AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47726

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47726.t1 MTR_5g090700 93.568 482 28 2 1 479 1 482 0.0 921
MS.gene47726.t1 MTR_5g090670 79.461 482 92 5 1 477 1 480 0.0 781
MS.gene47726.t1 MTR_5g090580 78.125 480 100 4 1 477 1 478 0.0 752
MS.gene47726.t1 MTR_5g090620 76.715 481 106 5 1 477 1 479 0.0 748
MS.gene47726.t1 MTR_5g090630 76.151 478 104 3 1 477 1 469 0.0 739
MS.gene47726.t1 MTR_5g090660 75.365 479 115 2 1 478 1 477 0.0 736
MS.gene47726.t1 MTR_5g090610 73.486 479 112 3 1 478 1 465 0.0 716
MS.gene47726.t1 MTR_5g090600 73.125 480 107 4 1 479 1 459 0.0 711
MS.gene47726.t1 MTR_5g098930 66.460 483 144 7 1 477 1 471 0.0 644
MS.gene47726.t1 MTR_5g090690 63.017 411 88 7 67 467 18 374 7.06e-162 463
MS.gene47726.t1 MTR_5g090650 65.057 352 89 3 1 351 1 319 6.05e-157 448
MS.gene47726.t1 MTR_5g070040 42.181 486 242 16 2 474 8 467 1.61e-121 363
MS.gene47726.t1 MTR_2g046750 42.828 488 237 15 1 471 1 463 3.79e-121 362
MS.gene47726.t1 MTR_2g046820 43.737 487 231 13 1 471 1 460 6.15e-120 359
MS.gene47726.t1 MTR_2g040530 42.739 482 243 12 1 470 1 461 1.61e-119 358
MS.gene47726.t1 MTR_5g070090 40.702 484 245 12 2 473 8 461 1.04e-114 346
MS.gene47726.t1 MTR_3g009510 32.860 493 288 17 1 470 1 473 2.67e-76 247
MS.gene47726.t1 MTR_6g023665 33.612 479 286 13 2 469 10 467 4.49e-76 246
MS.gene47726.t1 MTR_6g488280 33.264 478 287 14 3 469 4 460 5.07e-75 243
MS.gene47726.t1 MTR_0428s0010 33.264 478 287 14 3 469 4 460 5.07e-75 243
MS.gene47726.t1 MTR_7g117170 34.917 484 267 18 6 469 16 471 1.46e-73 240
MS.gene47726.t1 MTR_8g027870 34.639 485 261 17 6 469 19 468 6.31e-69 228
MS.gene47726.t1 MTR_8g027885 35.084 476 271 18 6 469 19 468 1.06e-68 227
MS.gene47726.t1 MTR_8g465670 32.444 487 288 15 2 470 4 467 1.20e-67 224
MS.gene47726.t1 MTR_8g006730 30.000 480 304 11 2 469 3 462 5.95e-67 222
MS.gene47726.t1 MTR_8g006710 30.738 488 301 13 2 475 3 467 8.77e-67 222
MS.gene47726.t1 MTR_8g006220 32.317 492 291 16 2 470 3 475 5.10e-66 220
MS.gene47726.t1 MTR_8g006270 32.716 486 282 16 2 470 3 460 5.96e-64 214
MS.gene47726.t1 MTR_0184s0040 30.625 480 300 10 2 469 18 476 6.63e-64 215
MS.gene47726.t1 MTR_0078s0190 30.625 480 300 10 2 469 18 476 6.63e-64 215
MS.gene47726.t1 MTR_6g033675 29.424 486 301 13 3 471 2 462 3.42e-63 213
MS.gene47726.t1 MTR_5g019580 28.889 495 301 14 2 469 4 474 6.16e-61 207
MS.gene47726.t1 MTR_0184s0030 32.075 477 287 18 2 463 3 457 8.80e-61 206
MS.gene47726.t1 MTR_8g077590 31.276 486 283 19 4 469 8 462 2.20e-60 205
MS.gene47726.t1 MTR_8g074550 31.412 503 301 17 2 476 5 491 2.27e-60 206
MS.gene47726.t1 MTR_6g033615 31.884 483 275 16 3 469 2 446 4.38e-60 204
MS.gene47726.t1 MTR_0078s0010 29.569 487 309 16 2 475 3 468 1.29e-59 203
MS.gene47726.t1 MTR_0078s0060 30.515 485 294 17 2 469 3 461 5.24e-59 201
MS.gene47726.t1 MTR_6g005600 30.625 480 300 14 3 469 4 463 1.20e-58 201
MS.gene47726.t1 MTR_8g006260 31.106 479 287 16 3 462 4 458 1.38e-58 201
MS.gene47726.t1 MTR_7g047030 29.522 481 305 17 2 469 3 462 2.73e-58 199
MS.gene47726.t1 MTR_7g047270 29.522 481 305 17 2 469 3 462 2.73e-58 199
MS.gene47726.t1 MTR_8g008970 30.928 485 291 18 2 469 3 460 7.60e-58 204
MS.gene47726.t1 MTR_8g008970 30.690 290 164 8 198 479 534 794 1.41e-29 123
MS.gene47726.t1 MTR_6g033725 28.800 500 283 15 3 471 2 459 9.34e-58 198
MS.gene47726.t1 MTR_6g033625 30.041 486 294 15 3 469 2 460 2.48e-57 197
MS.gene47726.t1 MTR_8g009067 29.835 486 297 16 2 470 3 461 4.12e-57 196
MS.gene47726.t1 MTR_8g009055 30.353 481 301 16 2 469 3 462 5.92e-57 196
MS.gene47726.t1 MTR_8g009073 29.757 494 285 17 2 469 3 460 1.98e-56 194
MS.gene47726.t1 MTR_7g046490 31.622 487 286 19 2 470 3 460 2.87e-56 194
MS.gene47726.t1 MTR_8g012635 29.762 504 291 19 2 475 3 473 6.13e-56 193
MS.gene47726.t1 MTR_8g012745 29.939 491 286 18 2 466 3 461 2.68e-55 192
MS.gene47726.t1 MTR_8g009050 30.642 483 297 17 2 469 3 462 1.32e-54 190
MS.gene47726.t1 MTR_5g019580 28.687 495 274 15 2 469 56 498 2.28e-54 190
MS.gene47726.t1 MTR_6g033660 29.339 484 297 15 6 471 5 461 4.03e-54 189
MS.gene47726.t1 MTR_8g012650 31.649 376 210 12 111 463 110 461 1.77e-53 187
MS.gene47726.t1 MTR_1g019510 29.079 478 308 12 2 469 3 459 2.11e-53 186
MS.gene47726.t1 MTR_3g479520 29.825 513 283 17 2 476 12 485 4.01e-52 183
MS.gene47726.t1 MTR_8g008990 29.814 483 303 17 2 469 3 464 3.65e-51 181
MS.gene47726.t1 MTR_8g009063 28.866 485 303 19 2 469 10 469 3.82e-51 181
MS.gene47726.t1 MTR_7g102460 29.134 508 305 16 3 479 7 490 1.03e-50 180
MS.gene47726.t1 MTR_4g095008 28.721 477 283 15 15 470 21 461 2.54e-49 177
MS.gene47726.t1 MTR_8g009067 32.133 361 210 12 124 470 4 343 4.82e-49 172
MS.gene47726.t1 MTR_3g079480 28.150 508 298 14 2 476 18 491 1.10e-48 174
MS.gene47726.t1 MTR_7g117405 28.942 501 294 18 7 476 14 483 5.80e-48 172
MS.gene47726.t1 MTR_7g102450 29.000 500 293 19 7 479 13 477 1.36e-47 171
MS.gene47726.t1 MTR_7g080900 27.314 443 250 14 2 418 9 405 1.33e-46 168
MS.gene47726.t1 MTR_4g094920 28.099 484 285 15 15 474 36 480 1.78e-46 169
MS.gene47726.t1 MTR_8g066610 28.773 497 292 16 6 471 10 475 2.41e-46 168
MS.gene47726.t1 MTR_4g485630 27.586 493 299 17 6 471 10 471 4.79e-46 167
MS.gene47726.t1 MTR_0536s0020 28.427 496 296 20 2 471 15 477 8.01e-46 166
MS.gene47726.t1 MTR_8g064880 28.000 450 272 15 6 431 10 431 8.32e-46 166
MS.gene47726.t1 MTR_3g069710 28.457 499 278 16 2 475 9 453 9.12e-46 166
MS.gene47726.t1 MTR_7g102490 27.148 512 312 16 3 479 7 492 9.82e-46 167
MS.gene47726.t1 MTR_3g479490 28.205 507 299 19 2 476 3 476 1.07e-45 166
MS.gene47726.t1 MTR_6g038240 27.236 492 285 16 7 474 13 455 1.78e-45 165
MS.gene47726.t1 MTR_6g078320 27.495 491 319 14 4 475 10 482 1.92e-45 165
MS.gene47726.t1 MTR_4g118000 27.902 491 296 18 8 476 15 469 3.07e-45 165
MS.gene47726.t1 MTR_4g024020 27.689 502 313 14 3 474 7 488 3.30e-45 165
MS.gene47726.t1 MTR_8g012730 33.696 276 140 7 196 461 54 296 4.00e-45 160
MS.gene47726.t1 MTR_8g064870 26.113 494 309 17 5 473 11 473 7.38e-45 164
MS.gene47726.t1 MTR_3g069690 28.515 505 278 17 2 478 5 454 1.01e-44 163
MS.gene47726.t1 MTR_1g107360 24.900 502 301 11 5 476 9 464 1.79e-44 162
MS.gene47726.t1 MTR_4g031800 27.342 523 281 19 2 477 6 476 2.14e-44 162
MS.gene47726.t1 MTR_4g117890 26.800 500 303 20 2 473 10 474 5.08e-44 161
MS.gene47726.t1 MTR_5g464760 27.545 501 304 15 3 474 10 480 5.15e-44 161
MS.gene47726.t1 MTR_5g072810 26.556 482 303 13 4 473 11 453 5.41e-44 160
MS.gene47726.t1 MTR_6g014220 25.737 509 305 14 2 474 7 478 6.97e-44 161
MS.gene47726.t1 MTR_8g009073 31.714 350 204 12 134 469 3 331 1.94e-43 156
MS.gene47726.t1 MTR_3g479610 32.177 317 167 8 180 476 27 315 2.06e-43 155
MS.gene47726.t1 MTR_5g029800 28.257 499 296 18 5 473 11 477 2.21e-43 160
MS.gene47726.t1 MTR_0009s0240 26.899 487 301 16 3 470 5 455 3.12e-43 159
