AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038258

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038258.t1 MTR_5g090610 91.405 477 29 1 1 477 1 465 0.0 890
MS.gene038258.t1 MTR_5g090700 78.838 482 98 2 1 478 1 482 0.0 783
MS.gene038258.t1 MTR_5g090630 80.042 476 88 1 1 476 1 469 0.0 778
MS.gene038258.t1 MTR_5g090660 77.987 477 105 0 1 477 1 477 0.0 775
MS.gene038258.t1 MTR_5g090580 79.123 479 96 4 1 476 1 478 0.0 763
MS.gene038258.t1 MTR_5g090620 77.244 479 106 3 1 476 1 479 0.0 756
MS.gene038258.t1 MTR_5g090670 76.875 480 107 3 1 476 1 480 0.0 754
MS.gene038258.t1 MTR_5g090600 75.783 479 95 4 1 478 1 459 0.0 733
MS.gene038258.t1 MTR_5g098930 69.792 480 132 6 1 476 1 471 0.0 674
MS.gene038258.t1 MTR_5g090650 70.571 350 72 2 1 350 1 319 2.65e-168 477
MS.gene038258.t1 MTR_5g090690 63.591 401 89 4 69 466 28 374 1.53e-162 465
MS.gene038258.t1 MTR_5g070040 41.322 484 248 13 2 473 8 467 4.72e-122 365
MS.gene038258.t1 MTR_2g040530 42.204 481 248 12 1 470 1 462 6.26e-120 359
MS.gene038258.t1 MTR_2g046820 42.531 482 243 13 1 470 1 460 8.90e-119 356
MS.gene038258.t1 MTR_2g046750 41.701 482 250 13 1 470 1 463 2.13e-118 355
MS.gene038258.t1 MTR_5g070090 40.289 484 246 12 2 472 8 461 5.81e-114 344
MS.gene038258.t1 MTR_3g009510 32.591 494 289 18 1 470 1 474 1.35e-79 256
MS.gene038258.t1 MTR_6g023665 34.238 479 282 13 2 468 10 467 5.70e-76 246
MS.gene038258.t1 MTR_6g488280 33.473 478 285 14 3 468 4 460 4.74e-74 241
MS.gene038258.t1 MTR_0428s0010 33.473 478 285 14 3 468 4 460 4.74e-74 241
MS.gene038258.t1 MTR_7g117170 34.382 477 278 15 6 468 16 471 3.09e-71 234
MS.gene038258.t1 MTR_8g006220 32.454 493 288 17 2 469 3 475 3.00e-69 229
MS.gene038258.t1 MTR_0184s0040 32.780 482 286 16 2 468 18 476 3.07e-69 229
MS.gene038258.t1 MTR_0078s0190 32.780 482 286 16 2 468 18 476 3.07e-69 229
MS.gene038258.t1 MTR_8g465670 32.025 484 293 15 2 469 4 467 4.50e-69 228
MS.gene038258.t1 MTR_8g006730 30.435 483 309 12 2 474 3 468 1.14e-66 221
MS.gene038258.t1 MTR_8g074550 30.632 506 300 17 2 475 5 491 1.33e-66 223
MS.gene038258.t1 MTR_8g006710 30.722 485 304 15 2 474 3 467 7.69e-65 217
MS.gene038258.t1 MTR_8g009055 30.515 485 294 13 2 468 3 462 1.44e-64 216
MS.gene038258.t1 MTR_6g033675 29.675 492 291 15 3 470 2 462 1.60e-64 216
MS.gene038258.t1 MTR_0078s0010 31.161 491 295 17 2 474 3 468 1.88e-64 216
MS.gene038258.t1 MTR_8g006270 32.716 486 281 16 2 469 3 460 4.61e-64 215
MS.gene038258.t1 MTR_8g027885 32.704 477 282 18 6 469 19 469 5.38e-64 215
MS.gene038258.t1 MTR_0078s0060 33.197 488 276 21 2 468 3 461 3.02e-63 213
MS.gene038258.t1 MTR_5g019580 30.972 494 291 17 2 468 4 474 5.40e-63 213
MS.gene038258.t1 MTR_8g027870 32.842 475 282 17 6 468 19 468 1.14e-62 211
MS.gene038258.t1 MTR_8g077590 31.056 483 287 17 4 468 8 462 6.01e-62 209
MS.gene038258.t1 MTR_8g009073 31.893 486 284 20 2 468 3 460 7.52e-62 209
MS.gene038258.t1 MTR_6g033615 32.075 477 285 14 3 470 2 448 2.80e-61 207
MS.gene038258.t1 MTR_7g047030 31.070 486 290 17 2 468 3 462 4.11e-61 207
MS.gene038258.t1 MTR_7g047270 31.070 486 290 17 2 468 3 462 4.11e-61 207
MS.gene038258.t1 MTR_6g033625 30.943 488 286 15 3 468 2 460 5.12e-61 207
MS.gene038258.t1 MTR_8g012635 30.661 499 292 18 2 474 3 473 6.50e-61 206
MS.gene038258.t1 MTR_0184s0030 31.723 476 287 16 2 461 3 456 1.58e-60 206
MS.gene038258.t1 MTR_8g006260 31.303 476 289 17 3 461 4 458 2.36e-60 205
MS.gene038258.t1 MTR_6g033660 29.545 484 295 12 6 470 5 461 3.80e-60 204
MS.gene038258.t1 MTR_8g009050 30.515 485 294 18 2 468 3 462 4.23e-60 204
MS.gene038258.t1 MTR_8g009067 31.557 488 285 18 2 469 3 461 9.83e-60 203
MS.gene038258.t1 MTR_8g008970 31.622 487 284 19 2 468 3 460 1.60e-59 209
MS.gene038258.t1 MTR_8g008970 33.101 287 162 7 196 478 534 794 1.36e-36 144
MS.gene038258.t1 MTR_8g009063 31.959 485 287 18 2 468 10 469 1.97e-59 203
MS.gene038258.t1 MTR_8g008990 30.722 485 295 17 2 468 3 464 9.58e-59 201
MS.gene038258.t1 MTR_6g033725 30.061 489 290 14 3 470 2 459 1.56e-58 200
MS.gene038258.t1 MTR_1g019510 28.893 488 315 14 2 478 3 469 2.73e-57 197
MS.gene038258.t1 MTR_7g102460 28.850 513 299 17 3 478 7 490 5.48e-57 197
MS.gene038258.t1 MTR_8g012650 30.204 490 280 17 2 461 3 460 7.54e-57 196
MS.gene038258.t1 MTR_8g012745 28.921 491 290 15 2 465 3 461 1.21e-56 195
MS.gene038258.t1 MTR_5g019580 29.857 489 275 17 2 468 56 498 6.73e-55 191
MS.gene038258.t1 MTR_7g046490 29.959 484 297 19 2 469 3 460 4.83e-54 188
MS.gene038258.t1 MTR_6g005600 29.193 483 302 17 3 468 4 463 2.26e-52 184
MS.gene038258.t1 MTR_7g102490 28.988 514 299 18 3 478 7 492 1.02e-51 183
MS.gene038258.t1 MTR_8g009067 32.213 357 216 10 122 469 4 343 1.88e-50 176
MS.gene038258.t1 MTR_4g024020 27.364 497 300 14 3 463 7 478 4.84e-50 178
MS.gene038258.t1 MTR_3g479520 29.159 511 288 18 2 475 12 485 7.94e-49 174
MS.gene038258.t1 MTR_8g066610 28.911 505 280 17 6 470 10 475 8.52e-49 174
MS.gene038258.t1 MTR_8g009073 36.972 284 154 10 195 469 65 332 1.39e-48 170
MS.gene038258.t1 MTR_8g012730 35.740 277 134 8 194 460 54 296 2.70e-48 169
MS.gene038258.t1 MTR_4g095008 29.560 477 278 17 15 469 21 461 1.03e-47 173
MS.gene038258.t1 MTR_1g107350 29.303 488 284 20 5 465 8 461 1.86e-47 171
MS.gene038258.t1 MTR_7g102450 27.856 499 299 17 7 478 13 477 4.78e-47 169
MS.gene038258.t1 MTR_4g485630 27.856 499 297 18 2 470 6 471 6.61e-47 169
MS.gene038258.t1 MTR_1g107360 26.434 488 310 11 5 475 9 464 1.50e-46 168
MS.gene038258.t1 MTR_0536s0020 26.347 501 299 18 2 470 15 477 7.69e-46 166
MS.gene038258.t1 MTR_3g069710 28.719 484 295 15 2 474 9 453 1.54e-45 165
MS.gene038258.t1 MTR_5g464760 27.545 501 303 15 3 473 10 480 2.08e-45 165
MS.gene038258.t1 MTR_4g031800 28.317 505 298 18 2 476 6 476 2.09e-45 165
MS.gene038258.t1 MTR_8g064870 25.203 492 315 14 5 472 11 473 2.29e-45 165
MS.gene038258.t1 MTR_8g064880 27.578 446 278 13 6 430 10 431 4.46e-45 164
MS.gene038258.t1 MTR_8g012630 40.670 209 110 5 259 461 204 404 5.68e-45 162
MS.gene038258.t1 MTR_4g094920 28.125 480 289 16 15 473 36 480 6.04e-45 164
MS.gene038258.t1 MTR_1g062380 28.817 524 273 22 6 474 17 495 9.51e-45 164
MS.gene038258.t1 MTR_5g045970 26.602 515 295 20 6 474 17 494 1.07e-44 164
MS.gene038258.t1 MTR_1g032490 27.000 500 294 17 5 472 10 470 3.67e-44 162
MS.gene038258.t1 MTR_6g038240 27.016 496 282 13 6 473 12 455 5.30e-44 161
MS.gene038258.t1 MTR_2g098430 29.114 474 274 21 2 446 3 443 6.14e-44 161
MS.gene038258.t1 MTR_2g035020 27.767 497 300 21 5 470 11 479 1.49e-43 160
MS.gene038258.t1 MTR_5g029800 28.659 492 302 20 5 472 11 477 1.58e-43 160
MS.gene038258.t1 MTR_5g072810 26.261 476 289 14 4 461 11 442 1.68e-43 159
MS.gene038258.t1 MTR_3g069690 28.514 498 286 18 2 477 5 454 1.74e-43 159
