AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017043

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017043.t1 MTR_5g090620 96.033 479 18 1 1 478 1 479 0.0 951
MS.gene017043.t1 MTR_5g090580 78.333 480 100 4 1 478 1 478 0.0 769
MS.gene017043.t1 MTR_5g090700 77.593 482 102 4 1 478 1 480 0.0 764
MS.gene017043.t1 MTR_5g090670 76.763 482 106 5 1 478 1 480 0.0 757
MS.gene017043.t1 MTR_5g090630 76.360 478 104 3 1 478 1 469 0.0 746
MS.gene017043.t1 MTR_5g090660 74.423 477 120 2 1 477 1 475 0.0 739
MS.gene017043.t1 MTR_5g090610 73.640 478 112 3 1 478 1 464 0.0 720
MS.gene017043.t1 MTR_5g090600 73.222 478 107 3 1 478 1 457 0.0 704
MS.gene017043.t1 MTR_5g098930 66.183 482 148 8 1 478 1 471 0.0 626
MS.gene017043.t1 MTR_5g090690 60.533 413 98 6 65 468 18 374 3.07e-154 444
MS.gene017043.t1 MTR_5g090650 64.773 352 91 4 1 352 1 319 2.18e-151 434
MS.gene017043.t1 MTR_2g040530 42.857 483 242 13 1 471 1 461 3.85e-120 360
MS.gene017043.t1 MTR_5g070040 41.803 488 242 17 2 475 8 467 1.81e-117 353
MS.gene017043.t1 MTR_2g046820 42.355 484 243 14 1 472 1 460 2.34e-117 352
MS.gene017043.t1 MTR_2g046750 41.856 485 247 15 1 472 1 463 7.99e-117 351
MS.gene017043.t1 MTR_5g070090 41.031 485 243 12 2 474 8 461 7.13e-115 346
MS.gene017043.t1 MTR_6g488280 35.246 488 265 18 3 470 4 460 4.57e-75 243
MS.gene017043.t1 MTR_0428s0010 35.246 488 265 18 3 470 4 460 4.57e-75 243
MS.gene017043.t1 MTR_3g009510 33.198 491 290 16 1 471 1 473 2.58e-74 242
MS.gene017043.t1 MTR_8g465670 34.156 486 282 14 2 471 4 467 4.02e-74 241
MS.gene017043.t1 MTR_6g023665 34.855 482 277 15 2 470 10 467 6.22e-74 241
MS.gene017043.t1 MTR_7g117170 34.583 480 275 15 6 470 16 471 2.16e-72 237
MS.gene017043.t1 MTR_8g006220 33.603 494 283 15 2 471 3 475 4.09e-72 236
MS.gene017043.t1 MTR_8g027870 34.316 475 277 15 6 470 19 468 2.93e-69 229
MS.gene017043.t1 MTR_8g006730 31.601 481 296 13 2 470 3 462 4.22e-69 228
MS.gene017043.t1 MTR_8g006710 31.352 488 299 14 2 476 3 467 8.10e-67 222
MS.gene017043.t1 MTR_8g027885 34.172 477 275 17 6 470 19 468 1.18e-66 222
MS.gene017043.t1 MTR_8g006270 32.225 481 292 12 2 471 3 460 4.34e-66 220
MS.gene017043.t1 MTR_8g009073 33.402 485 280 17 2 470 3 460 7.42e-66 219
MS.gene017043.t1 MTR_6g033675 29.939 491 293 12 3 472 2 462 1.02e-65 219
MS.gene017043.t1 MTR_8g006260 34.433 485 264 21 3 463 4 458 1.34e-65 219
MS.gene017043.t1 MTR_0184s0040 32.365 482 290 14 2 470 18 476 1.41e-65 219
MS.gene017043.t1 MTR_0078s0190 32.365 482 290 14 2 470 18 476 1.41e-65 219
MS.gene017043.t1 MTR_0184s0030 30.737 475 295 15 2 463 3 456 3.10e-65 218
MS.gene017043.t1 MTR_0078s0010 31.250 480 299 15 2 470 3 462 1.75e-64 216
MS.gene017043.t1 MTR_6g005600 32.365 482 290 16 3 470 4 463 1.42e-63 214
MS.gene017043.t1 MTR_8g008970 33.402 485 280 17 2 470 3 460 1.97e-63 220
MS.gene017043.t1 MTR_8g008970 34.173 278 153 8 196 470 534 784 4.15e-36 142
MS.gene017043.t1 MTR_0078s0060 33.198 494 281 19 2 474 3 468 2.74e-63 213
MS.gene017043.t1 MTR_8g009067 32.922 486 283 16 2 471 3 461 7.25e-63 212
MS.gene017043.t1 MTR_8g077590 31.911 492 273 17 4 470 8 462 3.87e-62 209
MS.gene017043.t1 MTR_7g047030 31.743 482 294 16 2 470 3 462 4.40e-62 209
MS.gene017043.t1 MTR_7g047270 31.743 482 294 16 2 470 3 462 4.40e-62 209
MS.gene017043.t1 MTR_8g074550 31.176 510 294 19 2 474 5 494 3.21e-61 208
MS.gene017043.t1 MTR_8g009055 31.458 480 298 13 2 470 3 462 7.83e-61 206
MS.gene017043.t1 MTR_8g009063 30.962 478 303 12 2 470 10 469 6.70e-60 204
MS.gene017043.t1 MTR_5g019580 30.832 493 295 16 2 470 4 474 7.70e-60 204
MS.gene017043.t1 MTR_8g009050 32.573 482 290 17 2 470 3 462 1.62e-59 202
MS.gene017043.t1 MTR_1g019510 31.535 482 292 15 2 470 3 459 1.91e-59 202
MS.gene017043.t1 MTR_6g033625 29.532 491 291 14 3 470 2 460 2.71e-59 202
MS.gene017043.t1 MTR_8g012635 29.560 477 302 15 2 463 3 460 2.89e-58 199
MS.gene017043.t1 MTR_6g033725 29.388 490 294 13 3 472 2 459 3.12e-58 199
MS.gene017043.t1 MTR_8g008990 31.950 482 295 15 2 470 3 464 3.22e-58 199
MS.gene017043.t1 MTR_8g012745 29.684 475 301 15 2 463 3 457 9.29e-58 198
MS.gene017043.t1 MTR_6g033615 30.992 484 279 14 3 470 2 446 6.07e-57 196
MS.gene017043.t1 MTR_7g046490 30.185 487 294 17 2 471 3 460 1.50e-56 195
MS.gene017043.t1 MTR_6g033660 28.893 488 295 13 6 472 5 461 1.78e-56 195
MS.gene017043.t1 MTR_8g012650 28.884 502 292 16 2 471 3 471 1.90e-55 192
MS.gene017043.t1 MTR_8g066610 31.365 491 288 16 6 472 10 475 2.00e-53 187
MS.gene017043.t1 MTR_3g479520 29.515 515 283 17 2 477 12 485 5.51e-53 186
MS.gene017043.t1 MTR_8g009067 33.611 360 213 10 120 471 2 343 1.01e-52 181
MS.gene017043.t1 MTR_0536s0020 28.687 495 297 16 2 472 15 477 2.27e-52 184
MS.gene017043.t1 MTR_5g019580 30.061 489 276 17 2 470 56 498 9.05e-52 183
MS.gene017043.t1 MTR_8g009073 35.043 351 194 13 132 470 3 331 6.10e-51 176
MS.gene017043.t1 MTR_4g117890 26.547 501 304 16 2 474 10 474 6.07e-50 177
MS.gene017043.t1 MTR_4g485630 28.370 497 299 17 2 472 6 471 8.95e-50 177
MS.gene017043.t1 MTR_7g102550 29.719 498 291 17 7 471 11 482 5.98e-49 175
MS.gene017043.t1 MTR_5g029800 28.773 497 297 19 5 474 11 477 6.48e-49 175
MS.gene017043.t1 MTR_7g102460 28.373 504 309 15 3 477 7 487 1.39e-48 174
MS.gene017043.t1 MTR_4g095008 30.769 403 236 12 87 475 92 465 1.94e-47 172
MS.gene017043.t1 MTR_4g117960 26.477 491 309 17 8 472 14 478 6.18e-47 169
MS.gene017043.t1 MTR_3g069710 28.831 496 281 14 2 476 9 453 1.33e-46 168
MS.gene017043.t1 MTR_6g035185 27.510 498 297 19 8 472 14 480 3.30e-46 167
MS.gene017043.t1 MTR_7g012120 27.984 486 312 14 5 472 16 481 4.62e-46 167
MS.gene017043.t1 MTR_5g067170 27.959 490 302 17 8 472 14 477 5.90e-46 167
MS.gene017043.t1 MTR_7g102490 29.273 509 300 18 3 477 7 489 6.48e-46 167
MS.gene017043.t1 MTR_2g034990 28.571 504 289 22 5 472 11 479 7.49e-46 167
MS.gene017043.t1 MTR_4g117980 28.889 495 293 18 8 472 14 479 1.05e-45 166
MS.gene017043.t1 MTR_4g118000 28.831 496 286 21 8 477 15 469 1.19e-45 166
MS.gene017043.t1 MTR_8g012730 34.286 280 136 8 194 462 54 296 1.56e-45 161
MS.gene017043.t1 MTR_4g094920 27.992 493 295 15 5 475 26 480 1.88e-45 166
MS.gene017043.t1 MTR_7g102450 27.621 496 300 17 7 477 13 474 7.50e-45 164
MS.gene017043.t1 MTR_3g069690 27.075 506 283 16 2 478 5 453 1.55e-44 162
MS.gene017043.t1 MTR_5g035580 26.453 499 282 16 6 476 14 455 1.62e-44 162
MS.gene017043.t1 MTR_1g062380 27.219 507 305 18 6 476 17 495 2.32e-44 162
MS.gene017043.t1 MTR_1g107360 27.126 494 301 17 5 477 9 464 2.83e-44 162
MS.gene017043.t1 MTR_4g485620 27.033 492 277 16 20 472 4 452 3.59e-44 161
MS.gene017043.t1 MTR_3g079480 28.016 514 292 16 2 477 18 491 4.05e-44 162
MS.gene017043.t1 MTR_5g087620 26.641 518 308 17 2 478 7 493 4.28e-44 162
MS.gene017043.t1 MTR_6g014290 24.462 511 315 12 2 477 7 481 4.67e-44 161
MS.gene017043.t1 MTR_5g464760 27.647 510 292 13 3 478 10 476 6.12e-44 161
MS.gene017043.t1 MTR_2g035020 27.888 502 295 21 5 472 11 479 8.31e-44 161
MS.gene017043.t1 MTR_0536s0010 26.884 491 305 16 2 472 18 474 1.27e-43 160
MS.gene017043.t1 MTR_7g070800 28.119 505 287 20 6 472 7 473 1.50e-43 160