MS.gene47726.t1 MTR_8g012630 38.967 213 116 5 260 466 204 408 5.80e-43 157
MS.gene47726.t1 MTR_0891s0010 32.698 315 168 9 180 476 4 292 8.03e-43 154
MS.gene47726.t1 MTR_5g035580 26.423 492 290 14 6 475 14 455 8.11e-43 158
MS.gene47726.t1 MTR_3g008010 26.430 507 302 15 3 474 8 478 8.62e-43 158
MS.gene47726.t1 MTR_4g082820 27.310 487 316 16 6 479 8 469 1.51e-42 157
MS.gene47726.t1 MTR_6g014290 26.265 514 301 15 2 476 7 481 1.63e-42 157
MS.gene47726.t1 MTR_3g049970 25.755 497 311 17 5 476 9 472 2.36e-42 157
MS.gene47726.t1 MTR_7g102550 28.600 493 290 17 7 464 11 476 4.23e-42 156
MS.gene47726.t1 MTR_4g082810 29.323 399 261 10 4 393 6 392 6.04e-42 154
MS.gene47726.t1 MTR_1g107350 27.114 402 241 13 92 473 99 468 6.84e-42 155
MS.gene47726.t1 MTR_7g071040 27.565 497 309 15 3 471 15 488 7.91e-42 156
MS.gene47726.t1 MTR_6g035185 25.956 497 305 18 8 471 14 480 8.83e-42 155
MS.gene47726.t1 MTR_6g014250 25.097 514 302 14 2 474 7 478 1.17e-41 155
MS.gene47726.t1 MTR_7g070940 28.343 501 292 16 2 471 6 470 1.78e-41 154
MS.gene47726.t1 MTR_0036s0220 27.406 478 281 12 6 454 13 453 4.24e-41 153
MS.gene47726.t1 MTR_2g098430 28.802 434 256 17 2 407 3 411 5.44e-41 153
MS.gene47726.t1 MTR_1g062380 26.627 507 307 17 6 475 17 495 8.44e-41 153
MS.gene47726.t1 MTR_1g019520 36.444 225 132 3 258 479 2 218 1.47e-40 145
MS.gene47726.t1 MTR_4g117960 26.061 495 305 16 8 471 14 478 1.77e-40 152
MS.gene47726.t1 MTR_4g117980 27.711 498 294 19 8 471 14 479 2.65e-40 151
MS.gene47726.t1 MTR_3g479470 29.306 447 250 20 2 411 10 427 2.79e-40 151
MS.gene47726.t1 MTR_4g008630 35.417 240 139 7 239 473 234 462 3.46e-40 150
MS.gene47726.t1 MTR_7g070740 28.032 503 298 19 3 471 9 481 3.55e-40 151
MS.gene47726.t1 MTR_5g045970 26.265 514 299 18 6 475 17 494 4.06e-40 151
MS.gene47726.t1 MTR_5g072820 25.813 492 291 14 4 473 9 448 4.31e-40 150
MS.gene47726.t1 MTR_4g094220 26.112 517 287 17 3 470 5 475 5.36e-40 150
MS.gene47726.t1 MTR_7g102560 26.408 515 301 19 7 479 11 489 6.41e-40 150
MS.gene47726.t1 MTR_1g029540 26.160 474 307 15 10 473 19 459 1.19e-39 149
MS.gene47726.t1 MTR_5g045960 26.488 521 303 19 2 478 6 490 1.28e-39 149
MS.gene47726.t1 MTR_1g107315 28.993 407 237 15 92 478 99 473 1.32e-39 149
MS.gene47726.t1 MTR_4g117950 28.858 499 285 20 2 471 3 460 1.69e-39 149
MS.gene47726.t1 MTR_1g032490 26.113 494 305 18 6 473 11 470 1.70e-39 149
MS.gene47726.t1 MTR_7g070810 27.237 503 298 18 2 471 6 473 3.58e-39 148
MS.gene47726.t1 MTR_0536s0010 26.148 501 310 18 2 479 18 481 4.09e-39 148
MS.gene47726.t1 MTR_7g070780 27.778 504 292 17 6 471 12 481 5.75e-39 148
MS.gene47726.t1 MTR_4g485620 29.365 378 224 11 113 471 99 452 9.33e-39 147
MS.gene47726.t1 MTR_7g012120 27.699 491 306 16 5 471 16 481 1.06e-38 147
MS.gene47726.t1 MTR_7g070860 24.603 504 299 13 2 471 4 460 1.19e-38 147
MS.gene47726.t1 MTR_1g107285 26.265 415 237 14 90 478 97 468 1.34e-38 146
MS.gene47726.t1 MTR_5g035560 25.610 492 294 13 6 475 12 453 1.85e-38 146
MS.gene47726.t1 MTR_6g014050 27.654 405 237 11 97 474 106 481 2.29e-38 146
MS.gene47726.t1 MTR_8g044140 30.933 375 225 12 115 471 88 446 2.41e-38 145
MS.gene47726.t1 MTR_7g055710 26.104 498 308 18 6 471 12 481 2.58e-38 146
MS.gene47726.t1 MTR_8g071070 26.172 512 289 15 3 473 5 468 4.61e-38 145
MS.gene47726.t1 MTR_1g107365 26.786 504 277 20 5 473 45 491 4.69e-38 145
MS.gene47726.t1 MTR_1g107380 27.132 387 223 12 111 474 123 473 5.08e-38 145
MS.gene47726.t1 MTR_5g072830 24.330 485 307 12 4 473 9 448 7.99e-38 144
MS.gene47726.t1 MTR_0288s0020 24.850 499 305 14 2 474 7 461 8.20e-38 144
MS.gene47726.t1 MTR_5g031840 25.984 508 294 19 1 473 1 461 1.06e-37 144
MS.gene47726.t1 MTR_5g031830 27.092 502 288 18 6 473 13 470 1.25e-37 144
MS.gene47726.t1 MTR_6g014020 24.414 512 310 15 2 474 7 480 1.46e-37 144
MS.gene47726.t1 MTR_6g038300 25.874 429 254 12 6 411 12 399 1.48e-37 143
MS.gene47726.t1 MTR_5g072840 24.641 487 307 12 4 475 9 450 1.59e-37 143
MS.gene47726.t1 MTR_4g485590 29.792 433 231 16 4 414 8 389 1.74e-37 142
MS.gene47726.t1 MTR_6g013440 25.832 511 304 15 2 474 8 481 1.74e-37 143
MS.gene47726.t1 MTR_5g464810 26.773 437 259 10 4 406 11 420 1.76e-37 143
MS.gene47726.t1 MTR_5g064240 26.773 437 259 10 4 406 11 420 1.76e-37 143
MS.gene47726.t1 MTR_8g059425 26.358 497 292 15 2 461 7 466 1.82e-37 143
MS.gene47726.t1 MTR_6g035265 25.767 489 307 16 8 471 14 471 2.45e-37 143
MS.gene47726.t1 MTR_5g075440 27.056 377 229 8 115 475 111 457 2.72e-37 142
MS.gene47726.t1 MTR_2g035020 26.220 492 315 16 5 471 11 479 2.94e-37 143
MS.gene47726.t1 MTR_8g083290 26.839 503 291 18 6 474 5 464 3.18e-37 142
MS.gene47726.t1 MTR_6g038200 25.514 486 283 17 4 462 10 443 3.54e-37 142
MS.gene47726.t1 MTR_1g107375 25.000 492 300 15 5 473 8 453 4.37e-37 142
MS.gene47726.t1 MTR_7g070800 25.257 487 323 13 6 471 7 473 5.53e-37 142
MS.gene47726.t1 MTR_5g016660 26.008 496 316 14 3 470 8 480 5.75e-37 142
MS.gene47726.t1 MTR_7g080950 25.773 485 287 15 3 465 4 437 5.84e-37 141
MS.gene47726.t1 MTR_6g014310 28.424 387 226 12 111 474 123 481 6.08e-37 142
MS.gene47726.t1 MTR_5g039900 26.575 508 291 17 5 470 13 480 6.38e-37 142
MS.gene47726.t1 MTR_1g040310 29.412 374 229 10 115 471 126 481 9.34e-37 142
MS.gene47726.t1 MTR_7g070610 28.131 487 313 17 6 471 14 484 1.18e-36 141
MS.gene47726.t1 MTR_7g080940 23.307 502 304 17 3 477 9 456 1.27e-36 140
MS.gene47726.t1 MTR_7g102520 27.470 506 301 17 7 475 14 490 1.28e-36 141
MS.gene47726.t1 MTR_4g485640 29.178 377 227 9 113 470 308 663 1.29e-36 143
MS.gene47726.t1 MTR_5g087620 25.341 513 308 16 2 471 7 487 1.57e-36 141
MS.gene47726.t1 MTR_2g034990 27.237 503 296 23 5 471 11 479 1.87e-36 140
MS.gene47726.t1 MTR_7g070660 26.600 500 299 19 6 471 12 477 2.10e-36 140
MS.gene47726.t1 MTR_7g070930 26.721 494 311 16 6 471 15 485 2.32e-36 140
MS.gene47726.t1 MTR_7g070910 27.183 504 302 18 3 471 9 482 3.59e-36 140
MS.gene47726.t1 MTR_6g038220 25.926 486 274 18 7 462 13 442 4.37e-36 139
MS.gene47726.t1 MTR_5g016480 34.043 282 146 10 211 479 218 472 4.48e-36 139
MS.gene47726.t1 MTR_2g059240 29.101 378 219 10 115 474 123 469 4.86e-36 139
MS.gene47726.t1 MTR_6g038230 24.742 485 288 15 4 462 10 443 5.36e-36 139
MS.gene47726.t1 MTR_6g014040 25.145 517 301 15 2 474 7 481 7.14e-36 139
MS.gene47726.t1 MTR_2g008210 25.686 510 302 18 2 474 8 477 8.66e-36 139
MS.gene47726.t1 MTR_2g035040 27.062 388 241 15 109 471 14 384 1.01e-35 137
MS.gene47726.t1 MTR_6g014170 24.600 500 306 14 2 474 7 462 1.28e-35 138
MS.gene47726.t1 MTR_5g040030 25.249 503 313 15 2 470 11 484 1.37e-35 138
MS.gene47726.t1 MTR_5g031860 27.490 502 287 19 5 473 12 469 1.53e-35 138
MS.gene47726.t1 MTR_4g128690 25.432 405 251 11 80 473 88 452 1.72e-35 137
MS.gene47726.t1 MTR_7g013200 22.199 473 320 15 9 474 9 440 2.18e-35 137
MS.gene47726.t1 MTR_5g067170 26.069 491 309 16 8 471 14 477 2.58e-35 137
MS.gene47726.t1 MTR_8g083280 32.222 270 149 7 211 474 221 462 2.61e-35 137