MS.gene038258.t1 MTR_4g117890 26.305 498 307 17 2 472 10 474 2.32e-43 160
MS.gene038258.t1 MTR_7g117405 27.071 495 310 16 7 475 14 483 2.71e-43 159
MS.gene038258.t1 MTR_1g019520 38.839 224 120 3 261 478 6 218 2.78e-43 152
MS.gene038258.t1 MTR_5g045960 26.782 519 303 21 2 477 6 490 3.39e-43 159
MS.gene038258.t1 MTR_5g035580 26.667 495 286 16 5 474 13 455 5.93e-43 158
MS.gene038258.t1 MTR_7g102550 28.189 486 296 17 7 461 11 474 1.21e-42 158
MS.gene038258.t1 MTR_3g049970 25.709 494 314 15 5 475 9 472 1.37e-42 157
MS.gene038258.t1 MTR_1g107285 27.941 408 240 13 88 477 97 468 2.43e-42 157
MS.gene038258.t1 MTR_7g102560 26.848 514 299 19 7 478 11 489 2.66e-42 157
MS.gene038258.t1 MTR_1g107315 27.273 506 295 17 5 477 8 473 3.14e-42 157
MS.gene038258.t1 MTR_3g079480 27.875 513 292 18 2 475 18 491 4.91e-42 156
MS.gene038258.t1 MTR_8g466240 28.427 496 275 20 3 469 6 450 5.97e-42 155
MS.gene038258.t1 MTR_4g094220 26.130 509 296 17 3 469 5 475 9.07e-42 155
MS.gene038258.t1 MTR_0036s0220 27.292 480 280 12 5 453 12 453 1.11e-41 155
MS.gene038258.t1 MTR_3g479490 27.490 502 308 16 2 475 3 476 1.61e-41 154
MS.gene038258.t1 MTR_4g117960 24.798 496 307 18 9 470 15 478 2.35e-41 154
MS.gene038258.t1 MTR_4g118000 26.775 493 296 19 9 475 16 469 3.10e-41 154
MS.gene038258.t1 MTR_4g485620 26.721 494 280 17 17 470 1 452 5.13e-41 153
MS.gene038258.t1 MTR_2g034990 26.613 496 307 20 5 470 11 479 6.27e-41 153
MS.gene038258.t1 MTR_2g035040 26.923 390 240 15 107 470 14 384 1.12e-40 150
MS.gene038258.t1 MTR_0891s0010 31.544 298 159 8 194 475 24 292 1.33e-40 147
MS.gene038258.t1 MTR_5g464810 26.575 508 295 13 4 473 11 478 1.44e-40 152
MS.gene038258.t1 MTR_5g064240 26.575 508 295 13 4 473 11 478 1.44e-40 152
MS.gene038258.t1 MTR_0288s0020 25.149 505 295 17 2 473 7 461 1.69e-40 151
MS.gene038258.t1 MTR_4g117980 27.551 490 302 18 9 470 15 479 1.99e-40 152
MS.gene038258.t1 MTR_6g014290 25.294 510 310 17 2 475 7 481 4.23e-40 150
MS.gene038258.t1 MTR_6g078320 26.721 494 318 20 4 474 10 482 6.01e-40 150
MS.gene038258.t1 MTR_7g012120 26.380 489 314 15 5 470 16 481 6.05e-40 150
MS.gene038258.t1 MTR_3g008010 25.000 508 307 16 3 473 8 478 6.98e-40 150
MS.gene038258.t1 MTR_5g072830 25.572 481 305 13 4 472 9 448 7.82e-40 149
MS.gene038258.t1 MTR_6g014220 25.195 512 303 17 2 473 7 478 9.51e-40 150
MS.gene038258.t1 MTR_5g035560 26.113 494 290 15 5 474 11 453 1.74e-39 149
MS.gene038258.t1 MTR_7g070660 29.787 376 229 15 111 470 121 477 2.10e-39 149
MS.gene038258.t1 MTR_4g064987 27.310 487 290 15 3 473 6 444 2.27e-39 148
MS.gene038258.t1 MTR_6g035185 26.273 491 308 19 9 470 15 480 2.71e-39 149
MS.gene038258.t1 MTR_1g107380 28.165 387 220 12 109 473 123 473 4.47e-39 148
MS.gene038258.t1 MTR_0009s0240 27.049 488 298 18 3 469 5 455 4.48e-39 147
MS.gene038258.t1 MTR_5g067170 26.994 489 304 19 9 470 15 477 5.67e-39 147
MS.gene038258.t1 MTR_1g107365 25.761 493 295 18 5 472 45 491 1.29e-38 147
MS.gene038258.t1 MTR_6g014250 25.434 519 293 18 2 473 7 478 1.71e-38 146
MS.gene038258.t1 MTR_3g479610 30.031 323 169 10 171 475 32 315 2.60e-38 142
MS.gene038258.t1 MTR_5g087620 26.602 515 310 17 2 474 7 495 3.48e-38 145
MS.gene038258.t1 MTR_7g102520 24.853 511 307 15 7 474 14 490 3.50e-38 146
MS.gene038258.t1 MTR_5g072840 26.013 469 296 12 4 461 9 437 4.06e-38 144
MS.gene038258.t1 MTR_4g008630 33.195 241 144 7 237 472 234 462 4.92e-38 144
MS.gene038258.t1 MTR_7g071040 25.553 497 318 16 3 470 15 488 5.23e-38 145
MS.gene038258.t1 MTR_0536s0010 25.151 497 319 16 2 478 18 481 5.94e-38 145
MS.gene038258.t1 MTR_6g035265 25.662 491 302 19 9 470 15 471 6.50e-38 144
MS.gene038258.t1 MTR_4g064987 27.254 488 297 16 3 474 6 451 7.14e-38 144
MS.gene038258.t1 MTR_6g038200 25.470 479 291 16 4 461 10 443 7.56e-38 144
MS.gene038258.t1 MTR_4g485640 27.926 376 234 10 111 469 308 663 1.05e-37 146
MS.gene038258.t1 MTR_3g479470 27.148 512 284 18 2 469 10 476 1.10e-37 144
MS.gene038258.t1 MTR_4g082820 25.761 493 317 18 5 478 7 469 1.77e-37 143
MS.gene038258.t1 MTR_5g016660 26.181 508 301 15 3 470 8 481 2.88e-37 143
MS.gene038258.t1 MTR_7g070610 29.396 381 229 16 111 470 123 484 2.89e-37 143
MS.gene038258.t1 MTR_5g072820 26.596 470 292 15 4 461 9 437 3.97e-37 142
MS.gene038258.t1 MTR_1g107375 26.847 406 227 14 94 472 91 453 9.26e-37 141
MS.gene038258.t1 MTR_6g014040 25.388 516 300 20 2 473 7 481 1.21e-36 141
MS.gene038258.t1 MTR_6g014020 26.419 511 300 20 2 473 7 480 1.24e-36 141
MS.gene038258.t1 MTR_7g055710 25.703 498 311 16 5 470 11 481 1.93e-36 140
MS.gene038258.t1 MTR_7g070940 28.954 373 231 11 111 470 119 470 2.06e-36 140
MS.gene038258.t1 MTR_6g013440 26.181 508 305 19 2 473 8 481 2.10e-36 140
MS.gene038258.t1 MTR_6g038220 26.392 485 274 18 6 461 12 442 2.57e-36 140
MS.gene038258.t1 MTR_8g059425 25.294 510 305 17 2 473 7 478 3.51e-36 140
MS.gene038258.t1 MTR_7g070740 26.839 503 303 20 3 470 9 481 3.93e-36 140
MS.gene038258.t1 MTR_4g117950 26.263 495 302 20 2 470 3 460 1.81e-35 137
MS.gene038258.t1 MTR_7g070810 28.533 375 233 12 111 470 119 473 1.84e-35 138
MS.gene038258.t1 MTR_7g070800 26.061 495 310 17 5 470 6 473 2.38e-35 137
MS.gene038258.t1 MTR_4g485590 32.063 315 160 12 113 416 121 392 3.03e-35 136
MS.gene038258.t1 MTR_7g070780 26.190 504 301 20 5 470 11 481 3.23e-35 137
MS.gene038258.t1 MTR_5g016480 32.168 286 155 8 205 478 214 472 3.65e-35 137
MS.gene038258.t1 MTR_6g038300 24.481 482 309 11 5 470 11 453 3.67e-35 136
MS.gene038258.t1 MTR_8g044140 29.921 381 225 14 112 470 86 446 3.91e-35 136
MS.gene038258.t1 MTR_6g038230 24.330 485 289 15 4 461 10 443 4.45e-35 136
MS.gene038258.t1 MTR_5g072860 24.540 489 311 12 5 474 18 467 6.93e-35 136
MS.gene038258.t1 MTR_7g070860 25.610 492 308 16 2 470 4 460 6.96e-35 136
MS.gene038258.t1 MTR_6g014270 23.938 518 304 16 3 473 5 479 7.19e-35 136
MS.gene038258.t1 MTR_2g008210 25.787 508 303 17 2 473 8 477 7.53e-35 136
MS.gene038258.t1 MTR_1g040310 29.255 376 231 11 112 470 124 481 1.00e-34 136
MS.gene038258.t1 MTR_6g013960 24.854 515 303 19 2 473 7 480 1.32e-34 135
MS.gene038258.t1 MTR_7g013200 21.822 472 326 13 7 473 7 440 1.44e-34 134
MS.gene038258.t1 MTR_7g080900 23.614 487 312 13 2 470 9 453 1.73e-34 134
MS.gene038258.t1 MTR_8g071070 28.382 377 229 14 111 472 118 468 1.78e-34 135
MS.gene038258.t1 MTR_1g029540 31.818 242 147 8 237 472 230 459 2.45e-34 134
MS.gene038258.t1 MTR_6g014310 27.041 392 226 15 109 473 123 481 2.99e-34 134
MS.gene038258.t1 MTR_5g004940 32.432 259 133 7 220 475 161 380 3.32e-34 133
MS.gene038258.t1 MTR_6g014300 26.800 500 296 20 2 473 9 466 3.44e-34 134
MS.gene038258.t1 MTR_5g075440 24.899 494 303 14 4 474 9 457 4.33e-34 134
MS.gene038258.t1 MTR_4g108250 26.285 506 302 18 5 470 11 485 5.15e-34 134
