTTTCGATGAGGATC+AGG + chr5.4:71538404-71538423 MS.gene038256:CDS 50.0%
! TCCGTTGGTGAGGTTAGAGA+CGG - chr5.4:71537857-71537876 None:intergenic 50.0%
! TGTCAACAACGATGGTGGCA+AGG - chr5.4:71537897-71537916 None:intergenic 50.0%
!! CCAACGACGTCCTTGGTTTT+GGG - chr5.4:71538315-71538334 None:intergenic 50.0%
!! CGGTTGTTTTCCTCTGCTTC+GGG + chr5.4:71538376-71538395 MS.gene038256:CDS 50.0%
!! GCGAAACCTGGATTGGTGTT+TGG - chr5.4:71537787-71537806 None:intergenic 50.0%
!! GGCTGGATGGGCTAGTATTT+GGG - chr5.4:71538619-71538638 None:intergenic 50.0%
!! TGGCTGGATGGGCTAGTATT+TGG - chr5.4:71538620-71538639 None:intergenic 50.0%
!! TGGGCTAGTATTTGGGCTTG+TGG - chr5.4:71538612-71538631 None:intergenic 50.0%
AAGCTTCGCGAACTCAAGGG+TGG - chr5.4:71537623-71537642 None:intergenic 55.0%
ACTTCTGGCGTTGCTTCCCT+TGG + chr5.4:71537979-71537998 MS.gene038256:CDS 55.0%
CAACGTTGTCTCGTTCACGG+AGG - chr5.4:71538026-71538045 None:intergenic 55.0%
CATGGCAGCGAAACCTGGAT+TGG - chr5.4:71537794-71537813 None:intergenic 55.0%
CCCAAAACCAAGGACGTCGT+TGG + chr5.4:71538312-71538331 MS.gene038256:CDS 55.0%
CTTCCCCCAAACACCAATCC+AGG + chr5.4:71537778-71537797 MS.gene038256:CDS 55.0%
GCCGCTCTTTGCTGAACAAC+AGG + chr5.4:71538716-71538735 MS.gene038256:CDS 55.0%
GCCGTCTCTAACCTCACCAA+CGG + chr5.4:71537853-71537872 MS.gene038256:CDS 55.0%
GTCTCTAACCTCACCAACGG+AGG + chr5.4:71537856-71537875 MS.gene038256:CDS 55.0%
TCCTTGCTTAGGACGGAACC+AGG - chr5.4:71538123-71538142 None:intergenic 55.0%
TCTAACCTCACCAACGGAGG+AGG + chr5.4:71537859-71537878 MS.gene038256:CDS 55.0%
TTTCCTCTGCTTCGGGAGCA+GGG + chr5.4:71538383-71538402 MS.gene038256:CDS 55.0%
TTTCTCCTCCTCCGTTGGTG+AGG - chr5.4:71537867-71537886 None:intergenic 55.0%
! ATAGTGGGGCCCACTTCGTA+TGG + chr5.4:71538454-71538473 MS.gene038256:CDS 55.0%
! GAGCAGGGGTTGTTTCGATG+AGG + chr5.4:71538398-71538417 MS.gene038256:CDS 55.0%
! GTAATCAGAGGGTGCAGCCA+TGG - chr5.4:71538508-71538527 None:intergenic 55.0%
! TCCGTTTTCTCCTCCTCCGT+TGG - chr5.4:71537872-71537891 None:intergenic 55.0%
! TTTTCCTCTGCTTCGGGAGC+AGG + chr5.4:71538382-71538401 MS.gene038256:CDS 55.0%
!! CGCCCTTTGGTGCTGGTTTA+CGG - chr5.4:71538485-71538504 None:intergenic 55.0%
!!! ACGTCCTTGGTTTTGGGCTC+AGG - chr5.4:71538309-71538328 None:intergenic 55.0%
AGCTTCGAGGAGAGCAGGCA+TGG - chr5.4:71537812-71537831 None:intergenic 60.0%
CTAGCCCATCCAGCCATAGG+AGG + chr5.4:71538624-71538643 MS.gene038256:CDS 60.0%
GCCTGGTTCCGTCCTAAGCA+AGG + chr5.4:71538119-71538138 MS.gene038256:CDS 60.0%
TTCCTCTGCTTCGGGAGCAG+GGG + chr5.4:71538384-71538403 MS.gene038256:CDS 60.0%
AACCCCTGCTCCCGAAGCAG+AGG - chr5.4:71538389-71538408 None:intergenic 65.0%
GCAGGCATGGCAGCGAAACC+TGG - chr5.4:71537799-71537818 None:intergenic 65.0%
!! ACCAGCACCAAAGGGCGCCA+TGG + chr5.4:71538488-71538507 MS.gene038256:CDS 65.0%
GGTGCAGCCATGGCGCCCTT+TGG - chr5.4:71538498-71538517 None:intergenic 70.0%
! GCCATGGCGCCCTTTGGTGC+TGG - chr5.4:71538492-71538511 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 71537565 71539001 71537565 ID=MS.gene038256
chr5.4 mRNA 71537565 71539001 71537565 ID=MS.gene038256.t1;Parent=MS.gene038256
chr5.4 exon 71537565 71539001 71537565 ID=MS.gene038256.t1.exon1;Parent=MS.gene038256.t1
chr5.4 CDS 71537565 71539001 71537565 ID=cds.MS.gene038256.t1;Parent=MS.gene038256.t1
Gene Sequence