MS.gene47726.t1 MTR_4g064987 26.543 486 298 18 3 475 6 445 3.00e-35 137
MS.gene47726.t1 MTR_6g014150 27.404 416 250 12 86 474 87 477 3.27e-35 137
MS.gene47726.t1 MTR_8g466240 27.291 491 288 19 3 470 6 450 8.49e-35 135
MS.gene47726.t1 MTR_6g035295 25.247 507 303 16 5 471 12 482 1.61e-34 135
MS.gene47726.t1 MTR_7g013220 24.059 478 312 17 9 472 9 449 1.70e-34 134
MS.gene47726.t1 MTR_6g014300 29.288 379 217 13 111 474 124 466 2.20e-34 134
MS.gene47726.t1 MTR_4g108250 26.824 507 297 16 6 471 12 485 2.24e-34 135
MS.gene47726.t1 MTR_3g084540 27.614 373 225 14 126 473 121 473 2.84e-34 134
MS.gene47726.t1 MTR_6g014187 24.951 513 306 17 2 474 7 480 3.32e-34 134
MS.gene47726.t1 MTR_4g064987 25.926 486 307 17 3 475 6 451 3.77e-34 134
MS.gene47726.t1 MTR_7g080935 23.340 497 306 17 3 475 9 454 4.74e-34 134
MS.gene47726.t1 MTR_7g070870 32.581 310 165 9 172 471 181 456 5.27e-34 133
MS.gene47726.t1 MTR_6g014270 24.206 504 321 13 3 474 5 479 8.56e-34 133
MS.gene47726.t1 MTR_3g084530 27.151 372 227 13 126 473 121 472 9.28e-34 133
MS.gene47726.t1 MTR_5g072860 23.482 494 309 13 6 475 19 467 1.22e-33 132
MS.gene47726.t1 MTR_7g013240 24.059 478 300 16 9 472 10 438 1.36e-33 132
MS.gene47726.t1 MTR_7g013180 22.689 476 315 16 9 472 9 443 5.36e-33 130
MS.gene47726.t1 MTR_3g031450 24.481 482 287 13 4 464 17 442 5.51e-33 130
MS.gene47726.t1 MTR_8g043470 27.882 373 204 10 111 470 54 374 5.83e-33 129
MS.gene47726.t1 MTR_6g013450 23.977 513 310 14 3 474 8 481 6.34e-33 130
MS.gene47726.t1 MTR_5g027210 25.888 394 210 10 115 453 97 463 7.35e-33 130
MS.gene47726.t1 MTR_7g039550 34.862 218 129 3 256 470 51 258 1.02e-32 125
MS.gene47726.t1 MTR_6g014200 25.964 389 233 11 111 474 119 477 1.03e-32 130
MS.gene47726.t1 MTR_8g090095 31.597 288 172 12 198 473 205 479 1.23e-32 130
MS.gene47726.t1 MTR_6g011340 25.193 389 236 10 111 474 122 480 2.16e-32 129
MS.gene47726.t1 MTR_5g058320 24.950 501 304 17 3 474 8 465 2.91e-32 129
MS.gene47726.t1 MTR_6g013920 28.165 387 227 14 111 474 121 479 4.94e-32 128
MS.gene47726.t1 MTR_6g013900 26.923 416 241 13 94 476 97 482 4.97e-32 128
MS.gene47726.t1 MTR_7g011470 24.603 504 305 14 2 474 7 466 1.01e-31 127
MS.gene47726.t1 MTR_6g013960 24.165 509 315 15 2 474 7 480 1.09e-31 127
MS.gene47726.t1 MTR_3g009490 34.555 191 111 5 286 470 3 185 1.15e-31 120
MS.gene47726.t1 MTR_8g088560 25.105 474 300 13 5 463 10 443 1.67e-31 126
MS.gene47726.t1 MTR_3g084520 24.242 396 256 12 102 473 97 472 3.20e-31 125
MS.gene47726.t1 MTR_3g031400 23.108 489 309 13 1 474 14 450 5.68e-31 125
MS.gene47726.t1 MTR_7g013260 23.640 478 303 16 9 472 10 439 8.16e-31 124
MS.gene47726.t1 MTR_7g011470 24.800 500 305 14 2 474 7 462 9.37e-31 124
MS.gene47726.t1 MTR_6g013990 25.065 387 237 11 111 474 122 478 1.35e-30 124
MS.gene47726.t1 MTR_7g470610 36.406 217 115 5 202 407 66 270 1.42e-30 120
MS.gene47726.t1 MTR_7g070583 36.406 217 115 5 202 407 66 270 1.42e-30 120
MS.gene47726.t1 MTR_8g032950 28.889 315 194 9 174 471 177 478 1.51e-30 124
MS.gene47726.t1 MTR_0477s0010 27.548 363 201 10 124 474 5 317 1.76e-30 120
MS.gene47726.t1 MTR_6g014240 24.748 497 289 15 2 470 4 443 5.02e-30 122
MS.gene47726.t1 MTR_5g098960 25.641 468 285 18 1 451 3 424 1.26e-29 121
MS.gene47726.t1 MTR_5g004940 30.769 260 132 7 222 476 164 380 1.86e-29 119
MS.gene47726.t1 MTR_8g007585 31.364 220 129 4 255 474 195 392 6.60e-28 115
MS.gene47726.t1 MTR_8g009840 32.273 220 134 4 257 469 310 521 7.03e-28 117
MS.gene47726.t1 MTR_4g128720 24.155 414 266 12 69 473 81 455 9.74e-28 115
MS.gene47726.t1 MTR_6g014190 25.879 313 181 8 182 474 6 287 2.23e-27 111
MS.gene47726.t1 MTR_7g071050 25.786 477 260 22 6 456 14 422 3.10e-27 114
MS.gene47726.t1 MTR_2g014900 25.979 485 298 15 5 470 7 449 1.43e-26 112
MS.gene47726.t1 MTR_2086s0010 32.487 197 108 3 284 478 3 176 4.24e-26 104
MS.gene47726.t1 MTR_1996s0010 32.487 197 108 3 284 478 3 176 4.24e-26 104
MS.gene47726.t1 MTR_0078s0200 28.438 320 203 11 2 309 3 308 1.17e-25 107
MS.gene47726.t1 MTR_8g068340 24.950 501 302 20 2 473 9 464 4.55e-25 108
MS.gene47726.t1 MTR_5g072850 29.907 214 107 6 189 393 143 322 1.31e-24 105
MS.gene47726.t1 MTR_8g007565 26.427 473 276 17 5 446 7 438 3.06e-24 105
MS.gene47726.t1 MTR_8g068330 25.296 506 302 23 2 477 5 464 3.14e-24 105
MS.gene47726.t1 MTR_8g007650 26.427 473 276 17 5 446 7 438 6.77e-24 104
MS.gene47726.t1 MTR_5g066410 26.279 430 236 13 42 446 41 414 1.26e-23 103
MS.gene47726.t1 MTR_7g070760 33.175 211 96 4 206 407 28 202 2.01e-23 98.2
MS.gene47726.t1 MTR_8g056740 29.967 307 153 13 113 412 55 306 3.49e-23 101
MS.gene47726.t1 MTR_7g067120 24.409 508 260 23 2 473 6 425 1.90e-22 99.8
MS.gene47726.t1 MTR_6g013680 28.819 288 139 11 111 375 69 313 2.93e-22 98.6
MS.gene47726.t1 MTR_4g079250 27.372 274 170 6 197 466 199 447 5.50e-22 99.0
MS.gene47726.t1 MTR_4g079270 26.642 274 172 5 197 466 199 447 6.14e-22 98.6
MS.gene47726.t1 MTR_8g068360 29.183 257 154 10 200 450 210 444 1.33e-21 97.8
MS.gene47726.t1 MTR_6g014185 26.690 281 139 7 205 474 121 345 1.51e-21 96.3
MS.gene47726.t1 MTR_8g006230 25.311 241 170 5 77 312 18 253 2.13e-21 94.4
MS.gene47726.t1 MTR_2g008226 29.577 284 152 12 208 478 223 471 2.73e-21 96.7
MS.gene47726.t1 MTR_4g059370 26.647 334 189 11 160 470 85 385 9.41e-21 94.4
MS.gene47726.t1 MTR_7g080960 31.646 158 63 1 254 411 319 431 1.09e-20 95.1
MS.gene47726.t1 MTR_7g070995 39.231 130 75 2 346 471 13 142 1.32e-20 89.0
MS.gene47726.t1 MTR_2g046620 29.771 262 148 9 199 450 204 439 2.76e-20 93.6
MS.gene47726.t1 MTR_6g014160 26.490 302 151 12 111 389 104 357 7.33e-20 91.7
MS.gene47726.t1 MTR_1g090270 28.632 234 150 5 238 470 241 458 8.56e-20 92.0
MS.gene47726.t1 MTR_7g067330 24.346 497 284 19 2 478 6 430 3.04e-19 90.1
MS.gene47726.t1 MTR_2g083480 28.947 266 158 9 204 464 206 445 3.61e-19 90.1
MS.gene47726.t1 MTR_5g090680 95.238 42 2 0 1 42 1 42 3.66e-19 83.2
MS.gene47726.t1 MTR_4g123553 30.435 253 140 10 208 450 212 438 5.51e-19 89.7
MS.gene47726.t1 MTR_0536s0030 35.484 155 89 7 326 471 197 349 6.58e-19 88.6
MS.gene47726.t1 MTR_5g066390 28.497 193 111 4 285 474 47 215 2.42e-18 84.3
MS.gene47726.t1 MTR_6g014000 34.868 152 83 6 325 475 21 157 3.27e-18 87.4
MS.gene47726.t1 MTR_2g008220 31.839 223 119 8 238 450 243 442 7.21e-18 86.3
MS.gene47726.t1 MTR_2g083430 29.344 259 152 8 204 457 206 438 1.33e-17 85.5
MS.gene47726.t1 MTR_6g036650 36.913 149 78 4 259 406 276 409 1.48e-17 85.5
MS.gene47726.t1 MTR_2g008225 31.795 195 108 6 259 450 271 443 1.69e-17 85.1
MS.gene47726.t1 MTR_3g009500 27.820 266 173 10 1 253 1 260 4.43e-17 81.6
MS.gene47726.t1 MTR_1g107325 27.586 174 116 3 305 476 190 355 5.16e-17 82.8
MS.gene47726.t1 MTR_4g077960 30.964 197 107 7 259 450 243 415 3.60e-16 80.9
MS.gene47726.t1 MTR_6g042310 24.330 485 275 21 1 450 14 441 4.39e-16 80.9
MS.gene47726.t1 MTR_3g009520 23.881 268 177 9 2 252 3 260 2.16e-15 76.6