MS.gene038258.t1 MTR_7g070930 26.121 513 291 19 5 470 14 485 7.92e-34 133
MS.gene038258.t1 MTR_7g070870 30.000 310 178 8 168 470 179 456 1.20e-33 132
MS.gene038258.t1 MTR_4g082810 27.407 405 258 13 5 392 7 392 1.26e-33 131
MS.gene038258.t1 MTR_6g013990 25.581 387 236 13 109 473 122 478 1.52e-33 132
MS.gene038258.t1 MTR_7g011470 24.586 423 258 12 75 473 81 466 1.72e-33 132
MS.gene038258.t1 MTR_5g031840 25.397 504 301 18 1 472 1 461 2.01e-33 132
MS.gene038258.t1 MTR_7g013240 22.863 468 317 14 9 471 10 438 2.22e-33 131
MS.gene038258.t1 MTR_3g009490 36.126 191 110 5 285 470 3 186 2.52e-33 125
MS.gene038258.t1 MTR_5g040030 24.351 501 319 15 2 469 11 484 3.10e-33 132
MS.gene038258.t1 MTR_7g013180 22.177 487 319 17 1 471 1 443 4.74e-33 130
MS.gene038258.t1 MTR_7g013220 23.457 486 320 16 1 471 1 449 4.79e-33 130
MS.gene038258.t1 MTR_7g070910 25.100 498 319 15 3 470 9 482 5.47e-33 131
MS.gene038258.t1 MTR_6g014170 24.266 511 293 19 2 473 7 462 6.19e-33 130
MS.gene038258.t1 MTR_8g083290 25.600 500 302 13 6 474 5 465 6.94e-33 130
MS.gene038258.t1 MTR_6g035295 25.697 502 306 17 5 470 12 482 7.89e-33 130
MS.gene038258.t1 MTR_5g039900 28.084 381 225 12 113 469 125 480 8.90e-33 130
MS.gene038258.t1 MTR_6g013450 25.341 513 302 19 3 473 8 481 9.23e-33 130
MS.gene038258.t1 MTR_3g031450 25.052 479 287 16 4 463 17 442 1.06e-32 130
MS.gene038258.t1 MTR_2g059240 28.424 387 211 12 113 473 123 469 2.44e-32 129
MS.gene038258.t1 MTR_7g011470 23.877 423 257 11 75 473 81 462 2.76e-32 129
MS.gene038258.t1 MTR_6g014187 24.561 513 307 17 2 473 7 480 3.09e-32 129
MS.gene038258.t1 MTR_6g014050 24.952 517 298 19 3 473 9 481 5.80e-32 128
MS.gene038258.t1 MTR_4g128690 25.381 394 252 11 85 472 95 452 6.62e-32 127
MS.gene038258.t1 MTR_6g013920 26.735 389 231 14 109 473 121 479 8.72e-32 127
MS.gene038258.t1 MTR_6g014150 25.000 512 306 17 2 473 4 477 9.04e-32 127
MS.gene038258.t1 MTR_6g011340 25.193 389 237 12 109 473 122 480 1.09e-31 127
MS.gene038258.t1 MTR_8g083280 29.630 270 157 6 209 473 221 462 1.16e-31 127
MS.gene038258.t1 MTR_5g058320 24.254 503 304 17 3 473 8 465 1.55e-31 126
MS.gene038258.t1 MTR_7g080935 24.449 499 297 17 3 474 9 454 1.55e-31 126
MS.gene038258.t1 MTR_3g084540 24.900 498 310 18 7 472 8 473 1.72e-31 126
MS.gene038258.t1 MTR_3g031400 23.469 490 299 15 4 473 17 450 2.39e-31 126
MS.gene038258.t1 MTR_6g014200 25.437 515 298 20 3 473 5 477 2.69e-31 126
MS.gene038258.t1 MTR_7g013260 22.505 471 320 15 7 471 8 439 2.95e-31 125
MS.gene038258.t1 MTR_5g031830 25.600 500 299 16 5 472 12 470 3.78e-31 125
MS.gene038258.t1 MTR_8g088560 25.458 491 296 16 5 470 10 455 5.31e-31 125
MS.gene038258.t1 MTR_6g013900 25.888 394 233 14 109 475 121 482 5.69e-31 125
MS.gene038258.t1 MTR_7g080950 23.447 499 308 16 3 477 4 452 7.22e-31 124
MS.gene038258.t1 MTR_7g080940 24.803 508 288 18 3 476 9 456 8.24e-31 124
MS.gene038258.t1 MTR_7g039550 30.627 271 160 7 213 469 2 258 8.57e-31 120
MS.gene038258.t1 MTR_8g032950 26.899 316 200 10 172 470 177 478 1.00e-30 124
MS.gene038258.t1 MTR_3g084530 25.253 495 311 19 7 472 8 472 2.25e-30 123
MS.gene038258.t1 MTR_5g098960 31.034 348 194 13 113 449 111 423 2.28e-30 123
MS.gene038258.t1 MTR_8g090095 31.963 219 134 7 259 472 271 479 2.87e-30 123
MS.gene038258.t1 MTR_5g031860 26.253 499 296 17 5 472 12 469 4.07e-30 122
MS.gene038258.t1 MTR_3g084520 25.153 489 297 18 7 461 8 461 7.65e-30 122
MS.gene038258.t1 MTR_0477s0010 26.776 366 201 11 122 473 5 317 1.55e-29 118
MS.gene038258.t1 MTR_8g043470 25.063 395 226 11 92 469 33 374 5.14e-29 118
MS.gene038258.t1 MTR_8g009840 32.900 231 140 5 245 468 299 521 6.83e-29 119
MS.gene038258.t1 MTR_5g027210 24.297 498 281 16 5 448 4 459 1.14e-28 118
MS.gene038258.t1 MTR_7g470610 30.619 307 159 13 116 406 2 270 2.20e-28 114
MS.gene038258.t1 MTR_7g070583 30.619 307 159 13 116 406 2 270 2.20e-28 114
MS.gene038258.t1 MTR_6g014190 28.819 288 171 8 195 473 25 287 2.79e-28 114
MS.gene038258.t1 MTR_2g046620 32.443 262 142 11 197 449 204 439 2.88e-28 117
MS.gene038258.t1 MTR_2086s0010 31.980 197 109 3 283 477 3 176 3.41e-28 110
MS.gene038258.t1 MTR_1996s0010 31.980 197 109 3 283 477 3 176 3.41e-28 110
MS.gene038258.t1 MTR_8g007565 28.333 360 196 14 113 446 116 439 6.74e-28 116
MS.gene038258.t1 MTR_4g123553 33.591 259 137 12 200 449 206 438 9.58e-28 115
MS.gene038258.t1 MTR_8g007650 28.333 360 196 14 113 446 116 439 1.33e-27 115
MS.gene038258.t1 MTR_6g014240 24.750 501 283 17 2 469 4 443 1.39e-27 115
MS.gene038258.t1 MTR_8g007585 30.275 218 126 4 258 473 199 392 1.45e-27 114
MS.gene038258.t1 MTR_8g068330 26.190 504 299 22 2 476 5 464 5.74e-27 113
MS.gene038258.t1 MTR_7g071050 24.738 477 270 18 3 455 11 422 3.01e-26 110
MS.gene038258.t1 MTR_5g066410 26.716 408 226 13 61 446 59 415 1.02e-25 109
MS.gene038258.t1 MTR_2g008225 32.184 261 138 12 202 449 209 443 1.02e-25 110
MS.gene038258.t1 MTR_0078s0200 27.900 319 203 9 2 307 3 307 3.14e-25 105
MS.gene038258.t1 MTR_2g008220 25.902 471 287 21 2 449 11 442 3.41e-25 108
MS.gene038258.t1 MTR_8g068360 25.806 465 299 17 2 449 9 444 3.49e-25 108
MS.gene038258.t1 MTR_2g008226 31.076 251 142 11 205 449 222 447 8.17e-25 107
MS.gene038258.t1 MTR_8g068340 25.470 479 284 19 2 449 9 445 1.61e-24 106
MS.gene038258.t1 MTR_4g128720 24.476 429 278 15 52 472 65 455 2.12e-24 105
MS.gene038258.t1 MTR_2g014900 29.520 271 158 6 205 470 208 450 3.69e-24 105
MS.gene038258.t1 MTR_7g067120 24.641 487 284 21 2 472 6 425 2.11e-23 102
MS.gene038258.t1 MTR_4g077960 30.385 260 142 12 201 449 184 415 8.36e-23 100
MS.gene038258.t1 MTR_3g009500 30.403 273 166 12 1 257 1 265 2.14e-22 97.1
MS.gene038258.t1 MTR_6g036650 32.171 258 140 11 201 449 217 448 2.48e-22 100
MS.gene038258.t1 MTR_4g079270 27.931 290 171 8 181 465 191 447 3.73e-22 99.4
MS.gene038258.t1 MTR_7g070995 37.692 130 77 2 345 470 13 142 4.47e-22 93.2
MS.gene038258.t1 MTR_6g042310 25.373 469 289 19 1 449 14 441 5.61e-22 99.0
MS.gene038258.t1 MTR_5g072850 29.412 204 107 4 197 392 148 322 1.06e-21 97.1
MS.gene038258.t1 MTR_7g070760 31.628 215 95 6 204 406 28 202 3.36e-21 92.0
MS.gene038258.t1 MTR_4g079250 27.875 287 175 6 181 465 191 447 6.44e-21 95.5
MS.gene038258.t1 MTR_8g006230 28.125 224 150 6 88 307 31 247 8.86e-21 92.8
MS.gene038258.t1 MTR_5g066390 31.126 151 90 2 325 473 77 215 9.79e-21 90.9
MS.gene038258.t1 MTR_0536s0030 35.762 151 88 7 328 470 200 349 2.02e-20 92.8
MS.gene038258.t1 MTR_5g090680 100.000 42 0 0 1 42 1 42 3.48e-20 86.3
MS.gene038258.t1 MTR_3g435310 32.195 205 114 7 248 449 215 397 7.94e-20 92.0
MS.gene038258.t1 MTR_8g056740 28.105 306 152 14 111 406 55 302 9.35e-20 91.7
MS.gene038258.t1 MTR_6g014185 26.545 275 142 7 206 473 124 345 2.17e-19 90.1