MS.gene017043.t1 MTR_1g107350 30.025 393 230 13 90 467 99 461 1.56e-43 160
MS.gene017043.t1 MTR_4g117950 29.175 497 287 17 2 472 3 460 1.75e-43 160
MS.gene017043.t1 MTR_5g045970 25.977 512 304 20 6 476 17 494 2.45e-43 160
MS.gene017043.t1 MTR_7g070940 28.163 490 308 16 2 472 6 470 2.60e-43 159
MS.gene017043.t1 MTR_6g035265 26.283 487 308 14 8 472 14 471 2.62e-43 159
MS.gene017043.t1 MTR_5g072810 25.773 485 304 13 4 474 11 453 4.27e-43 158
MS.gene017043.t1 MTR_6g014220 25.926 513 292 16 2 471 7 474 5.98e-43 158
MS.gene017043.t1 MTR_8g064880 29.047 451 267 16 6 432 10 431 7.77e-43 158
MS.gene017043.t1 MTR_7g070860 27.606 518 267 20 2 472 4 460 7.91e-43 158
MS.gene017043.t1 MTR_4g094220 25.049 515 296 16 3 471 5 475 8.63e-43 158
MS.gene017043.t1 MTR_4g024020 26.627 507 313 13 3 475 7 488 9.25e-43 158
MS.gene017043.t1 MTR_7g080900 25.153 489 304 15 2 472 9 453 1.23e-42 157
MS.gene017043.t1 MTR_7g070740 28.543 508 290 19 3 472 9 481 1.24e-42 158
MS.gene017043.t1 MTR_5g016660 27.843 510 290 15 3 471 8 480 1.51e-42 157
MS.gene017043.t1 MTR_2g098430 27.579 504 304 19 2 474 3 476 1.55e-42 157
MS.gene017043.t1 MTR_1g019520 40.367 218 114 6 258 470 2 208 1.83e-42 150
MS.gene017043.t1 MTR_7g071040 26.863 510 297 17 3 472 15 488 1.94e-42 157
MS.gene017043.t1 MTR_3g008010 25.889 506 299 14 3 471 8 474 2.08e-42 157
MS.gene017043.t1 MTR_8g064870 26.626 492 310 16 5 474 11 473 2.58e-42 157
MS.gene017043.t1 MTR_3g479490 26.931 505 297 16 2 471 3 470 2.71e-42 157
MS.gene017043.t1 MTR_5g045960 27.485 513 305 19 2 477 6 488 3.15e-42 157
MS.gene017043.t1 MTR_6g078320 28.306 484 296 16 4 462 10 467 4.32e-42 156
MS.gene017043.t1 MTR_7g070610 27.607 489 314 16 6 472 14 484 5.03e-42 156
MS.gene017043.t1 MTR_2g035040 28.497 386 241 14 107 472 14 384 5.49e-42 154
MS.gene017043.t1 MTR_8g012630 40.187 214 105 8 260 463 204 404 7.66e-42 154
MS.gene017043.t1 MTR_7g070660 27.347 490 309 16 6 472 12 477 8.90e-42 155
MS.gene017043.t1 MTR_6g038240 25.413 484 301 14 6 472 12 452 2.23e-41 154
MS.gene017043.t1 MTR_0891s0010 33.110 299 155 7 194 477 24 292 3.17e-41 149
MS.gene017043.t1 MTR_8g466240 28.543 494 279 22 3 471 6 450 5.41e-41 152
MS.gene017043.t1 MTR_4g082820 28.340 494 289 20 4 471 6 460 6.66e-41 152
MS.gene017043.t1 MTR_7g070780 27.383 493 309 16 6 472 12 481 9.02e-41 153
MS.gene017043.t1 MTR_1g032490 26.923 494 304 16 5 474 10 470 1.00e-40 152
MS.gene017043.t1 MTR_8g044140 30.287 383 220 9 113 472 88 446 1.06e-40 152
MS.gene017043.t1 MTR_7g117405 27.634 503 299 18 7 477 14 483 1.09e-40 152
MS.gene017043.t1 MTR_7g070810 27.328 494 310 15 2 472 6 473 1.11e-40 152
MS.gene017043.t1 MTR_3g049970 26.800 500 303 18 5 477 9 472 1.25e-40 152
MS.gene017043.t1 MTR_7g102560 26.733 505 307 17 7 477 11 486 1.27e-40 152
MS.gene017043.t1 MTR_7g055710 26.884 491 314 14 6 472 12 481 2.09e-40 152
MS.gene017043.t1 MTR_6g014250 24.016 508 308 13 2 471 7 474 2.16e-40 151
MS.gene017043.t1 MTR_5g039900 25.755 497 310 12 5 471 13 480 3.61e-40 151
MS.gene017043.t1 MTR_6g014040 24.658 511 304 15 2 471 7 477 1.50e-39 149
MS.gene017043.t1 MTR_4g082810 30.467 407 247 14 4 394 6 392 1.60e-39 147
MS.gene017043.t1 MTR_1g107375 25.813 492 297 15 5 474 8 453 2.44e-39 148
MS.gene017043.t1 MTR_4g485590 31.422 436 227 17 4 418 8 392 2.92e-39 147
MS.gene017043.t1 MTR_5g035560 26.547 501 279 17 6 476 12 453 2.98e-39 149
MS.gene017043.t1 MTR_1g107315 26.465 495 313 16 4 477 7 471 3.48e-39 148
MS.gene017043.t1 MTR_0288s0020 24.652 503 294 15 2 471 7 457 3.74e-39 148
MS.gene017043.t1 MTR_4g108250 27.579 504 298 18 6 472 12 485 4.18e-39 148
MS.gene017043.t1 MTR_4g031800 25.904 498 313 16 2 474 6 472 4.67e-39 148
MS.gene017043.t1 MTR_5g464810 26.200 500 301 13 4 471 11 474 5.48e-39 147
MS.gene017043.t1 MTR_5g064240 26.200 500 301 13 4 471 11 474 5.48e-39 147
MS.gene017043.t1 MTR_1g107285 25.761 493 306 15 5 474 8 463 5.56e-39 147
MS.gene017043.t1 MTR_8g059425 24.260 507 308 13 2 471 7 474 5.88e-39 147
MS.gene017043.t1 MTR_1g040310 28.081 495 301 16 5 472 15 481 5.91e-39 148
MS.gene017043.t1 MTR_7g070910 27.680 513 289 21 3 472 9 482 6.86e-39 147
MS.gene017043.t1 MTR_5g040030 25.050 499 320 11 2 471 11 484 1.07e-38 147
MS.gene017043.t1 MTR_6g013440 25.294 510 301 16 2 471 8 477 1.31e-38 147
MS.gene017043.t1 MTR_7g102520 26.587 504 309 17 7 476 14 490 1.78e-38 147
MS.gene017043.t1 MTR_0036s0220 26.946 501 292 15 6 471 13 474 1.83e-38 146
MS.gene017043.t1 MTR_3g479470 26.600 500 304 14 2 471 10 476 2.44e-38 146
MS.gene017043.t1 MTR_6g014300 24.850 499 301 14 2 471 9 462 3.51e-38 145
MS.gene017043.t1 MTR_3g479610 31.661 319 169 8 178 477 27 315 3.60e-38 142
MS.gene017043.t1 MTR_4g008630 36.245 229 131 6 249 474 246 462 6.00e-38 144
MS.gene017043.t1 MTR_6g038200 24.948 481 293 16 4 463 10 443 6.84e-38 144
MS.gene017043.t1 MTR_6g035295 26.285 506 300 17 5 472 12 482 7.52e-38 145
MS.gene017043.t1 MTR_5g072830 24.744 489 301 14 4 474 9 448 8.52e-38 144
MS.gene017043.t1 MTR_5g016480 26.062 518 290 20 2 476 5 472 1.31e-37 144
MS.gene017043.t1 MTR_1g029540 34.979 243 139 8 238 474 230 459 1.84e-37 143
MS.gene017043.t1 MTR_3g084530 24.848 495 315 17 7 474 8 472 2.05e-37 143
MS.gene017043.t1 MTR_1g107365 27.310 487 297 15 5 474 45 491 2.18e-37 143
MS.gene017043.t1 MTR_7g070930 26.263 495 313 13 6 472 15 485 2.82e-37 143
MS.gene017043.t1 MTR_6g038230 23.770 488 306 14 4 471 10 451 5.19e-37 142
MS.gene017043.t1 MTR_2g008210 24.603 504 308 12 2 471 8 473 8.75e-37 141
MS.gene017043.t1 MTR_8g083290 26.263 495 305 16 6 475 5 464 8.90e-37 141
MS.gene017043.t1 MTR_6g038220 25.159 473 297 16 6 463 12 442 1.21e-36 140
MS.gene017043.t1 MTR_5g072860 25.657 495 300 16 5 476 18 467 1.34e-36 140
MS.gene017043.t1 MTR_6g014050 24.950 505 307 13 3 471 9 477 1.66e-36 140
MS.gene017043.t1 MTR_6g014310 25.648 386 241 8 109 475 123 481 2.23e-36 140
MS.gene017043.t1 MTR_0009s0240 29.688 384 216 17 105 471 109 455 2.31e-36 140
MS.gene017043.t1 MTR_1g107380 25.755 497 305 14 6 475 14 473 2.43e-36 140
MS.gene017043.t1 MTR_6g014020 23.913 506 313 17 2 471 7 476 3.27e-36 140
MS.gene017043.t1 MTR_7g013200 21.142 473 326 12 7 473 7 438 3.68e-36 139
MS.gene017043.t1 MTR_7g070870 26.148 501 280 16 2 472 16 456 4.25e-36 139
MS.gene017043.t1 MTR_3g084540 24.494 494 319 19 7 474 8 473 1.00e-35 138
MS.gene017043.t1 MTR_7g013180 22.495 489 317 15 1 473 1 443 1.03e-35 138
MS.gene017043.t1 MTR_7g011470 25.000 376 230 11 109 471 122 458 1.57e-35 137
MS.gene017043.t1 MTR_5g072840 24.380 484 303 13 4 471 9 445 2.98e-35 137
MS.gene017043.t1 MTR_5g072820 25.051 487 302 13 4 474 9 448 3.20e-35 136
MS.gene017043.t1 MTR_4g064987 26.543 486 299 16 3 476 6 445 4.22e-35 136
MS.gene017043.t1 MTR_7g011470 25.263 380 228 12 109 471 122 462 6.50e-35 136
MS.gene017043.t1 MTR_6g014270 23.333 510 319 11 3 475 5 479 7.85e-35 136
MS.gene017043.t1 MTR_3g009490 36.842 190 109 4 286 471 3 185 8.42e-35 129
MS.gene017043.t1 MTR_6g038300 23.750 480 315 10 6 472 12 453 8.67e-35 135
MS.gene017043.t1 MTR_6g014150 25.394 508 303 13 2 471 4 473 9.14e-35 136