MS.gene47726.t1 MTR_3g435310 30.769 195 110 6 259 450 225 397 2.53e-15 78.2
MS.gene47726.t1 MTR_6g014186 22.505 511 283 18 2 474 4 439 3.50e-15 77.8
MS.gene47726.t1 MTR_6g052375 30.890 191 96 7 173 351 28 194 1.14e-13 72.4
MS.gene47726.t1 MTR_2g083380 27.341 267 161 8 197 457 216 455 2.81e-12 68.9
MS.gene47726.t1 MTR_0475s0030 48.214 56 29 0 356 411 11 66 1.52e-11 61.2
MS.gene47726.t1 MTR_1g090280 25.131 191 128 3 284 473 135 311 2.09e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47726.t1 AT3G21760 43.967 489 256 7 3 478 2 485 8.19e-135 398
MS.gene47726.t1 AT3G21750 41.909 482 262 7 3 477 2 472 7.91e-129 382
MS.gene47726.t1 AT3G21780 42.857 483 258 9 3 478 2 473 4.37e-128 380
MS.gene47726.t1 AT4G15280 43.333 480 260 9 3 475 2 476 3.30e-126 376
MS.gene47726.t1 AT4G15280 43.333 480 260 9 3 475 34 508 5.02e-126 376
MS.gene47726.t1 AT3G21790 41.770 486 267 7 3 477 2 482 7.73e-126 375
MS.gene47726.t1 AT3G21800 40.695 489 270 9 1 478 1 480 2.50e-117 353
MS.gene47726.t1 AT2G29730 41.116 484 246 12 1 470 1 459 1.06e-116 351
MS.gene47726.t1 AT1G07250 40.741 486 254 13 1 470 2 469 5.18e-116 350
MS.gene47726.t1 AT2G29740 41.152 486 252 13 2 471 5 472 8.12e-114 344
MS.gene47726.t1 AT1G07240 38.384 495 267 10 1 475 1 477 4.74e-110 334
MS.gene47726.t1 AT2G29710 40.123 486 248 12 1 470 1 459 1.40e-108 330
MS.gene47726.t1 AT4G15260 44.959 367 188 7 118 478 1 359 9.19e-107 322
MS.gene47726.t1 AT1G07260 39.511 491 258 14 3 475 4 473 3.55e-106 324
MS.gene47726.t1 AT2G29750 38.900 491 269 15 2 478 5 478 8.76e-101 311
MS.gene47726.t1 AT3G16520 32.165 485 287 13 1 471 1 457 3.99e-76 246
MS.gene47726.t1 AT3G16520 31.656 477 284 13 1 463 1 449 4.93e-73 238
MS.gene47726.t1 AT3G16520 32.128 470 275 13 1 456 1 440 5.01e-73 238
MS.gene47726.t1 AT4G01070 32.489 474 293 12 2 466 5 460 5.89e-68 225
MS.gene47726.t1 AT5G66690 32.218 478 279 20 1 460 3 453 1.56e-64 216
MS.gene47726.t1 AT4G36770 33.051 472 261 17 8 456 7 446 5.97e-64 214
MS.gene47726.t1 AT5G26310 31.405 484 281 17 1 463 3 456 2.99e-63 213
MS.gene47726.t1 AT1G01420 33.194 479 280 16 6 469 12 465 1.41e-62 211
MS.gene47726.t1 AT1G01420 33.194 479 280 16 6 469 9 462 1.52e-62 211
MS.gene47726.t1 AT1G01390 35.577 416 237 17 5 406 8 406 9.82e-61 206
MS.gene47726.t1 AT1G01390 35.577 416 237 17 5 406 25 423 1.09e-60 206
MS.gene47726.t1 AT2G18570 29.278 485 298 16 1 466 1 459 8.33e-60 204
MS.gene47726.t1 AT3G50740 29.637 496 297 19 1 471 3 471 9.74e-57 196
MS.gene47726.t1 AT2G15480 29.167 504 291 18 2 471 7 478 1.40e-52 185
MS.gene47726.t1 AT2G15480 28.599 514 291 18 2 471 7 488 9.64e-52 182
MS.gene47726.t1 AT1G22380 27.756 508 296 16 2 474 10 481 1.42e-48 174
MS.gene47726.t1 AT5G12890 29.644 506 293 22 2 474 7 482 2.05e-48 174
MS.gene47726.t1 AT2G15490 29.423 503 283 17 6 471 8 475 6.54e-48 172
MS.gene47726.t1 AT2G18560 29.517 393 239 13 88 466 1 369 1.06e-47 169
MS.gene47726.t1 AT1G78270 29.218 486 262 20 2 448 10 452 1.22e-47 171
MS.gene47726.t1 AT2G15490 29.225 503 287 17 6 471 8 478 2.09e-47 171
MS.gene47726.t1 AT3G46670 28.986 483 284 17 6 473 10 448 5.56e-47 169
MS.gene47726.t1 AT4G34135 29.221 462 271 14 2 435 8 441 3.20e-45 165
MS.gene47726.t1 AT4G34131 28.902 519 272 18 2 471 7 477 3.60e-45 164
MS.gene47726.t1 AT2G36760 27.255 499 313 16 7 477 16 492 8.67e-45 164
MS.gene47726.t1 AT2G36770 27.129 505 306 19 7 477 16 492 1.07e-44 164
MS.gene47726.t1 AT1G22400 28.810 479 268 16 2 446 10 449 1.34e-44 163
MS.gene47726.t1 AT1G22370 30.505 436 250 15 2 409 10 420 1.61e-44 163
MS.gene47726.t1 AT5G59590 26.971 482 301 15 1 471 6 447 3.37e-44 161
MS.gene47726.t1 AT5G59580 28.482 481 290 17 3 471 7 445 3.42e-44 161
MS.gene47726.t1 AT1G22340 26.796 515 291 14 2 473 10 481 4.17e-44 162
MS.gene47726.t1 AT3G46660 27.893 484 296 17 3 473 12 455 5.99e-44 160
MS.gene47726.t1 AT1G22360 27.088 491 273 14 2 454 7 450 1.21e-43 160
MS.gene47726.t1 AT2G36750 27.888 502 301 18 7 475 12 485 3.05e-43 159
MS.gene47726.t1 AT3G46700 28.337 487 294 19 1 476 5 447 3.60e-43 158
MS.gene47726.t1 AT4G34138 26.923 494 310 15 3 471 9 476 1.51e-42 157
MS.gene47726.t1 AT1G22360 27.803 446 254 12 2 409 7 422 1.53e-42 157
MS.gene47726.t1 AT3G53160 28.175 504 300 19 7 476 10 485 2.50e-42 157
MS.gene47726.t1 AT2G36780 26.600 500 311 17 7 475 16 490 5.36e-42 156
MS.gene47726.t1 AT2G36800 25.896 502 311 15 7 474 14 488 1.69e-41 155
MS.gene47726.t1 AT3G46650 27.329 483 285 16 3 475 8 434 2.10e-41 153
MS.gene47726.t1 AT5G38010 28.601 486 294 17 2 473 7 453 1.86e-40 151
MS.gene47726.t1 AT2G36790 26.747 501 309 14 7 475 15 489 8.88e-40 150
MS.gene47726.t1 AT2G31790 26.721 494 292 15 2 470 5 453 9.29e-40 149
MS.gene47726.t1 AT4G15270 37.037 216 118 5 3 207 2 210 2.27e-39 142
MS.gene47726.t1 AT4G15500 26.551 403 238 11 96 475 97 464 2.31e-39 149
MS.gene47726.t1 AT3G55700 31.579 304 174 9 179 475 176 452 2.53e-39 148
MS.gene47726.t1 AT4G15270 35.808 229 129 5 3 220 2 223 3.44e-39 144
MS.gene47726.t1 AT5G14860 28.460 513 274 22 7 473 10 475 4.28e-39 148
MS.gene47726.t1 AT4G15490 24.510 510 305 17 2 476 5 469 6.11e-39 147
MS.gene47726.t1 AT3G46690 27.273 484 302 18 1 473 5 449 1.81e-38 145
MS.gene47726.t1 AT1G05680 24.297 498 293 14 4 470 5 449 2.67e-38 145
MS.gene47726.t1 AT3G55710 25.820 488 312 16 2 475 5 456 1.01e-37 144
MS.gene47726.t1 AT5G38040 27.742 465 289 15 15 470 20 446 1.63e-37 143
MS.gene47726.t1 AT3G53150 26.880 532 298 21 2 478 19 514 1.92e-37 144
MS.gene47726.t1 AT1G51210 26.981 467 268 16 3 448 18 432 1.98e-37 142
MS.gene47726.t1 AT4G15270 37.624 202 108 5 3 193 2 196 3.87e-37 136
MS.gene47726.t1 AT1G22370 35.294 255 129 8 173 409 14 250 5.02e-37 138
MS.gene47726.t1 AT3G11340 25.780 481 308 13 3 475 7 446 6.32e-37 141
MS.gene47726.t1 AT3G21560 24.752 505 294 17 6 471 13 470 7.11e-37 142
MS.gene47726.t1 AT1G05675 23.752 501 292 15 4 470 5 449 9.09e-37 141
MS.gene47726.t1 AT2G43820 26.008 496 296 17 2 476 4 449 1.51e-36 140
MS.gene47726.t1 AT2G23250 32.787 305 165 10 182 473 158 435 1.55e-36 140
MS.gene47726.t1 AT5G05870 32.990 291 158 9 192 473 192 454 2.40e-36 140
MS.gene47726.t1 AT3G46680 26.176 489 299 18 2 473 6 449 3.92e-36 139
MS.gene47726.t1 AT4G15550 25.152 493 311 15 7 474 15 474 5.12e-36 139
MS.gene47726.t1 AT2G30140 24.696 494 294 15 6 475 14 453 1.14e-35 138
MS.gene47726.t1 AT2G16890 27.613 507 283 20 6 477 10 467 1.44e-35 138
MS.gene47726.t1 AT2G30150 26.349 482 306 14 6 477 14 456 2.38e-35 137
MS.gene47726.t1 AT2G30140 24.696 494 293 15 6 475 14 452 4.31e-35 136
MS.gene47726.t1 AT5G17050 27.317 410 248 12 79 475 86 458 6.08e-35 136
MS.gene47726.t1 AT2G23260 32.907 313 163 11 180 473 169 453 7.42e-35 135
MS.gene47726.t1 AT2G30150 25.887 479 306 13 9 477 1 440 8.98e-35 135
MS.gene47726.t1 AT4G01070 29.825 342 224 8 2 337 5 336 1.68e-34 132
MS.gene47726.t1 AT2G36970 28.777 278 166 8 205 477 224 474 1.97e-34 135