MS.gene038258.t1 MTR_6g014000 31.818 154 85 5 324 474 21 157 3.99e-19 90.5
MS.gene038258.t1 MTR_4g059370 29.108 213 134 6 259 469 188 385 5.81e-19 89.0
MS.gene038258.t1 MTR_7g067330 23.935 493 290 21 2 477 6 430 8.58e-19 89.0
MS.gene038258.t1 MTR_1g090270 29.258 229 138 8 233 457 238 446 1.84e-18 88.2
MS.gene038258.t1 MTR_5g090590 74.074 54 14 0 401 454 1 54 1.93e-18 79.7
MS.gene038258.t1 MTR_6g014160 25.141 354 185 14 109 440 104 399 2.54e-18 87.0
MS.gene038258.t1 MTR_3g009520 27.907 258 155 12 6 243 7 253 4.33e-18 84.3
MS.gene038258.t1 MTR_1g107325 31.250 160 100 3 304 461 190 341 5.49e-18 85.9
MS.gene038258.t1 MTR_2g083430 31.008 258 150 10 202 456 206 438 1.55e-17 85.1
MS.gene038258.t1 MTR_2g083480 28.761 226 138 6 233 456 234 438 7.91e-17 83.2
MS.gene038258.t1 MTR_6g052375 30.319 188 102 6 171 350 28 194 2.61e-14 74.3
MS.gene038258.t1 MTR_2g083380 28.030 264 164 7 195 456 216 455 3.28e-14 75.1
MS.gene038258.t1 MTR_2g083420 26.070 257 140 9 202 456 206 414 3.96e-13 71.6
MS.gene038258.t1 MTR_6g014186 20.744 511 291 20 2 473 4 439 1.31e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038258.t1 AT3G21760 44.399 491 250 9 3 477 2 485 2.41e-138 407
MS.gene038258.t1 AT3G21790 41.684 487 265 10 3 476 2 482 5.71e-128 381
MS.gene038258.t1 AT3G21750 40.041 482 270 8 3 476 2 472 3.87e-127 378
MS.gene038258.t1 AT3G21780 41.996 481 264 8 3 477 2 473 1.72e-126 376
MS.gene038258.t1 AT4G15280 42.292 480 264 9 3 474 2 476 1.74e-124 371
MS.gene038258.t1 AT4G15280 42.292 480 264 9 3 474 34 508 3.93e-124 372
MS.gene038258.t1 AT3G21800 40.562 498 257 13 1 477 1 480 1.47e-120 361
MS.gene038258.t1 AT1G07250 41.529 484 252 11 1 469 2 469 6.69e-119 357
MS.gene038258.t1 AT1G07240 39.666 479 256 10 1 461 1 464 1.42e-112 341
MS.gene038258.t1 AT2G29730 39.834 482 254 12 1 469 1 459 1.28e-111 338
MS.gene038258.t1 AT2G29740 38.889 486 262 14 2 470 5 472 1.68e-109 333
MS.gene038258.t1 AT4G15260 44.110 365 195 6 116 477 1 359 4.94e-108 325
MS.gene038258.t1 AT1G07260 38.320 488 267 13 3 474 4 473 1.94e-106 325
MS.gene038258.t1 AT2G29710 38.843 484 256 13 1 469 1 459 7.13e-104 318
MS.gene038258.t1 AT2G29750 38.086 491 272 14 2 477 5 478 3.44e-100 309
MS.gene038258.t1 AT3G16520 31.950 482 291 13 1 470 1 457 3.32e-77 249
MS.gene038258.t1 AT3G16520 31.557 469 284 13 1 457 1 444 7.59e-74 239
MS.gene038258.t1 AT3G16520 31.557 469 284 13 1 457 1 444 8.30e-74 240
MS.gene038258.t1 AT4G01070 32.558 473 293 12 2 465 5 460 5.28e-72 236
MS.gene038258.t1 AT5G66690 31.557 488 270 19 1 460 3 454 9.67e-69 227
MS.gene038258.t1 AT1G01420 33.121 471 286 11 5 465 11 462 1.94e-68 227
MS.gene038258.t1 AT1G01420 33.121 471 286 11 5 465 8 459 1.98e-68 226
MS.gene038258.t1 AT4G36770 32.265 468 269 14 8 455 7 446 6.46e-66 219
MS.gene038258.t1 AT5G26310 30.204 490 291 16 1 468 3 463 1.44e-65 219
MS.gene038258.t1 AT3G50740 29.899 495 296 18 1 470 3 471 2.35e-64 216
MS.gene038258.t1 AT1G01390 31.568 472 301 10 5 469 8 464 1.32e-62 211
MS.gene038258.t1 AT1G01390 31.568 472 301 10 5 469 25 481 1.96e-62 211
MS.gene038258.t1 AT2G18570 30.816 490 283 17 1 465 1 459 1.45e-61 208
MS.gene038258.t1 AT2G36760 29.470 509 288 22 7 476 16 492 1.24e-53 188
MS.gene038258.t1 AT2G36770 27.416 507 301 20 7 476 16 492 3.76e-52 184
MS.gene038258.t1 AT2G36750 27.879 495 309 14 7 474 12 485 4.13e-51 181
MS.gene038258.t1 AT2G36780 28.231 503 298 18 7 474 16 490 6.12e-51 181
MS.gene038258.t1 AT2G15480 29.293 495 301 14 2 470 7 478 3.19e-50 178
MS.gene038258.t1 AT2G15480 28.911 505 300 14 2 470 7 488 3.32e-50 178
MS.gene038258.t1 AT2G18560 30.457 394 235 13 86 465 1 369 9.04e-50 174
MS.gene038258.t1 AT5G12890 28.487 509 294 19 2 473 7 482 1.27e-48 174
MS.gene038258.t1 AT2G15490 29.039 489 305 14 6 470 8 478 4.36e-48 172
MS.gene038258.t1 AT2G36800 27.327 505 299 20 7 473 14 488 1.16e-47 172
MS.gene038258.t1 AT2G15490 29.039 489 302 15 6 470 8 475 1.23e-47 171
MS.gene038258.t1 AT2G36790 28.370 497 305 17 7 474 15 489 3.03e-45 165
MS.gene038258.t1 AT3G46670 28.395 486 282 20 6 472 10 448 9.69e-45 163
MS.gene038258.t1 AT5G59590 27.859 481 297 16 1 470 6 447 1.65e-44 162
MS.gene038258.t1 AT4G34131 26.931 505 299 16 2 470 7 477 4.57e-44 162
MS.gene038258.t1 AT5G59580 27.349 479 297 17 3 470 7 445 9.38e-44 160
MS.gene038258.t1 AT1G22400 28.211 475 277 16 2 446 10 450 1.93e-43 160
MS.gene038258.t1 AT3G46660 27.950 483 296 18 3 472 12 455 3.05e-43 159
MS.gene038258.t1 AT3G46700 26.380 489 294 14 1 472 5 444 3.30e-42 155
MS.gene038258.t1 AT4G34138 26.938 516 281 16 3 470 9 476 4.82e-42 156
MS.gene038258.t1 AT1G78270 27.961 515 285 20 2 473 10 481 7.33e-42 155
MS.gene038258.t1 AT3G53160 27.327 505 302 18 7 475 10 485 7.83e-42 155
MS.gene038258.t1 AT3G46650 26.360 478 293 16 3 473 8 433 1.03e-41 154
MS.gene038258.t1 AT1G22380 27.038 503 305 15 2 473 10 481 1.23e-41 155
MS.gene038258.t1 AT3G46690 26.220 492 296 16 1 472 5 449 4.11e-41 153
MS.gene038258.t1 AT4G34135 28.051 467 269 17 2 434 8 441 4.65e-41 153
MS.gene038258.t1 AT2G31790 27.642 492 273 15 2 461 5 445 2.41e-40 151
MS.gene038258.t1 AT1G22360 26.640 503 307 14 2 473 7 478 3.32e-40 151
MS.gene038258.t1 AT1G22340 26.148 501 289 14 2 464 10 467 6.02e-40 150
MS.gene038258.t1 AT4G01070 30.398 352 229 9 2 347 5 346 7.43e-40 147
MS.gene038258.t1 AT1G22360 27.477 444 275 11 2 417 7 431 1.09e-38 147
MS.gene038258.t1 AT4G15500 25.791 411 253 12 84 474 86 464 1.14e-38 147
MS.gene038258.t1 AT2G30140 26.273 491 290 17 5 474 13 452 1.32e-38 146
MS.gene038258.t1 AT1G51210 28.421 475 252 18 3 448 18 433 1.98e-38 145
MS.gene038258.t1 AT2G30140 26.220 492 290 17 5 474 13 453 2.05e-38 145
MS.gene038258.t1 AT5G38010 28.306 484 291 20 2 469 7 450 2.13e-38 145
MS.gene038258.t1 AT1G22370 28.935 432 261 14 2 408 10 420 2.56e-38 145
MS.gene038258.t1 AT2G31750 24.950 501 295 16 3 473 6 455 3.50e-38 145
MS.gene038258.t1 AT2G31750 24.802 504 298 16 3 476 6 458 3.81e-38 145
MS.gene038258.t1 AT1G73880 27.600 500 291 19 3 474 12 468 7.21e-38 144
MS.gene038258.t1 AT2G30150 27.848 474 280 15 5 461 13 441 9.52e-38 144
MS.gene038258.t1 AT3G21560 25.347 505 292 16 5 470 12 470 1.00e-37 144
MS.gene038258.t1 AT3G11340 26.775 493 287 16 3 474 7 446 1.65e-37 143
MS.gene038258.t1 AT3G55710 26.747 501 290 15 2 474 5 456 1.81e-37 143
MS.gene038258.t1 AT3G55700 31.541 279 158 6 201 474 202 452 5.42e-37 142
MS.gene038258.t1 AT2G30150 27.660 470 278 15 9 461 1 425 6.20e-37 141
MS.gene038258.t1 AT4G15480 27.704 379 240 10 95 461 111 467 1.04e-36 141
MS.gene038258.t1 AT1G05680 25.257 487 285 14 4 461 5 441 2.35e-36 140
MS.gene038258.t1 AT5G05870 27.778 486 294 19 5 472 8 454 3.09e-36 140
