AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017045

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017045.t1 MTR_5g090630 82.143 476 78 1 1 476 1 469 0.0 803
MS.gene017045.t1 MTR_5g090660 75.579 475 116 0 1 475 1 475 0.0 757
MS.gene017045.t1 MTR_5g090670 76.042 480 111 3 1 476 1 480 0.0 754
MS.gene017045.t1 MTR_5g090700 75.833 480 112 2 1 476 1 480 0.0 749
MS.gene017045.t1 MTR_5g090580 77.035 479 106 4 1 476 1 478 0.0 744
MS.gene017045.t1 MTR_5g090610 75.420 476 105 1 1 476 1 464 0.0 739
MS.gene017045.t1 MTR_5g090620 74.113 479 121 3 1 476 1 479 0.0 721
MS.gene017045.t1 MTR_5g090600 73.795 477 104 4 1 476 1 457 0.0 713
MS.gene017045.t1 MTR_5g098930 67.635 482 139 7 1 476 1 471 0.0 652
MS.gene017045.t1 MTR_5g090650 79.429 350 41 2 1 350 1 319 0.0 548
MS.gene017045.t1 MTR_5g090690 59.611 411 103 5 65 466 18 374 1.20e-149 432
MS.gene017045.t1 MTR_2g040530 44.283 481 238 12 1 470 1 462 1.36e-129 384
MS.gene017045.t1 MTR_2g046750 43.154 482 243 13 1 470 1 463 9.88e-126 374
MS.gene017045.t1 MTR_2g046820 44.191 482 235 13 1 470 1 460 5.86e-125 372
MS.gene017045.t1 MTR_5g070040 41.942 484 245 15 2 473 8 467 2.85e-123 368
MS.gene017045.t1 MTR_5g070090 42.236 483 238 12 2 472 8 461 8.34e-118 353
MS.gene017045.t1 MTR_3g009510 33.470 487 294 14 1 470 1 474 3.25e-82 262
MS.gene017045.t1 MTR_6g023665 35.000 480 277 14 2 468 10 467 1.01e-81 261
MS.gene017045.t1 MTR_6g488280 34.161 483 277 16 2 468 3 460 4.77e-80 256
MS.gene017045.t1 MTR_0428s0010 34.161 483 277 16 2 468 3 460 4.77e-80 256
MS.gene017045.t1 MTR_8g006710 32.365 482 288 16 2 468 3 461 2.64e-75 244
MS.gene017045.t1 MTR_8g465670 31.828 487 290 15 2 469 4 467 3.42e-73 239
MS.gene017045.t1 MTR_8g006730 31.006 487 289 14 2 468 3 462 1.85e-72 237
MS.gene017045.t1 MTR_7g117170 34.167 480 275 17 6 468 16 471 2.61e-72 237
MS.gene017045.t1 MTR_0184s0040 32.985 479 289 14 2 468 18 476 5.98e-72 236
MS.gene017045.t1 MTR_0078s0190 32.985 479 289 14 2 468 18 476 5.98e-72 236
MS.gene017045.t1 MTR_8g006220 32.323 495 286 18 2 469 3 475 2.89e-71 234
MS.gene017045.t1 MTR_8g077590 32.225 481 280 18 6 468 10 462 2.48e-69 228
MS.gene017045.t1 MTR_0078s0060 33.402 485 279 16 2 468 3 461 3.13e-69 228
MS.gene017045.t1 MTR_8g009055 32.165 485 286 15 2 468 3 462 1.09e-68 227
MS.gene017045.t1 MTR_8g006270 33.126 483 283 16 2 469 3 460 2.60e-68 226
MS.gene017045.t1 MTR_0078s0010 31.733 479 296 15 2 468 3 462 3.89e-68 225
MS.gene017045.t1 MTR_8g027870 34.874 476 271 18 6 468 19 468 1.49e-67 224
MS.gene017045.t1 MTR_8g027885 34.591 477 271 19 6 468 19 468 2.44e-67 223
MS.gene017045.t1 MTR_5g019580 31.288 489 296 14 2 468 4 474 8.02e-67 223
MS.gene017045.t1 MTR_8g009050 31.612 484 290 16 2 468 3 462 1.11e-66 221
MS.gene017045.t1 MTR_0184s0030 31.933 476 286 15 2 461 3 456 3.29e-66 220
MS.gene017045.t1 MTR_8g074550 32.335 501 292 16 2 472 5 488 7.59e-65 218
MS.gene017045.t1 MTR_8g012635 30.162 494 283 14 2 465 3 464 1.45e-64 216
MS.gene017045.t1 MTR_1g019510 31.590 478 295 15 2 468 3 459 1.60e-64 216
MS.gene017045.t1 MTR_6g033675 29.652 489 295 13 3 470 2 462 2.83e-64 216
MS.gene017045.t1 MTR_8g009073 31.263 483 291 16 2 468 3 460 4.06e-64 215
MS.gene017045.t1 MTR_7g047030 31.743 482 292 16 2 468 3 462 5.75e-64 214
MS.gene017045.t1 MTR_7g047270 31.743 482 292 16 2 468 3 462 5.75e-64 214
MS.gene017045.t1 MTR_6g033615 32.218 478 279 13 3 468 2 446 3.29e-63 212
MS.gene017045.t1 MTR_6g033625 31.056 483 292 13 3 468 2 460 4.90e-63 212
MS.gene017045.t1 MTR_8g006260 31.381 478 286 18 3 461 4 458 7.74e-63 212
MS.gene017045.t1 MTR_8g008990 31.743 482 294 18 2 468 3 464 2.40e-62 210
MS.gene017045.t1 MTR_8g009063 32.008 478 296 16 2 468 10 469 2.43e-62 210
MS.gene017045.t1 MTR_8g009067 30.000 480 303 14 2 469 3 461 3.09e-62 210
MS.gene017045.t1 MTR_6g005600 30.335 478 303 13 3 468 4 463 4.31e-62 209
MS.gene017045.t1 MTR_8g008970 30.625 480 298 17 2 468 3 460 4.46e-60 211
MS.gene017045.t1 MTR_8g008970 35.088 285 149 8 190 457 529 794 1.24e-37 147
MS.gene017045.t1 MTR_8g012650 30.480 479 293 15 2 461 3 460 6.12e-60 204
MS.gene017045.t1 MTR_6g033725 30.453 486 292 14 3 470 2 459 3.49e-59 202
MS.gene017045.t1 MTR_8g012745 29.854 479 301 14 2 465 3 461 3.74e-59 202
MS.gene017045.t1 MTR_6g033660 28.719 484 299 11 6 470 5 461 5.12e-58 199
MS.gene017045.t1 MTR_5g019580 30.309 485 278 14 2 468 56 498 6.52e-58 199
MS.gene017045.t1 MTR_7g046490 30.290 482 298 16 2 469 3 460 3.09e-55 191
MS.gene017045.t1 MTR_3g479520 30.273 512 281 16 2 475 12 485 1.82e-54 190
MS.gene017045.t1 MTR_8g009067 32.961 358 216 10 120 469 2 343 2.27e-54 186
MS.gene017045.t1 MTR_8g066610 30.181 497 288 15 4 470 8 475 1.02e-53 187
MS.gene017045.t1 MTR_7g102490 29.435 513 288 21 3 473 7 487 1.53e-52 185
MS.gene017045.t1 MTR_7g102460 28.400 500 308 16 3 473 7 485 2.77e-52 184
MS.gene017045.t1 MTR_5g045970 27.821 514 300 19 1 474 12 494 1.67e-50 179
MS.gene017045.t1 MTR_4g095008 29.652 489 292 14 4 473 10 465 1.98e-50 180
MS.gene017045.t1 MTR_4g024020 28.088 502 310 17 3 473 7 488 2.86e-50 179
MS.gene017045.t1 MTR_8g009073 33.526 346 204 11 132 468 3 331 4.59e-50 174
MS.gene017045.t1 MTR_5g464760 29.505 505 290 16 2 473 9 480 7.01e-50 177
MS.gene017045.t1 MTR_0536s0020 28.571 497 293 19 2 470 15 477 8.02e-50 177
MS.gene017045.t1 MTR_4g117890 27.054 499 302 19 2 472 10 474 1.68e-49 176
MS.gene017045.t1 MTR_4g117960 28.119 505 293 20 2 470 8 478 1.73e-49 176
MS.gene017045.t1 MTR_1g062380 26.511 513 309 16 1 474 12 495 2.61e-49 176
MS.gene017045.t1 MTR_3g479490 28.571 511 287 15 2 473 3 474 6.69e-49 174
MS.gene017045.t1 MTR_4g485630 28.947 494 298 19 2 470 6 471 7.73e-49 174
MS.gene017045.t1 MTR_4g031800 27.921 505 292 18 2 472 6 472 3.22e-48 173
MS.gene017045.t1 MTR_5g029800 27.888 502 299 20 2 472 8 477 5.80e-48 172
MS.gene017045.t1 MTR_4g094220 27.096 513 280 20 6 469 8 475 6.76e-48 172
MS.gene017045.t1 MTR_3g069690 27.944 501 283 15 2 476 5 453 1.79e-47 170
MS.gene017045.t1 MTR_1g107360 26.587 504 291 12 4 475 8 464 1.82e-47 171
MS.gene017045.t1 MTR_4g118000 28.893 488 284 21 8 470 15 464 1.86e-47 171
MS.gene017045.t1 MTR_3g079480 28.627 510 290 14 2 474 18 490 1.97e-47 171
MS.gene017045.t1 MTR_4g117980 28.711 512 282 21 2 470 8 479 4.68e-47 170
MS.gene017045.t1 MTR_6g038240 27.423 485 294 13 6 473 12 455 6.72e-47 169
MS.gene017045.t1 MTR_8g012730 33.133 332 166 11 145 460 5 296 7.31e-47 165
MS.gene017045.t1 MTR_4g094920 28.455 492 294 15 4 473 25 480 8.12e-47 169
MS.gene017045.t1 MTR_7g012120 28.221 489 311 15 2 470 13 481 1.10e-46 169
MS.gene017045.t1 MTR_7g102450 27.510 498 296 16 7 475 13 474 5.10e-46 167
MS.gene017045.t1 MTR_0036s0220 29.079 478 268 14 6 450 13 452 6.91e-46 166
MS.gene017045.t1 MTR_1g107285 26.044 503 296 16 4 476 7 463 7.41e-46 166
MS.gene017045.t1 MTR_8g064870 28.321 399 239 11 94 472 102 473 1.61e-45 166
MS.gene017045.t1 MTR_5g464810 28.205 507 284 14 6 473 13 478 1.69e-45 165
MS.gene017045.t1 MTR_5g064240 28.205 507 284 14 6 473 13 478 1.69e-45 165