MS.gene47726.t1 AT1G05560 25.153 489 306 17 7 476 7 454 2.66e-34 134
MS.gene47726.t1 AT2G31750 25.000 496 302 15 3 474 6 455 2.73e-34 134
MS.gene47726.t1 AT1G05560 25.153 489 306 17 7 476 57 504 2.93e-34 135
MS.gene47726.t1 AT2G31750 24.850 499 305 15 3 477 6 458 3.84e-34 134
MS.gene47726.t1 AT1G73880 25.896 502 298 17 3 475 12 468 6.09e-34 133
MS.gene47726.t1 AT2G28080 26.238 404 256 11 85 477 103 475 4.83e-33 131
MS.gene47726.t1 AT4G15480 25.061 407 236 13 97 473 111 478 5.01e-33 131
MS.gene47726.t1 AT5G03490 26.518 494 288 18 2 470 16 459 1.80e-32 129
MS.gene47726.t1 AT2G16890 28.438 429 249 16 6 409 10 405 1.94e-32 128
MS.gene47726.t1 AT3G46720 27.329 483 292 18 2 473 6 440 4.83e-32 127
MS.gene47726.t1 AT3G02100 23.857 503 311 15 1 478 9 464 1.11e-31 127
MS.gene47726.t1 AT2G43840 27.949 390 206 13 111 473 105 446 1.28e-31 126
MS.gene47726.t1 AT2G43840 27.692 390 207 13 111 473 105 446 1.95e-31 126
MS.gene47726.t1 AT1G24100 24.756 513 281 17 3 473 9 458 4.29e-31 125
MS.gene47726.t1 AT5G05880 24.949 493 292 18 6 473 9 448 5.55e-30 122
MS.gene47726.t1 AT5G54010 25.859 495 300 17 3 479 4 449 2.52e-29 120
MS.gene47726.t1 AT1G10400 25.875 514 290 21 1 475 3 464 2.77e-29 120
MS.gene47726.t1 AT4G14090 28.729 362 205 15 126 471 129 453 3.41e-29 120
MS.gene47726.t1 AT5G17030 26.585 410 252 12 80 475 83 457 4.62e-29 119
MS.gene47726.t1 AT3G22250 25.316 474 284 17 2 446 5 437 8.65e-29 119
MS.gene47726.t1 AT1G05530 24.280 486 301 16 1 462 1 443 1.02e-28 118
MS.gene47726.t1 AT3G29630 24.742 485 311 13 3 477 4 444 2.26e-28 117
MS.gene47726.t1 AT1G06000 30.363 303 181 9 180 470 146 430 4.86e-28 116
MS.gene47726.t1 AT5G37950 31.769 277 167 12 110 380 82 342 7.62e-28 114
MS.gene47726.t1 AT1G30530 24.270 445 293 12 40 475 43 452 1.11e-27 115
MS.gene47726.t1 AT2G26480 25.549 501 298 21 1 479 4 451 3.87e-27 114
MS.gene47726.t1 AT5G05860 28.472 288 176 7 192 474 186 448 4.25e-27 114
MS.gene47726.t1 AT5G37950 31.159 276 164 12 110 380 82 336 1.39e-26 110
MS.gene47726.t1 AT4G27560 29.137 278 173 4 202 478 194 448 3.26e-26 111
MS.gene47726.t1 AT1G64910 32.099 243 144 5 238 479 221 443 3.35e-26 111
MS.gene47726.t1 AT5G49690 32.576 264 130 11 199 450 205 432 3.86e-26 111
MS.gene47726.t1 AT5G17040 25.495 455 272 15 40 475 35 441 4.31e-26 110
MS.gene47726.t1 AT5G53990 28.322 286 181 6 195 479 181 443 1.36e-25 109
MS.gene47726.t1 AT4G27570 28.058 278 176 4 202 478 194 448 1.86e-25 108
MS.gene47726.t1 AT5G05890 28.772 285 173 9 194 473 193 452 2.33e-25 108
MS.gene47726.t1 AT5G65550 23.587 513 300 18 3 478 7 464 3.99e-25 108
MS.gene47726.t1 AT5G05900 24.109 477 315 16 6 473 9 447 7.04e-25 107
MS.gene47726.t1 AT1G64920 28.966 290 178 7 195 479 181 447 1.58e-24 106
MS.gene47726.t1 AT3G29630 30.303 231 142 3 248 477 206 418 3.76e-24 104
MS.gene47726.t1 AT5G17040 26.786 336 205 9 150 475 35 339 6.87e-24 102
MS.gene47726.t1 AT1G50580 25.615 488 305 17 3 479 4 444 1.55e-23 103
MS.gene47726.t1 AT2G22930 27.698 278 177 6 195 471 181 435 4.78e-23 101
MS.gene47726.t1 AT5G54060 28.571 329 193 13 156 469 157 458 4.88e-23 102
MS.gene47726.t1 AT4G09500 26.619 278 180 7 195 471 181 435 3.97e-20 93.2
MS.gene47726.t1 AT2G22590 24.558 509 295 23 3 475 13 468 4.01e-20 93.2
MS.gene47726.t1 AT4G34135 25.000 332 211 11 2 307 8 327 6.63e-18 85.1
MS.gene47726.t1 AT4G09500 28.780 205 126 4 268 471 225 410 3.88e-17 84.0

Find 143 sgRNAs with CRISPR-Local

Find 161 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATCTTCCTCCACTTATTT+AGG 0.197509 5.3:+72989766 MS.gene47726:CDS
AGACTCAATGGTGCCAGTTT+TGG 0.220013 5.3:-72989134 None:intergenic
ACGGGGATTGGAAGGGTTAT+TGG 0.231852 5.3:+72989400 MS.gene47726:CDS
TATTCCTCTCTCAATCTTAT+TGG 0.233947 5.3:-72989659 None:intergenic
TGATTACCCTCTTTCTGATT+TGG 0.246281 5.3:+72989342 MS.gene47726:CDS
ACACTCGAGAGCATATATTT+TGG 0.279632 5.3:+72989496 MS.gene47726:CDS
TTCAAATGAATTTACTATAA+TGG 0.282691 5.3:-72989017 None:intergenic
TGGCTGGATGAGCTAGTATT+TGG 0.287763 5.3:-72989438 None:intergenic
GGAGATTGCTTTGGATTATA+AGG 0.288776 5.3:+72989600 MS.gene47726:CDS
TTTGGGCTCGGGGTTTAATA+AGG 0.293893 5.3:-72989116 None:intergenic
GATTGATTATATTATGAATC+AGG 0.301103 5.3:+72989795 MS.gene47726:CDS
AGCTAGTATTTGGGCCTGTT+GGG 0.304204 5.3:-72989428 None:intergenic
AGTAAGAAAACTTTGTTAGA+AGG 0.307566 5.3:+72989742 MS.gene47726:CDS
CAGAACGTGGTTCAGTGTTT+GGG 0.310962 5.3:-72988613 None:intergenic
CGCAGGGACGGAAAATTCTT+TGG 0.311860 5.3:-72988768 None:intergenic
TTTCATGCTACAAAAGGAAT+TGG 0.327048 5.3:+72988949 MS.gene47726:CDS
ACAGAACGTGGTTCAGTGTT+TGG 0.332969 5.3:-72988614 None:intergenic
GCGCTCATCTTCTTCACTTC+CGG 0.333229 5.3:+72988788 MS.gene47726:CDS
TAGATCAGGATGAGAGAAAA+AGG 0.347511 5.3:-72989065 None:intergenic
AAACTGGGCAACGAGTTAAT+TGG 0.349725 5.3:-72988929 None:intergenic
TTGGCAGTTACAAGATAGTT+AGG 0.352746 5.3:-72989640 None:intergenic
GTTCAAGCAGAGTGTGAATA+TGG 0.354494 5.3:-72988835 None:intergenic
TCCTGATCTAGCAGAATTAC+TGG 0.357798 5.3:+72989078 MS.gene47726:CDS
ATAAGATTGAGAGAGGAATA+AGG 0.358958 5.3:+72989662 MS.gene47726:CDS
TTAGATCGAACGACGGGGAT+TGG 0.368251 5.3:+72989388 MS.gene47726:CDS
GGCTGGATGAGCTAGTATTT+GGG 0.379195 5.3:-72989437 None:intergenic
TTAAACCCCGAGCCCAAAAC+TGG 0.382914 5.3:+72989121 MS.gene47726:CDS
GGAATCGGGTTTGCAAAACT+TGG 0.383891 5.3:-72988908 None:intergenic
GTTCGATCTAAGAATCCTTC+AGG 0.390486 5.3:-72989376 None:intergenic
TAGAGTGGCCACGCGGCAAT+AGG 0.396729 5.3:-72989523 None:intergenic
ACTTCCGGTGTTGCTTTCCT+TGG 0.398776 5.3:+72988803 MS.gene47726:CDS
GAGACGGCTTGTTTGACGTT+TGG 0.399431 5.3:-72988665 None:intergenic
GCCACTCTATGCTGAGCAAC+AGG 0.411377 5.3:+72989537 MS.gene47726:CDS
TGGATAAGGATGGAGAGTTC+AGG 0.411408 5.3:+72989692 MS.gene47726:CDS
GAGCTAGTATTTGGGCCTGT+TGG 0.413330 5.3:-72989429 None:intergenic
CGTTTGGTTTCTGAGCTTCA+AGG 0.419890 5.3:-72988649 None:intergenic
GGCAACGAGTTAATTGGAAT+CGG 0.420896 5.3:-72988923 None:intergenic
TTATGACTAAGACAGTTATT+CGG 0.426306 5.3:-72988490 None:intergenic
TTGGGCTCGGGGTTTAATAA+GGG 0.426332 5.3:-72989115 None:intergenic
TTCTTTGGCAATATCAATCA+TGG 0.429997 5.3:-72988753 None:intergenic
GGTTATTGGATGGGCCCAAC+AGG 0.437520 5.3:+72989414 MS.gene47726:CDS
TCCCATTTCAAATTCTCTCC+AGG 0.440052 5.3:+72988562 MS.gene47726:CDS
AATAGGTGTGGAGATTGCTT+TGG 0.444878 5.3:+72989591 MS.gene47726:CDS
ATCGAACGACGGGGATTGGA+AGG 0.449591 5.3:+72989392 MS.gene47726:CDS
ATTTGCTTTCTTGACGCCAC+TGG 0.449685 5.3:-72988993 None:intergenic
AATAAGGAATGTGTTGGATA+AGG 0.452779 5.3:+72989678 MS.gene47726:CDS
GGTGAAACCATGGGGCCCTT+CGG 0.453138 5.3:-72989316 None:intergenic
TTTATCCCTTCTCCTGGAGT+TGG 0.455016 5.3:+72988410 MS.gene47726:CDS
ACCAGTAATTCTGCTAGATC+AGG 0.457970 5.3:-72989079 None:intergenic
TATAAGGTGGGGTTTAATGA+AGG 0.461572 5.3:+72989616 MS.gene47726:CDS
GCCCAGTTTCATGCTACAAA+AGG 0.466725 5.3:+72988943 MS.gene47726:CDS
GACCTGGAGAGAATTTGAAA+TGG 0.470436 5.3:-72988564 None:intergenic