MS.gene038258.t1 AT3G53150 24.905 526 315 17 2 477 19 514 6.03e-36 140
MS.gene038258.t1 AT5G03490 26.506 498 282 20 2 469 16 459 7.65e-36 139
MS.gene038258.t1 AT3G46680 25.880 483 307 16 2 472 6 449 8.90e-36 138
MS.gene038258.t1 AT2G23260 28.151 476 286 17 2 461 7 442 9.59e-36 138
MS.gene038258.t1 AT4G15270 35.071 211 127 5 3 205 2 210 3.04e-35 131
MS.gene038258.t1 AT1G05675 25.562 489 281 15 4 461 5 441 3.17e-35 137
MS.gene038258.t1 AT4G15270 33.929 224 138 5 3 218 2 223 3.65e-35 133
MS.gene038258.t1 AT2G16890 27.347 490 287 20 6 465 10 460 2.07e-34 135
MS.gene038258.t1 AT5G14860 27.668 506 286 22 7 472 10 475 2.13e-34 135
MS.gene038258.t1 AT5G17050 28.429 401 240 13 85 474 94 458 2.48e-34 134
MS.gene038258.t1 AT3G02100 23.952 501 312 15 1 477 9 464 3.01e-34 134
MS.gene038258.t1 AT2G36970 27.599 279 173 6 201 476 222 474 4.92e-34 134
MS.gene038258.t1 AT4G15490 26.566 399 247 11 94 475 100 469 5.38e-34 134
MS.gene038258.t1 AT2G43820 25.852 499 292 19 2 475 4 449 2.33e-33 131
MS.gene038258.t1 AT2G23250 30.000 390 232 14 94 472 76 435 3.30e-33 130
MS.gene038258.t1 AT5G38040 25.966 466 287 17 15 465 20 442 2.28e-32 129
MS.gene038258.t1 AT5G05880 25.462 487 296 15 6 472 9 448 4.78e-32 127
MS.gene038258.t1 AT1G06000 27.033 492 267 16 2 469 7 430 5.07e-32 127
MS.gene038258.t1 AT4G15550 28.084 381 237 14 105 473 119 474 5.40e-32 128
MS.gene038258.t1 AT5G17030 28.492 358 218 7 125 474 130 457 7.25e-32 127
MS.gene038258.t1 AT1G24100 24.048 499 301 15 3 472 9 458 1.38e-31 126
MS.gene038258.t1 AT2G28080 26.650 409 247 11 85 477 105 476 3.85e-31 125
MS.gene038258.t1 AT1G22370 34.510 255 132 9 171 408 14 250 3.90e-31 122
MS.gene038258.t1 AT4G15270 36.316 190 111 5 3 184 2 189 1.83e-30 118
MS.gene038258.t1 AT4G14090 26.052 499 284 18 2 470 10 453 3.04e-30 122
MS.gene038258.t1 AT1G05560 24.744 489 319 14 1 475 1 454 4.32e-30 122
MS.gene038258.t1 AT2G26480 26.518 494 301 19 1 478 4 451 7.34e-30 121
MS.gene038258.t1 AT5G17040 27.228 404 240 10 83 474 80 441 7.38e-30 121
MS.gene038258.t1 AT1G05560 24.949 493 313 14 1 475 51 504 7.96e-30 122
MS.gene038258.t1 AT3G46720 25.673 483 299 20 2 472 6 440 9.43e-30 121
MS.gene038258.t1 AT5G05860 25.259 483 302 16 6 473 10 448 9.58e-30 121
MS.gene038258.t1 AT3G29630 26.285 506 276 18 3 476 4 444 1.50e-29 120
MS.gene038258.t1 AT1G10400 25.000 508 301 20 1 474 3 464 2.44e-29 120
MS.gene038258.t1 AT1G30530 27.654 405 243 14 82 474 86 452 4.14e-29 119
MS.gene038258.t1 AT5G54010 25.904 498 295 18 3 478 4 449 4.65e-29 119
MS.gene038258.t1 AT2G43840 23.984 492 302 16 3 472 5 446 8.64e-29 118
MS.gene038258.t1 AT2G16890 27.400 427 249 17 6 405 10 402 1.26e-28 117
MS.gene038258.t1 AT2G43840 23.780 492 303 16 3 472 5 446 2.99e-28 117
MS.gene038258.t1 AT5G05900 26.166 493 284 19 6 472 9 447 3.39e-28 117
MS.gene038258.t1 AT1G05530 24.895 474 312 16 1 461 1 443 7.78e-28 115
MS.gene038258.t1 AT1G50580 26.639 488 299 15 3 478 4 444 1.10e-27 115
MS.gene038258.t1 AT1G64910 31.488 289 171 9 192 478 180 443 1.57e-27 115
MS.gene038258.t1 AT5G49690 30.620 258 144 8 197 449 205 432 2.70e-27 114
MS.gene038258.t1 AT4G27560 30.435 276 167 6 203 477 197 448 2.88e-27 114
MS.gene038258.t1 AT5G17040 27.811 338 206 8 145 474 32 339 4.49e-27 112
MS.gene038258.t1 AT5G05890 29.670 273 163 9 204 472 205 452 6.35e-27 113
MS.gene038258.t1 AT3G29630 25.347 505 256 16 3 476 4 418 8.60e-27 112
MS.gene038258.t1 AT5G37950 27.914 326 206 13 62 377 34 340 1.31e-26 110
MS.gene038258.t1 AT5G53990 29.412 289 177 7 192 478 180 443 1.50e-26 112
MS.gene038258.t1 AT4G27570 30.072 276 168 6 203 477 197 448 2.40e-26 111
MS.gene038258.t1 AT1G64920 27.891 294 179 6 192 478 180 447 1.54e-25 109
MS.gene038258.t1 AT5G37950 27.692 325 202 13 62 377 34 334 1.97e-25 107
MS.gene038258.t1 AT3G22250 24.597 496 298 18 2 465 5 456 1.24e-24 106
MS.gene038258.t1 AT5G54060 23.958 480 313 15 6 468 14 458 4.42e-24 105
MS.gene038258.t1 AT2G22930 28.214 280 176 7 192 470 180 435 3.58e-23 102
MS.gene038258.t1 AT5G65550 23.779 471 282 18 3 442 7 431 4.04e-23 102
MS.gene038258.t1 AT4G09500 28.214 280 176 8 192 470 180 435 5.04e-22 99.0
MS.gene038258.t1 AT2G22590 25.212 472 289 20 3 448 13 446 6.07e-22 99.0
MS.gene038258.t1 AT4G09500 31.220 205 121 4 267 470 225 410 2.31e-20 93.6
MS.gene038258.t1 AT4G34135 25.223 337 203 14 2 306 8 327 2.95e-16 80.5

Find 129 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGGTCCTACCGGATATA+TGG 0.222214 5.4:+71543347 None:intergenic
GCAGAGATTGGAAGGGTTAT+TGG 0.226703 5.4:-71543042 MS.gene038258:CDS
GATTATAGGTTAGAGTTTAA+TGG 0.259060 5.4:-71542829 MS.gene038258:CDS
ATCAACCGTGCCCTTGGTTT+TGG 0.262975 5.4:+71543311 None:intergenic
CGGAAGTTATATTGGAGTTT+GGG 0.278626 5.4:+71543832 None:intergenic
ACACTGGAGAGCATATATTT+TGG 0.281957 5.4:-71542946 MS.gene038258:CDS
CCGGAAGTTATATTGGAGTT+TGG 0.282700 5.4:+71543831 None:intergenic
TGGAGATCGCATTAGATTAT+AGG 0.291349 5.4:-71542843 MS.gene038258:CDS
CTCACTAAAGCACCAGAAAA+TGG 0.294302 5.4:-71543753 MS.gene038258:CDS
GGTCGATTATATTATGAATC+AGG 0.307782 5.4:-71542647 MS.gene038258:CDS
TTGGTCTCGGGGTTTAATAT+TGG 0.319170 5.4:+71543330 None:intergenic
GAACTGGGCAAAGTGTTTAA+AGG 0.321849 5.4:+71543516 None:intergenic
GCACTTGCTGTAGAGAATAC+TGG 0.330365 5.4:-71543183 MS.gene038258:CDS
CACCATGCCGGAAGTTATAT+TGG 0.331868 5.4:+71543824 None:intergenic
ACTTCTGGTGTTGCTTTCCT+TGG 0.334751 5.4:-71543642 MS.gene038258:CDS
ACAAGATTGAGAGAGGAATA+AGG 0.341706 5.4:-71542780 MS.gene038258:CDS
TTCAAATGAATTGACAATAA+TGG 0.344990 5.4:+71543428 None:intergenic
ACGCTCGTCTTCTTCACTTC+TGG 0.350790 5.4:-71543657 MS.gene038258:CDS
TTCCTTGCGTAGCACTGAAC+TGG 0.352734 5.4:+71543500 None:intergenic
GGGCTAGTATCTGCGTCTGT+GGG 0.377865 5.4:+71543013 None:intergenic
CACTCTTTCTGATTTGAGTT+CGG 0.381866 5.4:-71543094 MS.gene038258:CDS
GGATCTTCTTACACTTATCT+AGG 0.393330 5.4:-71542676 MS.gene038258:CDS
CGTTTGGTTTCTGAGCTTTG+AGG 0.405726 5.4:+71543796 None:intergenic
TTTCGATGAGGATCAGGTTA+AGG 0.406563 5.4:-71543211 MS.gene038258:CDS
GTCTCTCATCCTGATCTAGC+AGG 0.409076 5.4:-71543375 MS.gene038258:CDS
TACCAGAAGGATTCTTAGAT+AGG 0.410938 5.4:-71543068 MS.gene038258:CDS
TTCTGGTGCTTTAGTGAGGT+TGG 0.413166 5.4:+71543758 None:intergenic
GTCCTATCTAAGAATCCTTC+TGG 0.415809 5.4:+71543066 None:intergenic
TTTCCTCTGCTTCGGGAGCA+GGG 0.418747 5.4:-71543238 MS.gene038258:CDS
AATAAGGAGTGTGTTGGATA+AGG 0.419886 5.4:-71542764 MS.gene038258:CDS
GAAACAAATCCTCCCGTGGC+TGG 0.426763 5.4:+71542988 None:intergenic
TTACACTTATCTAGGTCGTT+TGG 0.429867 5.4:-71542668 MS.gene038258:CDS
GATTTGTTTCTCATTGTGGC+TGG 0.434050 5.4:-71542975 MS.gene038258:CDS
TATTCCTCTCTCAATCTTGT+CGG 0.438941 5.4:+71542783 None:intergenic
CACTTGCTGTAGAGAATACT+GGG 0.441154 5.4:-71543182 MS.gene038258:CDS