MS.gene017045.t1 MTR_5g035580 27.236 492 289 13 4 474 12 455 2.05e-45 165
MS.gene017045.t1 MTR_7g071040 27.756 508 293 18 3 470 15 488 4.90e-45 164
MS.gene017045.t1 MTR_7g102550 28.395 486 295 17 7 461 11 474 6.91e-45 164
MS.gene017045.t1 MTR_3g069710 29.134 508 260 18 2 473 9 452 1.17e-44 162
MS.gene017045.t1 MTR_4g485590 31.944 432 224 17 6 416 10 392 1.97e-44 161
MS.gene017045.t1 MTR_1g019520 39.450 218 115 3 257 468 2 208 2.27e-44 155
MS.gene017045.t1 MTR_5g045960 26.796 515 305 19 2 475 6 489 3.18e-44 162
MS.gene017045.t1 MTR_8g012630 39.906 213 114 5 259 465 204 408 3.87e-44 160
MS.gene017045.t1 MTR_1g107350 27.200 500 295 14 4 472 7 468 4.05e-44 162
MS.gene017045.t1 MTR_6g035185 26.923 494 315 18 2 470 8 480 4.29e-44 162
MS.gene017045.t1 MTR_6g035265 26.575 508 298 20 1 470 1 471 5.19e-44 161
MS.gene017045.t1 MTR_1g032490 29.177 401 235 13 90 472 101 470 5.51e-44 161
MS.gene017045.t1 MTR_2g035020 28.429 503 291 20 4 470 10 479 6.80e-44 161
MS.gene017045.t1 MTR_3g049970 25.553 497 311 15 4 476 8 469 1.23e-43 160
MS.gene017045.t1 MTR_2g098430 29.221 462 271 19 2 431 3 440 1.46e-43 160
MS.gene017045.t1 MTR_7g102520 26.087 506 305 16 7 473 14 489 1.69e-43 160
MS.gene017045.t1 MTR_3g479470 28.880 509 289 20 2 474 10 481 1.77e-43 160
MS.gene017045.t1 MTR_6g014220 25.545 505 310 14 2 473 7 478 3.57e-43 159
MS.gene017045.t1 MTR_5g072810 25.833 480 308 13 4 472 11 453 4.33e-43 158
MS.gene017045.t1 MTR_4g117950 28.514 498 295 18 2 474 3 464 6.43e-43 158
MS.gene017045.t1 MTR_7g070860 26.707 498 295 17 2 470 4 460 6.88e-43 158
MS.gene017045.t1 MTR_0891s0010 32.039 309 169 7 183 475 9 292 8.61e-43 153
MS.gene017045.t1 MTR_4g082820 28.099 484 301 18 4 469 6 460 1.24e-42 157
MS.gene017045.t1 MTR_4g485620 30.709 381 216 13 111 470 99 452 2.01e-42 157
MS.gene017045.t1 MTR_7g070940 27.510 498 299 18 2 470 6 470 2.20e-42 157
MS.gene017045.t1 MTR_2g034990 26.305 498 312 17 2 470 8 479 2.30e-42 157
MS.gene017045.t1 MTR_7g070660 26.908 498 305 20 3 470 9 477 2.95e-42 157
MS.gene017045.t1 MTR_7g117405 27.545 501 300 20 7 475 14 483 3.77e-42 156
MS.gene017045.t1 MTR_7g102560 26.654 514 300 19 3 474 7 485 3.99e-42 156
MS.gene017045.t1 MTR_5g016660 27.342 523 274 21 3 469 8 480 4.65e-42 156
MS.gene017045.t1 MTR_5g067170 26.453 499 308 16 2 470 8 477 5.08e-42 156
MS.gene017045.t1 MTR_7g080950 26.547 501 284 17 3 474 4 449 6.37e-42 155
MS.gene017045.t1 MTR_7g070810 27.879 495 304 18 2 470 6 473 7.22e-42 155
MS.gene017045.t1 MTR_7g070800 27.108 498 305 18 3 470 4 473 7.93e-42 155
MS.gene017045.t1 MTR_5g040030 27.146 501 305 19 2 469 11 484 1.30e-41 155
MS.gene017045.t1 MTR_1g107365 26.263 495 292 15 4 472 44 491 1.74e-41 155
MS.gene017045.t1 MTR_3g008010 25.000 512 302 16 3 473 8 478 3.02e-41 154
MS.gene017045.t1 MTR_6g014290 24.419 516 302 14 2 473 7 478 3.27e-41 154
MS.gene017045.t1 MTR_4g108250 27.692 520 281 21 3 470 9 485 3.53e-41 154
MS.gene017045.t1 MTR_5g035560 26.962 497 284 14 4 474 10 453 3.82e-41 154
MS.gene017045.t1 MTR_0536s0010 27.419 496 294 21 2 470 18 474 7.34e-41 153
MS.gene017045.t1 MTR_1g107375 24.138 493 304 13 4 472 7 453 7.43e-41 152
MS.gene017045.t1 MTR_6g014250 24.458 507 313 14 2 473 7 478 8.17e-41 152
MS.gene017045.t1 MTR_7g070910 26.523 509 298 19 3 470 9 482 9.37e-41 152
MS.gene017045.t1 MTR_7g070740 27.290 513 288 20 3 470 9 481 1.31e-40 152
MS.gene017045.t1 MTR_8g064880 27.093 454 274 14 4 430 8 431 1.45e-40 152
MS.gene017045.t1 MTR_0009s0240 28.571 490 288 20 3 469 5 455 1.65e-40 151
MS.gene017045.t1 MTR_4g485640 28.660 485 276 19 15 469 219 663 2.51e-40 154
MS.gene017045.t1 MTR_8g466240 28.745 494 276 20 3 469 6 450 2.62e-40 150
MS.gene017045.t1 MTR_1g107380 27.056 377 237 8 109 473 123 473 2.71e-40 151
MS.gene017045.t1 MTR_0288s0020 25.200 500 301 17 2 473 7 461 3.33e-40 150
MS.gene017045.t1 MTR_7g070780 27.490 502 299 18 4 470 10 481 3.68e-40 151
MS.gene017045.t1 MTR_6g014270 25.869 518 294 15 3 473 5 479 4.19e-40 150
MS.gene017045.t1 MTR_3g479610 32.979 282 150 7 206 474 59 314 4.20e-40 147
MS.gene017045.t1 MTR_6g013440 25.838 507 308 16 2 473 8 481 4.40e-40 150
MS.gene017045.t1 MTR_1g107315 26.770 452 268 13 6 430 9 424 6.44e-40 150
MS.gene017045.t1 MTR_4g064987 28.184 479 292 18 5 473 8 444 7.68e-40 149
MS.gene017045.t1 MTR_7g070610 26.931 505 301 22 3 470 11 484 7.74e-40 150
MS.gene017045.t1 MTR_7g070930 26.243 503 307 15 3 470 12 485 8.77e-40 150
MS.gene017045.t1 MTR_5g075440 25.873 487 307 13 4 474 9 457 1.09e-39 149
MS.gene017045.t1 MTR_8g059425 24.902 510 307 18 2 473 7 478 2.94e-39 148
MS.gene017045.t1 MTR_6g035295 26.575 508 296 19 4 470 11 482 3.63e-39 148
MS.gene017045.t1 MTR_7g055710 26.233 507 301 18 3 470 9 481 3.85e-39 148
MS.gene017045.t1 MTR_6g014187 25.838 507 308 19 2 473 7 480 5.85e-39 147
MS.gene017045.t1 MTR_2g035040 27.807 374 219 16 123 470 36 384 7.37e-39 145
MS.gene017045.t1 MTR_6g038300 27.021 433 243 12 6 410 12 399 8.98e-39 146
MS.gene017045.t1 MTR_6g078320 27.143 490 308 21 6 470 12 477 1.07e-38 147
MS.gene017045.t1 MTR_6g014020 25.247 507 311 18 2 473 7 480 1.08e-38 147
MS.gene017045.t1 MTR_5g072840 25.988 481 303 11 4 472 9 448 1.12e-38 146
MS.gene017045.t1 MTR_8g071070 27.000 500 299 19 3 472 5 468 1.30e-38 146
MS.gene017045.t1 MTR_6g014040 24.951 509 311 19 2 473 7 481 1.47e-38 146
MS.gene017045.t1 MTR_5g072830 24.740 481 309 11 4 472 9 448 2.43e-38 145
MS.gene017045.t1 MTR_4g064987 27.743 483 295 18 5 473 8 450 3.86e-38 145
MS.gene017045.t1 MTR_6g038220 26.518 494 262 19 6 461 12 442 4.19e-38 144
MS.gene017045.t1 MTR_1g029540 25.988 481 298 18 10 472 19 459 4.23e-38 145
MS.gene017045.t1 MTR_6g038200 24.694 490 277 15 6 461 12 443 4.39e-38 144
MS.gene017045.t1 MTR_6g013960 25.540 509 307 17 2 473 7 480 6.28e-38 144
MS.gene017045.t1 MTR_8g083290 25.904 498 301 15 6 473 5 464 6.85e-38 144
MS.gene017045.t1 MTR_5g087620 28.889 495 271 20 2 453 7 463 7.01e-38 145
MS.gene017045.t1 MTR_6g014050 25.773 388 238 9 108 473 122 481 7.48e-38 144
MS.gene017045.t1 MTR_6g038230 26.087 483 279 14 6 461 12 443 7.54e-38 144
MS.gene017045.t1 MTR_7g080900 25.514 486 304 15 2 470 9 453 1.22e-37 143
MS.gene017045.t1 MTR_5g072860 26.122 490 300 12 6 474 19 467 1.30e-37 144
MS.gene017045.t1 MTR_7g013200 23.840 474 314 14 7 473 7 440 1.80e-37 142
MS.gene017045.t1 MTR_6g014170 25.000 492 313 14 2 473 7 462 2.07e-37 143
MS.gene017045.t1 MTR_6g013450 24.904 522 293 17 3 473 8 481 5.85e-37 142
MS.gene017045.t1 MTR_4g008630 34.855 241 140 9 237 472 234 462 6.96e-37 141
MS.gene017045.t1 MTR_5g072820 25.988 481 303 12 4 472 9 448 8.80e-37 141
MS.gene017045.t1 MTR_2g008210 24.603 504 314 15 2 473 8 477 1.55e-36 140
MS.gene017045.t1 MTR_5g031830 26.337 505 287 16 6 472 13 470 1.77e-36 140
MS.gene017045.t1 MTR_3g084540 25.200 500 306 18 7 472 8 473 2.63e-36 140
MS.gene017045.t1 MTR_1g040310 27.364 497 302 20 4 470 14 481 3.08e-36 140
MS.gene017045.t1 MTR_7g013220 25.826 484 299 20 7 471 7 449 4.11e-36 139