TACGCAGAGACCACACAAAA+CGG 0.477878 5.3:-72989285 None:intergenic
GGGCTCGTTCAATGAGGATC+AGG 0.480278 5.3:+72989225 MS.gene47726:CDS
ATTGCTTTGGATTATAAGGT+GGG 0.483700 5.3:+72989604 MS.gene47726:CDS
ACCTGGAGAGAATTTGAAAT+GGG 0.486693 5.3:-72988563 None:intergenic
GCAACGAGTTAATTGGAATC+GGG 0.487836 5.3:-72988922 None:intergenic
ACGCAGAGACCACACAAAAC+GGG 0.500337 5.3:-72989284 None:intergenic
GTAGTGTTTATCCCTTCTCC+TGG 0.501161 5.3:+72988404 MS.gene47726:CDS
GGATTCTTAGATCGAACGAC+GGG 0.503118 5.3:+72989382 MS.gene47726:CDS
TTGGTGTGTGAGCTGAAAAT+AGG 0.506342 5.3:+72989574 MS.gene47726:CDS
TCCTTCTCTAGTAGTGAGGT+TGG 0.510324 5.3:-72988687 None:intergenic
TAATCAGAGGGTGAAACCAT+GGG 0.510410 5.3:-72989325 None:intergenic
AGGAATGTGTTGGATAAGGA+TGG 0.512366 5.3:+72989682 MS.gene47726:CDS
GATTGGAAGGGTTATTGGAT+GGG 0.513784 5.3:+72989405 MS.gene47726:CDS
GATTTGTTTCGCATTGTGGT+TGG 0.515433 5.3:+72989467 MS.gene47726:CDS
ATTGATTCCAAATCAGAAAG+AGG 0.516556 5.3:-72989349 None:intergenic
ACCATGGGGCCCTTCGGTGA+GGG 0.521576 5.3:-72989310 None:intergenic
AATCAAACGACCTAAATAAG+TGG 0.521906 5.3:-72989776 None:intergenic
GGATTGGAAGGGTTATTGGA+TGG 0.522680 5.3:+72989404 MS.gene47726:CDS
TTATTCGGAGGCGGTTATCA+CGG 0.528433 5.3:-72988475 None:intergenic
GATTGCTTTGGATTATAAGG+TGG 0.528562 5.3:+72989603 MS.gene47726:CDS
GAATCGGGTTTGCAAAACTT+GGG 0.529708 5.3:-72988907 None:intergenic
GGAGAGAATTTGAAATGGGA+AGG 0.530944 5.3:-72988559 None:intergenic
GAAACAAATCCTCCAGTGGC+TGG 0.533755 5.3:-72989454 None:intergenic
TCTAGTAGTGAGGTTGGAGA+CGG 0.537230 5.3:-72988681 None:intergenic
TGATGATCAACCTCCTTCCT+CGG 0.538418 5.3:+72989177 MS.gene47726:CDS
CGGGTTTGCAAAACTTGGGA+TGG 0.540035 5.3:-72988903 None:intergenic
AACCATGGGGCCCTTCGGTG+AGG 0.544309 5.3:-72989311 None:intergenic
AGAACGTGGTTCAGTGTTTG+GGG 0.545873 5.3:-72988612 None:intergenic
GGAGGATTTGTTTCGCATTG+TGG 0.546704 5.3:+72989463 MS.gene47726:CDS
GAGAGGAATAAGGAATGTGT+TGG 0.549803 5.3:+72989672 MS.gene47726:CDS
GAAGTGAAGAAGATGAGCGC+AGG 0.550929 5.3:-72988785 None:intergenic
TCTGCGTAAACCCTCACCGA+AGG 0.553823 5.3:+72989300 MS.gene47726:CDS
GGGTTTAATAAGGGTCCCAC+TGG 0.555744 5.3:-72989106 None:intergenic
ATACTAGCTCATCCAGCCAC+TGG 0.555877 5.3:+72989442 MS.gene47726:CDS
TAAGTTGCTGCAGCAGAATG+AGG 0.556722 5.3:+72988877 MS.gene47726:CDS
AAGAAAACTTTGTTAGAAGG+AGG 0.562270 5.3:+72989745 MS.gene47726:CDS
GTAATCAGAGGGTGAAACCA+TGG 0.567481 5.3:-72989326 None:intergenic
ATTCTGGAAGGTTGATGACC+TGG 0.574771 5.3:-72988580 None:intergenic
GAAGAAGATGAGCGCAGGGA+CGG 0.576506 5.3:-72988780 None:intergenic
TTTCTCTGCTTCGGGAGCAG+GGG 0.576927 5.3:+72989205 MS.gene47726:CDS
ATAAGGTGGGGTTTAATGAA+GGG 0.577206 5.3:+72989617 MS.gene47726:CDS
AAATGACCAACTCCAGGAGA+AGG 0.577839 5.3:-72988416 None:intergenic
TTAGAAGCTTTGCAAACTCG+AGG 0.578753 5.3:-72988448 None:intergenic
GAGAGAATTTGAAATGGGAA+GGG 0.579737 5.3:-72988558 None:intergenic
TCGAACGACGGGGATTGGAA+GGG 0.582530 5.3:+72989393 MS.gene47726:CDS
CATCGTCATCTGTGGTGTGT+GGG 0.582818 5.3:-72988517 None:intergenic
TCCAACCTCACTACTAGAGA+AGG 0.584554 5.3:+72988686 MS.gene47726:CDS
CTAAGACAGTTATTCGGAGG+CGG 0.585625 5.3:-72988484 None:intergenic
CATACCAAGGAAAGCAACAC+CGG 0.587607 5.3:-72988807 None:intergenic
GATGATGTCATCAGACTCAA+TGG 0.589569 5.3:-72989146 None:intergenic
ACCCTCACCGAAGGGCCCCA+TGG 0.591808 5.3:+72989309 MS.gene47726:CDS
TTGATTCCAAATCAGAAAGA+GGG 0.593535 5.3:-72989348 None:intergenic
AAGCTTTGCAAACTCGAGGG+TGG 0.596891 5.3:-72988444 None:intergenic
AATGACCAACTCCAGGAGAA+GGG 0.601746 5.3:-72988415 None:intergenic
AAGTGAAGAAGATGAGCGCA+GGG 0.604104 5.3:-72988784 None:intergenic
TAGAAGCTTTGCAAACTCGA+GGG 0.604562 5.3:-72988447 None:intergenic
CATGTCCTTCTCTAGTAGTG+AGG 0.610194 5.3:-72988691 None:intergenic
TGACTAAGACAGTTATTCGG+AGG 0.610838 5.3:-72988487 None:intergenic
GAATTACTGGTATATCCAGT+GGG 0.614466 5.3:+72989091 MS.gene47726:CDS
CTAGCTCATCCAGCCACTGG+AGG 0.615888 5.3:+72989445 MS.gene47726:CDS
GGGGAAGAGAACATTCTGGA+AGG 0.616011 5.3:-72988592 None:intergenic
GCCTGTTGCTCAGCATAGAG+TGG 0.616657 5.3:-72989538 None:intergenic
TCAGAAAGAGGGTAATCAGA+GGG 0.619200 5.3:-72989337 None:intergenic
GAAACTAAATGACCAACTCC+AGG 0.620913 5.3:-72988422 None:intergenic
CTGCGTAAACCCTCACCGAA+GGG 0.622524 5.3:+72989301 MS.gene47726:CDS
GCACATGCTATTGAGAATTG+TGG 0.623375 5.3:+72989259 MS.gene47726:CDS
AGAATTACTGGTATATCCAG+TGG 0.625918 5.3:+72989090 MS.gene47726:CDS
CTCACTACTAGAGAAGGACA+TGG 0.627122 5.3:+72988692 MS.gene47726:CDS
ACATCGTCATCTGTGGTGTG+TGG 0.629060 5.3:-72988518 None:intergenic
TGATCAACCTCCTTCCTCGG+TGG 0.633817 5.3:+72989180 MS.gene47726:CDS
ACTGCCAATAAGATTGAGAG+AGG 0.638864 5.3:+72989655 MS.gene47726:CDS
TTGCTTTGGATTATAAGGTG+GGG 0.638895 5.3:+72989605 MS.gene47726:CDS
GACATCGACATCGTCATCTG+TGG 0.644089 5.3:-72988525 None:intergenic
AATCAGAGGGTGAAACCATG+GGG 0.648190 5.3:-72989324 None:intergenic
AGTCTGATGACATCATCAAG+TGG 0.651112 5.3:+72989152 MS.gene47726:CDS
ATCAGAAAGAGGGTAATCAG+AGG 0.659383 5.3:-72989338 None:intergenic
CAAACGACCTAAATAAGTGG+AGG 0.666093 5.3:-72989773 None:intergenic
GAGCAGGGGCTCGTTCAATG+AGG 0.670375 5.3:+72989219 MS.gene47726:CDS
GTGTGAGCTGAAAATAGGTG+TGG 0.670560 5.3:+72989579 MS.gene47726:CDS
CTCAGCATAGAGTGGCCACG+CGG 0.675818 5.3:-72989530 None:intergenic
GAACGTGGTTCAGTGTTTGG+GGG 0.676723 5.3:-72988611 None:intergenic
AGAGCGTTCATGACAGAACG+TGG 0.677391 5.3:-72988626 None:intergenic
ATGCGAAACAAATCCTCCAG+TGG 0.678028 5.3:-72989458 None:intergenic
TGAAGAGTTAGAATCGCATG+CGG 0.681527 5.3:+72989036 MS.gene47726:CDS
AGGATTCTTAGATCGAACGA+CGG 0.683422 5.3:+72989381 MS.gene47726:CDS
GCAGAACATGTCAACAACGA+AGG 0.691669 5.3:-72988726 None:intergenic
GAATATGGAGCATCATACCA+AGG 0.698368 5.3:-72988820 None:intergenic
TTTGGCAATATCAATCATGG+TGG 0.713934 5.3:-72988750 None:intergenic
GATTCTTAGATCGAACGACG+GGG 0.718922 5.3:+72989383 MS.gene47726:CDS
TGTCAACAACGAAGGCAGCG+AGG 0.748241 5.3:-72988718 None:intergenic
TTGGTGTGCCTATTGCCGCG+TGG 0.783717 5.3:+72989515 MS.gene47726:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAAATGAATTTACTATAA+TGG - chr5.3:72989020-72989039 None:intergenic 15.0%
!! GATTGATTATATTATGAATC+AGG + chr5.3:72989795-72989814 MS.gene47726:CDS 20.0%
! AGTAAGAAAACTTTGTTAGA+AGG + chr5.3:72989742-72989761 MS.gene47726:CDS 25.0%
! TTATGACTAAGACAGTTATT+CGG - chr5.3:72988493-72988512 None:intergenic 25.0%
AAGAAAACTTTGTTAGAAGG+AGG + chr5.3:72989745-72989764 MS.gene47726:CDS 30.0%
AATAAGGAATGTGTTGGATA+AGG + chr5.3:72989678-72989697 MS.gene47726:CDS 30.0%
AATCAAACGACCTAAATAAG+TGG - chr5.3:72989779-72989798 None:intergenic 30.0%
ATAAGATTGAGAGAGGAATA+AGG + chr5.3:72989662-72989681 MS.gene47726:CDS 30.0%
TATTCCTCTCTCAATCTTAT+TGG - chr5.3:72989662-72989681 None:intergenic 30.0%
TTCTTTGGCAATATCAATCA+TGG - chr5.3:72988756-72988775 None:intergenic 30.0%
TTGATTCCAAATCAGAAAGA+GGG - chr5.3:72989351-72989370 None:intergenic 30.0%
TTTCATGCTACAAAAGGAAT+TGG + chr5.3:72988949-72988968 MS.gene47726:CDS 30.0%