TTAGATAGGACAGCAGAGAT+TGG 0.443728 5.4:-71543054 MS.gene038258:CDS
AGGAGTGTGTTGGATAAGGA+TGG 0.460546 5.4:-71542760 MS.gene038258:CDS
TTCAGTGCTACGCAAGGAAT+GGG 0.464025 5.4:-71543496 MS.gene038258:CDS
GGTGCATTCATTGTGTCCTT+AGG 0.464577 5.4:+71543126 None:intergenic
ATTGGTCCTACCGGATATAT+GGG 0.465797 5.4:+71543348 None:intergenic
GGAACCGAGTTAGCGAAACT+TGG 0.466835 5.4:+71543537 None:intergenic
TACGTAGAGACCACACAAAT+CGG 0.468167 5.4:+71543157 None:intergenic
GTCAGAATCAACCGTGCCCT+TGG 0.474106 5.4:+71543305 None:intergenic
CATCCCAAGTTTCGCTAACT+CGG 0.475586 5.4:-71543541 MS.gene038258:CDS
TGGGCTAGTATCTGCGTCTG+TGG 0.478572 5.4:+71543012 None:intergenic
ATGGGTAAACCTGCTAGATC+AGG 0.478732 5.4:+71543366 None:intergenic
CCAAACTCCAATATAACTTC+CGG 0.487273 5.4:-71543831 MS.gene038258:CDS
ATAGGACAGCAGAGATTGGA+AGG 0.491561 5.4:-71543050 MS.gene038258:CDS
GAGAGGAATAAGGAGTGTGT+TGG 0.494443 5.4:-71542770 MS.gene038258:CDS
AGCAGGTTTACCCATATATC+CGG 0.494510 5.4:-71543358 MS.gene038258:CDS
ATTATCCCTTCACCTGGTGT+TGG 0.499606 5.4:-71544029 MS.gene038258:CDS
CAAATCCTCCCGTGGCTGGG+TGG 0.501508 5.4:+71542992 None:intergenic
AAGTGAAGAAGACGAGCGTA+GGG 0.504330 5.4:+71543661 None:intergenic
TGCTTTAGTGAGGTTGGAGA+CGG 0.505673 5.4:+71543764 None:intergenic
TGGATAAGGATGGAGAAGTA+AGG 0.514860 5.4:-71542750 MS.gene038258:CDS
GGAGGATTTGTTTCTCATTG+TGG 0.517285 5.4:-71542979 MS.gene038258:CDS
GGGTTTAATATTGGTCCTAC+CGG 0.518714 5.4:+71543339 None:intergenic
GTTCAGTGCTACGCAAGGAA+TGG 0.520679 5.4:-71543497 MS.gene038258:CDS
TTCATTGTGTCCTTAGGTGG+TGG 0.520774 5.4:+71543132 None:intergenic
AGATTGGAAGGGTTATTGGA+TGG 0.522495 5.4:-71543038 MS.gene038258:CDS
AAATCCTCCCGTGGCTGGGT+GGG 0.528133 5.4:+71542993 None:intergenic
AAACAAATCCTCCCGTGGCT+GGG 0.529309 5.4:+71542989 None:intergenic
ATACTAGCCCACCCAGCCAC+GGG 0.530619 5.4:-71543000 MS.gene038258:CDS
GTTGCTGCAGCAGACTGAGT+TGG 0.535680 5.4:-71543565 MS.gene038258:CDS
TTCTTCATGAGCTATGCAAA+AGG 0.537115 5.4:-71543468 MS.gene038258:CDS
TGATGATCAACCTCCTTCCT+CGG 0.538418 5.4:-71543265 MS.gene038258:CDS
CAGAGGAAAACCACCGAGGA+AGG 0.539347 5.4:+71543252 None:intergenic
GAAGTGAAGAAGACGAGCGT+AGG 0.542036 5.4:+71543660 None:intergenic
TTCCTCTGCTTCGGGAGCAG+GGG 0.544751 5.4:-71543237 MS.gene038258:CDS
TCCTTGCGTAGCACTGAACT+GGG 0.547109 5.4:+71543501 None:intergenic
TCTACGTAAACCACCACCTA+AGG 0.548629 5.4:-71543142 MS.gene038258:CDS
GATTGGAAGGGTTATTGGAT+GGG 0.551131 5.4:-71543037 MS.gene038258:CDS
TAAGAGAATCATCGATGGGA+AGG 0.551825 5.4:+71543886 None:intergenic
GATACTAGCCCACCCAGCCA+CGG 0.559516 5.4:-71543001 MS.gene038258:CDS
CCGTCTCAGAATAACTGTCT+TGG 0.560275 5.4:-71543955 MS.gene038258:CDS
AACCCCTGCTCCCGAAGCAG+AGG 0.570079 5.4:+71543235 None:intergenic
ATTCTGACAATATTGTCAAG+TGG 0.574295 5.4:-71543290 MS.gene038258:CDS
GCCCAGTTCAGTGCTACGCA+AGG 0.574489 5.4:-71543502 MS.gene038258:CDS
GACAAAGGAGTGAACGGCAT+AGG 0.577147 5.4:+71543395 None:intergenic
GCATTCATTGTGTCCTTAGG+TGG 0.581118 5.4:+71543129 None:intergenic
TTAGAAGCTTTGCGAACTCG+AGG 0.581255 5.4:+71543991 None:intergenic
GAACCGAGTTAGCGAAACTT+GGG 0.583590 5.4:+71543538 None:intergenic
CTCCAATATAACTTCCGGCA+TGG 0.584154 5.4:-71543826 MS.gene038258:CDS
AGATGACCAACACCAGGTGA+AGG 0.584388 5.4:+71544023 None:intergenic
GGAAGTTATATTGGAGTTTG+GGG 0.586075 5.4:+71543833 None:intergenic
TCAGAAAGAGTGTAATCAGA+TGG 0.589903 5.4:+71543105 None:intergenic
TTTGAGGAGATCCACCATGC+CGG 0.590086 5.4:+71543812 None:intergenic
TTATTCTGAGACGGTTATCA+CGG 0.590203 5.4:+71543964 None:intergenic
GACGTTAAGAGAATCATCGA+TGG 0.592691 5.4:+71543881 None:intergenic
CCAAGACAGTTATTCTGAGA+CGG 0.594215 5.4:+71543955 None:intergenic
TAGATCAGGATGAGAGACAA+AGG 0.601219 5.4:+71543380 None:intergenic
AAGAGAATCATCGATGGGAA+GGG 0.601277 5.4:+71543887 None:intergenic
TTGGTGTGCTCGTTGCCACA+TGG 0.604208 5.4:-71542927 MS.gene038258:CDS
GGCTAGTATCTGCGTCTGTG+GGG 0.607264 5.4:+71543014 None:intergenic
ATGAGAGACAAAGGAGTGAA+CGG 0.613269 5.4:+71543389 None:intergenic
ATGTGAGCTGAAGATGGCTG+TGG 0.613344 5.4:-71542863 MS.gene038258:CDS
TAATGGCATCAGCATTCTTG+AGG 0.613506 5.4:+71543445 None:intergenic
GATGACCAACACCAGGTGAA+GGG 0.614413 5.4:+71544024 None:intergenic
ACGTTAAGAGAATCATCGAT+GGG 0.616411 5.4:+71543882 None:intergenic
ACATCGGTTTCAGTTGTGTG+TGG 0.616808 5.4:+71543921 None:intergenic
AAGCTTTGCGAACTCGAGGG+TGG 0.617854 5.4:+71543995 None:intergenic
TAGAAGCTTTGCGAACTCGA+GGG 0.620722 5.4:+71543992 None:intergenic
GTGGTGATTATCCCTTCACC+TGG 0.627475 5.4:-71544035 MS.gene038258:CDS
TTGTGGCTGGAATTCCACAC+TGG 0.627530 5.4:-71542962 MS.gene038258:CDS
CGAGACCAAAACCAAGGGCA+CGG 0.628750 5.4:-71543316 MS.gene038258:CDS
ATTGGTATGTGAGCTGAAGA+TGG 0.630433 5.4:-71542869 MS.gene038258:CDS
CAATATAACTTCCGGCATGG+TGG 0.630765 5.4:-71543823 MS.gene038258:CDS
ACTGCCGACAAGATTGAGAG+AGG 0.631783 5.4:-71542787 MS.gene038258:CDS
TGATCAACCTCCTTCCTCGG+TGG 0.633817 5.4:-71543262 MS.gene038258:CDS
AGGAAAACCACCGAGGAAGG+AGG 0.634204 5.4:+71543255 None:intergenic
GGTTTACCCATATATCCGGT+AGG 0.636875 5.4:-71543354 MS.gene038258:CDS
AGTCTGCTGCAGCAACTGAG+TGG 0.639412 5.4:+71543572 None:intergenic
GTTTGTTGATCAGCAAAGAG+CGG 0.639420 5.4:+71542904 None:intergenic
AAAATATATGCTCTCCAGTG+TGG 0.642196 5.4:+71542948 None:intergenic
TAGGACAGCAGAGATTGGAA+GGG 0.642220 5.4:-71543049 MS.gene038258:CDS
AAGGGATTTAGTGTAGACAT+CGG 0.643470 5.4:+71543905 None:intergenic
GAATATGAAGATTCAAACCA+AGG 0.643912 5.4:+71543625 None:intergenic
CTAGCCCACCCAGCCACGGG+AGG 0.653053 5.4:-71542997 MS.gene038258:CDS
CGAGTTAGCGAAACTTGGGA+TGG 0.662566 5.4:+71543542 None:intergenic
AACCCCGAGACCAAAACCAA+GGG 0.671262 5.4:-71543321 MS.gene038258:CDS
ATCAGCAAAGAGCGGCCATG+TGG 0.673394 5.4:+71542912 None:intergenic
ATACTGGGGTCCGATTTGTG+TGG 0.673837 5.4:-71543167 MS.gene038258:CDS
AAACCCCGAGACCAAAACCA+AGG 0.674614 5.4:-71543322 MS.gene038258:CDS
ATGAGAAACAAATCCTCCCG+TGG 0.678028 5.4:+71542984 None:intergenic
GAAACTAGATGACCAACACC+AGG 0.690233 5.4:+71544017 None:intergenic
GAAGTTATATTGGAGTTTGG+GGG 0.693568 5.4:+71543834 None:intergenic
GAAGCAGAGGAAAACCACCG+AGG 0.742915 5.4:+71543248 None:intergenic
TGTCAACAATGAATGCAGCG+AGG 0.795260 5.4:+71543727 None:intergenic
ACTTGCTGTAGAGAATACTG+GGG 0.804986 5.4:-71543181 MS.gene038258:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAAATGAATTGACAATAA+TGG + chr5.4:71543261-71543280 None:intergenic 20.0%
! GATTATAGGTTAGAGTTTAA+TGG - chr5.4:71543857-71543876 MS.gene038258:CDS 25.0%
!! ACAAACAAATGCTTTTGAAT+TGG - chr5.4:71543799-71543818 MS.gene038258:CDS 25.0%
ATTCTGACAATATTGTCAAG+TGG - chr5.4:71543396-71543415 MS.gene038258:CDS 30.0%
GAATATGAAGATTCAAACCA+AGG + chr5.4:71543064-71543083 None:intergenic 30.0%
GGTCGATTATATTATGAATC+AGG - chr5.4:71544039-71544058 MS.gene038258:CDS 30.0%