MS.gene017045.t1 MTR_7g080935 26.291 426 258 14 3 410 9 396 4.71e-36 139
MS.gene017045.t1 MTR_5g039900 26.969 508 290 22 4 469 12 480 4.78e-36 139
MS.gene017045.t1 MTR_7g080940 25.268 467 285 16 3 452 9 428 5.11e-36 139
MS.gene017045.t1 MTR_5g031840 26.400 500 301 18 1 472 1 461 7.55e-36 139
MS.gene017045.t1 MTR_3g031450 25.523 478 284 12 5 463 18 442 1.03e-35 138
MS.gene017045.t1 MTR_7g011470 23.679 511 300 16 2 473 7 466 1.55e-35 138
MS.gene017045.t1 MTR_5g016480 26.781 407 255 13 82 473 93 471 1.64e-35 138
MS.gene017045.t1 MTR_4g082810 31.673 281 167 8 124 392 125 392 1.96e-35 136
MS.gene017045.t1 MTR_8g032950 25.749 501 309 18 2 470 9 478 2.07e-35 137
MS.gene017045.t1 MTR_6g014310 25.701 428 257 15 77 473 84 481 3.14e-35 137
MS.gene017045.t1 MTR_7g070870 31.949 313 168 9 168 470 179 456 4.42e-35 136
MS.gene017045.t1 MTR_3g009490 36.649 191 109 5 285 470 3 186 5.78e-35 129
MS.gene017045.t1 MTR_6g014300 25.889 506 293 18 2 473 9 466 8.40e-35 135
MS.gene017045.t1 MTR_3g031400 25.361 485 294 14 5 473 18 450 9.09e-35 135
MS.gene017045.t1 MTR_6g013990 24.272 515 304 18 2 473 7 478 1.15e-34 135
MS.gene017045.t1 MTR_7g011470 23.288 511 298 15 2 473 7 462 1.23e-34 135
MS.gene017045.t1 MTR_6g014200 25.234 428 259 15 77 473 80 477 1.30e-34 135
MS.gene017045.t1 MTR_6g013900 24.884 430 262 13 75 473 80 479 1.78e-34 135
MS.gene017045.t1 MTR_7g013180 22.899 476 313 17 9 471 9 443 1.98e-34 134
MS.gene017045.t1 MTR_7g013240 24.370 476 300 14 9 471 10 438 3.53e-34 133
MS.gene017045.t1 MTR_8g009840 37.885 227 125 7 250 468 303 521 5.28e-34 134
MS.gene017045.t1 MTR_6g014150 24.272 515 306 17 2 473 4 477 5.35e-34 134
MS.gene017045.t1 MTR_3g084530 24.291 494 317 15 7 472 8 472 5.49e-34 133
MS.gene017045.t1 MTR_5g058320 24.649 499 307 16 3 473 8 465 5.94e-34 133
MS.gene017045.t1 MTR_2g059240 27.532 385 233 11 105 473 115 469 6.26e-34 133
MS.gene017045.t1 MTR_4g128690 25.432 405 260 10 74 472 84 452 6.84e-34 133
MS.gene017045.t1 MTR_8g044140 28.462 390 218 12 112 470 87 446 7.04e-34 133
MS.gene017045.t1 MTR_8g083280 23.434 495 314 12 5 473 7 462 9.61e-34 133
MS.gene017045.t1 MTR_6g011340 23.745 518 305 18 2 473 7 480 1.21e-33 132
MS.gene017045.t1 MTR_5g031860 26.931 505 283 19 6 472 13 469 1.40e-33 132
MS.gene017045.t1 MTR_6g013920 24.802 504 314 17 3 473 8 479 4.19e-33 131
MS.gene017045.t1 MTR_8g043470 32.093 215 120 4 257 469 184 374 7.62e-32 126
MS.gene017045.t1 MTR_0078s0200 29.154 319 199 10 2 307 3 307 1.30e-31 124
MS.gene017045.t1 MTR_7g013260 22.965 479 308 16 7 471 8 439 1.51e-31 126
MS.gene017045.t1 MTR_8g088560 25.358 489 301 16 4 470 9 455 1.56e-31 126
MS.gene017045.t1 MTR_2086s0010 34.359 195 103 3 283 475 3 174 2.23e-31 119
MS.gene017045.t1 MTR_1996s0010 34.359 195 103 3 283 475 3 174 2.23e-31 119
MS.gene017045.t1 MTR_5g004940 27.961 304 160 8 171 472 131 377 3.14e-31 124
MS.gene017045.t1 MTR_0477s0010 31.193 218 124 3 258 473 124 317 6.44e-31 122
MS.gene017045.t1 MTR_7g470610 28.523 298 164 8 122 405 7 269 8.63e-31 121
MS.gene017045.t1 MTR_7g070583 28.523 298 164 8 122 405 7 269 8.63e-31 121
MS.gene017045.t1 MTR_8g090095 34.361 227 118 9 259 472 271 479 1.42e-30 124
MS.gene017045.t1 MTR_7g039550 34.091 220 126 6 256 469 52 258 1.48e-30 120
MS.gene017045.t1 MTR_6g014240 24.000 500 288 15 2 469 4 443 4.43e-30 122
MS.gene017045.t1 MTR_8g007585 30.137 219 127 3 257 473 198 392 2.30e-29 119
MS.gene017045.t1 MTR_8g007565 26.793 474 276 16 4 446 6 439 2.30e-29 120
MS.gene017045.t1 MTR_6g014190 28.400 250 143 5 236 473 62 287 2.41e-29 117
MS.gene017045.t1 MTR_2g008225 27.789 475 273 18 2 449 12 443 3.92e-29 119
MS.gene017045.t1 MTR_8g007650 26.793 474 276 16 4 446 6 439 5.16e-29 119
MS.gene017045.t1 MTR_7g071050 25.105 474 272 16 3 455 11 422 1.08e-28 118
MS.gene017045.t1 MTR_3g084520 23.108 489 307 16 7 461 8 461 1.12e-28 118
MS.gene017045.t1 MTR_5g098960 25.216 464 291 16 1 450 3 424 2.30e-28 117
MS.gene017045.t1 MTR_5g027210 29.278 263 153 8 208 450 212 461 1.21e-27 115
MS.gene017045.t1 MTR_5g066410 26.824 466 263 18 8 446 1 415 1.30e-27 115
MS.gene017045.t1 MTR_2g008220 26.471 476 278 19 2 449 11 442 3.98e-27 114
MS.gene017045.t1 MTR_8g068330 27.129 505 285 22 2 472 5 460 1.37e-26 112
MS.gene017045.t1 MTR_4g123553 34.109 258 137 11 200 449 206 438 1.67e-26 112
MS.gene017045.t1 MTR_8g068340 25.255 491 312 18 2 472 9 464 1.26e-25 109
MS.gene017045.t1 MTR_4g128720 22.699 489 317 14 1 472 11 455 1.27e-25 109
MS.gene017045.t1 MTR_7g070760 33.778 225 95 6 192 405 20 201 2.74e-25 103
MS.gene017045.t1 MTR_2g008226 30.952 252 143 9 205 450 222 448 3.14e-25 108
MS.gene017045.t1 MTR_2g046620 31.538 260 145 10 198 449 205 439 5.59e-25 107
MS.gene017045.t1 MTR_5g072850 26.582 395 201 15 5 392 10 322 6.92e-25 106
MS.gene017045.t1 MTR_8g056740 27.500 400 199 15 43 428 1 323 8.24e-24 103
MS.gene017045.t1 MTR_7g070995 40.602 133 69 2 345 470 13 142 1.44e-23 97.1
MS.gene017045.t1 MTR_8g006230 28.631 241 153 9 83 314 26 256 2.91e-23 99.8
MS.gene017045.t1 MTR_8g068360 29.020 255 156 9 199 449 211 444 8.76e-23 101
MS.gene017045.t1 MTR_5g066390 32.215 149 87 2 327 473 79 215 1.06e-22 96.7
MS.gene017045.t1 MTR_6g014185 26.619 278 138 8 206 473 124 345 1.12e-22 99.8
MS.gene017045.t1 MTR_2g014900 24.486 486 309 16 5 472 7 452 2.17e-22 100
MS.gene017045.t1 MTR_0536s0030 36.424 151 87 6 328 470 200 349 2.85e-22 98.6
MS.gene017045.t1 MTR_6g014160 27.187 320 162 14 108 405 103 373 2.86e-22 99.0
MS.gene017045.t1 MTR_3g009500 32.197 264 163 10 1 252 1 260 6.50e-22 95.5
MS.gene017045.t1 MTR_7g067120 23.909 481 295 16 2 472 6 425 2.48e-21 96.7
MS.gene017045.t1 MTR_4g077960 32.589 224 121 9 234 449 214 415 3.43e-21 96.3
MS.gene017045.t1 MTR_6g036650 33.772 228 126 8 250 474 268 473 7.68e-21 95.5
MS.gene017045.t1 MTR_6g014000 31.818 154 85 5 324 474 21 157 9.64e-21 95.1
MS.gene017045.t1 MTR_6g042310 23.518 506 302 19 1 474 14 466 1.06e-20 95.1
MS.gene017045.t1 MTR_3g435310 32.683 205 113 7 248 449 215 397 2.34e-20 93.6
MS.gene017045.t1 MTR_4g079250 26.370 292 173 8 181 465 191 447 1.01e-19 92.0
MS.gene017045.t1 MTR_3g009520 29.412 255 155 11 6 243 7 253 2.77e-19 87.8
MS.gene017045.t1 MTR_4g079270 25.685 292 175 8 181 465 191 447 3.81e-19 90.1
MS.gene017045.t1 MTR_7g067330 23.029 482 298 17 2 472 6 425 7.19e-19 89.0
MS.gene017045.t1 MTR_1g090270 25.806 279 174 8 191 457 189 446 1.71e-17 85.1
MS.gene017045.t1 MTR_2g083430 24.870 386 218 12 108 456 88 438 2.21e-17 84.7
MS.gene017045.t1 MTR_1g107325 31.250 160 100 4 304 461 190 341 3.36e-17 83.6
MS.gene017045.t1 MTR_4g059370 26.332 319 193 10 168 469 92 385 8.66e-17 82.4
MS.gene017045.t1 MTR_2g083480 26.230 244 157 6 233 474 234 456 4.73e-16 80.9
MS.gene017045.t1 MTR_5g090680 83.333 42 7 0 1 42 1 42 9.64e-16 73.6
MS.gene017045.t1 MTR_5g090590 64.815 54 19 0 401 454 1 54 1.31e-15 71.6
MS.gene017045.t1 MTR_6g014186 21.200 500 302 14 2 473 4 439 1.45e-14 75.9
MS.gene017045.t1 MTR_2g083380 27.203 261 156 8 202 456 223 455 2.49e-13 72.4