MS.gene017043.t1 MTR_5g075440 25.205 488 311 14 4 476 9 457 1.37e-34 135
MS.gene017043.t1 MTR_4g128690 26.225 408 251 13 78 476 88 454 1.57e-34 135
MS.gene017043.t1 MTR_6g014187 24.554 505 311 15 2 471 7 476 1.61e-34 135
MS.gene017043.t1 MTR_6g014200 26.425 386 230 10 109 471 119 473 2.82e-34 134
MS.gene017043.t1 MTR_6g013450 23.183 509 312 14 3 471 8 477 2.93e-34 134
MS.gene017043.t1 MTR_6g013990 26.753 385 228 13 109 471 122 474 4.60e-34 134
MS.gene017043.t1 MTR_7g039550 34.222 225 134 3 250 471 45 258 5.16e-34 129
MS.gene017043.t1 MTR_8g083280 31.250 272 152 7 209 475 221 462 5.23e-34 134
MS.gene017043.t1 MTR_3g031450 24.644 491 296 16 4 475 17 452 6.36e-34 133
MS.gene017043.t1 MTR_4g485640 28.418 373 238 8 111 471 308 663 7.78e-34 135
MS.gene017043.t1 MTR_3g031400 24.473 474 292 13 4 463 17 438 1.39e-33 132
MS.gene017043.t1 MTR_7g080935 23.459 503 299 15 3 476 9 454 1.46e-33 132
MS.gene017043.t1 MTR_2g059240 28.822 399 216 13 103 475 113 469 1.62e-33 132
MS.gene017043.t1 MTR_8g071070 28.534 382 224 15 111 474 118 468 1.74e-33 132
MS.gene017043.t1 MTR_6g014170 24.213 508 291 16 2 471 7 458 2.32e-33 132
MS.gene017043.t1 MTR_7g080940 24.704 506 290 16 3 478 9 453 2.49e-33 131
MS.gene017043.t1 MTR_5g058320 23.154 501 306 15 3 471 8 461 2.69e-33 131
MS.gene017043.t1 MTR_4g064987 26.176 489 303 16 3 476 6 451 3.64e-33 131
MS.gene017043.t1 MTR_7g071050 26.915 483 254 19 3 457 11 422 5.78e-33 130
MS.gene017043.t1 MTR_8g090095 35.714 224 120 8 260 474 271 479 7.83e-33 130
MS.gene017043.t1 MTR_8g032950 26.000 500 305 21 5 472 12 478 8.96e-33 130
MS.gene017043.t1 MTR_8g043470 26.260 377 208 8 109 471 54 374 1.03e-32 128
MS.gene017043.t1 MTR_6g013960 22.817 504 321 13 2 471 7 476 1.22e-32 130
MS.gene017043.t1 MTR_3g084520 25.831 391 245 13 100 467 97 465 1.37e-32 129
MS.gene017043.t1 MTR_7g080950 24.074 486 309 15 3 472 4 445 2.25e-32 129
MS.gene017043.t1 MTR_7g013220 21.281 484 335 10 1 473 1 449 3.18e-32 128
MS.gene017043.t1 MTR_5g031840 24.951 513 294 13 1 474 1 461 3.97e-32 128
MS.gene017043.t1 MTR_6g013900 25.882 425 251 15 85 477 90 482 4.00e-32 128
MS.gene017043.t1 MTR_6g013920 25.879 398 232 15 109 478 121 483 1.86e-31 126
MS.gene017043.t1 MTR_7g470610 30.743 296 162 7 122 407 7 269 2.19e-31 122
MS.gene017043.t1 MTR_7g070583 30.743 296 162 7 122 407 7 269 2.19e-31 122
MS.gene017043.t1 MTR_8g009840 36.364 220 126 5 257 470 310 521 7.35e-31 125
MS.gene017043.t1 MTR_5g031830 25.099 506 296 18 5 474 12 470 1.28e-30 124
MS.gene017043.t1 MTR_6g014190 27.336 289 168 6 195 471 25 283 2.58e-30 119
MS.gene017043.t1 MTR_6g011340 24.156 385 240 9 109 471 122 476 5.98e-30 122
MS.gene017043.t1 MTR_7g013240 20.930 473 322 14 9 473 10 438 6.76e-30 121
MS.gene017043.t1 MTR_8g088560 23.984 492 304 14 5 472 10 455 7.19e-30 122
MS.gene017043.t1 MTR_5g004940 27.451 306 161 7 171 474 131 377 8.16e-30 120
MS.gene017043.t1 MTR_2086s0010 34.694 196 102 4 284 477 3 174 8.74e-30 115
MS.gene017043.t1 MTR_1996s0010 34.694 196 102 4 284 477 3 174 8.74e-30 115
MS.gene017043.t1 MTR_5g031860 28.533 375 210 13 123 474 130 469 9.78e-30 121
MS.gene017043.t1 MTR_0078s0200 26.498 317 211 9 2 308 3 307 1.35e-28 115
MS.gene017043.t1 MTR_7g013260 21.811 486 307 18 7 473 8 439 2.40e-28 117
MS.gene017043.t1 MTR_5g027210 32.589 224 137 5 254 474 269 481 3.73e-28 117
MS.gene017043.t1 MTR_8g007585 31.481 216 121 4 258 471 198 388 4.14e-28 115
MS.gene017043.t1 MTR_0477s0010 25.691 362 204 8 122 471 5 313 9.75e-28 113
MS.gene017043.t1 MTR_4g128720 23.577 492 315 16 1 476 11 457 2.57e-27 114
MS.gene017043.t1 MTR_6g014240 25.895 363 219 11 122 471 118 443 4.87e-27 113
MS.gene017043.t1 MTR_5g098960 26.737 475 272 20 1 452 3 424 8.00e-27 113
MS.gene017043.t1 MTR_8g068330 37.755 196 100 7 259 451 265 441 1.31e-26 112
MS.gene017043.t1 MTR_7g070760 33.019 212 96 4 204 407 28 201 7.49e-26 105
MS.gene017043.t1 MTR_8g006230 28.390 236 155 6 86 315 29 256 2.82e-24 102
MS.gene017043.t1 MTR_8g068360 33.333 219 123 9 237 451 245 444 4.99e-24 105
MS.gene017043.t1 MTR_4g123553 35.714 196 100 7 259 451 266 438 1.23e-23 103
MS.gene017043.t1 MTR_8g007565 28.150 373 215 14 93 448 103 439 1.36e-23 103
MS.gene017043.t1 MTR_5g066410 27.123 424 243 16 42 448 41 415 1.60e-23 103
MS.gene017043.t1 MTR_8g068340 30.038 263 145 12 199 451 212 445 2.43e-23 102
MS.gene017043.t1 MTR_8g007650 28.150 373 215 14 93 448 103 439 2.63e-23 102
MS.gene017043.t1 MTR_7g070995 40.602 133 69 2 347 472 13 142 2.81e-23 96.3
MS.gene017043.t1 MTR_5g072850 31.841 201 96 6 203 394 154 322 3.55e-23 101
MS.gene017043.t1 MTR_6g014185 26.573 286 142 9 203 478 121 348 4.16e-23 100
MS.gene017043.t1 MTR_2g046620 29.779 272 154 9 194 451 191 439 6.65e-23 101
MS.gene017043.t1 MTR_2g014900 23.878 490 303 15 5 471 7 449 8.96e-23 101
MS.gene017043.t1 MTR_2g008226 33.503 197 105 6 259 452 275 448 2.17e-22 100
MS.gene017043.t1 MTR_7g067120 24.622 463 274 16 2 451 6 406 2.54e-22 99.4
MS.gene017043.t1 MTR_2g008225 35.204 196 101 6 259 451 271 443 5.24e-22 99.0
MS.gene017043.t1 MTR_2g008220 35.204 196 101 6 259 451 270 442 6.44e-22 98.6
MS.gene017043.t1 MTR_5g066390 32.877 146 84 2 328 471 78 211 1.25e-21 93.6
MS.gene017043.t1 MTR_8g056740 28.713 303 154 13 111 407 55 301 3.11e-21 95.9
MS.gene017043.t1 MTR_0536s0030 33.775 151 91 5 330 472 200 349 8.51e-21 94.0
MS.gene017043.t1 MTR_4g079270 26.493 268 165 7 195 458 199 438 3.23e-20 93.6
MS.gene017043.t1 MTR_4g077960 33.673 196 104 7 259 451 243 415 3.27e-20 93.2
MS.gene017043.t1 MTR_4g079250 29.798 198 118 3 262 458 261 438 3.99e-20 93.2
MS.gene017043.t1 MTR_6g036650 35.204 196 101 8 259 451 276 448 4.30e-20 93.2
MS.gene017043.t1 MTR_6g014000 32.468 154 84 5 326 476 21 157 5.28e-20 92.8
MS.gene017043.t1 MTR_1g090270 30.045 223 133 8 240 459 244 446 1.64e-19 91.3
MS.gene017043.t1 MTR_6g042310 32.143 196 107 6 259 451 269 441 1.66e-19 91.3
MS.gene017043.t1 MTR_3g435310 32.653 196 106 6 259 451 225 397 3.12e-19 90.1
MS.gene017043.t1 MTR_6g014160 28.251 223 101 8 195 407 200 373 1.04e-18 88.2
MS.gene017043.t1 MTR_7g067330 29.442 197 109 6 257 451 238 406 2.04e-18 87.8
MS.gene017043.t1 MTR_4g059370 29.075 227 139 7 235 459 167 373 3.00e-18 87.0
MS.gene017043.t1 MTR_1g107325 32.143 140 87 2 337 474 219 352 7.25e-18 85.5
MS.gene017043.t1 MTR_2g083480 28.509 228 138 7 233 458 234 438 5.72e-17 83.6
MS.gene017043.t1 MTR_6g014186 20.833 504 293 14 2 471 4 435 1.89e-16 81.6
MS.gene017043.t1 MTR_5g090680 77.083 48 11 0 1 48 1 48 5.96e-16 74.3
MS.gene017043.t1 MTR_3g009500 28.731 268 168 12 1 253 1 260 3.53e-15 75.9
MS.gene017043.t1 MTR_2g083430 27.149 221 137 5 240 458 240 438 5.23e-15 77.4
MS.gene017043.t1 MTR_5g090590 61.111 54 21 0 403 456 1 54 1.99e-14 68.2
MS.gene017043.t1 MTR_3g009520 27.734 256 159 12 6 244 7 253 6.75e-14 72.0
MS.gene017043.t1 MTR_6g052375 31.250 192 97 8 171 352 28 194 9.92e-14 72.4
MS.gene017043.t1 MTR_6g005660 26.295 251 165 9 3 244 4 243 1.35e-12 68.2
MS.gene017043.t1 MTR_2g009740 36.170 94 43 2 260 353 202 278 4.24e-12 67.4
MS.gene017043.t1 MTR_2g083390 33.333 132 79 3 329 458 290 414 4.93e-12 68.2