! ATTGATTCCAAATCAGAAAG+AGG - chr5.3:72989352-72989371 None:intergenic 30.0%
! ATTGCTTTGGATTATAAGGT+GGG + chr5.3:72989604-72989623 MS.gene47726:CDS 30.0%
! TTGGAATCAATTTTACCTGA+AGG + chr5.3:72989361-72989380 MS.gene47726:CDS 30.0%
AGAATTACTGGTATATCCAG+TGG + chr5.3:72989090-72989109 MS.gene47726:CDS 35.0%
ATAAGGTGGGGTTTAATGAA+GGG + chr5.3:72989617-72989636 MS.gene47726:CDS 35.0%
GAATTACTGGTATATCCAGT+GGG + chr5.3:72989091-72989110 MS.gene47726:CDS 35.0%
TAGATCAGGATGAGAGAAAA+AGG - chr5.3:72989068-72989087 None:intergenic 35.0%
TATAAGGTGGGGTTTAATGA+AGG + chr5.3:72989616-72989635 MS.gene47726:CDS 35.0%
TGATTACCCTCTTTCTGATT+TGG + chr5.3:72989342-72989361 MS.gene47726:CDS 35.0%
TTGGCAGTTACAAGATAGTT+AGG - chr5.3:72989643-72989662 None:intergenic 35.0%
TTTGGCAATATCAATCATGG+TGG - chr5.3:72988753-72988772 None:intergenic 35.0%
! ACAGGCTAATGCTTTTGAAT+TGG + chr5.3:72989555-72989574 MS.gene47726:CDS 35.0%
! ACCTGGAGAGAATTTGAAAT+GGG - chr5.3:72988566-72988585 None:intergenic 35.0%
! GAGAGAATTTGAAATGGGAA+GGG - chr5.3:72988561-72988580 None:intergenic 35.0%
! GATTGCTTTGGATTATAAGG+TGG + chr5.3:72989603-72989622 MS.gene47726:CDS 35.0%
! GGAGATTGCTTTGGATTATA+AGG + chr5.3:72989600-72989619 MS.gene47726:CDS 35.0%
! TCCTTTTGTAGCATGAAACT+GGG - chr5.3:72988947-72988966 None:intergenic 35.0%
! TTCCTTTTGTAGCATGAAAC+TGG - chr5.3:72988948-72988967 None:intergenic 35.0%
! TTGCTTTGGATTATAAGGTG+GGG + chr5.3:72989605-72989624 MS.gene47726:CDS 35.0%
! TTTTTCATGAACTTTGCCAG+TGG + chr5.3:72988977-72988996 MS.gene47726:CDS 35.0%
!! ACACTCGAGAGCATATATTT+TGG + chr5.3:72989496-72989515 MS.gene47726:CDS 35.0%
AAACTGGGCAACGAGTTAAT+TGG - chr5.3:72988932-72988951 None:intergenic 40.0%
AATAGGTGTGGAGATTGCTT+TGG + chr5.3:72989591-72989610 MS.gene47726:CDS 40.0%
ACCAGTAATTCTGCTAGATC+AGG - chr5.3:72989082-72989101 None:intergenic 40.0%
ACTGCCAATAAGATTGAGAG+AGG + chr5.3:72989655-72989674 MS.gene47726:CDS 40.0%
AGGAATGTGTTGGATAAGGA+TGG + chr5.3:72989682-72989701 MS.gene47726:CDS 40.0%
AGGATTCTTAGATCGAACGA+CGG + chr5.3:72989381-72989400 MS.gene47726:CDS 40.0%
AGTCTGATGACATCATCAAG+TGG + chr5.3:72989152-72989171 MS.gene47726:CDS 40.0%
ATCAGAAAGAGGGTAATCAG+AGG - chr5.3:72989341-72989360 None:intergenic 40.0%
CAAACGACCTAAATAAGTGG+AGG - chr5.3:72989776-72989795 None:intergenic 40.0%
GAAACTAAATGACCAACTCC+AGG - chr5.3:72988425-72988444 None:intergenic 40.0%
GAATCGGGTTTGCAAAACTT+GGG - chr5.3:72988910-72988929 None:intergenic 40.0%
GACCTGGAGAGAATTTGAAA+TGG - chr5.3:72988567-72988586 None:intergenic 40.0%
GAGAGGAATAAGGAATGTGT+TGG + chr5.3:72989672-72989691 MS.gene47726:CDS 40.0%
GATGATGTCATCAGACTCAA+TGG - chr5.3:72989149-72989168 None:intergenic 40.0%
GATTGGAAGGGTTATTGGAT+GGG + chr5.3:72989405-72989424 MS.gene47726:CDS 40.0%
GCAACGAGTTAATTGGAATC+GGG - chr5.3:72988925-72988944 None:intergenic 40.0%
GCACATGCTATTGAGAATTG+TGG + chr5.3:72989259-72989278 MS.gene47726:CDS 40.0%
GGATCTTCCTCCACTTATTT+AGG + chr5.3:72989766-72989785 MS.gene47726:CDS 40.0%
GGCAACGAGTTAATTGGAAT+CGG - chr5.3:72988926-72988945 None:intergenic 40.0%
GTTCAAGCAGAGTGTGAATA+TGG - chr5.3:72988838-72988857 None:intergenic 40.0%
GTTCGATCTAAGAATCCTTC+AGG - chr5.3:72989379-72989398 None:intergenic 40.0%
TAATCAGAGGGTGAAACCAT+GGG - chr5.3:72989328-72989347 None:intergenic 40.0%
TAGAAGCTTTGCAAACTCGA+GGG - chr5.3:72988450-72988469 None:intergenic 40.0%
TCAGAAAGAGGGTAATCAGA+GGG - chr5.3:72989340-72989359 None:intergenic 40.0%
TCCCATTTCAAATTCTCTCC+AGG + chr5.3:72988562-72988581 MS.gene47726:CDS 40.0%
TCCTGATCTAGCAGAATTAC+TGG + chr5.3:72989078-72989097 MS.gene47726:CDS 40.0%
TGAAGAGTTAGAATCGCATG+CGG + chr5.3:72989036-72989055 MS.gene47726:CDS 40.0%
TGACTAAGACAGTTATTCGG+AGG - chr5.3:72988490-72988509 None:intergenic 40.0%
TTAGAAGCTTTGCAAACTCG+AGG - chr5.3:72988451-72988470 None:intergenic 40.0%
TTGGTGTGTGAGCTGAAAAT+AGG + chr5.3:72989574-72989593 MS.gene47726:CDS 40.0%
! GAATATGGAGCATCATACCA+AGG - chr5.3:72988823-72988842 None:intergenic 40.0%
! GATTTGTTTCGCATTGTGGT+TGG + chr5.3:72989467-72989486 MS.gene47726:CDS 40.0%
! GGAGAGAATTTGAAATGGGA+AGG - chr5.3:72988562-72988581 None:intergenic 40.0%
AAATGACCAACTCCAGGAGA+AGG - chr5.3:72988419-72988438 None:intergenic 45.0%
AAGTGAAGAAGATGAGCGCA+GGG - chr5.3:72988787-72988806 None:intergenic 45.0%
AATCAGAGGGTGAAACCATG+GGG - chr5.3:72989327-72989346 None:intergenic 45.0%
AATGACCAACTCCAGGAGAA+GGG - chr5.3:72988418-72988437 None:intergenic 45.0%
ACAGAACGTGGTTCAGTGTT+TGG - chr5.3:72988617-72988636 None:intergenic 45.0%
AGAACGTGGTTCAGTGTTTG+GGG - chr5.3:72988615-72988634 None:intergenic 45.0%
AGCTAGTATTTGGGCCTGTT+GGG - chr5.3:72989431-72989450 None:intergenic 45.0%
ATGCGAAACAAATCCTCCAG+TGG - chr5.3:72989461-72989480 None:intergenic 45.0%
ATTTGCTTTCTTGACGCCAC+TGG - chr5.3:72988996-72989015 None:intergenic 45.0%
CAGAACGTGGTTCAGTGTTT+GGG - chr5.3:72988616-72988635 None:intergenic 45.0%
CATACCAAGGAAAGCAACAC+CGG - chr5.3:72988810-72988829 None:intergenic 45.0%
CATGTCCTTCTCTAGTAGTG+AGG - chr5.3:72988694-72988713 None:intergenic 45.0%
CTAAGACAGTTATTCGGAGG+CGG - chr5.3:72988487-72988506 None:intergenic 45.0%
CTCACTACTAGAGAAGGACA+TGG + chr5.3:72988692-72988711 MS.gene47726:CDS 45.0%
GATTCTTAGATCGAACGACG+GGG + chr5.3:72989383-72989402 MS.gene47726:CDS 45.0%
GCAGAACATGTCAACAACGA+AGG - chr5.3:72988729-72988748 None:intergenic 45.0%
GCCCAGTTTCATGCTACAAA+AGG + chr5.3:72988943-72988962 MS.gene47726:CDS 45.0%
GGAATCGGGTTTGCAAAACT+TGG - chr5.3:72988911-72988930 None:intergenic 45.0%
GGATTCTTAGATCGAACGAC+GGG + chr5.3:72989382-72989401 MS.gene47726:CDS 45.0%
GGATTGGAAGGGTTATTGGA+TGG + chr5.3:72989404-72989423 MS.gene47726:CDS 45.0%
GGCTGGATGAGCTAGTATTT+GGG - chr5.3:72989440-72989459 None:intergenic 45.0%
GTAATCAGAGGGTGAAACCA+TGG - chr5.3:72989329-72989348 None:intergenic 45.0%
GTAGTGTTTATCCCTTCTCC+TGG + chr5.3:72988404-72988423 MS.gene47726:CDS 45.0%
GTGTGAGCTGAAAATAGGTG+TGG + chr5.3:72989579-72989598 MS.gene47726:CDS 45.0%
TAAGTTGCTGCAGCAGAATG+AGG + chr5.3:72988877-72988896 MS.gene47726:CDS 45.0%
TACGCAGAGACCACACAAAA+CGG - chr5.3:72989288-72989307 None:intergenic 45.0%
TCCAACCTCACTACTAGAGA+AGG + chr5.3:72988686-72988705 MS.gene47726:CDS 45.0%
TCCTTCTCTAGTAGTGAGGT+TGG - chr5.3:72988690-72988709 None:intergenic 45.0%
TCTAGTAGTGAGGTTGGAGA+CGG - chr5.3:72988684-72988703 None:intergenic 45.0%
TGATGATCAACCTCCTTCCT+CGG + chr5.3:72989177-72989196 MS.gene47726:CDS 45.0%
TGGATAAGGATGGAGAGTTC+AGG + chr5.3:72989692-72989711 MS.gene47726:CDS 45.0%
TGGCTGGATGAGCTAGTATT+TGG - chr5.3:72989441-72989460 None:intergenic 45.0%
TTATTCGGAGGCGGTTATCA+CGG - chr5.3:72988478-72988497 None:intergenic 45.0%
TTGGGCTCGGGGTTTAATAA+GGG - chr5.3:72989118-72989137 None:intergenic 45.0%
TTTATCCCTTCTCCTGGAGT+TGG + chr5.3:72988410-72988429 MS.gene47726:CDS 45.0%
TTTGGGCTCGGGGTTTAATA+AGG - chr5.3:72989119-72989138 None:intergenic 45.0%