MS.gene017045.t1 MTR_6g052375 29.101 189 105 6 170 350 27 194 4.04e-13 70.5
MS.gene017045.t1 MTR_2g083420 25.194 258 132 8 201 456 216 414 3.70e-12 68.6
MS.gene017045.t1 MTR_0475s0030 46.552 58 31 0 355 412 11 68 9.28e-12 62.0
MS.gene017045.t1 MTR_1g090280 24.084 191 130 3 283 472 135 311 1.21e-11 66.2
MS.gene017045.t1 MTR_6g005660 26.122 245 168 7 3 241 4 241 1.77e-11 64.7
MS.gene017045.t1 MTR_2g009740 31.633 98 51 1 254 351 197 278 3.36e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017045.t1 AT3G21760 44.262 488 253 9 3 476 2 484 1.25e-135 400
MS.gene017045.t1 AT3G21750 41.942 484 258 9 3 476 2 472 5.02e-135 398
MS.gene017045.t1 AT3G21790 42.623 488 259 10 3 476 2 482 1.80e-132 392
MS.gene017045.t1 AT4G15280 42.412 481 265 8 3 476 2 477 3.87e-131 388
MS.gene017045.t1 AT4G15280 42.412 481 265 8 3 476 34 509 1.15e-130 388
MS.gene017045.t1 AT3G21800 42.443 483 253 9 1 469 1 472 1.42e-128 382
MS.gene017045.t1 AT3G21780 41.042 480 268 9 3 476 2 472 3.03e-123 368
MS.gene017045.t1 AT1G07250 41.736 484 251 11 1 469 2 469 8.84e-123 367
MS.gene017045.t1 AT2G29730 41.286 482 247 12 1 469 1 459 1.97e-115 348
MS.gene017045.t1 AT1G07240 40.326 491 260 11 1 473 1 476 1.79e-113 343
MS.gene017045.t1 AT2G29740 41.068 487 250 16 2 470 5 472 3.93e-112 339
MS.gene017045.t1 AT1G07260 39.014 487 263 13 3 473 4 472 4.27e-112 339
MS.gene017045.t1 AT4G15260 43.681 364 196 5 116 476 1 358 2.23e-109 328
MS.gene017045.t1 AT2G29710 39.712 486 249 13 1 469 1 459 1.01e-100 310
MS.gene017045.t1 AT2G29750 39.959 493 244 18 5 470 8 475 6.93e-99 306
MS.gene017045.t1 AT3G16520 34.292 487 273 17 1 470 1 457 5.30e-80 256
MS.gene017045.t1 AT3G16520 33.966 474 266 17 1 457 1 444 2.78e-76 246
MS.gene017045.t1 AT3G16520 36.407 423 231 14 1 406 1 402 3.69e-76 246
MS.gene017045.t1 AT4G01070 33.333 474 288 15 2 465 5 460 3.02e-73 239
MS.gene017045.t1 AT1G01420 34.454 476 277 18 6 468 9 462 1.43e-69 229
MS.gene017045.t1 AT1G01420 34.454 476 277 18 6 468 12 465 1.80e-69 229
MS.gene017045.t1 AT1G01390 35.663 415 237 16 5 405 25 423 1.17e-67 225
MS.gene017045.t1 AT1G01390 35.663 415 237 16 5 405 8 406 1.20e-67 224
MS.gene017045.t1 AT4G36770 32.684 462 275 15 8 455 7 446 1.43e-66 221
MS.gene017045.t1 AT5G66690 31.992 472 265 21 12 459 14 453 2.76e-66 221
MS.gene017045.t1 AT5G26310 32.083 480 273 21 12 468 14 463 9.77e-66 219
MS.gene017045.t1 AT2G18570 32.083 480 290 17 1 465 1 459 2.61e-64 215
MS.gene017045.t1 AT3G50740 30.723 498 296 19 1 474 3 475 6.49e-63 212
MS.gene017045.t1 AT2G18560 33.077 390 230 12 86 465 1 369 3.20e-54 186
MS.gene017045.t1 AT2G36760 28.486 502 302 17 7 476 16 492 4.37e-53 186
MS.gene017045.t1 AT2G36780 27.711 498 307 17 7 474 16 490 9.99e-53 185
MS.gene017045.t1 AT2G36750 28.024 496 307 14 7 474 12 485 4.92e-52 183
MS.gene017045.t1 AT2G15480 28.685 502 299 17 2 472 7 480 5.89e-52 183
MS.gene017045.t1 AT2G15480 28.320 512 298 17 2 472 7 490 6.89e-52 183
MS.gene017045.t1 AT5G12890 29.741 501 298 19 2 473 7 482 2.88e-51 181
MS.gene017045.t1 AT2G36770 25.703 498 321 16 7 476 16 492 1.49e-49 177
MS.gene017045.t1 AT1G22400 28.571 476 274 19 2 446 10 450 1.40e-48 174
MS.gene017045.t1 AT2G36800 27.778 504 300 21 7 474 14 489 2.21e-48 174
MS.gene017045.t1 AT2G15490 27.600 500 307 15 2 472 4 477 2.37e-48 173
MS.gene017045.t1 AT2G15490 27.600 500 310 15 2 472 4 480 8.48e-48 172
MS.gene017045.t1 AT3G46660 28.216 482 290 18 6 472 15 455 2.33e-47 170
MS.gene017045.t1 AT1G22380 27.613 507 297 18 2 473 10 481 2.46e-47 171
MS.gene017045.t1 AT1G78270 29.151 518 275 21 2 473 10 481 4.45e-47 170
MS.gene017045.t1 AT5G59590 27.629 485 293 18 1 470 6 447 1.65e-46 167
MS.gene017045.t1 AT5G59580 27.423 485 293 19 3 472 7 447 4.19e-46 166
MS.gene017045.t1 AT4G34138 27.416 507 294 21 3 472 9 478 4.66e-46 167
MS.gene017045.t1 AT4G34131 28.827 503 292 19 2 470 7 477 1.50e-45 166
MS.gene017045.t1 AT3G53160 27.866 506 298 16 7 475 10 485 2.51e-45 165
MS.gene017045.t1 AT1G22340 27.992 518 286 18 2 475 10 484 3.65e-45 164
MS.gene017045.t1 AT3G46690 28.074 488 298 18 1 475 5 452 4.55e-45 164
MS.gene017045.t1 AT3G46670 26.763 482 295 18 6 472 10 448 4.79e-45 164
MS.gene017045.t1 AT2G36790 27.888 502 301 19 7 474 15 489 7.56e-45 164
MS.gene017045.t1 AT1G22360 26.511 513 295 15 2 473 7 478 1.04e-44 163
MS.gene017045.t1 AT3G46700 27.126 494 290 16 1 475 5 447 4.85e-44 160
MS.gene017045.t1 AT5G38010 29.388 490 284 19 2 472 7 453 1.86e-43 159
MS.gene017045.t1 AT1G22360 27.527 465 269 13 2 428 7 441 5.47e-43 158
MS.gene017045.t1 AT3G55700 27.515 487 298 17 2 473 5 451 1.12e-42 157
MS.gene017045.t1 AT3G55710 27.935 494 291 15 2 473 5 455 1.85e-42 157
MS.gene017045.t1 AT5G38040 27.932 469 286 16 13 469 18 446 2.66e-42 156
MS.gene017045.t1 AT3G46650 27.083 480 287 15 3 473 8 433 6.43e-42 155
MS.gene017045.t1 AT1G22370 29.452 438 251 17 2 408 10 420 1.02e-41 155
MS.gene017045.t1 AT2G31790 28.926 484 277 15 2 461 5 445 1.22e-41 154
MS.gene017045.t1 AT2G30150 28.145 469 283 16 6 461 14 441 2.77e-41 153
MS.gene017045.t1 AT4G34135 27.447 470 268 15 2 434 8 441 3.85e-41 154
MS.gene017045.t1 AT4G15500 25.791 411 256 10 81 473 84 463 4.18e-41 153
MS.gene017045.t1 AT3G46680 26.611 481 306 16 2 472 6 449 5.30e-41 152
MS.gene017045.t1 AT3G11340 28.131 487 281 17 6 473 9 445 5.72e-41 152
MS.gene017045.t1 AT3G53150 26.592 534 294 21 2 476 19 513 1.30e-40 152
MS.gene017045.t1 AT2G30150 27.897 466 282 16 9 461 1 425 1.55e-40 151
MS.gene017045.t1 AT2G16890 27.108 498 296 16 6 476 10 467 2.71e-40 151
MS.gene017045.t1 AT1G05680 26.261 476 290 14 6 461 7 441 4.98e-40 150
MS.gene017045.t1 AT5G05880 26.955 486 294 13 4 472 7 448 5.95e-40 150
MS.gene017045.t1 AT4G01070 30.595 353 227 12 2 347 5 346 9.09e-40 147
MS.gene017045.t1 AT2G31750 25.400 500 296 18 3 474 6 456 3.24e-39 148
MS.gene017045.t1 AT2G31750 25.299 502 298 18 3 476 6 458 3.57e-39 148
MS.gene017045.t1 AT5G14860 28.350 515 271 21 7 472 10 475 3.98e-39 148
MS.gene017045.t1 AT1G05675 26.403 481 283 15 6 461 7 441 4.08e-39 147
MS.gene017045.t1 AT1G73880 27.310 487 307 16 3 473 12 467 4.37e-39 147
MS.gene017045.t1 AT4G15490 26.253 499 305 16 2 473 5 467 6.74e-39 147
MS.gene017045.t1 AT4G15550 25.051 495 308 15 7 473 15 474 2.91e-38 145
MS.gene017045.t1 AT3G02100 25.755 497 306 13 1 476 9 463 9.16e-38 144
MS.gene017045.t1 AT5G05870 26.971 482 303 17 5 472 8 454 1.22e-37 144
MS.gene017045.t1 AT5G03490 27.902 491 284 18 2 469 16 459 1.29e-37 143
MS.gene017045.t1 AT1G51210 27.015 459 277 14 3 447 18 432 1.50e-37 142
MS.gene017045.t1 AT1G24100 25.963 493 299 15 3 472 9 458 1.73e-37 143
MS.gene017045.t1 AT2G30140 25.208 480 308 15 6 474 14 453 2.12e-37 142
MS.gene017045.t1 AT2G43820 26.465 495 288 19 2 472 4 446 2.13e-37 142
MS.gene017045.t1 AT2G30140 25.367 477 310 15 6 474 14 452 2.31e-37 142
MS.gene017045.t1 AT4G14090 25.911 494 291 17 2 470 10 453 1.22e-36 140
MS.gene017045.t1 AT4G15480 28.919 370 227 11 104 461 122 467 1.57e-36 141