MS.gene017043.t1 MTR_2g083490 23.319 476 296 19 6 458 9 438 8.33e-12 67.4
MS.gene017043.t1 MTR_1g090280 29.213 178 108 7 284 459 135 296 1.99e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017043.t1 AT3G21760 44.106 492 250 11 3 478 2 484 4.30e-134 396
MS.gene017043.t1 AT3G21750 40.664 482 269 8 3 478 2 472 2.53e-126 376
MS.gene017043.t1 AT4G15280 41.079 482 272 7 3 478 2 477 4.03e-125 373
MS.gene017043.t1 AT4G15280 41.079 482 272 7 3 478 34 509 8.55e-125 373
MS.gene017043.t1 AT3G21790 41.344 491 263 12 3 478 2 482 3.06e-124 371
MS.gene017043.t1 AT1G07250 40.741 486 255 11 1 471 2 469 5.42e-121 362
MS.gene017043.t1 AT2G29740 41.358 486 252 15 2 472 5 472 2.05e-118 355
MS.gene017043.t1 AT3G21800 41.093 494 260 10 1 478 1 479 5.22e-118 355
MS.gene017043.t1 AT3G21780 40.947 486 262 11 3 478 2 472 8.51e-117 352
MS.gene017043.t1 AT1G07240 41.164 481 248 10 1 463 1 464 9.67e-116 349
MS.gene017043.t1 AT1G07260 40.041 492 255 16 3 476 4 473 8.89e-112 338
MS.gene017043.t1 AT2G29730 40.000 485 251 13 1 471 1 459 4.75e-109 331
MS.gene017043.t1 AT2G29750 40.041 492 261 16 2 478 5 477 9.69e-105 321
MS.gene017043.t1 AT4G15260 43.716 366 195 6 116 478 1 358 1.43e-104 316
MS.gene017043.t1 AT2G29710 38.193 487 265 12 1 475 1 463 3.13e-102 314
MS.gene017043.t1 AT3G16520 31.828 487 285 14 1 471 1 456 1.92e-70 231
MS.gene017043.t1 AT4G01070 33.820 479 281 17 2 467 5 460 1.11e-69 230
MS.gene017043.t1 AT3G16520 31.579 475 278 14 1 459 1 444 2.39e-67 223
MS.gene017043.t1 AT3G16520 31.579 475 278 14 1 459 1 444 2.57e-67 223
MS.gene017043.t1 AT5G26310 31.535 482 275 18 12 470 14 463 1.43e-63 214
MS.gene017043.t1 AT5G66690 30.962 478 273 18 12 466 14 457 2.07e-62 211
MS.gene017043.t1 AT1G01390 33.264 481 283 18 5 471 8 464 2.81e-61 207
MS.gene017043.t1 AT1G01390 33.264 481 283 18 5 471 25 481 4.25e-61 207
MS.gene017043.t1 AT1G01420 33.402 485 272 16 6 470 12 465 6.97e-61 207
MS.gene017043.t1 AT1G01420 33.402 485 272 16 6 470 9 462 1.17e-60 206
MS.gene017043.t1 AT3G50740 29.600 500 293 21 1 472 3 471 1.33e-58 201
MS.gene017043.t1 AT4G36770 31.828 465 277 15 8 457 7 446 3.00e-55 191
MS.gene017043.t1 AT2G18570 29.878 492 287 18 1 467 1 459 1.06e-54 190
MS.gene017043.t1 AT4G34131 30.019 513 275 16 2 472 7 477 4.71e-51 181
MS.gene017043.t1 AT2G36770 27.200 500 313 15 7 478 16 492 8.08e-51 180
MS.gene017043.t1 AT5G12890 29.249 506 290 22 2 472 7 479 5.37e-50 178
MS.gene017043.t1 AT2G36760 26.453 499 318 14 7 478 16 492 1.17e-49 177
MS.gene017043.t1 AT2G36780 26.747 501 310 13 7 476 16 490 2.08e-49 176
MS.gene017043.t1 AT2G15480 28.715 498 302 13 2 472 7 478 2.88e-49 176
MS.gene017043.t1 AT2G15480 28.346 508 301 13 2 472 7 488 3.31e-49 176
MS.gene017043.t1 AT2G15490 28.862 492 301 13 6 472 8 475 1.04e-48 174
MS.gene017043.t1 AT2G15490 28.862 492 304 13 6 472 8 478 1.74e-48 174
MS.gene017043.t1 AT1G22380 27.525 505 304 14 2 478 10 480 5.21e-48 172
MS.gene017043.t1 AT4G34138 28.827 503 290 18 3 472 9 476 2.23e-47 171
MS.gene017043.t1 AT2G36800 27.022 507 300 15 7 475 14 488 5.38e-47 170
MS.gene017043.t1 AT2G36750 28.119 505 297 16 7 476 12 485 7.30e-47 169
MS.gene017043.t1 AT2G18560 31.156 398 229 15 86 467 1 369 3.78e-46 165
MS.gene017043.t1 AT3G53160 28.880 509 291 17 7 477 10 485 2.09e-45 165
MS.gene017043.t1 AT4G34135 29.158 463 271 13 2 436 8 441 6.33e-45 164
MS.gene017043.t1 AT1G78270 26.523 509 302 18 2 475 10 481 2.23e-44 162
MS.gene017043.t1 AT1G22400 26.611 481 279 14 2 448 10 450 3.16e-44 162
MS.gene017043.t1 AT1G22340 26.465 495 297 12 2 466 10 467 6.79e-44 161
MS.gene017043.t1 AT3G46660 27.310 487 296 17 3 474 12 455 4.18e-43 158
MS.gene017043.t1 AT2G31790 27.071 495 296 14 2 474 5 456 5.80e-43 158
MS.gene017043.t1 AT2G36790 27.435 503 304 15 7 476 15 489 7.78e-43 158
MS.gene017043.t1 AT1G22360 25.296 506 314 15 2 478 7 477 3.36e-41 154
MS.gene017043.t1 AT1G73880 29.191 507 276 21 3 476 12 468 6.47e-41 153
MS.gene017043.t1 AT1G22370 28.241 432 260 13 2 407 10 417 1.24e-40 152
MS.gene017043.t1 AT5G14860 29.960 504 275 25 7 472 10 473 1.84e-40 152
MS.gene017043.t1 AT1G22360 25.786 477 292 12 2 451 7 448 3.71e-40 150
MS.gene017043.t1 AT3G46670 26.735 490 287 18 6 474 10 448 4.07e-40 150
MS.gene017043.t1 AT2G30150 26.722 479 295 13 6 471 14 449 1.18e-39 149
MS.gene017043.t1 AT3G11340 26.441 503 278 19 3 476 7 446 3.78e-39 147
MS.gene017043.t1 AT2G30150 26.471 476 294 13 9 471 1 433 5.03e-39 147
MS.gene017043.t1 AT3G46690 27.071 495 290 19 1 474 5 449 1.28e-38 146
MS.gene017043.t1 AT3G21560 26.096 502 292 18 6 472 13 470 1.69e-38 146
MS.gene017043.t1 AT2G16890 26.506 498 291 17 6 471 10 464 1.71e-38 146
MS.gene017043.t1 AT5G17050 27.119 413 250 10 78 478 87 460 2.33e-38 145
MS.gene017043.t1 AT4G15490 24.950 497 320 13 2 477 5 469 4.25e-38 145
MS.gene017043.t1 AT5G59580 26.667 480 301 15 3 472 7 445 6.21e-38 144
MS.gene017043.t1 AT5G59590 26.446 484 302 16 1 472 6 447 7.86e-38 144
MS.gene017043.t1 AT2G30140 23.967 484 311 11 6 476 14 453 2.45e-37 142
MS.gene017043.t1 AT4G15480 25.964 389 254 10 95 472 111 476 4.65e-37 142
MS.gene017043.t1 AT3G46650 25.314 478 300 13 3 475 8 433 4.97e-37 141
MS.gene017043.t1 AT2G23260 26.465 495 294 16 2 474 7 453 6.16e-37 141
MS.gene017043.t1 AT2G30140 24.431 483 309 12 6 476 14 452 8.55e-37 141
MS.gene017043.t1 AT2G23250 30.663 362 208 13 124 474 106 435 4.52e-36 139
MS.gene017043.t1 AT4G15500 26.733 404 239 13 94 476 97 464 5.76e-36 139
MS.gene017043.t1 AT4G01070 30.726 358 222 13 2 349 5 346 1.28e-35 135
MS.gene017043.t1 AT3G53150 24.809 524 318 17 2 478 19 513 1.46e-35 139
MS.gene017043.t1 AT2G31750 24.409 508 297 16 3 478 6 458 1.82e-35 138
MS.gene017043.t1 AT1G05680 24.477 478 302 14 4 463 5 441 2.18e-35 137
MS.gene017043.t1 AT3G55700 25.407 492 306 15 2 476 5 452 2.71e-35 137
MS.gene017043.t1 AT2G31750 24.603 504 295 16 3 475 6 455 3.48e-35 137
MS.gene017043.t1 AT5G05870 32.550 298 163 10 185 474 187 454 4.02e-35 136
MS.gene017043.t1 AT3G46680 24.138 493 305 16 2 474 6 449 5.31e-35 136
MS.gene017043.t1 AT1G51210 25.966 466 275 15 3 449 18 432 9.13e-35 135
MS.gene017043.t1 AT5G38010 25.720 486 303 15 2 471 7 450 1.32e-34 135
MS.gene017043.t1 AT2G43820 25.709 494 289 17 2 471 4 443 1.87e-34 134
MS.gene017043.t1 AT4G15270 32.510 243 150 6 3 233 2 242 4.74e-34 130
MS.gene017043.t1 AT1G24100 26.285 506 279 22 3 472 9 456 5.57e-34 133
MS.gene017043.t1 AT3G46700 24.390 492 302 16 1 474 5 444 6.68e-34 133
MS.gene017043.t1 AT5G17030 28.212 358 221 8 125 476 130 457 7.31e-34 133
MS.gene017043.t1 AT3G55710 25.458 491 311 13 2 476 5 456 7.89e-34 133
MS.gene017043.t1 AT1G05675 23.663 486 312 14 4 471 5 449 8.11e-34 132
MS.gene017043.t1 AT4G15270 34.597 211 128 5 3 205 2 210 1.92e-33 126
MS.gene017043.t1 AT2G36970 27.957 279 170 7 203 478 224 474 2.86e-33 132
MS.gene017043.t1 AT1G22370 34.137 249 126 8 171 407 25 247 3.54e-33 128
MS.gene017043.t1 AT4G15550 25.948 501 292 18 7 472 15 471 5.90e-33 130
MS.gene017043.t1 AT5G03490 27.310 487 294 18 2 471 16 459 6.79e-33 130