! TTCTTTTGCAACATCAATCA+TGG + chr5.4:71542997-71543016 None:intergenic 30.0%
AAAATATATGCTCTCCAGTG+TGG + chr5.4:71543741-71543760 None:intergenic 35.0%
AAGGGATTTAGTGTAGACAT+CGG + chr5.4:71542784-71542803 None:intergenic 35.0%
AAGTAAAAAGACTCTGCTAG+AGG - chr5.4:71543985-71544004 MS.gene038258:CDS 35.0%
ACAAGATTGAGAGAGGAATA+AGG - chr5.4:71543906-71543925 MS.gene038258:CDS 35.0%
ACGTTAAGAGAATCATCGAT+GGG + chr5.4:71542807-71542826 None:intergenic 35.0%
AGTAAAAAGACTCTGCTAGA+GGG - chr5.4:71543986-71544005 MS.gene038258:CDS 35.0%
CCAAACTCCAATATAACTTC+CGG - chr5.4:71542855-71542874 MS.gene038258:CDS 35.0%
CGGAAGTTATATTGGAGTTT+GGG + chr5.4:71542857-71542876 None:intergenic 35.0%
GAAGTTATATTGGAGTTTGG+GGG + chr5.4:71542855-71542874 None:intergenic 35.0%
GGAAGTTATATTGGAGTTTG+GGG + chr5.4:71542856-71542875 None:intergenic 35.0%
GGATCTTCTTACACTTATCT+AGG - chr5.4:71544010-71544029 MS.gene038258:CDS 35.0%
TACCAGAAGGATTCTTAGAT+AGG - chr5.4:71543618-71543637 MS.gene038258:CDS 35.0%
TATTCCTCTCTCAATCTTGT+CGG + chr5.4:71543906-71543925 None:intergenic 35.0%
TGGAGATCGCATTAGATTAT+AGG - chr5.4:71543843-71543862 MS.gene038258:CDS 35.0%
TTACACTTATCTAGGTCGTT+TGG - chr5.4:71544018-71544037 MS.gene038258:CDS 35.0%
TTCTTCATGAGCTATGCAAA+AGG - chr5.4:71543218-71543237 MS.gene038258:CDS 35.0%
! AATAAGGAGTGTGTTGGATA+AGG - chr5.4:71543922-71543941 MS.gene038258:CDS 35.0%
! CACTCTTTCTGATTTGAGTT+CGG - chr5.4:71543592-71543611 MS.gene038258:CDS 35.0%
! TCAGAAAGAGTGTAATCAGA+TGG + chr5.4:71543584-71543603 None:intergenic 35.0%
! TTTTGCAACATCAATCATGG+TGG + chr5.4:71542994-71543013 None:intergenic 35.0%
! TTTTGCATAGCTCATGAAGA+AGG + chr5.4:71543219-71543238 None:intergenic 35.0%
!! ACACTGGAGAGCATATATTT+TGG - chr5.4:71543740-71543759 MS.gene038258:CDS 35.0%
!! TTATTCTGAGACGGTTATCA+CGG + chr5.4:71542725-71542744 None:intergenic 35.0%
AAGAGAATCATCGATGGGAA+GGG + chr5.4:71542802-71542821 None:intergenic 40.0%
AGATTGGAAGGGTTATTGGA+TGG - chr5.4:71543648-71543667 MS.gene038258:CDS 40.0%
AGCAGGTTTACCCATATATC+CGG - chr5.4:71543328-71543347 MS.gene038258:CDS 40.0%
ATGAGAGACAAAGGAGTGAA+CGG + chr5.4:71543300-71543319 None:intergenic 40.0%
ATTGGTATGTGAGCTGAAGA+TGG - chr5.4:71543817-71543836 MS.gene038258:CDS 40.0%
ATTGGTCCTACCGGATATAT+GGG + chr5.4:71543341-71543360 None:intergenic 40.0%
CCGGAAGTTATATTGGAGTT+TGG + chr5.4:71542858-71542877 None:intergenic 40.0%
GACGTTAAGAGAATCATCGA+TGG + chr5.4:71542808-71542827 None:intergenic 40.0%
GATTGGAAGGGTTATTGGAT+GGG - chr5.4:71543649-71543668 MS.gene038258:CDS 40.0%
GGGTTTAATATTGGTCCTAC+CGG + chr5.4:71543350-71543369 None:intergenic 40.0%
GTCCTATCTAAGAATCCTTC+TGG + chr5.4:71543623-71543642 None:intergenic 40.0%
TAAGAGAATCATCGATGGGA+AGG + chr5.4:71542803-71542822 None:intergenic 40.0%
TAATGGCATCAGCATTCTTG+AGG + chr5.4:71543244-71543263 None:intergenic 40.0%
TACGTAGAGACCACACAAAT+CGG + chr5.4:71543532-71543551 None:intergenic 40.0%
TAGATCAGGATGAGAGACAA+AGG + chr5.4:71543309-71543328 None:intergenic 40.0%
TATTGGTCCTACCGGATATA+TGG + chr5.4:71543342-71543361 None:intergenic 40.0%
TGGATAAGGATGGAGAAGTA+AGG - chr5.4:71543936-71543955 MS.gene038258:CDS 40.0%
TTAGATAGGACAGCAGAGAT+TGG - chr5.4:71543632-71543651 MS.gene038258:CDS 40.0%
TTGGTCTCGGGGTTTAATAT+TGG + chr5.4:71543359-71543378 None:intergenic 40.0%
TTTCGATGAGGATCAGGTTA+AGG - chr5.4:71543475-71543494 MS.gene038258:CDS 40.0%
! CCAAGACAGTTATTCTGAGA+CGG + chr5.4:71542734-71542753 None:intergenic 40.0%
! CTCACTAAAGCACCAGAAAA+TGG - chr5.4:71542933-71542952 MS.gene038258:CDS 40.0%
! GAACTGGGCAAAGTGTTTAA+AGG + chr5.4:71543173-71543192 None:intergenic 40.0%
! GATTTGTTTCTCATTGTGGC+TGG - chr5.4:71543711-71543730 MS.gene038258:CDS 40.0%
! GGAGGATTTGTTTCTCATTG+TGG - chr5.4:71543707-71543726 MS.gene038258:CDS 40.0%
! GTTTGTTGATCAGCAAAGAG+CGG + chr5.4:71543785-71543804 None:intergenic 40.0%
! TTGAGTTCGGTTTTACCAGA+AGG - chr5.4:71543605-71543624 MS.gene038258:CDS 40.0%
!! ACTTGCTGTAGAGAATACTG+GGG - chr5.4:71543505-71543524 MS.gene038258:CDS 40.0%
!! CACTTGCTGTAGAGAATACT+GGG - chr5.4:71543504-71543523 MS.gene038258:CDS 40.0%
!! CATTTTCTGGTGCTTTAGTG+AGG + chr5.4:71542935-71542954 None:intergenic 40.0%
AAAAAGACTCTGCTAGAGGG+AGG - chr5.4:71543989-71544008 MS.gene038258:CDS 45.0%
AAGTGAAGAAGACGAGCGTA+GGG + chr5.4:71543028-71543047 None:intergenic 45.0%
ATAGGACAGCAGAGATTGGA+AGG - chr5.4:71543636-71543655 MS.gene038258:CDS 45.0%
ATGAGAAACAAATCCTCCCG+TGG + chr5.4:71543705-71543724 None:intergenic 45.0%
ATGGGTAAACCTGCTAGATC+AGG + chr5.4:71543323-71543342 None:intergenic 45.0%
ATTATCCCTTCACCTGGTGT+TGG - chr5.4:71542657-71542676 MS.gene038258:CDS 45.0%
CAATATAACTTCCGGCATGG+TGG - chr5.4:71542863-71542882 MS.gene038258:CDS 45.0%
CACCATGCCGGAAGTTATAT+TGG + chr5.4:71542865-71542884 None:intergenic 45.0%
CATCCCAAGTTTCGCTAACT+CGG - chr5.4:71543145-71543164 MS.gene038258:CDS 45.0%
CCGTCTCAGAATAACTGTCT+TGG - chr5.4:71542731-71542750 MS.gene038258:CDS 45.0%
CTCCAATATAACTTCCGGCA+TGG - chr5.4:71542860-71542879 MS.gene038258:CDS 45.0%
GAAACTAGATGACCAACACC+AGG + chr5.4:71542672-71542691 None:intergenic 45.0%
GAACCGAGTTAGCGAAACTT+GGG + chr5.4:71543151-71543170 None:intergenic 45.0%
GCAGAGATTGGAAGGGTTAT+TGG - chr5.4:71543644-71543663 MS.gene038258:CDS 45.0%
GCATTCATTGTGTCCTTAGG+TGG + chr5.4:71543560-71543579 None:intergenic 45.0%
GGTGCATTCATTGTGTCCTT+AGG + chr5.4:71543563-71543582 None:intergenic 45.0%
GGTTTACCCATATATCCGGT+AGG - chr5.4:71543332-71543351 MS.gene038258:CDS 45.0%
TAGAAGCTTTGCGAACTCGA+GGG + chr5.4:71542697-71542716 None:intergenic 45.0%
TAGGACAGCAGAGATTGGAA+GGG - chr5.4:71543637-71543656 MS.gene038258:CDS 45.0%
TCTACGTAAACCACCACCTA+AGG - chr5.4:71543544-71543563 MS.gene038258:CDS 45.0%
TGATGATCAACCTCCTTCCT+CGG - chr5.4:71543421-71543440 MS.gene038258:CDS 45.0%
TGCTTTAGTGAGGTTGGAGA+CGG + chr5.4:71542925-71542944 None:intergenic 45.0%
TGTCAACAATGAATGCAGCG+AGG + chr5.4:71542962-71542981 None:intergenic 45.0%
TTAGAAGCTTTGCGAACTCG+AGG + chr5.4:71542698-71542717 None:intergenic 45.0%
TTCAGTGCTACGCAAGGAAT+GGG - chr5.4:71543190-71543209 MS.gene038258:CDS 45.0%
TTCATTGTGTCCTTAGGTGG+TGG + chr5.4:71543557-71543576 None:intergenic 45.0%
TTCTGGTGCTTTAGTGAGGT+TGG + chr5.4:71542931-71542950 None:intergenic 45.0%
TTTGGGGGAAGAGAACATTC+TGG + chr5.4:71542840-71542859 None:intergenic 45.0%
! AGGAGTGTGTTGGATAAGGA+TGG - chr5.4:71543926-71543945 MS.gene038258:CDS 45.0%
! CGTTTGGTTTCTGAGCTTTG+AGG + chr5.4:71542893-71542912 None:intergenic 45.0%
! GAGAGGAATAAGGAGTGTGT+TGG - chr5.4:71543916-71543935 MS.gene038258:CDS 45.0%
!! ACATCGGTTTCAGTTGTGTG+TGG + chr5.4:71542768-71542787 None:intergenic 45.0%
!! ACTTCTGGTGTTGCTTTCCT+TGG - chr5.4:71543044-71543063 MS.gene038258:CDS 45.0%