MS.gene017045.t1 AT2G43840 26.104 498 278 20 6 472 8 446 1.60e-36 140
MS.gene017045.t1 AT3G21560 26.772 508 283 22 6 472 13 472 1.71e-36 141
MS.gene017045.t1 AT2G43840 25.904 498 279 20 6 472 8 446 7.00e-36 138
MS.gene017045.t1 AT2G23260 26.899 487 300 14 2 472 7 453 9.96e-36 138
MS.gene017045.t1 AT2G16890 26.932 427 257 12 6 408 10 405 2.23e-35 136
MS.gene017045.t1 AT2G23250 30.000 360 211 12 124 472 106 435 6.18e-35 135
MS.gene017045.t1 AT5G05890 26.749 486 299 17 4 472 7 452 7.35e-35 135
MS.gene017045.t1 AT2G36970 23.353 501 325 14 2 476 7 474 3.04e-34 134
MS.gene017045.t1 AT5G17050 26.895 409 250 10 78 474 87 458 1.66e-33 132
MS.gene017045.t1 AT4G15270 31.120 241 156 5 3 233 2 242 3.15e-33 128
MS.gene017045.t1 AT4G15270 33.014 209 134 4 3 205 2 210 3.28e-33 126
MS.gene017045.t1 AT5G05900 26.749 486 298 18 4 474 7 449 1.09e-32 129
MS.gene017045.t1 AT1G22370 33.725 255 134 9 171 408 14 250 1.32e-32 126
MS.gene017045.t1 AT1G05560 24.897 486 310 15 7 475 7 454 1.61e-32 129
MS.gene017045.t1 AT5G17030 26.503 449 283 12 40 474 42 457 2.63e-32 129
MS.gene017045.t1 AT1G05560 24.691 486 311 15 7 475 57 504 3.53e-32 129
MS.gene017045.t1 AT2G28080 24.699 498 301 14 9 476 22 475 4.66e-32 128
MS.gene017045.t1 AT3G46720 26.176 489 295 19 2 475 6 443 7.56e-32 127
MS.gene017045.t1 AT4G15270 35.106 188 116 4 3 184 2 189 1.44e-31 121
MS.gene017045.t1 AT1G10400 26.130 509 286 19 1 470 3 460 1.73e-31 126
MS.gene017045.t1 AT5G05860 31.502 273 158 8 205 473 201 448 1.89e-31 126
MS.gene017045.t1 AT1G06000 26.923 494 265 19 2 469 7 430 4.05e-31 125
MS.gene017045.t1 AT5G37950 31.690 284 161 8 104 379 78 336 3.02e-30 120
MS.gene017045.t1 AT5G37950 31.579 285 166 9 104 379 78 342 3.61e-30 120
MS.gene017045.t1 AT5G17040 25.720 486 294 15 4 473 6 440 2.09e-29 120
MS.gene017045.t1 AT1G05530 25.462 487 293 19 1 461 1 443 6.14e-29 119
MS.gene017045.t1 AT1G30530 26.542 373 232 10 109 473 113 451 1.12e-27 115
MS.gene017045.t1 AT2G26480 25.963 493 301 17 1 476 4 449 1.19e-26 112
MS.gene017045.t1 AT3G22250 25.203 492 300 19 2 465 5 456 1.29e-26 112
MS.gene017045.t1 AT5G54010 24.593 492 297 18 3 472 4 443 1.62e-26 112
MS.gene017045.t1 AT1G64910 25.826 484 281 18 10 472 11 437 1.80e-26 112
MS.gene017045.t1 AT5G17040 28.428 299 174 6 184 473 71 338 3.10e-26 109
MS.gene017045.t1 AT5G49690 31.395 258 138 10 199 449 207 432 1.10e-25 109
MS.gene017045.t1 AT3G29630 23.770 488 311 14 3 476 4 444 1.37e-25 109
MS.gene017045.t1 AT5G65550 23.913 460 278 15 3 434 7 422 1.09e-24 107
MS.gene017045.t1 AT5G53990 27.778 288 179 8 192 476 180 441 1.40e-24 106
MS.gene017045.t1 AT4G27560 29.520 271 166 6 203 472 197 443 4.42e-24 105
MS.gene017045.t1 AT2G22930 24.682 393 253 10 97 470 67 435 4.64e-24 104
MS.gene017045.t1 AT3G29630 23.819 487 286 15 3 476 4 418 4.77e-24 104
MS.gene017045.t1 AT1G50580 28.617 311 189 7 177 476 154 442 1.09e-23 103
MS.gene017045.t1 AT4G27570 27.675 271 171 6 203 472 197 443 5.63e-23 101
MS.gene017045.t1 AT2G22590 25.152 493 263 18 3 448 13 446 7.39e-23 101
MS.gene017045.t1 AT1G64920 27.778 288 175 8 192 472 180 441 2.00e-22 100
MS.gene017045.t1 AT4G09500 24.224 483 300 18 3 470 4 435 2.36e-22 99.8
MS.gene017045.t1 AT5G54060 26.970 330 198 13 154 468 157 458 5.79e-21 95.9
MS.gene017045.t1 AT4G09500 23.319 476 288 15 3 470 4 410 1.14e-19 91.7
MS.gene017045.t1 AT4G34135 24.118 340 203 11 2 306 8 327 1.20e-14 75.5

Find 147 sgRNAs with CRISPR-Local

Find 161 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCTGGGTGGGCTAGTATT+TGG 0.174492 5.1:+72087111 None:intergenic
ATCAACGGTGCCCTCGGTTT+TGG 0.183245 5.1:+72087418 None:intergenic
TATGGGTCCTACTGGATATA+TGG 0.222720 5.1:+72087454 None:intergenic
GGCTGGGTGGGCTAGTATTT+GGG 0.224545 5.1:+72087112 None:intergenic
TTTGGGCTCTAGGTTTAATA+TGG 0.235515 5.1:+72087436 None:intergenic
GGGCTAGTATTTGGGCTTGT+GGG 0.237440 5.1:+72087120 None:intergenic
TGATTACCCTCTTTCTGATT+TGG 0.258101 5.1:-72087207 MS.gene017045:CDS
ACACTCGAGAGCATATATTT+TGG 0.279632 5.1:-72087053 MS.gene017045:CDS
CGCAGGGATGGAAAATTCTT+TGG 0.285582 5.1:+72087784 None:intergenic
TGGATAAAGATGGAGATTTC+AGG 0.303634 5.1:-72086857 MS.gene017045:CDS
TTTCGATGAGGATCAGATTA+AGG 0.308450 5.1:-72087318 MS.gene017045:CDS
TAGTTCAGGATGAGAGAAAA+AGG 0.337088 5.1:+72087487 None:intergenic
CCCTCTTTCTGATTTGGATT+CGG 0.338208 5.1:-72087201 MS.gene017045:CDS
TTCTCTCATCCTGAACTAGA+TGG 0.343917 5.1:-72087482 MS.gene017045:CDS
TTCCTTGCGTAGCACTGAAC+TGG 0.348096 5.1:+72087607 None:intergenic
GCAAGCTTGGTGCCCTTCGG+TGG 0.350536 5.1:+72087236 None:intergenic
ATCAGCATTCTTGAGGCCTT+TGG 0.355799 5.1:+72087559 None:intergenic
TGGGCTAGTATTTGGGCTTG+TGG 0.359798 5.1:+72087119 None:intergenic
AGTAAGAAGACTTTGTTAGA+AGG 0.360947 5.1:-72086807 MS.gene017045:CDS
ACAGAGATAGGAAGGGTAAT+TGG 0.362751 5.1:-72087149 MS.gene017045:CDS
TTGGGCTCTAGGTTTAATAT+GGG 0.391165 5.1:+72087437 None:intergenic
TCATGACCAAGACAGTTATT+CGG 0.391428 5.1:+72088056 None:intergenic
TTTCCTCTGCTTTGGGAGAA+GGG 0.395354 5.1:-72087345 MS.gene017045:CDS
GCATTTGCTATTGAGAATAG+TGG 0.398480 5.1:-72087290 MS.gene017045:CDS
ACCTCCGGCGTAGCTTTCCT+TGG 0.400042 5.1:-72087749 MS.gene017045:CDS
GTCCGGTCTAAGAACCCTTC+AGG 0.407829 5.1:+72087173 None:intergenic
CAAGCTTGGTGCCCTTCGGT+GGG 0.415764 5.1:+72087237 None:intergenic
TCCGCAGTTAAAAGAAAGTT+AGG 0.418649 5.1:+72086909 None:intergenic
GATGGCTGTGGAGATTTCAT+TGG 0.418889 5.1:-72086958 MS.gene017045:CDS
CGTTTGGTTTCTGAGCTTCA+AGG 0.419890 5.1:+72087903 None:intergenic
GTTCCCTCAACCTCTGATCC+AGG 0.429617 5.1:-72087944 MS.gene017045:CDS
GAGATGGCTTGTTTGACGTT+TGG 0.431788 5.1:+72087887 None:intergenic
GATTTGTTTCACACTGTGGC+TGG 0.436436 5.1:-72087082 MS.gene017045:CDS
AGCTTGGTGCCCTTCGGTGG+GGG 0.443386 5.1:+72087239 None:intergenic
ATGGGTACACCATCTAGTTC+AGG 0.443914 5.1:+72087473 None:intergenic
GCCATCTCCAACCTCACTAC+TGG 0.451900 5.1:-72087872 MS.gene017045:CDS
GGCTAGTATTTGGGCTTGTG+GGG 0.454944 5.1:+72087121 None:intergenic
TTTGGCGAAGCTCGTGAAGA+TGG 0.459828 5.1:+72087577 None:intergenic
GTTGAGGGAACAGAAACTTC+TGG 0.459954 5.1:+72087956 None:intergenic
CTCAACCTCTGATCCAGGTT+CGG 0.465298 5.1:-72087939 MS.gene017045:CDS
GGATCTTCCTACACTTACTT+AGG 0.466391 5.1:-72086783 MS.gene017045:CDS
GGGGCAAGCTTGGTGCCCTT+CGG 0.467485 5.1:+72087233 None:intergenic
TACCTGAAGGGTTCTTAGAC+CGG 0.467934 5.1:-72087175 MS.gene017045:CDS
CCCTTCCTATCTCTGTTGTC+CGG 0.469073 5.1:+72087156 None:intergenic
TTATTCGGAGGCGGTTATCA+TGG 0.471291 5.1:+72088071 None:intergenic
GAAACAAATCCTCCAGTGGC+TGG 0.473509 5.1:+72087095 None:intergenic
ATAAGATAGAGAGAGGAATA+CGG 0.474664 5.1:-72086887 MS.gene017045:CDS
AGGTTTAATATGGGTCCTAC+TGG 0.475145 5.1:+72087446 None:intergenic
CGGAGTGTGTTGGATAAAGA+TGG 0.476433 5.1:-72086867 MS.gene017045:CDS
AAAGAGCGGCCATGTGGCAA+TGG 0.479397 5.1:+72087025 None:intergenic
TCCAGTAGTGAGGTTGGAGA+TGG 0.479531 5.1:+72087871 None:intergenic
TTCCTCTGCTTTGGGAGAAG+GGG 0.482817 5.1:-72087344 MS.gene017045:CDS
ATGGGTCCTACTGGATATAT+GGG 0.483747 5.1:+72087455 None:intergenic