MS.gene017043.t1 AT5G05880 33.091 275 153 10 204 474 201 448 7.88e-33 130
MS.gene017043.t1 AT5G38040 25.316 474 291 18 16 474 21 446 7.98e-33 130
MS.gene017043.t1 AT1G10400 25.636 511 296 19 1 476 3 464 8.56e-33 130
MS.gene017043.t1 AT2G16890 26.450 431 250 14 6 407 10 402 4.16e-32 127
MS.gene017043.t1 AT1G30530 27.681 401 241 14 85 475 90 451 4.50e-31 125
MS.gene017043.t1 AT1G06000 32.323 297 171 9 185 471 154 430 7.30e-30 121
MS.gene017043.t1 AT2G43840 24.544 493 300 13 3 474 5 446 1.02e-29 121
MS.gene017043.t1 AT2G43840 24.544 493 300 13 3 474 5 446 1.54e-29 120
MS.gene017043.t1 AT5G17040 25.743 505 282 16 1 476 1 441 2.04e-29 120
MS.gene017043.t1 AT4G15270 34.518 197 119 5 3 191 2 196 6.79e-29 114
MS.gene017043.t1 AT2G28080 24.750 501 299 15 9 478 22 475 7.08e-29 119
MS.gene017043.t1 AT5G05890 27.632 380 237 12 102 474 104 452 7.93e-29 119
MS.gene017043.t1 AT3G02100 23.658 503 311 16 1 478 9 463 8.91e-29 119
MS.gene017043.t1 AT3G46720 25.361 485 300 19 2 474 6 440 1.49e-28 117
MS.gene017043.t1 AT1G05560 23.374 492 324 16 1 477 1 454 6.12e-28 116
MS.gene017043.t1 AT1G05560 23.457 486 319 16 7 477 57 504 8.13e-28 116
MS.gene017043.t1 AT5G05860 28.777 278 161 8 205 475 201 448 3.28e-27 114
MS.gene017043.t1 AT1G05530 24.335 489 298 17 1 463 1 443 4.82e-27 113
MS.gene017043.t1 AT5G17040 26.801 347 204 10 142 476 31 339 1.35e-26 110
MS.gene017043.t1 AT5G05900 25.156 481 306 17 6 474 9 447 7.36e-26 110
MS.gene017043.t1 AT5G49690 32.061 262 137 13 197 451 205 432 2.11e-25 108
MS.gene017043.t1 AT1G64910 23.750 480 306 16 10 478 11 441 6.85e-25 107
MS.gene017043.t1 AT2G26480 24.230 487 319 17 1 478 4 449 8.41e-25 107
MS.gene017043.t1 AT4G14090 27.446 368 205 14 124 472 129 453 2.29e-24 105
MS.gene017043.t1 AT5G54010 24.280 486 304 17 3 472 4 441 3.47e-24 105
MS.gene017043.t1 AT5G65550 32.231 242 128 10 209 444 220 431 3.89e-24 105
MS.gene017043.t1 AT5G37950 27.368 285 180 9 104 381 78 342 5.77e-24 103
MS.gene017043.t1 AT5G37950 27.208 283 177 7 104 381 78 336 8.00e-24 102
MS.gene017043.t1 AT3G22250 23.382 479 297 16 2 453 5 440 4.96e-23 102
MS.gene017043.t1 AT3G29630 27.622 286 181 7 195 478 183 444 1.11e-21 97.8
MS.gene017043.t1 AT4G27560 30.213 235 139 6 240 472 230 441 1.14e-21 97.8
MS.gene017043.t1 AT1G64920 22.379 496 313 17 2 478 3 445 1.95e-21 97.1
MS.gene017043.t1 AT5G53990 23.140 484 300 16 10 476 11 439 4.35e-21 95.9
MS.gene017043.t1 AT3G29630 30.275 218 132 4 262 478 220 418 4.76e-21 95.5
MS.gene017043.t1 AT5G54060 24.385 488 303 18 6 470 14 458 7.88e-21 95.5
MS.gene017043.t1 AT4G27570 30.357 224 131 6 240 461 230 430 1.48e-20 94.4
MS.gene017043.t1 AT1G50580 29.487 234 142 5 241 472 224 436 6.54e-20 92.4
MS.gene017043.t1 AT2G22590 32.057 209 120 7 245 450 257 446 3.96e-19 90.1
MS.gene017043.t1 AT4G34135 26.347 334 208 9 2 309 8 329 1.01e-18 87.8
MS.gene017043.t1 AT2G22930 27.468 233 146 6 241 472 225 435 6.04e-18 86.7
MS.gene017043.t1 AT4G09500 23.093 472 299 18 3 461 4 424 3.70e-16 80.9
MS.gene017043.t1 AT4G09500 27.979 193 118 4 270 461 227 399 2.65e-15 78.2

Find 151 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGAACTTGGTTCGATGTT+TGG 0.210178 5.1:-72078097 None:intergenic
ACCAACGGTTCCCTTGGTTT+TGG 0.224093 5.1:-72078620 None:intergenic
TGGAACTTGGTTCGATGTTT+GGG 0.231171 5.1:-72078096 None:intergenic
TGATTACTCTCTTACTGAAT+TGG 0.253277 5.1:+72078834 MS.gene017043:CDS
CGAAGGGATTGAAAATTCTT+TGG 0.257544 5.1:-72078251 None:intergenic
ATACTTGAGAGCATATATTT+TGG 0.259296 5.1:+72078988 MS.gene017043:CDS
TAGATCAGGGTGAGAGAAAA+AGG 0.279182 5.1:-72078548 None:intergenic
TTTGGGCTCAGGGTTTATAA+TGG 0.293607 5.1:-72078602 None:intergenic
TCGCTTGTCTTCTTCACTTC+CGG 0.304211 5.1:+72078271 MS.gene017043:CDS
ATGGCGACGCCCTTCGGTTT+GGG 0.305820 5.1:-72078799 None:intergenic
TTTCGATGAGGATCAGATTA+AGG 0.308450 5.1:+72078720 MS.gene017043:CDS
GGATCTTCTTACAGTCATTT+AGG 0.309123 5.1:+72079258 MS.gene017043:CDS
CATGGCGACGCCCTTCGGTT+TGG 0.329270 5.1:-72078800 None:intergenic
TTTGGCAATATCAATCATAT+TGG 0.329593 5.1:-72078233 None:intergenic
CTCTCTTACTGAATTGGGCT+TGG 0.330437 5.1:+72078840 MS.gene017043:CDS
TTCCTTGTTTAGCATGGAAC+TGG 0.335999 5.1:-72078428 None:intergenic
TTGGGCTCAGGGTTTATAAT+GGG 0.340745 5.1:-72078601 None:intergenic
GAGTAGGAAAACTTTGTTAG+AGG 0.347946 5.1:+72079233 MS.gene017043:CDS
GATTACTCTCTTACTGAATT+GGG 0.351013 5.1:+72078835 MS.gene017043:CDS
ACAAGATTGAGAGAGGAATA+AGG 0.357686 5.1:+72079154 MS.gene017043:CDS
TTCTCTCACCCTGATCTAGC+TGG 0.381686 5.1:+72078553 MS.gene017043:CDS
TCAGCAGTTACAAGATAGTT+AGG 0.383017 5.1:-72079132 None:intergenic
TTTCCTCTGCTTTGGGACTA+GGG 0.384153 5.1:+72078693 MS.gene017043:CDS
GGCTCCGCAGACTCAAATAT+TGG 0.395625 5.1:+72078918 MS.gene017043:CDS
GCGACCATGGCGACGCCCTT+CGG 0.395867 5.1:-72078805 None:intergenic
ATCGGTAAACCAGCTAGATC+AGG 0.397776 5.1:-72078562 None:intergenic
AATCTACATTGTCTCTTTCA+CGG 0.405411 5.1:-72078333 None:intergenic
GAGACAGCTTGTTTGACGTT+TGG 0.410373 5.1:-72078148 None:intergenic
ACATCGGATTGTGTTGTGTA+TGG 0.412627 5.1:-72078007 None:intergenic
GCAGGGATTGGAAGGGTCAT+TGG 0.413137 5.1:+72078892 MS.gene017043:CDS
ACTTCCGGTGTTGCTTCCCT+TGG 0.413686 5.1:+72078286 MS.gene017043:CDS
GAAACAAATCCTCCCGTGGC+TGG 0.417526 5.1:-72078946 None:intergenic
GTTGCAGCAGCAGACTGAAT+TGG 0.418663 5.1:+72078363 MS.gene017043:CDS
TCATGACTAAGACAGTTATT+CGG 0.420940 5.1:-72077979 None:intergenic
ATCACGGTTGGTTAGAAGCT+TGG 0.423158 5.1:-72077948 None:intergenic
TACCCGAAGGGTTCTTAGAT+AGG 0.427402 5.1:+72078866 MS.gene017043:CDS
GATTTGTTTCCCATTGTGGC+TGG 0.436533 5.1:+72078959 MS.gene017043:CDS
ATCTGAACCAACGGTTCCCT+TGG 0.438415 5.1:-72078626 None:intergenic
CGTTTGGTTTCTGTGCTTCG+AGG 0.438592 5.1:-72078132 None:intergenic
TTCGAGGAAAGCCATCATTC+TGG 0.444159 5.1:-72078116 None:intergenic
AGATGGCTCGGACCGGGAAA+AGG 0.448137 5.1:-72077905 None:intergenic
TGTCCTATCTAAGAACCCTT+CGG 0.454375 5.1:-72078869 None:intergenic
GTCCTATCTAAGAACCCTTC+GGG 0.456381 5.1:-72078868 None:intergenic
TGTTTAGCATGGAACTGGGC+AGG 0.458526 5.1:-72078423 None:intergenic
GGAATCTAGATGGCTCGGAC+CGG 0.463519 5.1:-72077912 None:intergenic
AAGAGCGGCCACGTGGCAAT+GGG 0.468807 5.1:-72079015 None:intergenic
TTCCCATTCCTTGTTTAGCA+TGG 0.475048 5.1:-72078434 None:intergenic
AAAGAGCGGCCACGTGGCAA+TGG 0.477140 5.1:-72079016 None:intergenic
CTCAGGGTTTATAATGGGTC+CGG 0.481886 5.1:-72078596 None:intergenic
TTAGATAGGACAGCAGGGAT+TGG 0.483362 5.1:+72078880 MS.gene017043:CDS
AAAGCCATCATTCTGGAACT+TGG 0.484584 5.1:-72078109 None:intergenic
TACGAAGAGACCATATGAAA+TGG 0.485625 5.1:-72078774 None:intergenic
GGAGATTGCACGTGCTATTG+AGG 0.488024 5.1:+72078741 MS.gene017043:CDS
TTCCATGCTAAACAAGGAAT+GGG 0.488054 5.1:+72078432 MS.gene017043:CDS
ACTCAAGGGTGGAATCTAGA+TGG 0.488352 5.1:-72077922 None:intergenic
GTTGATGATGTTGAGAGAAT+CGG 0.491991 5.1:-72078053 None:intergenic
AATAAGGAATGTGTTGGAAA+AGG 0.493111 5.1:+72079170 MS.gene017043:CDS
GAGAGAATCGGAGGTGGGAA+GGG 0.494611 5.1:-72078041 None:intergenic
AAATCCTCCCGTGGCTGGGT+GGG 0.497209 5.1:-72078941 None:intergenic
GGTCCGGCAGGATAAATAAT+CGG 0.497425 5.1:-72078580 None:intergenic