>MS.gene038256

ATGAAGAAAGCACAAGTGGTGTTTATCCCTTTTCCTGGTGTGAGCCATCTAGTTTCCACCCTTGAGTTCGCGAAGCTTCTAATCAATCGTGATAACCGTCTCCGAGTAACTGTTTTAGTTATCAAATTCCCACACATAACAGAAAACGATGTCAGCACTAAATTCCTTCCTATCTCAGATTCTCTCAACATCATCAACCTTCCAGAAGTTTCTCTTCCCCCAAACACCAATCCAGGTTTCGCTGCCATGCCTGCTCTCCTCGAAGCTAATAAGCCAAATGTCAAACAAGCCGTCTCTAACCTCACCAACGGAGGAGGAGAAAACGGAGTCCTTGCCACCATCGTTGTTGACATGTTCTGCACCACCATGATTGATATTGCCAAAGAATTTTCAGTTCCTATGCTCGTCTTCTTCACTTCTGGCGTTGCTTCCCTTGGTTTGAATCTTCATATTCATACCCTCCGTGAACGAGACAACGTTGATTCAATTCAGTTGCAGCAGCAGAAAGAGTTAGTCATCCCGACTTTCGCCAACTTGTTTCCTTCAAGCTCATTGCCTGGTTCCGTCCTAAGCAAGGAATGGGAACCGTTTTTCACGAGCTTCGTAAAAGGCCTCAAGAATGCCGATGGCATTATAGTAAATTCATTTGAAGAGCTAGAATCACACGCGATTCACTCCTTTTTCTCTCATCCAGAATTAACAAGTTTACCAATTATATATCCGGTAGGACCTATATTAAGTCCTGAGCCCAAAACCAAGGACGTCGTTGGTTCTGATATCATCAAGTGGCTTGATGATCAACCTCTTTCTTCGGTTGTTTTCCTCTGCTTCGGGAGCAGGGGTTGTTTCGATGAGGATCAGGTTAAGGAGATCGCACGTGCTATTGAGAATAGTGGGGCCCACTTCGTATGGTCTCTCCGTAAACCAGCACCAAAGGGCGCCATGGCTGCACCCTCTGATTACACTCTTTCTGATTTGTCTTCGGTTTTACCTGAAGGATTCTTAGATCGAACAGAAGAGATTGGAAGGGTGATTGGTTGGGCGCCACAAGCCCAAATACTAGCCCATCCAGCCATAGGAGGATTTGTTTCACATTGTGGCTGGAATTCCACACTCGAGAGCATATATTTTGGTGTGCCCATTGCAACATGGCCGCTCTTTGCTGAACAACAGGTTAATGCTTTTGAATTGGTGTGTGAGTTGAAAATTGCCGTGGAGATTGCGTTAGATTATAGGGTGGAGTATAACACTGGGCCTAACTATCTTTTGACTGCTGACAAGATTGAGAAAGGAATAAGGAGTGTGTTGGATAAAGATGGAGAGTTCAGGAAAAAAGTGAAAGAGATGAGTGAAAAGAGTAAGAAGACTTTGTTAGAGGGTGGATCTTCCTCCGCTTATTTAGGTCGTTTAATTGATTATATTATGAACCAGGTATGA
Protein sequence

>MS.gene038256.t1

MKKAQVVFIPFPGVSHLVSTLEFAKLLINRDNRLRVTVLVIKFPHITENDVSTKFLPISDSLNIINLPEVSLPPNTNPGFAAMPALLEANKPNVKQAVSNLTNGGGENGVLATIVVDMFCTTMIDIAKEFSVPMLVFFTSGVASLGLNLHIHTLRERDNVDSIQLQQQKELVIPTFANLFPSSSLPGSVLSKEWEPFFTSFVKGLKNADGIIVNSFEELESHAIHSFFSHPELTSLPIIYPVGPILSPEPKTKDVVGSDIIKWLDDQPLSSVVFLCFGSRGCFDEDQVKEIARAIENSGAHFVWSLRKPAPKGAMAAPSDYTLSDLSSVLPEGFLDRTEEIGRVIGWAPQAQILAHPAIGGFVSHCGWNSTLESIYFGVPIATWPLFAEQQVNAFELVCELKIAVEIALDYRVEYNTGPNYLLTADKIEKGIRSVLDKDGEFRKKVKEMSEKSKKTLLEGGSSSAYLGRLIDYIMNQV