GCGTTTGTGTTCTTCACCTC+CGG 0.486166 5.1:-72087764 MS.gene017045:CDS
ATACTAGCCCACCCAGCCAC+TGG 0.489268 5.1:-72087107 MS.gene017045:CDS
AAGAGCGGCCATGTGGCAAT+GGG 0.489364 5.1:+72087026 None:intergenic
TCCTCTGCTTTGGGAGAAGG+GGG 0.490421 5.1:-72087343 MS.gene017045:CDS
CATTTGCTATTGAGAATAGT+GGG 0.493163 5.1:-72087289 MS.gene017045:CDS
GTAATCAGATGGGGCAAGCT+TGG 0.493460 5.1:+72087223 None:intergenic
GAGAGGAATACGGAGTGTGT+TGG 0.494496 5.1:-72086877 MS.gene017045:CDS
TTAGACCGGACAACAGAGAT+AGG 0.495862 5.1:-72087161 MS.gene017045:CDS
GATGACCTACAGCGGGGAAA+GGG 0.505887 5.1:+72088131 None:intergenic
GAACTGGGCAACGAGTTAGA+AGG 0.506299 5.1:+72087623 None:intergenic
TAGAAGCTTCGCGAACTCTA+CGG 0.509290 5.1:+72088099 None:intergenic
GTCAACAATGACAGCGGCGA+GGG 0.514708 5.1:+72087835 None:intergenic
CAGAAAGAGGGTAATCAGAT+GGG 0.516952 5.1:+72087213 None:intergenic
AGATAGGAAGGGTAATTGGA+TGG 0.519701 5.1:-72087145 MS.gene017045:CDS
CTTCTGGAAGGTGGATGACA+TGG 0.525471 5.1:+72087972 None:intergenic
CAACATGAAGAAAGTGGAAG+TGG 0.528084 5.1:-72088161 None:intergenic
ACCGAATCCAAATCAGAAAG+AGG 0.529575 5.1:+72087200 None:intergenic
CCGCCTCCGAATAACTGTCT+TGG 0.532716 5.1:-72088062 MS.gene017045:CDS
GGCAACGAGTTAGAAGGAAC+CGG 0.534240 5.1:+72087629 None:intergenic
ATTGGTGTGTGAGTTGAAGA+TGG 0.536791 5.1:-72086976 MS.gene017045:CDS
GTGCTTCAACATGAAGAAAG+TGG 0.537371 5.1:-72088167 None:intergenic
CGAACCTGGATCAGAGGTTG+AGG 0.537687 5.1:+72087940 None:intergenic
TTTATCCCTTTCCCCGCTGT+AGG 0.539157 5.1:-72088136 MS.gene017045:CDS
TCAGAAAGAGGGTAATCAGA+TGG 0.540418 5.1:+72087212 None:intergenic
ATTATAATCAACGGTGCCCT+CGG 0.543424 5.1:+72087412 None:intergenic
TCCTTGCGTAGCACTGAACT+GGG 0.547109 5.1:+72087608 None:intergenic
AAGCTTGGTGCCCTTCGGTG+GGG 0.547798 5.1:+72087238 None:intergenic
CGGATTAGCAAAACTCGGAA+TGG 0.548963 5.1:+72087649 None:intergenic
CAAATCCTCCAGTGGCTGGG+TGG 0.551497 5.1:+72087099 None:intergenic
GAAACTAGATGACCTACAGC+GGG 0.554334 5.1:+72088124 None:intergenic
GAGAGAATCAGAGATGGGAA+TGG 0.556219 5.1:+72087994 None:intergenic
AGATGACCTACAGCGGGGAA+AGG 0.556356 5.1:+72088130 None:intergenic
AAGAAGACTTTGTTAGAAGG+TGG 0.557412 5.1:-72086804 MS.gene017045:CDS
AAATCCTCCAGTGGCTGGGT+GGG 0.559672 5.1:+72087100 None:intergenic
ACCGGACAACAGAGATAGGA+AGG 0.560305 5.1:-72087157 MS.gene017045:CDS
AAAATATATGCTCTCGAGTG+TGG 0.564548 5.1:+72087055 None:intergenic
GAATATAGAAATTCAAACCA+AGG 0.566858 5.1:+72087732 None:intergenic
GTGTGAGTTGAAGATGGCTG+TGG 0.568425 5.1:-72086970 MS.gene017045:CDS
CCAAGACAGTTATTCGGAGG+CGG 0.569653 5.1:+72088062 None:intergenic
CAAACCAAGGAAAGCTACGC+CGG 0.571273 5.1:+72087745 None:intergenic
GACATGGAGAGAATCAGAGA+TGG 0.576313 5.1:+72087988 None:intergenic
TTGTTCTCCAGTAGTGAGGT+TGG 0.577411 5.1:+72087865 None:intergenic
GAAGAACACAAACGCAGGGA+TGG 0.578401 5.1:+72087772 None:intergenic
ACATCGGATTCTGCAGTGTG+TGG 0.578921 5.1:+72088028 None:intergenic
AGAGCGTTCATATCCGAACC+TGG 0.580788 5.1:+72087926 None:intergenic
ATCTTCACGAGCTTCGCCAA+AGG 0.583166 5.1:-72087575 MS.gene017045:CDS
ACATGGAGAGAATCAGAGAT+GGG 0.586374 5.1:+72087989 None:intergenic
AAAGGCCTCAAGAATGCTGA+TGG 0.594318 5.1:-72087557 MS.gene017045:CDS
GATAGGAAGGGTAATTGGAT+GGG 0.597612 5.1:-72087144 MS.gene017045:CDS
CCGAATCCAAATCAGAAAGA+GGG 0.599051 5.1:+72087201 None:intergenic
CACGTTGTTCTCCAGTAGTG+AGG 0.601579 5.1:+72087861 None:intergenic
AGAAACTAGATGACCTACAG+CGG 0.606348 5.1:+72088123 None:intergenic
ATTATAATGATATCATCAAG+TGG 0.606646 5.1:-72087397 MS.gene017045:CDS
CATCGGATTCTGCAGTGTGT+GGG 0.607695 5.1:+72088029 None:intergenic
CATATCCGAACCTGGATCAG+AGG 0.609549 5.1:+72087934 None:intergenic
TGATGATCAACCTCCTTCGT+CGG 0.610120 5.1:-72087372 MS.gene017045:CDS
GCCCAGTTCAGTGCTACGCA+AGG 0.612517 5.1:-72087609 MS.gene017045:CDS
TAATGCCATCAGCATTCTTG+AGG 0.613506 5.1:+72087552 None:intergenic
ATAGTGGGGCACACTTTGTG+TGG 0.613833 5.1:-72087274 MS.gene017045:CDS
GGTGTACCCATATATCCAGT+AGG 0.618785 5.1:-72087461 MS.gene017045:CDS
AAACAAATCCTCCAGTGGCT+GGG 0.620127 5.1:+72087096 None:intergenic
GTCTGTTGTTCAGCAAAGAG+CGG 0.624299 5.1:+72087011 None:intergenic
AACCTAGAGCCCAAAACCGA+GGG 0.625327 5.1:-72087428 MS.gene017045:CDS
GATTTCATTGGATTACAGAG+TGG 0.628424 5.1:-72086946 MS.gene017045:CDS
GAACCTGGATCAGAGGTTGA+GGG 0.629208 5.1:+72087941 None:intergenic
CAAACGACCTAAGTAAGTGT+AGG 0.629998 5.1:+72086776 None:intergenic
GGAGGATTTGTTTCACACTG+TGG 0.630537 5.1:-72087086 MS.gene017045:CDS
TTGGTGTGCCCATTGCCACA+TGG 0.636926 5.1:-72087034 MS.gene017045:CDS
CAGAGGAAAACTACCGACGA+AGG 0.637069 5.1:+72087359 None:intergenic
GAACAGAAACTTCTGGAAGG+TGG 0.638462 5.1:+72087963 None:intergenic
GATTGATTATATTATGCACG+AGG 0.642551 5.1:-72086754 MS.gene017045:CDS
AATGGATTTAGCGTAGACAT+CGG 0.643110 5.1:+72088012 None:intergenic
CTAGCCCACCCAGCCACTGG+AGG 0.646311 5.1:-72087104 MS.gene017045:CDS
GATGATATCATTATAATCAA+CGG 0.646867 5.1:+72087403 None:intergenic
TCAACAATGACAGCGGCGAG+GGG 0.646989 5.1:+72087836 None:intergenic
ACTGCGGATAAGATAGAGAG+AGG 0.647805 5.1:-72086894 MS.gene017045:CDS
AGAAAGAGGGTAATCAGATG+GGG 0.648132 5.1:+72087214 None:intergenic
TGACCAAGACAGTTATTCGG+AGG 0.650487 5.1:+72088059 None:intergenic
AAACCTAGAGCCCAAAACCG+AGG 0.654049 5.1:-72087429 MS.gene017045:CDS
GAGGTGAAGAACACAAACGC+AGG 0.658205 5.1:+72087767 None:intergenic
AGGTGAAGAACACAAACGCA+GGG 0.662060 5.1:+72087768 None:intergenic
AGGGAACAGAAACTTCTGGA+AGG 0.665922 5.1:+72087960 None:intergenic
GGAACCGGATTAGCAAAACT+CGG 0.666327 5.1:+72087644 None:intergenic
AGGAAAACTACCGACGAAGG+AGG 0.670493 5.1:+72087362 None:intergenic
TTCAGCAAAGAGCGGCCATG+TGG 0.673394 5.1:+72087019 None:intergenic
ACCAAGGAAAGCTACGCCGG+AGG 0.673603 5.1:+72087748 None:intergenic
ATTTGCTATTGAGAATAGTG+GGG 0.680393 5.1:-72087288 MS.gene017045:CDS
TGTCAACAATGACAGCGGCG+AGG 0.683145 5.1:+72087834 None:intergenic
GTGTGAAACAAATCCTCCAG+TGG 0.686203 5.1:+72087091 None:intergenic
CCGGACAACAGAGATAGGAA+GGG 0.692994 5.1:-72087156 MS.gene017045:CDS
CTCACTACTGGAGAACAACG+TGG 0.718862 5.1:-72087860 MS.gene017045:CDS
GAACATGTCAACAATGACAG+CGG 0.720643 5.1:+72087829 None:intergenic
TGAAGAGCTAGAATCCTATG+CGG 0.738045 5.1:-72087516 MS.gene017045:CDS
AAACTAGATGACCTACAGCG+GGG 0.795433 5.1:+72088125 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAATGATATCATCAAG+TGG - chr5.1:72087509-72087528 MS.gene017045:CDS 20.0%
!! GATGATATCATTATAATCAA+CGG + chr5.1:72087506-72087525 None:intergenic 20.0%
! GAATATAGAAATTCAAACCA+AGG + chr5.1:72087177-72087196 None:intergenic 25.0%
AGTAAGAAGACTTTGTTAGA+AGG - chr5.1:72088099-72088118 MS.gene017045:CDS 30.0%
ATAAGATAGAGAGAGGAATA+CGG - chr5.1:72088019-72088038 MS.gene017045:CDS 30.0%
GATTGATTATATTATGCACG+AGG - chr5.1:72088152-72088171 MS.gene017045:CDS 30.0%
! ACAGACTAATGCTTTTCAAT+TGG - chr5.1:72087912-72087931 MS.gene017045:CDS 30.0%
!! ATTTGCTATTGAGAATAGTG+GGG - chr5.1:72087618-72087637 MS.gene017045:CDS 30.0%
!! CATTTGCTATTGAGAATAGT+GGG - chr5.1:72087617-72087636 MS.gene017045:CDS 30.0%
AAAATATATGCTCTCGAGTG+TGG + chr5.1:72087854-72087873 None:intergenic 35.0%