GGAGGATTTGTTTCCCATTG+TGG 0.498356 5.1:+72078955 MS.gene017043:CDS
ATAGTGGTGTCCATTTCATA+TGG 0.500113 5.1:+72078764 MS.gene017043:CDS
GGGTTCTTAGATAGGACAGC+AGG 0.501106 5.1:+72078874 MS.gene017043:CDS
TATTGAATTCCAGCCACAAT+GGG 0.504269 5.1:-72078968 None:intergenic
TGAGAGAATCGGAGGTGGGA+AGG 0.507263 5.1:-72078042 None:intergenic
AAACAAATCCTCCCGTGGCT+GGG 0.507384 5.1:-72078945 None:intergenic
TCGGAGGCGGTTATCACGGT+TGG 0.509291 5.1:-72077960 None:intergenic
GGTGGCCTCAAGAAAGCAAA+TGG 0.510456 5.1:+72078478 MS.gene017043:CDS
CGAACCAAGTTCCAGAATGA+TGG 0.511255 5.1:+72078105 MS.gene017043:CDS
CAAATCCTCCCGTGGCTGGG+TGG 0.515319 5.1:-72078942 None:intergenic
AGTAGGAAAACTTTGTTAGA+GGG 0.520802 5.1:+72079234 MS.gene017043:CDS
GATGGCTCGGACCGGGAAAA+GGG 0.522044 5.1:-72077904 None:intergenic
GAATCTAGATGGCTCGGACC+GGG 0.524207 5.1:-72077911 None:intergenic
ATAGGACAGCAGGGATTGGA+AGG 0.524911 5.1:+72078884 MS.gene017043:CDS
AGGAATGTGTTGGAAAAGGA+TGG 0.524997 5.1:+72079174 MS.gene017043:CDS
TTATTCGGAGGCGGTTATCA+CGG 0.528433 5.1:-72077964 None:intergenic
GGAACTTGGTTCGATGTTTG+GGG 0.529090 5.1:-72078095 None:intergenic
TTAGAAGCTTGGCAAACTCA+AGG 0.530967 5.1:-72077937 None:intergenic
TTCCTCTGCTTTGGGACTAG+GGG 0.532477 5.1:+72078694 MS.gene017043:CDS
GGATTGGAAGGGTCATTGGA+TGG 0.533790 5.1:+72078896 MS.gene017043:CDS
GTTCCATGCTAAACAAGGAA+TGG 0.538019 5.1:+72078431 MS.gene017043:CDS
AAGAGATGAGTGAAAAGAGT+AGG 0.538493 5.1:+72079217 MS.gene017043:CDS
TTACCGATTATTTATCCTGC+CGG 0.540162 5.1:+72078577 MS.gene017043:CDS
CGAGTTGGCGAAAGTTGGTA+TGG 0.541673 5.1:-72078386 None:intergenic
CCCAAAACCAAGGGAACCGT+TGG 0.544135 5.1:+72078619 MS.gene017043:CDS
GCACGTGCTATTGAGGATAG+TGG 0.544608 5.1:+72078748 MS.gene017043:CDS
CATCGGATTGTGTTGTGTAT+GGG 0.549582 5.1:-72078006 None:intergenic
GAACTGGGCAGGGAGTATAT+AGG 0.550771 5.1:-72078412 None:intergenic
GATTGGAAGGGTCATTGGAT+GGG 0.552682 5.1:+72078897 MS.gene017043:CDS
GAGAGGAATAAGGAATGTGT+TGG 0.553376 5.1:+72079164 MS.gene017043:CDS
TAATGCCATTTGCTTTCTTG+AGG 0.554233 5.1:-72078483 None:intergenic
TGAACCAAGGGAAGCAACAC+CGG 0.556380 5.1:-72078290 None:intergenic
CATACCAACTTTCGCCAACT+CGG 0.556718 5.1:+72078387 MS.gene017043:CDS
GTTTAGCATGGAACTGGGCA+GGG 0.557705 5.1:-72078422 None:intergenic
TCCTTGTTTAGCATGGAACT+GGG 0.565196 5.1:-72078427 None:intergenic
AATATTGGCCCACCCAGCCA+CGG 0.566881 5.1:+72078933 MS.gene017043:CDS
ATGTTGAGAGAATCGGAGGT+GGG 0.570349 5.1:-72078046 None:intergenic
AGGAAAACTTTGTTAGAGGG+TGG 0.571832 5.1:+72079237 MS.gene017043:CDS
GGAACCGAGTTGGCGAAAGT+TGG 0.574609 5.1:-72078391 None:intergenic
GTCAACAACAAAGGCAGCGA+GGG 0.576148 5.1:-72078200 None:intergenic
GGAGTATATAGGAACCGAGT+TGG 0.578646 5.1:-72078401 None:intergenic
ATATTGGCCCACCCAGCCAC+GGG 0.579171 5.1:+72078934 MS.gene017043:CDS
GGGTTTATAATGGGTCCGGC+AGG 0.580616 5.1:-72078592 None:intergenic
GATTGTGTTAGATTATAGAG+TGG 0.583178 5.1:+72079095 MS.gene017043:CDS
AATATGAAGATTTGAACCAA+GGG 0.583266 5.1:-72078302 None:intergenic
AACCCTGAGCCCAAAACCAA+GGG 0.584453 5.1:+72078610 MS.gene017043:CDS
AGGGTGGAATCTAGATGGCT+CGG 0.585486 5.1:-72077917 None:intergenic
CTAAGACAGTTATTCGGAGG+CGG 0.585625 5.1:-72077973 None:intergenic
ATTGGTGTGTGAGCTGAAGA+TGG 0.591081 5.1:+72079065 MS.gene017043:CDS
GTAATCAGAGGGTGCGACCA+TGG 0.592141 5.1:-72078818 None:intergenic
GCCCAGTTCCATGCTAAACA+AGG 0.593517 5.1:+72078426 MS.gene017043:CDS
TCTTCGTAAACCCAAACCGA+AGG 0.597629 5.1:+72078789 MS.gene017043:CDS
GATGTTGAGAGAATCGGAGG+TGG 0.598482 5.1:-72078047 None:intergenic
GTGTGAGCTGAAGATGGCTG+TGG 0.601171 5.1:+72079071 MS.gene017043:CDS
TAGAAGCTTGGCAAACTCAA+GGG 0.605271 5.1:-72077936 None:intergenic
AGGAAAACTACAGAGGAAAG+AGG 0.609069 5.1:-72078676 None:intergenic
TCGGTAAACCAGCTAGATCA+GGG 0.610098 5.1:-72078561 None:intergenic
CAAACCGAAGGGCGTCGCCA+TGG 0.610226 5.1:+72078801 MS.gene017043:CDS
GATGATATCATCTGAACCAA+CGG 0.613511 5.1:-72078635 None:intergenic
GAAGTGAAGAAGACAAGCGA+AGG 0.614027 5.1:-72078268 None:intergenic
CTCACTACTAGAGAACAACA+TGG 0.614257 5.1:+72078175 MS.gene017043:CDS
TACCCCTAGTCCCAAAGCAG+AGG 0.616832 5.1:-72078696 None:intergenic
GATTATAGAGTGGAGTACAA+TGG 0.618298 5.1:+72079105 MS.gene017043:CDS
TTCAGTAAGAGAGTAATCAG+AGG 0.620922 5.1:-72078830 None:intergenic
AAACCCTGAGCCCAAAACCA+AGG 0.621240 5.1:+72078609 MS.gene017043:CDS
TGGGCCAATATTTGAGTCTG+CGG 0.621392 5.1:-72078922 None:intergenic
GAATATGAAGATTTGAACCA+AGG 0.623644 5.1:-72078303 None:intergenic
GTCTGTTGTTCAGCAAAGAG+CGG 0.624299 5.1:-72079030 None:intergenic
GGGGAAGAGAAACTTCTGGA+AGG 0.625930 5.1:-72078075 None:intergenic
AAGGGATTTAGTGTTAACAT+CGG 0.626373 5.1:-72078023 None:intergenic
GAACTTGGTTCGATGTTTGG+GGG 0.629732 5.1:-72078094 None:intergenic
TCAGTAAGAGAGTAATCAGA+GGG 0.633852 5.1:-72078829 None:intergenic
TTGGCCCACCCAGCCACGGG+AGG 0.636752 5.1:+72078937 MS.gene017043:CDS
GTTCAGATGATATCATCAAG+TGG 0.640058 5.1:+72078641 MS.gene017043:CDS
CTTCGTAAACCCAAACCGAA+GGG 0.641032 5.1:+72078790 MS.gene017043:CDS
ACTGCTGACAAGATTGAGAG+AGG 0.645137 5.1:+72079147 MS.gene017043:CDS
GTATTGAATTCCAGCCACAA+TGG 0.647499 5.1:-72078969 None:intergenic
TGACTAAGACAGTTATTCGG+AGG 0.648191 5.1:-72077976 None:intergenic
AAGCTTGGCAAACTCAAGGG+TGG 0.650061 5.1:-72077933 None:intergenic
AAGTGAAGAAGACAAGCGAA+GGG 0.654020 5.1:-72078267 None:intergenic
GACTAGGGGTACTTTCGATG+AGG 0.655196 5.1:+72078708 MS.gene017043:CDS
TAGGACAGCAGGGATTGGAA+GGG 0.657102 5.1:+72078885 MS.gene017043:CDS
GGTTCTTAGATAGGACAGCA+GGG 0.660300 5.1:+72078875 MS.gene017043:CDS
GCAGAACATGTCAACAACAA+AGG 0.660721 5.1:-72078209 None:intergenic
ATGGGAAACAAATCCTCCCG+TGG 0.667802 5.1:-72078950 None:intergenic
TTCAGCAAAGAGCGGCCACG+TGG 0.670684 5.1:-72079022 None:intergenic
TGTCAACAACAAAGGCAGCG+AGG 0.687793 5.1:-72078201 None:intergenic
GATGATGTTGAGAGAATCGG+AGG 0.710284 5.1:-72078050 None:intergenic
AAAGCAGAGGAAAACTACAG+AGG 0.716171 5.1:-72078683 None:intergenic
TTGGTGTGCCCATTGCCACG+TGG 0.732476 5.1:+72079007 MS.gene017043:CDS
TGAAGAGCTAGAATCCCATG+CGG 0.773972 5.1:+72078519 MS.gene017043:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AATATGAAGATTTGAACCAA+GGG - chr5.1:72078305-72078324 None:intergenic 25.0%
! TTTGGCAATATCAATCATAT+TGG - chr5.1:72078236-72078255 None:intergenic 25.0%
!!! ATACTTGAGAGCATATATTT+TGG + chr5.1:72078988-72079007 MS.gene017043:CDS 25.0%
AAGGGATTTAGTGTTAACAT+CGG - chr5.1:72078026-72078045 None:intergenic 30.0%
AATAAGGAATGTGTTGGAAA+AGG + chr5.1:72079170-72079189 MS.gene017043:CDS 30.0%
AATCTACATTGTCTCTTTCA+CGG - chr5.1:72078336-72078355 None:intergenic 30.0%
ACCAGCATAGTTCATAAAAA+AGG - chr5.1:72078461-72078480 None:intergenic 30.0%
AGTAGGAAAACTTTGTTAGA+GGG + chr5.1:72079234-72079253 MS.gene017043:CDS 30.0%
GAATATGAAGATTTGAACCA+AGG - chr5.1:72078306-72078325 None:intergenic 30.0%
GATTACTCTCTTACTGAATT+GGG + chr5.1:72078835-72078854 MS.gene017043:CDS 30.0%
GATTGTGTTAGATTATAGAG+TGG + chr5.1:72079095-72079114 MS.gene017043:CDS 30.0%
TCATGACTAAGACAGTTATT+CGG - chr5.1:72077982-72078001 None:intergenic 30.0%
TGATTACTCTCTTACTGAAT+TGG + chr5.1:72078834-72078853 MS.gene017043:CDS 30.0%
! ACAGACTAATGCTTTTCAAT+TGG + chr5.1:72079047-72079066 MS.gene017043:CDS 30.0%