TTTGGGGGAAGAGAACATTC+TGG - chr5.3:72988599-72988618 None:intergenic 45.0%
! CGTTTGGTTTCTGAGCTTCA+AGG - chr5.3:72988652-72988671 None:intergenic 45.0%
! GGAGGATTTGTTTCGCATTG+TGG + chr5.3:72989463-72989482 MS.gene47726:CDS 45.0%
! TCGGTGGTTTTTCTCTGCTT+CGG + chr5.3:72989196-72989215 MS.gene47726:CDS 45.0%
!! AGACTCAATGGTGCCAGTTT+TGG - chr5.3:72989137-72989156 None:intergenic 45.0%
!! ATTCTGGAAGGTTGATGACC+TGG - chr5.3:72988583-72988602 None:intergenic 45.0%
!! GACTCAATGGTGCCAGTTTT+GGG - chr5.3:72989136-72989155 None:intergenic 45.0%
AAGCTTTGCAAACTCGAGGG+TGG - chr5.3:72988447-72988466 None:intergenic 50.0%
ACATCGTCATCTGTGGTGTG+TGG - chr5.3:72988521-72988540 None:intergenic 50.0%
ACGCAGAGACCACACAAAAC+GGG - chr5.3:72989287-72989306 None:intergenic 50.0%
ACGGGGATTGGAAGGGTTAT+TGG + chr5.3:72989400-72989419 MS.gene47726:CDS 50.0%
AGAAAAACCACCGAGGAAGG+AGG - chr5.3:72989190-72989209 None:intergenic 50.0%
ATACTAGCTCATCCAGCCAC+TGG + chr5.3:72989442-72989461 MS.gene47726:CDS 50.0%
CAGAGAAAAACCACCGAGGA+AGG - chr5.3:72989193-72989212 None:intergenic 50.0%
CATCGTCATCTGTGGTGTGT+GGG - chr5.3:72988520-72988539 None:intergenic 50.0%
CGCAGGGACGGAAAATTCTT+TGG - chr5.3:72988771-72988790 None:intergenic 50.0%
CGGGTTTGCAAAACTTGGGA+TGG - chr5.3:72988906-72988925 None:intergenic 50.0%
GAAACAAATCCTCCAGTGGC+TGG - chr5.3:72989457-72989476 None:intergenic 50.0%
GAACGTGGTTCAGTGTTTGG+GGG - chr5.3:72988614-72988633 None:intergenic 50.0%
GAAGCAGAGAAAAACCACCG+AGG - chr5.3:72989197-72989216 None:intergenic 50.0%
GAAGTGAAGAAGATGAGCGC+AGG - chr5.3:72988788-72988807 None:intergenic 50.0%
GACATCGACATCGTCATCTG+TGG - chr5.3:72988528-72988547 None:intergenic 50.0%
GAGCTAGTATTTGGGCCTGT+TGG - chr5.3:72989432-72989451 None:intergenic 50.0%
GCGCTCATCTTCTTCACTTC+CGG + chr5.3:72988788-72988807 MS.gene47726:CDS 50.0%
GGGGAAGAGAACATTCTGGA+AGG - chr5.3:72988595-72988614 None:intergenic 50.0%
GGGTTTAATAAGGGTCCCAC+TGG - chr5.3:72989109-72989128 None:intergenic 50.0%
TTAAACCCCGAGCCCAAAAC+TGG + chr5.3:72989121-72989140 MS.gene47726:CDS 50.0%
TTAGATCGAACGACGGGGAT+TGG + chr5.3:72989388-72989407 MS.gene47726:CDS 50.0%
! AGAGCGTTCATGACAGAACG+TGG - chr5.3:72988629-72988648 None:intergenic 50.0%
! ATTGTGGTGCCCGTTTTGTG+TGG + chr5.3:72989275-72989294 MS.gene47726:CDS 50.0%
! CGGTGGTTTTTCTCTGCTTC+GGG + chr5.3:72989197-72989216 MS.gene47726:CDS 50.0%
! GAGACGGCTTGTTTGACGTT+TGG - chr5.3:72988668-72988687 None:intergenic 50.0%
! TTTTCTCTGCTTCGGGAGCA+GGG + chr5.3:72989204-72989223 MS.gene47726:CDS 50.0%
! TTTTTCTCTGCTTCGGGAGC+AGG + chr5.3:72989203-72989222 MS.gene47726:CDS 50.0%
!! ACTTCCGGTGTTGCTTTCCT+TGG + chr5.3:72988803-72988822 MS.gene47726:CDS 50.0%
!!! AATGGTGCCAGTTTTGGGCT+CGG - chr5.3:72989131-72989150 None:intergenic 50.0%
ATCGAACGACGGGGATTGGA+AGG + chr5.3:72989392-72989411 MS.gene47726:CDS 55.0%
CTGCGTAAACCCTCACCGAA+GGG + chr5.3:72989301-72989320 MS.gene47726:CDS 55.0%
GAAGAAGATGAGCGCAGGGA+CGG - chr5.3:72988783-72988802 None:intergenic 55.0%
GCCACTCTATGCTGAGCAAC+AGG + chr5.3:72989537-72989556 MS.gene47726:CDS 55.0%
GCCTGTTGCTCAGCATAGAG+TGG - chr5.3:72989541-72989560 None:intergenic 55.0%
GGGCTCGTTCAATGAGGATC+AGG + chr5.3:72989225-72989244 MS.gene47726:CDS 55.0%
GGTTATTGGATGGGCCCAAC+AGG + chr5.3:72989414-72989433 MS.gene47726:CDS 55.0%
TCGAACGACGGGGATTGGAA+GGG + chr5.3:72989393-72989412 MS.gene47726:CDS 55.0%
TCTGCGTAAACCCTCACCGA+AGG + chr5.3:72989300-72989319 MS.gene47726:CDS 55.0%
TGATCAACCTCCTTCCTCGG+TGG + chr5.3:72989180-72989199 MS.gene47726:CDS 55.0%
TGTCAACAACGAAGGCAGCG+AGG - chr5.3:72988721-72988740 None:intergenic 55.0%
TTTCTCTGCTTCGGGAGCAG+GGG + chr5.3:72989205-72989224 MS.gene47726:CDS 55.0%
!!! ATGGTGCCAGTTTTGGGCTC+GGG - chr5.3:72989130-72989149 None:intergenic 55.0%
CTAGCTCATCCAGCCACTGG+AGG + chr5.3:72989445-72989464 MS.gene47726:CDS 60.0%
CTCAGCATAGAGTGGCCACG+CGG - chr5.3:72989533-72989552 None:intergenic 60.0%
GAGCAGGGGCTCGTTCAATG+AGG + chr5.3:72989219-72989238 MS.gene47726:CDS 60.0%
GGTGAAACCATGGGGCCCTT+CGG - chr5.3:72989319-72989338 None:intergenic 60.0%
TAGAGTGGCCACGCGGCAAT+AGG - chr5.3:72989526-72989545 None:intergenic 60.0%
TTGGTGTGCCTATTGCCGCG+TGG + chr5.3:72989515-72989534 MS.gene47726:CDS 60.0%
!!! TGGTGCCAGTTTTGGGCTCG+GGG - chr5.3:72989129-72989148 None:intergenic 60.0%
AACCATGGGGCCCTTCGGTG+AGG - chr5.3:72989314-72989333 None:intergenic 65.0%
ACCATGGGGCCCTTCGGTGA+GGG - chr5.3:72989313-72989332 None:intergenic 65.0%
ACCCTCACCGAAGGGCCCCA+TGG + chr5.3:72989309-72989328 MS.gene47726:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 72988389 72989828 72988389 ID=MS.gene47726
chr5.3 mRNA 72988389 72989828 72988389 ID=MS.gene47726.t1;Parent=MS.gene47726
chr5.3 exon 72988389 72989828 72988389 ID=MS.gene47726.t1.exon1;Parent=MS.gene47726.t1
chr5.3 CDS 72988389 72989828 72988389 ID=cds.MS.gene47726.t1;Parent=MS.gene47726.t1
Gene Sequence

>MS.gene47726

ATGAAGAAAGCAGAAGTAGTGTTTATCCCTTCTCCTGGAGTTGGTCATTTAGTTTCCACCCTCGAGTTTGCAAAGCTTCTAATCAACCGTGATAACCGCCTCCGAATAACTGTCTTAGTCATAAAATTCCCACACACCACAGATGACGATGTCGATGTCTACACAAAATCCCTTCCCATTTCAAATTCTCTCCAGGTCATCAACCTTCCAGAATGTTCTCTTCCCCCAAACACTGAACCACGTTCTGTCATGAACGCTCTCCTTGAAGCTCAGAAACCAAACGTCAAACAAGCCGTCTCCAACCTCACTACTAGAGAAGGACATGGACACCTCGCTGCCTTCGTTGTTGACATGTTCTGCACCACCATGATTGATATTGCCAAAGAATTTTCCGTCCCTGCGCTCATCTTCTTCACTTCCGGTGTTGCTTTCCTTGGTATGATGCTCCATATTCACACTCTGCTTGAACGAGACAACATTGATTCAACTAAGTTGCTGCAGCAGAATGAGGTAGCCATCCCAAGTTTTGCAAACCCGATTCCAATTAACTCGTTGCCCAGTTTCATGCTACAAAAGGAATTGGAATCATTTTTCATGAACTTTGCCAGTGGCGTCAAGAAAGCAAATGCCATTATAGTAAATTCATTTGAAGAGTTAGAATCGCATGCGGTTCAATCCTTTTTCTCTCATCCTGATCTAGCAGAATTACTGGTATATCCAGTGGGACCCTTATTAAACCCCGAGCCCAAAACTGGCACCATTGAGTCTGATGACATCATCAAGTGGCTTGATGATCAACCTCCTTCCTCGGTGGTTTTTCTCTGCTTCGGGAGCAGGGGCTCGTTCAATGAGGATCAGGTTAAAGAGATTGCACATGCTATTGAGAATTGTGGTGCCCGTTTTGTGTGGTCTCTGCGTAAACCCTCACCGAAGGGCCCCATGGTTTCACCCTCTGATTACCCTCTTTCTGATTTGGAATCAATTTTACCTGAAGGATTCTTAGATCGAACGACGGGGATTGGAAGGGTTATTGGATGGGCCCAACAGGCCCAAATACTAGCTCATCCAGCCACTGGAGGATTTGTTTCGCATTGTGGTTGGAATTCAACACTCGAGAGCATATATTTTGGTGTGCCTATTGCCGCGTGGCCACTCTATGCTGAGCAACAGGCTAATGCTTTTGAATTGGTGTGTGAGCTGAAAATAGGTGTGGAGATTGCTTTGGATTATAAGGTGGGGTTTAATGAAGGGCCTAACTATCTTGTAACTGCCAATAAGATTGAGAGAGGAATAAGGAATGTGTTGGATAAGGATGGAGAGTTCAGGAAAAAAGTGAAAGTGATGAGTGAAAAGAGTAAGAAAACTTTGTTAGAAGGAGGATCTTCCTCCACTTATTTAGGTCGTTTGATTGATTATATTATGAATCAGGTATCAGATTAA
Protein sequence

>MS.gene47726.t1

MKKAEVVFIPSPGVGHLVSTLEFAKLLINRDNRLRITVLVIKFPHTTDDDVDVYTKSLPISNSLQVINLPECSLPPNTEPRSVMNALLEAQKPNVKQAVSNLTTREGHGHLAAFVVDMFCTTMIDIAKEFSVPALIFFTSGVAFLGMMLHIHTLLERDNIDSTKLLQQNEVAIPSFANPIPINSLPSFMLQKELESFFMNFASGVKKANAIIVNSFEELESHAVQSFFSHPDLAELLVYPVGPLLNPEPKTGTIESDDIIKWLDDQPPSSVVFLCFGSRGSFNEDQVKEIAHAIENCGARFVWSLRKPSPKGPMVSPSDYPLSDLESILPEGFLDRTTGIGRVIGWAQQAQILAHPATGGFVSHCGWNSTLESIYFGVPIAAWPLYAEQQANAFELVCELKIGVEIALDYKVGFNEGPNYLVTANKIERGIRNVLDKDGEFRKKVKVMSEKSKKTLLEGGSSSTYLGRLIDYIMNQVSD