AAGAAGACTTTGTTAGAAGG+TGG - chr5.1:72088102-72088121 MS.gene017045:CDS 35.0%
GATTTCATTGGATTACAGAG+TGG - chr5.1:72087960-72087979 MS.gene017045:CDS 35.0%
TAGTTCAGGATGAGAGAAAA+AGG + chr5.1:72087422-72087441 None:intergenic 35.0%
TCATGACCAAGACAGTTATT+CGG + chr5.1:72086853-72086872 None:intergenic 35.0%
TCCGCAGTTAAAAGAAAGTT+AGG + chr5.1:72088000-72088019 None:intergenic 35.0%
TGATTACCCTCTTTCTGATT+TGG - chr5.1:72087699-72087718 MS.gene017045:CDS 35.0%
TGGATAAAGATGGAGATTTC+AGG - chr5.1:72088049-72088068 MS.gene017045:CDS 35.0%
TTTCGATGAGGATCAGATTA+AGG - chr5.1:72087588-72087607 MS.gene017045:CDS 35.0%
! AATGGATTTAGCGTAGACAT+CGG + chr5.1:72086897-72086916 None:intergenic 35.0%
!! ACACTCGAGAGCATATATTT+TGG - chr5.1:72087853-72087872 MS.gene017045:CDS 35.0%
!! GCATTTGCTATTGAGAATAG+TGG - chr5.1:72087616-72087635 MS.gene017045:CDS 35.0%
!! GCCTAACTTTCTTTTAACTG+CGG - chr5.1:72087996-72088015 MS.gene017045:CDS 35.0%
!! TTGGGCTCTAGGTTTAATAT+GGG + chr5.1:72087472-72087491 None:intergenic 35.0%
!! TTTGGGCTCTAGGTTTAATA+TGG + chr5.1:72087473-72087492 None:intergenic 35.0%
!!! GATTACAGAGTGGAGTTTTT+TGG - chr5.1:72087970-72087989 MS.gene017045:CDS 35.0%
ACAGAGATAGGAAGGGTAAT+TGG - chr5.1:72087757-72087776 MS.gene017045:CDS 40.0%
ACATGGAGAGAATCAGAGAT+GGG + chr5.1:72086920-72086939 None:intergenic 40.0%
ACCGAATCCAAATCAGAAAG+AGG + chr5.1:72087709-72087728 None:intergenic 40.0%
AGAAACTAGATGACCTACAG+CGG + chr5.1:72086786-72086805 None:intergenic 40.0%
AGAAAGAGGGTAATCAGATG+GGG + chr5.1:72087695-72087714 None:intergenic 40.0%
AGATAGGAAGGGTAATTGGA+TGG - chr5.1:72087761-72087780 MS.gene017045:CDS 40.0%
AGGTTTAATATGGGTCCTAC+TGG + chr5.1:72087463-72087482 None:intergenic 40.0%
ATGGGTCCTACTGGATATAT+GGG + chr5.1:72087454-72087473 None:intergenic 40.0%
ATTATAATCAACGGTGCCCT+CGG + chr5.1:72087497-72087516 None:intergenic 40.0%
CAAACGACCTAAGTAAGTGT+AGG + chr5.1:72088133-72088152 None:intergenic 40.0%
CAGAAAGAGGGTAATCAGAT+GGG + chr5.1:72087696-72087715 None:intergenic 40.0%
CCGAATCCAAATCAGAAAGA+GGG + chr5.1:72087708-72087727 None:intergenic 40.0%
GAACATGTCAACAATGACAG+CGG + chr5.1:72087080-72087099 None:intergenic 40.0%
GATAGGAAGGGTAATTGGAT+GGG - chr5.1:72087762-72087781 MS.gene017045:CDS 40.0%
GGATCTTCCTACACTTACTT+AGG - chr5.1:72088123-72088142 MS.gene017045:CDS 40.0%
TAATGCCATCAGCATTCTTG+AGG + chr5.1:72087357-72087376 None:intergenic 40.0%
TATGGGTCCTACTGGATATA+TGG + chr5.1:72087455-72087474 None:intergenic 40.0%
TCAGAAAGAGGGTAATCAGA+TGG + chr5.1:72087697-72087716 None:intergenic 40.0%
TGAAGAGCTAGAATCCTATG+CGG - chr5.1:72087390-72087409 MS.gene017045:CDS 40.0%
TTCTCTCATCCTGAACTAGA+TGG - chr5.1:72087424-72087443 MS.gene017045:CDS 40.0%
! ATTGGTGTGTGAGTTGAAGA+TGG - chr5.1:72087930-72087949 MS.gene017045:CDS 40.0%
! CATTCCGAGTTTTGCTAATC+CGG - chr5.1:72087258-72087277 MS.gene017045:CDS 40.0%
!! CCCTCTTTCTGATTTGGATT+CGG - chr5.1:72087705-72087724 MS.gene017045:CDS 40.0%
!! TGGATTCGGTTTTACCTGAA+GGG - chr5.1:72087719-72087738 MS.gene017045:CDS 40.0%
!! TTGGATTCGGTTTTACCTGA+AGG - chr5.1:72087718-72087737 MS.gene017045:CDS 40.0%
AAACAAATCCTCCAGTGGCT+GGG + chr5.1:72087813-72087832 None:intergenic 45.0%
AAACTAGATGACCTACAGCG+GGG + chr5.1:72086784-72086803 None:intergenic 45.0%
AAAGGCCTCAAGAATGCTGA+TGG - chr5.1:72087349-72087368 MS.gene017045:CDS 45.0%
ACTGCGGATAAGATAGAGAG+AGG - chr5.1:72088012-72088031 MS.gene017045:CDS 45.0%
AGGGAACAGAAACTTCTGGA+AGG + chr5.1:72086949-72086968 None:intergenic 45.0%
AGGTGAAGAACACAAACGCA+GGG + chr5.1:72087141-72087160 None:intergenic 45.0%
ATCAGCATTCTTGAGGCCTT+TGG + chr5.1:72087350-72087369 None:intergenic 45.0%
CGCAGGGATGGAAAATTCTT+TGG + chr5.1:72087125-72087144 None:intergenic 45.0%
CGGAGTGTGTTGGATAAAGA+TGG - chr5.1:72088039-72088058 MS.gene017045:CDS 45.0%
GAAAAAGGAGTGAACCGCAT+AGG + chr5.1:72087407-72087426 None:intergenic 45.0%
GAAACTAGATGACCTACAGC+GGG + chr5.1:72086785-72086804 None:intergenic 45.0%
GACATGGAGAGAATCAGAGA+TGG + chr5.1:72086921-72086940 None:intergenic 45.0%
GAGAGAATCAGAGATGGGAA+TGG + chr5.1:72086915-72086934 None:intergenic 45.0%
GATGGCTGTGGAGATTTCAT+TGG - chr5.1:72087948-72087967 MS.gene017045:CDS 45.0%
GGTGTACCCATATATCCAGT+AGG - chr5.1:72087445-72087464 MS.gene017045:CDS 45.0%
GTCTGTTGTTCAGCAAAGAG+CGG + chr5.1:72087898-72087917 None:intergenic 45.0%
GTGTGAAACAAATCCTCCAG+TGG + chr5.1:72087818-72087837 None:intergenic 45.0%
GTTGAGGGAACAGAAACTTC+TGG + chr5.1:72086953-72086972 None:intergenic 45.0%
TACCTGAAGGGTTCTTAGAC+CGG - chr5.1:72087731-72087750 MS.gene017045:CDS 45.0%
TAGAAGCTTCGCGAACTCTA+CGG + chr5.1:72086810-72086829 None:intergenic 45.0%
TGACCAAGACAGTTATTCGG+AGG + chr5.1:72086850-72086869 None:intergenic 45.0%
TGATGATCAACCTCCTTCGT+CGG - chr5.1:72087534-72087553 MS.gene017045:CDS 45.0%
TTAGACCGGACAACAGAGAT+AGG - chr5.1:72087745-72087764 MS.gene017045:CDS 45.0%
TTATTCGGAGGCGGTTATCA+TGG + chr5.1:72086838-72086857 None:intergenic 45.0%
TTGTTCTCCAGTAGTGAGGT+TGG + chr5.1:72087044-72087063 None:intergenic 45.0%
! ATGGGTACACCATCTAGTTC+AGG + chr5.1:72087436-72087455 None:intergenic 45.0%
! CGGTAGTTTTCCTCTGCTTT+GGG - chr5.1:72087554-72087573 MS.gene017045:CDS 45.0%
! CGTTTGGTTTCTGAGCTTCA+AGG + chr5.1:72087006-72087025 None:intergenic 45.0%
! GAACAGAAACTTCTGGAAGG+TGG + chr5.1:72086946-72086965 None:intergenic 45.0%
! GATTTGTTTCACACTGTGGC+TGG - chr5.1:72087824-72087843 MS.gene017045:CDS 45.0%
! GGAGGATTTGTTTCACACTG+TGG - chr5.1:72087820-72087839 MS.gene017045:CDS 45.0%
! TCGGTAGTTTTCCTCTGCTT+TGG - chr5.1:72087553-72087572 MS.gene017045:CDS 45.0%
!! CGGATTAGCAAAACTCGGAA+TGG + chr5.1:72087260-72087279 None:intergenic 45.0%
!! GAGATGGCTTGTTTGACGTT+TGG + chr5.1:72087022-72087041 None:intergenic 45.0%
!! GGAACCGGATTAGCAAAACT+CGG + chr5.1:72087265-72087284 None:intergenic 45.0%
!! TTTCCTCTGCTTTGGGAGAA+GGG - chr5.1:72087561-72087580 MS.gene017045:CDS 45.0%
!!! TTTTCCTCTGCTTTGGGAGA+AGG - chr5.1:72087560-72087579 MS.gene017045:CDS 45.0%
AAACCTAGAGCCCAAAACCG+AGG - chr5.1:72087477-72087496 MS.gene017045:CDS 50.0%
AACCTAGAGCCCAAAACCGA+GGG - chr5.1:72087478-72087497 MS.gene017045:CDS 50.0%
ACATCGGATTCTGCAGTGTG+TGG + chr5.1:72086881-72086900 None:intergenic 50.0%
ACCGGACAACAGAGATAGGA+AGG - chr5.1:72087749-72087768 MS.gene017045:CDS 50.0%
AGGAAAACTACCGACGAAGG+AGG + chr5.1:72087547-72087566 None:intergenic 50.0%
ATCTTCACGAGCTTCGCCAA+AGG - chr5.1:72087331-72087350 MS.gene017045:CDS 50.0%
CAAACCAAGGAAAGCTACGC+CGG + chr5.1:72087164-72087183 None:intergenic 50.0%
CACGTTGTTCTCCAGTAGTG+AGG + chr5.1:72087048-72087067 None:intergenic 50.0%
CAGAGGAAAACTACCGACGA+AGG + chr5.1:72087550-72087569 None:intergenic 50.0%
CATATCCGAACCTGGATCAG+AGG + chr5.1:72086975-72086994 None:intergenic 50.0%
CATCGGATTCTGCAGTGTGT+GGG + chr5.1:72086880-72086899 None:intergenic 50.0%
CCAAGACAGTTATTCGGAGG+CGG + chr5.1:72086847-72086866 None:intergenic 50.0%
CCCTTCCTATCTCTGTTGTC+CGG + chr5.1:72087753-72087772 None:intergenic 50.0%
CCGGACAACAGAGATAGGAA+GGG - chr5.1:72087750-72087769 MS.gene017045:CDS 50.0%