!!! TCCTTTTTTATGAACTATGC+TGG + chr5.1:72078457-72078476 MS.gene017043:CDS 30.0%
!!! TTTTTTATGAACTATGCTGG+TGG + chr5.1:72078460-72078479 MS.gene017043:CDS 30.0%
AAGAGATGAGTGAAAAGAGT+AGG + chr5.1:72079217-72079236 MS.gene017043:CDS 35.0%
ACAAGATTGAGAGAGGAATA+AGG + chr5.1:72079154-72079173 MS.gene017043:CDS 35.0%
ATAGTGGTGTCCATTTCATA+TGG + chr5.1:72078764-72078783 MS.gene017043:CDS 35.0%
CGAAGGGATTGAAAATTCTT+TGG - chr5.1:72078254-72078273 None:intergenic 35.0%
GAGTAGGAAAACTTTGTTAG+AGG + chr5.1:72079233-72079252 MS.gene017043:CDS 35.0%
GATGATATCATCTGAACCAA+CGG - chr5.1:72078638-72078657 None:intergenic 35.0%
GATTATAGAGTGGAGTACAA+TGG + chr5.1:72079105-72079124 MS.gene017043:CDS 35.0%
GGATCTTCTTACAGTCATTT+AGG + chr5.1:72079258-72079277 MS.gene017043:CDS 35.0%
GTTCAGATGATATCATCAAG+TGG + chr5.1:72078641-72078660 MS.gene017043:CDS 35.0%
TACGAAGAGACCATATGAAA+TGG - chr5.1:72078777-72078796 None:intergenic 35.0%
TATTGAATTCCAGCCACAAT+GGG - chr5.1:72078971-72078990 None:intergenic 35.0%
TCAGCAGTTACAAGATAGTT+AGG - chr5.1:72079135-72079154 None:intergenic 35.0%
TCAGTAAGAGAGTAATCAGA+GGG - chr5.1:72078832-72078851 None:intergenic 35.0%
TTCAGTAAGAGAGTAATCAG+AGG - chr5.1:72078833-72078852 None:intergenic 35.0%
TTCCATGCTAAACAAGGAAT+GGG + chr5.1:72078432-72078451 MS.gene017043:CDS 35.0%
TTTCGATGAGGATCAGATTA+AGG + chr5.1:72078720-72078739 MS.gene017043:CDS 35.0%
! TAATGCCATTTGCTTTCTTG+AGG - chr5.1:72078486-72078505 None:intergenic 35.0%
! TTACCGATTATTTATCCTGC+CGG + chr5.1:72078577-72078596 MS.gene017043:CDS 35.0%
!! GTTGATGATGTTGAGAGAAT+CGG - chr5.1:72078056-72078075 None:intergenic 35.0%
AAAGCAGAGGAAAACTACAG+AGG - chr5.1:72078686-72078705 None:intergenic 40.0%
AAGTGAAGAAGACAAGCGAA+GGG - chr5.1:72078270-72078289 None:intergenic 40.0%
ACATCGGATTGTGTTGTGTA+TGG - chr5.1:72078010-72078029 None:intergenic 40.0%
AGAAAAAGGATTGAACCGCA+TGG - chr5.1:72078537-72078556 None:intergenic 40.0%
AGGAAAACTACAGAGGAAAG+AGG - chr5.1:72078679-72078698 None:intergenic 40.0%
AGGAAAACTTTGTTAGAGGG+TGG + chr5.1:72079237-72079256 MS.gene017043:CDS 40.0%
AGGAATGTGTTGGAAAAGGA+TGG + chr5.1:72079174-72079193 MS.gene017043:CDS 40.0%
CATCGGATTGTGTTGTGTAT+GGG - chr5.1:72078009-72078028 None:intergenic 40.0%
CTCACTACTAGAGAACAACA+TGG + chr5.1:72078175-72078194 MS.gene017043:CDS 40.0%
GAAAAAGGATTGAACCGCAT+GGG - chr5.1:72078536-72078555 None:intergenic 40.0%
GAGAGGAATAAGGAATGTGT+TGG + chr5.1:72079164-72079183 MS.gene017043:CDS 40.0%
GCAGAACATGTCAACAACAA+AGG - chr5.1:72078212-72078231 None:intergenic 40.0%
GTATTGAATTCCAGCCACAA+TGG - chr5.1:72078972-72078991 None:intergenic 40.0%
GTTCCATGCTAAACAAGGAA+TGG + chr5.1:72078431-72078450 MS.gene017043:CDS 40.0%
TAGAAGCTTGGCAAACTCAA+GGG - chr5.1:72077939-72077958 None:intergenic 40.0%
TAGATCAGGGTGAGAGAAAA+AGG - chr5.1:72078551-72078570 None:intergenic 40.0%
TGACTAAGACAGTTATTCGG+AGG - chr5.1:72077979-72077998 None:intergenic 40.0%
TGTCCTATCTAAGAACCCTT+CGG - chr5.1:72078872-72078891 None:intergenic 40.0%
TTAGAAGCTTGGCAAACTCA+AGG - chr5.1:72077940-72077959 None:intergenic 40.0%
TTGGGCTCAGGGTTTATAAT+GGG - chr5.1:72078604-72078623 None:intergenic 40.0%
TTTGGGCTCAGGGTTTATAA+TGG - chr5.1:72078605-72078624 None:intergenic 40.0%
! CTGTAGTTTTCCTCTGCTTT+GGG + chr5.1:72078686-72078705 MS.gene017043:CDS 40.0%
! TCCTTGTTTAGCATGGAACT+GGG - chr5.1:72078430-72078449 None:intergenic 40.0%
! TCTGTAGTTTTCCTCTGCTT+TGG + chr5.1:72078685-72078704 MS.gene017043:CDS 40.0%
! TGGAACTTGGTTCGATGTTT+GGG - chr5.1:72078099-72078118 None:intergenic 40.0%
! TTCCCATTCCTTGTTTAGCA+TGG - chr5.1:72078437-72078456 None:intergenic 40.0%
! TTCCTTGTTTAGCATGGAAC+TGG - chr5.1:72078431-72078450 None:intergenic 40.0%
!! AAAGCCATCATTCTGGAACT+TGG - chr5.1:72078112-72078131 None:intergenic 40.0%
ACTCAAGGGTGGAATCTAGA+TGG - chr5.1:72077925-72077944 None:intergenic 45.0%
ACTGCTGACAAGATTGAGAG+AGG + chr5.1:72079147-72079166 MS.gene017043:CDS 45.0%
ATCGGTAAACCAGCTAGATC+AGG - chr5.1:72078565-72078584 None:intergenic 45.0%
ATGTTGAGAGAATCGGAGGT+GGG - chr5.1:72078049-72078068 None:intergenic 45.0%
ATTGGTGTGTGAGCTGAAGA+TGG + chr5.1:72079065-72079084 MS.gene017043:CDS 45.0%
CATACCAACTTTCGCCAACT+CGG + chr5.1:72078387-72078406 MS.gene017043:CDS 45.0%
CGAACCAAGTTCCAGAATGA+TGG + chr5.1:72078105-72078124 MS.gene017043:CDS 45.0%
CTAAGACAGTTATTCGGAGG+CGG - chr5.1:72077976-72077995 None:intergenic 45.0%
CTCTCTTACTGAATTGGGCT+TGG + chr5.1:72078840-72078859 MS.gene017043:CDS 45.0%
CTTCGTAAACCCAAACCGAA+GGG + chr5.1:72078790-72078809 MS.gene017043:CDS 45.0%
GAAGTGAAGAAGACAAGCGA+AGG - chr5.1:72078271-72078290 None:intergenic 45.0%
GATGATGTTGAGAGAATCGG+AGG - chr5.1:72078053-72078072 None:intergenic 45.0%
GATTGGAAGGGTCATTGGAT+GGG + chr5.1:72078897-72078916 MS.gene017043:CDS 45.0%
GGAGTATATAGGAACCGAGT+TGG - chr5.1:72078404-72078423 None:intergenic 45.0%
GGTCCGGCAGGATAAATAAT+CGG - chr5.1:72078583-72078602 None:intergenic 45.0%
GGTTCTTAGATAGGACAGCA+GGG + chr5.1:72078875-72078894 MS.gene017043:CDS 45.0%
GTCCTATCTAAGAACCCTTC+GGG - chr5.1:72078871-72078890 None:intergenic 45.0%
GTCTGTTGTTCAGCAAAGAG+CGG - chr5.1:72079033-72079052 None:intergenic 45.0%
TACCCGAAGGGTTCTTAGAT+AGG + chr5.1:72078866-72078885 MS.gene017043:CDS 45.0%
TCGCTTGTCTTCTTCACTTC+CGG + chr5.1:72078271-72078290 MS.gene017043:CDS 45.0%
TCGGTAAACCAGCTAGATCA+GGG - chr5.1:72078564-72078583 None:intergenic 45.0%
TCTTCGTAAACCCAAACCGA+AGG + chr5.1:72078789-72078808 MS.gene017043:CDS 45.0%
TGAAGAGCTAGAATCCCATG+CGG + chr5.1:72078519-72078538 MS.gene017043:CDS 45.0%
TGGGCCAATATTTGAGTCTG+CGG - chr5.1:72078925-72078944 None:intergenic 45.0%
TTAGATAGGACAGCAGGGAT+TGG + chr5.1:72078880-72078899 MS.gene017043:CDS 45.0%
TTATTCGGAGGCGGTTATCA+CGG - chr5.1:72077967-72077986 None:intergenic 45.0%
TTCGAGGAAAGCCATCATTC+TGG - chr5.1:72078119-72078138 None:intergenic 45.0%
TTTGGGGGAAGAGAAACTTC+TGG - chr5.1:72078082-72078101 None:intergenic 45.0%
! ATCACGGTTGGTTAGAAGCT+TGG - chr5.1:72077951-72077970 None:intergenic 45.0%
! CTGGAACTTGGTTCGATGTT+TGG - chr5.1:72078100-72078119 None:intergenic 45.0%
! GAACTTGGTTCGATGTTTGG+GGG - chr5.1:72078097-72078116 None:intergenic 45.0%
! GAGACAGCTTGTTTGACGTT+TGG - chr5.1:72078151-72078170 None:intergenic 45.0%
! GATTTGTTTCCCATTGTGGC+TGG + chr5.1:72078959-72078978 MS.gene017043:CDS 45.0%
! GGAACTTGGTTCGATGTTTG+GGG - chr5.1:72078098-72078117 None:intergenic 45.0%
! GGAGGATTTGTTTCCCATTG+TGG + chr5.1:72078955-72078974 MS.gene017043:CDS 45.0%
! GTTGTGTTTGTCCCTTTTCC+CGG + chr5.1:72077893-72077912 MS.gene017043:CDS 45.0%
!! CTCAGGGTTTATAATGGGTC+CGG - chr5.1:72078599-72078618 None:intergenic 45.0%
!! TTTCCTCTGCTTTGGGACTA+GGG + chr5.1:72078693-72078712 MS.gene017043:CDS 45.0%
!!! TTTTCCTCTGCTTTGGGACT+AGG + chr5.1:72078692-72078711 MS.gene017043:CDS 45.0%
AAACAAATCCTCCCGTGGCT+GGG - chr5.1:72078948-72078967 None:intergenic 50.0%
AAACCCTGAGCCCAAAACCA+AGG + chr5.1:72078609-72078628 MS.gene017043:CDS 50.0%
AACCCTGAGCCCAAAACCAA+GGG + chr5.1:72078610-72078629 MS.gene017043:CDS 50.0%
AAGCTTGGCAAACTCAAGGG+TGG - chr5.1:72077936-72077955 None:intergenic 50.0%