!! GCACTTGCTGTAGAGAATAC+TGG - chr5.4:71543503-71543522 MS.gene038258:CDS 45.0%
!!! GGGTTTTTTCGATGAGGATC+AGG - chr5.4:71543469-71543488 MS.gene038258:CDS 45.0%
AAACAAATCCTCCCGTGGCT+GGG + chr5.4:71543700-71543719 None:intergenic 50.0%
AAACCCCGAGACCAAAACCA+AGG - chr5.4:71543364-71543383 MS.gene038258:CDS 50.0%
AACCCCGAGACCAAAACCAA+GGG - chr5.4:71543365-71543384 MS.gene038258:CDS 50.0%
ACGCTCGTCTTCTTCACTTC+TGG - chr5.4:71543029-71543048 MS.gene038258:CDS 50.0%
ACTGCCGACAAGATTGAGAG+AGG - chr5.4:71543899-71543918 MS.gene038258:CDS 50.0%
AGATGACCAACACCAGGTGA+AGG + chr5.4:71542666-71542685 None:intergenic 50.0%
ATGTGAGCTGAAGATGGCTG+TGG - chr5.4:71543823-71543842 MS.gene038258:CDS 50.0%
CGAGTTAGCGAAACTTGGGA+TGG + chr5.4:71543147-71543166 None:intergenic 50.0%
GAAGTGAAGAAGACGAGCGT+AGG + chr5.4:71543029-71543048 None:intergenic 50.0%
GACAAAGGAGTGAACGGCAT+AGG + chr5.4:71543294-71543313 None:intergenic 50.0%
GATGACCAACACCAGGTGAA+GGG + chr5.4:71542665-71542684 None:intergenic 50.0%
GGAACCGAGTTAGCGAAACT+TGG + chr5.4:71543152-71543171 None:intergenic 50.0%
GTCTCTCATCCTGATCTAGC+AGG - chr5.4:71543311-71543330 MS.gene038258:CDS 50.0%
GTGGTGATTATCCCTTCACC+TGG - chr5.4:71542651-71542670 MS.gene038258:CDS 50.0%
GTTCAGTGCTACGCAAGGAA+TGG - chr5.4:71543189-71543208 MS.gene038258:CDS 50.0%
TTGTGGCTGGAATTCCACAC+TGG - chr5.4:71543724-71543743 MS.gene038258:CDS 50.0%
TTTGAGGAGATCCACCATGC+CGG + chr5.4:71542877-71542896 None:intergenic 50.0%
! ATACTGGGGTCCGATTTGTG+TGG - chr5.4:71543519-71543538 MS.gene038258:CDS 50.0%
! ATCAACCGTGCCCTTGGTTT+TGG + chr5.4:71543378-71543397 None:intergenic 50.0%
! GAGACGGCTCTTTTGACGTT+TGG + chr5.4:71542909-71542928 None:intergenic 50.0%
! TCCTTGCGTAGCACTGAACT+GGG + chr5.4:71543188-71543207 None:intergenic 50.0%
! TCGGTGGTTTTCCTCTGCTT+CGG - chr5.4:71543440-71543459 MS.gene038258:CDS 50.0%
! TTCCTTGCGTAGCACTGAAC+TGG + chr5.4:71543189-71543208 None:intergenic 50.0%
!!! GAGCAGGGGTTTTTTCGATG+AGG - chr5.4:71543463-71543482 MS.gene038258:CDS 50.0%
AAGCTTTGCGAACTCGAGGG+TGG + chr5.4:71542694-71542713 None:intergenic 55.0%
AGGAAAACCACCGAGGAAGG+AGG + chr5.4:71543434-71543453 None:intergenic 55.0%
AGTCTGCTGCAGCAACTGAG+TGG + chr5.4:71543117-71543136 None:intergenic 55.0%
ATCAGCAAAGAGCGGCCATG+TGG + chr5.4:71543777-71543796 None:intergenic 55.0%
CAGAGGAAAACCACCGAGGA+AGG + chr5.4:71543437-71543456 None:intergenic 55.0%
CGAGACCAAAACCAAGGGCA+CGG - chr5.4:71543370-71543389 MS.gene038258:CDS 55.0%
GAAACAAATCCTCCCGTGGC+TGG + chr5.4:71543701-71543720 None:intergenic 55.0%
GAAGCAGAGGAAAACCACCG+AGG + chr5.4:71543441-71543460 None:intergenic 55.0%
GGCTAGTATCTGCGTCTGTG+GGG + chr5.4:71543675-71543694 None:intergenic 55.0%
GTCAGAATCAACCGTGCCCT+TGG + chr5.4:71543384-71543403 None:intergenic 55.0%
GTTGCTGCAGCAGACTGAGT+TGG - chr5.4:71543121-71543140 MS.gene038258:CDS 55.0%
TGATCAACCTCCTTCCTCGG+TGG - chr5.4:71543424-71543443 MS.gene038258:CDS 55.0%
TTGGTGTGCTCGTTGCCACA+TGG - chr5.4:71543759-71543778 MS.gene038258:CDS 55.0%
TTTCCTCTGCTTCGGGAGCA+GGG - chr5.4:71543448-71543467 MS.gene038258:CDS 55.0%
! CGGTGGTTTTCCTCTGCTTC+GGG - chr5.4:71543441-71543460 MS.gene038258:CDS 55.0%
! GCAGCGAGGACTCCATTTTC+TGG + chr5.4:71542948-71542967 None:intergenic 55.0%
! GGGCTAGTATCTGCGTCTGT+GGG + chr5.4:71543676-71543695 None:intergenic 55.0%
! TTTTCCTCTGCTTCGGGAGC+AGG - chr5.4:71543447-71543466 MS.gene038258:CDS 55.0%
!! TGGGCTAGTATCTGCGTCTG+TGG + chr5.4:71543677-71543696 None:intergenic 55.0%
!!! CGTGCCCTTGGTTTTGGTCT+CGG + chr5.4:71543372-71543391 None:intergenic 55.0%
!!! GTGCCCTTGGTTTTGGTCTC+GGG + chr5.4:71543371-71543390 None:intergenic 55.0%
!!! TGCCCTTGGTTTTGGTCTCG+GGG + chr5.4:71543370-71543389 None:intergenic 55.0%
AAATCCTCCCGTGGCTGGGT+GGG + chr5.4:71543696-71543715 None:intergenic 60.0%
ATACTAGCCCACCCAGCCAC+GGG - chr5.4:71543686-71543705 MS.gene038258:CDS 60.0%
GATACTAGCCCACCCAGCCA+CGG - chr5.4:71543685-71543704 MS.gene038258:CDS 60.0%
GCCCAGTTCAGTGCTACGCA+AGG - chr5.4:71543184-71543203 MS.gene038258:CDS 60.0%
TTCCTCTGCTTCGGGAGCAG+GGG - chr5.4:71543449-71543468 MS.gene038258:CDS 60.0%
AACCCCTGCTCCCGAAGCAG+AGG + chr5.4:71543454-71543473 None:intergenic 65.0%
CAAATCCTCCCGTGGCTGGG+TGG + chr5.4:71543697-71543716 None:intergenic 65.0%
CTAGCCCACCCAGCCACGGG+AGG - chr5.4:71543689-71543708 MS.gene038258:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 71542636 71544072 71542636 ID=MS.gene038258
chr5.4 mRNA 71542636 71544072 71542636 ID=MS.gene038258.t1;Parent=MS.gene038258
chr5.4 exon 71542636 71544072 71542636 ID=MS.gene038258.t1.exon1;Parent=MS.gene038258.t1
chr5.4 CDS 71542636 71544072 71542636 ID=cds.MS.gene038258.t1;Parent=MS.gene038258.t1
Gene Sequence

>MS.gene038258

ATGAAAAAAGCAGAAGTGGTGATTATCCCTTCACCTGGTGTTGGTCATCTAGTTTCCACCCTCGAGTTCGCAAAGCTTCTAATCAACCGTGATAACCGTCTCAGAATAACTGTCTTGGTCATGAAATTTCCACACACAACTGAAACCGATGTCTACACTAAATCCCTTCCCATCGATGATTCTCTTAACGTCATCGATCTTCCAGAATGTTCTCTTCCCCCAAACTCCAATATAACTTCCGGCATGGTGGATCTCCTCAAAGCTCAGAAACCAAACGTCAAAAGAGCCGTCTCCAACCTCACTAAAGCACCAGAAAATGGAGTCCTCGCTGCATTCATTGTTGACATGTTCTGCACCACCATGATTGATGTTGCAAAAGAATTTTCTGTCCCTACGCTCGTCTTCTTCACTTCTGGTGTTGCTTTCCTTGGTTTGAATCTTCATATTCACAATATGTTTGAACGAGACAATGTTGATTCCACTCAGTTGCTGCAGCAGACTGAGTTGGCCATCCCAAGTTTCGCTAACTCGGTTCCTTTAAACACTTTGCCCAGTTCAGTGCTACGCAAGGAATGGGAATCCTTCTTCATGAGCTATGCAAAAGGCCTCAAGAATGCTGATGCCATTATTGTCAATTCATTTGAAGAGCTAGAATCCTATGCCGTTCACTCCTTTGTCTCTCATCCTGATCTAGCAGGTTTACCCATATATCCGGTAGGACCAATATTAAACCCCGAGACCAAAACCAAGGGCACGGTTGATTCTGACAATATTGTCAAGTGGCTTGATGATCAACCTCCTTCCTCGGTGGTTTTCCTCTGCTTCGGGAGCAGGGGTTTTTTCGATGAGGATCAGGTTAAGGAAATCGCACTTGCTGTAGAGAATACTGGGGTCCGATTTGTGTGGTCTCTACGTAAACCACCACCTAAGGACACAATGAATGCACCATCTGATTACACTCTTTCTGATTTGAGTTCGGTTTTACCAGAAGGATTCTTAGATAGGACAGCAGAGATTGGAAGGGTTATTGGATGGGCCCCACAGACGCAGATACTAGCCCACCCAGCCACGGGAGGATTTGTTTCTCATTGTGGCTGGAATTCCACACTGGAGAGCATATATTTTGGTGTGCTCGTTGCCACATGGCCGCTCTTTGCTGATCAACAAACAAATGCTTTTGAATTGGTATGTGAGCTGAAGATGGCTGTGGAGATCGCATTAGATTATAGGTTAGAGTTTAATGGTGAGTCTAACTATCTTTTAACTGCCGACAAGATTGAGAGAGGAATAAGGAGTGTGTTGGATAAGGATGGAGAAGTAAGGAAGAAAGTGAAAGAGATGAGTGAAACAAGTAAAAAGACTCTGCTAGAGGGAGGATCTTCTTACACTTATCTAGGTCGTTTGGTCGATTATATTATGAATCAGGTATCAGATTAA
Protein sequence

>MS.gene038258.t1

MKKAEVVIIPSPGVGHLVSTLEFAKLLINRDNRLRITVLVMKFPHTTETDVYTKSLPIDDSLNVIDLPECSLPPNSNITSGMVDLLKAQKPNVKRAVSNLTKAPENGVLAAFIVDMFCTTMIDVAKEFSVPTLVFFTSGVAFLGLNLHIHNMFERDNVDSTQLLQQTELAIPSFANSVPLNTLPSSVLRKEWESFFMSYAKGLKNADAIIVNSFEELESYAVHSFVSHPDLAGLPIYPVGPILNPETKTKGTVDSDNIVKWLDDQPPSSVVFLCFGSRGFFDEDQVKEIALAVENTGVRFVWSLRKPPPKDTMNAPSDYTLSDLSSVLPEGFLDRTAEIGRVIGWAPQTQILAHPATGGFVSHCGWNSTLESIYFGVLVATWPLFADQQTNAFELVCELKMAVEIALDYRLEFNGESNYLLTADKIERGIRSVLDKDGEVRKKVKEMSETSKKTLLEGGSSYTYLGRLVDYIMNQVSD