CTCAACCTCTGATCCAGGTT+CGG - chr5.1:72086967-72086986 MS.gene017045:CDS 50.0%
CTCACTACTGGAGAACAACG+TGG - chr5.1:72087046-72087065 MS.gene017045:CDS 50.0%
GAAACAAATCCTCCAGTGGC+TGG + chr5.1:72087814-72087833 None:intergenic 50.0%
GAACCTGGATCAGAGGTTGA+GGG + chr5.1:72086968-72086987 None:intergenic 50.0%
GAACTGGGCAACGAGTTAGA+AGG + chr5.1:72087286-72087305 None:intergenic 50.0%
GAAGAACACAAACGCAGGGA+TGG + chr5.1:72087137-72087156 None:intergenic 50.0%
GAGAGGAATACGGAGTGTGT+TGG - chr5.1:72088029-72088048 MS.gene017045:CDS 50.0%
GAGGTGAAGAACACAAACGC+AGG + chr5.1:72087142-72087161 None:intergenic 50.0%
GCGTTTGTGTTCTTCACCTC+CGG - chr5.1:72087142-72087161 MS.gene017045:CDS 50.0%
GGCAACGAGTTAGAAGGAAC+CGG + chr5.1:72087280-72087299 None:intergenic 50.0%
GGCTAGTATTTGGGCTTGTG+GGG + chr5.1:72087788-72087807 None:intergenic 50.0%
GTAATCAGATGGGGCAAGCT+TGG + chr5.1:72087686-72087705 None:intergenic 50.0%
TCCAGTAGTGAGGTTGGAGA+TGG + chr5.1:72087038-72087057 None:intergenic 50.0%
TTTATCCCTTTCCCCGCTGT+AGG - chr5.1:72086770-72086789 MS.gene017045:CDS 50.0%
TTTGGCGAAGCTCGTGAAGA+TGG + chr5.1:72087332-72087351 None:intergenic 50.0%
! AGAGCGTTCATATCCGAACC+TGG + chr5.1:72086983-72087002 None:intergenic 50.0%
! ATAGTGGGGCACACTTTGTG+TGG - chr5.1:72087632-72087651 MS.gene017045:CDS 50.0%
! CTTCTGGAAGGTGGATGACA+TGG + chr5.1:72086937-72086956 None:intergenic 50.0%
! GGGCTAGTATTTGGGCTTGT+GGG + chr5.1:72087789-72087808 None:intergenic 50.0%
! GTGTGAGTTGAAGATGGCTG+TGG - chr5.1:72087936-72087955 MS.gene017045:CDS 50.0%
! TCCTTGCGTAGCACTGAACT+GGG + chr5.1:72087301-72087320 None:intergenic 50.0%
! TTCCTTGCGTAGCACTGAAC+TGG + chr5.1:72087302-72087321 None:intergenic 50.0%
!! TGGGCTAGTATTTGGGCTTG+TGG + chr5.1:72087790-72087809 None:intergenic 50.0%
!! TTCCTCTGCTTTGGGAGAAG+GGG - chr5.1:72087562-72087581 MS.gene017045:CDS 50.0%
AAAGAGCGGCCATGTGGCAA+TGG + chr5.1:72087884-72087903 None:intergenic 55.0%
AAATCCTCCAGTGGCTGGGT+GGG + chr5.1:72087809-72087828 None:intergenic 55.0%
AAGAGCGGCCATGTGGCAAT+GGG + chr5.1:72087883-72087902 None:intergenic 55.0%
AGATGACCTACAGCGGGGAA+AGG + chr5.1:72086779-72086798 None:intergenic 55.0%
CCGCCTCCGAATAACTGTCT+TGG - chr5.1:72086844-72086863 MS.gene017045:CDS 55.0%
CGAACCTGGATCAGAGGTTG+AGG + chr5.1:72086969-72086988 None:intergenic 55.0%
CTACGTAAACCCCCACCGAA+GGG - chr5.1:72087658-72087677 MS.gene017045:CDS 55.0%
GAGAAGGGGGTCTTTCGATG+AGG - chr5.1:72087576-72087595 MS.gene017045:CDS 55.0%
GATGACCTACAGCGGGGAAA+GGG + chr5.1:72086778-72086797 None:intergenic 55.0%
GCCATCTCCAACCTCACTAC+TGG - chr5.1:72087034-72087053 MS.gene017045:CDS 55.0%
GTCAACAATGACAGCGGCGA+GGG + chr5.1:72087074-72087093 None:intergenic 55.0%
GTCCGGTCTAAGAACCCTTC+AGG + chr5.1:72087736-72087755 None:intergenic 55.0%
GTTCCCTCAACCTCTGATCC+AGG - chr5.1:72086962-72086981 MS.gene017045:CDS 55.0%
TCAACAATGACAGCGGCGAG+GGG + chr5.1:72087073-72087092 None:intergenic 55.0%
TCTACGTAAACCCCCACCGA+AGG - chr5.1:72087657-72087676 MS.gene017045:CDS 55.0%
TGTCAACAATGACAGCGGCG+AGG + chr5.1:72087075-72087094 None:intergenic 55.0%
TTCAGCAAAGAGCGGCCATG+TGG + chr5.1:72087890-72087909 None:intergenic 55.0%
TTGGTGTGCCCATTGCCACA+TGG - chr5.1:72087872-72087891 MS.gene017045:CDS 55.0%
! ATCAACGGTGCCCTCGGTTT+TGG + chr5.1:72087491-72087510 None:intergenic 55.0%
! TCAACGGTGCCCTCGGTTTT+GGG + chr5.1:72087490-72087509 None:intergenic 55.0%
!! GGCTGGGTGGGCTAGTATTT+GGG + chr5.1:72087797-72087816 None:intergenic 55.0%
!! TCCTCTGCTTTGGGAGAAGG+GGG - chr5.1:72087563-72087582 MS.gene017045:CDS 55.0%
!! TGGCTGGGTGGGCTAGTATT+TGG + chr5.1:72087798-72087817 None:intergenic 55.0%
ACCAAGGAAAGCTACGCCGG+AGG + chr5.1:72087161-72087180 None:intergenic 60.0%
ACCCCCTTCTCCCAAAGCAG+AGG + chr5.1:72087567-72087586 None:intergenic 60.0%
ACCTCCGGCGTAGCTTTCCT+TGG - chr5.1:72087157-72087176 MS.gene017045:CDS 60.0%
ATACTAGCCCACCCAGCCAC+TGG - chr5.1:72087799-72087818 MS.gene017045:CDS 60.0%
CAAATCCTCCAGTGGCTGGG+TGG + chr5.1:72087810-72087829 None:intergenic 60.0%
GCCCAGTTCAGTGCTACGCA+AGG - chr5.1:72087297-72087316 MS.gene017045:CDS 60.0%
!! AAGCTTGGTGCCCTTCGGTG+GGG + chr5.1:72087671-72087690 None:intergenic 60.0%
!! CAAGCTTGGTGCCCTTCGGT+GGG + chr5.1:72087672-72087691 None:intergenic 60.0%
!!! TGCCCTCGGTTTTGGGCTCT+AGG + chr5.1:72087483-72087502 None:intergenic 60.0%
!! AGCTTGGTGCCCTTCGGTGG+GGG + chr5.1:72087670-72087689 None:intergenic 65.0%
!! GCAAGCTTGGTGCCCTTCGG+TGG + chr5.1:72087673-72087692 None:intergenic 65.0%
!! GGGGCAAGCTTGGTGCCCTT+CGG + chr5.1:72087676-72087695 None:intergenic 65.0%
CTAGCCCACCCAGCCACTGG+AGG - chr5.1:72087802-72087821 MS.gene017045:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 72086749 72088179 72086749 ID=MS.gene017045
chr5.1 mRNA 72086749 72088179 72086749 ID=MS.gene017045.t1;Parent=MS.gene017045
chr5.1 exon 72086749 72088179 72086749 ID=MS.gene017045.t1.exon1;Parent=MS.gene017045.t1
chr5.1 CDS 72086749 72088179 72086749 ID=cds.MS.gene017045.t1;Parent=MS.gene017045.t1
Gene Sequence

>MS.gene017045

ATGAAGAAAGTGGAAGTGGTGTTTATCCCTTTCCCCGCTGTAGGTCATCTAGTTTCTGCCGTAGAGTTCGCGAAGCTTCTAATCAACCATGATAACCGCCTCCGAATAACTGTCTTGGTCATGAAATTCCCACACACTGCAGAATCCGATGTCTACGCTAAATCCATTCCCATCTCTGATTCTCTCCATGTCATCCACCTTCCAGAAGTTTCTGTTCCCTCAACCTCTGATCCAGGTTCGGATATGAACGCTCTCCTTGAAGCTCAGAAACCAAACGTCAAACAAGCCATCTCCAACCTCACTACTGGAGAACAACGTGGACCCCTCGCCGCTGTCATTGTTGACATGTTCTGCACAAACATGATTGATGTTGCCAAAGAATTTTCCATCCCTGCGTTTGTGTTCTTCACCTCCGGCGTAGCTTTCCTTGGTTTGAATTTCTATATTCAAAATCTGTTTGAACGAGACAGCGTTGATTCGACTCAGTTGATGCAAGTCACTGAGCTGTCCATTCCGAGTTTTGCTAATCCGGTTCCTTCTAACTCGTTGCCCAGTTCAGTGCTACGCAAGGAATACAAATCCATCTTCACGAGCTTCGCCAAAGGCCTCAAGAATGCTGATGGCATTATTGTCAATTCTTTTGAAGAGCTAGAATCCTATGCGGTTCACTCCTTTTTCTCTCATCCTGAACTAGATGGTGTACCCATATATCCAGTAGGACCCATATTAAACCTAGAGCCCAAAACCGAGGGCACCGTTGATTATAATGATATCATCAAGTGGCTTGATGATCAACCTCCTTCGTCGGTAGTTTTCCTCTGCTTTGGGAGAAGGGGGTCTTTCGATGAGGATCAGATTAAGGAGATTGCATTTGCTATTGAGAATAGTGGGGCACACTTTGTGTGGTCTCTACGTAAACCCCCACCGAAGGGCACCAAGCTTGCCCCATCTGATTACCCTCTTTCTGATTTGGATTCGGTTTTACCTGAAGGGTTCTTAGACCGGACAACAGAGATAGGAAGGGTAATTGGATGGGCCCCACAAGCCCAAATACTAGCCCACCCAGCCACTGGAGGATTTGTTTCACACTGTGGCTGGAATTCCACACTCGAGAGCATATATTTTGGTGTGCCCATTGCCACATGGCCGCTCTTTGCTGAACAACAGACTAATGCTTTTCAATTGGTGTGTGAGTTGAAGATGGCTGTGGAGATTTCATTGGATTACAGAGTGGAGTTTTTTGGTGAGCCTAACTTTCTTTTAACTGCGGATAAGATAGAGAGAGGAATACGGAGTGTGTTGGATAAAGATGGAGATTTCAGGAAAAAAGTGAAAGAGATGAGTGAAAAGAGTAAGAAGACTTTGTTAGAAGGTGGATCTTCCTACACTTACTTAGGTCGTTTGATTGATTATATTATGCACGAGGTATGA
Protein sequence

>MS.gene017045.t1

MKKVEVVFIPFPAVGHLVSAVEFAKLLINHDNRLRITVLVMKFPHTAESDVYAKSIPISDSLHVIHLPEVSVPSTSDPGSDMNALLEAQKPNVKQAISNLTTGEQRGPLAAVIVDMFCTNMIDVAKEFSIPAFVFFTSGVAFLGLNFYIQNLFERDSVDSTQLMQVTELSIPSFANPVPSNSLPSSVLRKEYKSIFTSFAKGLKNADGIIVNSFEELESYAVHSFFSHPELDGVPIYPVGPILNLEPKTEGTVDYNDIIKWLDDQPPSSVVFLCFGRRGSFDEDQIKEIAFAIENSGAHFVWSLRKPPPKGTKLAPSDYPLSDLDSVLPEGFLDRTTEIGRVIGWAPQAQILAHPATGGFVSHCGWNSTLESIYFGVPIATWPLFAEQQTNAFQLVCELKMAVEISLDYRVEFFGEPNFLLTADKIERGIRSVLDKDGDFRKKVKEMSEKSKKTLLEGGSSYTYLGRLIDYIMHEV