AGGGTGGAATCTAGATGGCT+CGG - chr5.1:72077920-72077939 None:intergenic 50.0%
ATAGGACAGCAGGGATTGGA+AGG + chr5.1:72078884-72078903 MS.gene017043:CDS 50.0%
ATCTGAACCAACGGTTCCCT+TGG - chr5.1:72078629-72078648 None:intergenic 50.0%
ATGGGAAACAAATCCTCCCG+TGG - chr5.1:72078953-72078972 None:intergenic 50.0%
GATGTTGAGAGAATCGGAGG+TGG - chr5.1:72078050-72078069 None:intergenic 50.0%
GCCCAGTTCCATGCTAAACA+AGG + chr5.1:72078426-72078445 MS.gene017043:CDS 50.0%
GGATTGGAAGGGTCATTGGA+TGG + chr5.1:72078896-72078915 MS.gene017043:CDS 50.0%
GGCTCCGCAGACTCAAATAT+TGG + chr5.1:72078918-72078937 MS.gene017043:CDS 50.0%
GGGGAAGAGAAACTTCTGGA+AGG - chr5.1:72078078-72078097 None:intergenic 50.0%
GGGTTCTTAGATAGGACAGC+AGG + chr5.1:72078874-72078893 MS.gene017043:CDS 50.0%
GGTGGCCTCAAGAAAGCAAA+TGG + chr5.1:72078478-72078497 MS.gene017043:CDS 50.0%
GTCAACAACAAAGGCAGCGA+GGG - chr5.1:72078203-72078222 None:intergenic 50.0%
GTTGCAGCAGCAGACTGAAT+TGG + chr5.1:72078363-72078382 MS.gene017043:CDS 50.0%
GTTTAGCATGGAACTGGGCA+GGG - chr5.1:72078425-72078444 None:intergenic 50.0%
TAGGACAGCAGGGATTGGAA+GGG + chr5.1:72078885-72078904 MS.gene017043:CDS 50.0%
TGAACCAAGGGAAGCAACAC+CGG - chr5.1:72078293-72078312 None:intergenic 50.0%
TGTCAACAACAAAGGCAGCG+AGG - chr5.1:72078204-72078223 None:intergenic 50.0%
TGTTTAGCATGGAACTGGGC+AGG - chr5.1:72078426-72078445 None:intergenic 50.0%
TTCTCTCACCCTGATCTAGC+TGG + chr5.1:72078553-72078572 MS.gene017043:CDS 50.0%
! ACCAACGGTTCCCTTGGTTT+TGG - chr5.1:72078623-72078642 None:intergenic 50.0%
! CGTTTGGTTTCTGTGCTTCG+AGG - chr5.1:72078135-72078154 None:intergenic 50.0%
! GAACTGGGCAGGGAGTATAT+AGG - chr5.1:72078415-72078434 None:intergenic 50.0%
! GCACGTGCTATTGAGGATAG+TGG + chr5.1:72078748-72078767 MS.gene017043:CDS 50.0%
! GGAGATTGCACGTGCTATTG+AGG + chr5.1:72078741-72078760 MS.gene017043:CDS 50.0%
!! CCAACGGTTCCCTTGGTTTT+GGG - chr5.1:72078622-72078641 None:intergenic 50.0%
!! CGAGTTGGCGAAAGTTGGTA+TGG - chr5.1:72078389-72078408 None:intergenic 50.0%
!! GACTAGGGGTACTTTCGATG+AGG + chr5.1:72078708-72078727 MS.gene017043:CDS 50.0%
!! TTCCTCTGCTTTGGGACTAG+GGG + chr5.1:72078694-72078713 MS.gene017043:CDS 50.0%
!!! TGGGCTTGGTTTTACCCGAA+GGG + chr5.1:72078854-72078873 MS.gene017043:CDS 50.0%
!!! TTCCCTTGGTTTTGGGCTCA+GGG - chr5.1:72078615-72078634 None:intergenic 50.0%
!!! TTGGGCTTGGTTTTACCCGA+AGG + chr5.1:72078853-72078872 MS.gene017043:CDS 50.0%
AATATTGGCCCACCCAGCCA+CGG + chr5.1:72078933-72078952 MS.gene017043:CDS 55.0%
CCCAAAACCAAGGGAACCGT+TGG + chr5.1:72078619-72078638 MS.gene017043:CDS 55.0%
GAAACAAATCCTCCCGTGGC+TGG - chr5.1:72078949-72078968 None:intergenic 55.0%
GAGAGAATCGGAGGTGGGAA+GGG - chr5.1:72078044-72078063 None:intergenic 55.0%
GCAGGGATTGGAAGGGTCAT+TGG + chr5.1:72078892-72078911 MS.gene017043:CDS 55.0%
GTGTGAGCTGAAGATGGCTG+TGG + chr5.1:72079071-72079090 MS.gene017043:CDS 55.0%
TACCCCTAGTCCCAAAGCAG+AGG - chr5.1:72078699-72078718 None:intergenic 55.0%
TGAGAGAATCGGAGGTGGGA+AGG - chr5.1:72078045-72078064 None:intergenic 55.0%
! GAATCTAGATGGCTCGGACC+GGG - chr5.1:72077914-72077933 None:intergenic 55.0%
! GGAACCGAGTTGGCGAAAGT+TGG - chr5.1:72078394-72078413 None:intergenic 55.0%
! GGAATCTAGATGGCTCGGAC+CGG - chr5.1:72077915-72077934 None:intergenic 55.0%
! GTAATCAGAGGGTGCGACCA+TGG - chr5.1:72078821-72078840 None:intergenic 55.0%
!! ACTTCCGGTGTTGCTTCCCT+TGG + chr5.1:72078286-72078305 MS.gene017043:CDS 55.0%
!! GGGTTTATAATGGGTCCGGC+AGG - chr5.1:72078595-72078614 None:intergenic 55.0%
!!! GTTCCCTTGGTTTTGGGCTC+AGG - chr5.1:72078616-72078635 None:intergenic 55.0%
AAAGAGCGGCCACGTGGCAA+TGG - chr5.1:72079019-72079038 None:intergenic 60.0%
AAATCCTCCCGTGGCTGGGT+GGG - chr5.1:72078944-72078963 None:intergenic 60.0%
AAGAGCGGCCACGTGGCAAT+GGG - chr5.1:72079018-72079037 None:intergenic 60.0%
ATATTGGCCCACCCAGCCAC+GGG + chr5.1:72078934-72078953 MS.gene017043:CDS 60.0%
ATGGCGACGCCCTTCGGTTT+GGG - chr5.1:72078802-72078821 None:intergenic 60.0%
TCGGAGGCGGTTATCACGGT+TGG - chr5.1:72077963-72077982 None:intergenic 60.0%
TTCAGCAAAGAGCGGCCACG+TGG - chr5.1:72079025-72079044 None:intergenic 60.0%
TTGGTGTGCCCATTGCCACG+TGG + chr5.1:72079007-72079026 MS.gene017043:CDS 60.0%
! AGATGGCTCGGACCGGGAAA+AGG - chr5.1:72077908-72077927 None:intergenic 60.0%
! GATGGCTCGGACCGGGAAAA+GGG - chr5.1:72077907-72077926 None:intergenic 60.0%
CAAATCCTCCCGTGGCTGGG+TGG - chr5.1:72078945-72078964 None:intergenic 65.0%
CATGGCGACGCCCTTCGGTT+TGG - chr5.1:72078803-72078822 None:intergenic 65.0%
!! CAAACCGAAGGGCGTCGCCA+TGG + chr5.1:72078801-72078820 MS.gene017043:CDS 65.0%
GCGACCATGGCGACGCCCTT+CGG - chr5.1:72078808-72078827 None:intergenic 70.0%
TTGGCCCACCCAGCCACGGG+AGG + chr5.1:72078937-72078956 MS.gene017043:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 72077878 72079314 72077878 ID=MS.gene017043
chr5.1 mRNA 72077878 72079314 72077878 ID=MS.gene017043.t1;Parent=MS.gene017043
chr5.1 exon 72077878 72079314 72077878 ID=MS.gene017043.t1.exon1;Parent=MS.gene017043.t1
chr5.1 CDS 72077878 72079314 72077878 ID=cds.MS.gene017043.t1;Parent=MS.gene017043.t1
Gene Sequence

>MS.gene017043

ATGAAGAAAGCAGAAGTTGTGTTTGTCCCTTTTCCCGGTCCGAGCCATCTAGATTCCACCCTTGAGTTTGCCAAGCTTCTAACCAACCGTGATAACCGCCTCCGAATAACTGTCTTAGTCATGAAACTCCCATACACAACACAATCCGATGTTAACACTAAATCCCTTCCCACCTCCGATTCTCTCAACATCATCAACCTTCCAGAAGTTTCTCTTCCCCCAAACATCGAACCAAGTTCCAGAATGATGGCTTTCCTCGAAGCACAGAAACCAAACGTCAAACAAGCTGTCTCTAATCTCACTACTAGAGAACAACATGGAACCCTCGCTGCCTTTGTTGTTGACATGTTCTGCACCAATATGATTGATATTGCCAAAGAATTTTCAATCCCTTCGCTTGTCTTCTTCACTTCCGGTGTTGCTTCCCTTGGTTCAAATCTTCATATTCACACTCTCCGTGAAAGAGACAATGTAGATTCGAATCAGTTGCAGCAGCAGACTGAATTGGCCATACCAACTTTCGCCAACTCGGTTCCTATATACTCCCTGCCCAGTTCCATGCTAAACAAGGAATGGGAATCCTTTTTTATGAACTATGCTGGTGGCCTCAAGAAAGCAAATGGCATTATAGTAAATTCATTTGAAGAGCTAGAATCCCATGCGGTTCAATCCTTTTTCTCTCACCCTGATCTAGCTGGTTTACCGATTATTTATCCTGCCGGACCCATTATAAACCCTGAGCCCAAAACCAAGGGAACCGTTGGTTCAGATGATATCATCAAGTGGCTTGATGATCAACCTCTTTCCTCTGTAGTTTTCCTCTGCTTTGGGACTAGGGGTACTTTCGATGAGGATCAGATTAAGGAGATTGCACGTGCTATTGAGGATAGTGGTGTCCATTTCATATGGTCTCTTCGTAAACCCAAACCGAAGGGCGTCGCCATGGTCGCACCCTCTGATTACTCTCTTACTGAATTGGGCTTGGTTTTACCCGAAGGGTTCTTAGATAGGACAGCAGGGATTGGAAGGGTCATTGGATGGGCTCCGCAGACTCAAATATTGGCCCACCCAGCCACGGGAGGATTTGTTTCCCATTGTGGCTGGAATTCAATACTTGAGAGCATATATTTTGGTGTGCCCATTGCCACGTGGCCGCTCTTTGCTGAACAACAGACTAATGCTTTTCAATTGGTGTGTGAGCTGAAGATGGCTGTGGAGATTGTGTTAGATTATAGAGTGGAGTACAATGGTGAGCCTAACTATCTTGTAACTGCTGACAAGATTGAGAGAGGAATAAGGAATGTGTTGGAAAAGGATGGAGAAGTCAGAAAGAAAGTGAAAGAGATGAGTGAAAAGAGTAGGAAAACTTTGTTAGAGGGTGGATCTTCTTACAGTCATTTAGGTCGTTTAATAGATTTTATTGTGAATCAAATATGA
Protein sequence

>MS.gene017043.t1

MKKAEVVFVPFPGPSHLDSTLEFAKLLTNRDNRLRITVLVMKLPYTTQSDVNTKSLPTSDSLNIINLPEVSLPPNIEPSSRMMAFLEAQKPNVKQAVSNLTTREQHGTLAAFVVDMFCTNMIDIAKEFSIPSLVFFTSGVASLGSNLHIHTLRERDNVDSNQLQQQTELAIPTFANSVPIYSLPSSMLNKEWESFFMNYAGGLKKANGIIVNSFEELESHAVQSFFSHPDLAGLPIIYPAGPIINPEPKTKGTVGSDDIIKWLDDQPLSSVVFLCFGTRGTFDEDQIKEIARAIEDSGVHFIWSLRKPKPKGVAMVAPSDYSLTELGLVLPEGFLDRTAGIGRVIGWAPQTQILAHPATGGFVSHCGWNSILESIYFGVPIATWPLFAEQQTNAFQLVCELKMAVEIVLDYRVEYNGEPNYLVTADKIERGIRNVLEKDGEVRKKVKEMSEKSRKTLLEGGSSYSHLGRLIDFIVNQI