AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038263

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038263.t1 MTR_5g090700 94.606 482 24 1 1 480 1 482 0.0 937
MS.gene038263.t1 MTR_5g090670 80.705 482 87 4 1 478 1 480 0.0 797
MS.gene038263.t1 MTR_5g090620 77.131 481 105 4 1 478 1 479 0.0 758
MS.gene038263.t1 MTR_5g090580 78.586 481 97 5 1 478 1 478 0.0 749
MS.gene038263.t1 MTR_5g090630 76.569 478 103 2 1 478 1 469 0.0 746
MS.gene038263.t1 MTR_5g090660 75.992 479 113 1 1 479 1 477 0.0 745
MS.gene038263.t1 MTR_5g090610 74.113 479 110 2 1 479 1 465 0.0 725
MS.gene038263.t1 MTR_5g090600 73.597 481 104 5 1 480 1 459 0.0 711
MS.gene038263.t1 MTR_5g098930 67.427 482 142 6 1 478 1 471 0.0 652
MS.gene038263.t1 MTR_5g090690 64.720 411 82 6 67 468 18 374 1.10e-167 478
MS.gene038263.t1 MTR_5g090650 65.057 352 90 2 1 352 1 319 3.96e-157 449
MS.gene038263.t1 MTR_2g046750 43.388 484 241 14 1 472 1 463 1.73e-122 366
MS.gene038263.t1 MTR_5g070040 42.094 487 242 17 2 475 8 467 3.87e-121 362
MS.gene038263.t1 MTR_2g040530 43.064 483 243 12 1 472 1 462 3.14e-120 360
MS.gene038263.t1 MTR_2g046820 43.892 483 237 12 1 472 1 460 7.72e-120 359
MS.gene038263.t1 MTR_5g070090 41.237 485 242 13 2 474 8 461 7.37e-114 343
MS.gene038263.t1 MTR_6g023665 33.958 480 284 13 2 470 10 467 4.38e-78 252
MS.gene038263.t1 MTR_3g009510 32.323 495 291 16 1 472 1 474 1.54e-77 250
MS.gene038263.t1 MTR_6g488280 33.820 479 284 14 3 470 4 460 2.75e-77 249
MS.gene038263.t1 MTR_0428s0010 33.820 479 284 14 3 470 4 460 2.75e-77 249
MS.gene038263.t1 MTR_7g117170 35.343 481 270 16 6 470 16 471 7.15e-74 241
MS.gene038263.t1 MTR_8g465670 32.252 493 298 12 2 479 4 475 1.03e-70 233
MS.gene038263.t1 MTR_8g027870 34.979 486 259 18 6 470 19 468 1.05e-69 230
MS.gene038263.t1 MTR_8g006730 30.977 481 299 12 2 470 3 462 1.24e-69 229
MS.gene038263.t1 MTR_8g027885 35.430 477 269 19 6 470 19 468 2.25e-69 229
MS.gene038263.t1 MTR_8g006220 33.000 500 294 15 2 479 3 483 2.36e-69 229
MS.gene038263.t1 MTR_8g006710 31.288 489 298 14 2 476 3 467 1.30e-68 227
MS.gene038263.t1 MTR_0184s0030 33.333 480 276 20 2 463 3 456 6.94e-66 219
MS.gene038263.t1 MTR_8g077590 32.311 489 275 20 4 470 8 462 6.62e-65 217
MS.gene038263.t1 MTR_0184s0040 30.021 483 300 13 2 470 18 476 7.57e-65 217
MS.gene038263.t1 MTR_0078s0190 30.021 483 300 13 2 470 18 476 7.57e-65 217
MS.gene038263.t1 MTR_5g019580 29.293 495 300 13 2 470 4 474 1.31e-64 217
MS.gene038263.t1 MTR_6g033675 30.123 488 296 15 3 472 2 462 3.10e-64 216
MS.gene038263.t1 MTR_8g006270 31.959 485 288 15 2 471 3 460 3.43e-64 215
MS.gene038263.t1 MTR_6g033615 32.988 482 272 17 3 470 2 446 1.78e-62 210
MS.gene038263.t1 MTR_8g074550 31.737 501 297 17 2 474 5 488 1.10e-61 209
MS.gene038263.t1 MTR_0078s0060 30.642 483 297 16 2 470 3 461 1.14e-61 208
MS.gene038263.t1 MTR_0078s0010 29.774 487 309 16 2 476 3 468 1.14e-61 208
MS.gene038263.t1 MTR_8g008970 31.250 480 297 17 2 470 3 460 8.32e-61 213
MS.gene038263.t1 MTR_8g008970 31.159 276 162 6 198 470 534 784 3.28e-31 128
MS.gene038263.t1 MTR_6g005600 31.250 480 298 13 3 470 4 463 1.16e-60 206
MS.gene038263.t1 MTR_8g006260 31.458 480 285 16 3 463 4 458 1.80e-60 206
MS.gene038263.t1 MTR_8g009073 30.223 493 285 16 2 470 3 460 5.40e-60 204
MS.gene038263.t1 MTR_7g047030 30.041 486 297 18 2 470 3 462 5.79e-60 204
MS.gene038263.t1 MTR_7g047270 30.041 486 297 18 2 470 3 462 5.79e-60 204
MS.gene038263.t1 MTR_8g009055 30.977 481 299 15 2 470 3 462 7.50e-60 204
MS.gene038263.t1 MTR_6g033625 31.070 486 290 16 3 470 2 460 2.08e-59 202
MS.gene038263.t1 MTR_7g046490 32.515 489 280 20 2 471 3 460 3.39e-59 202
MS.gene038263.t1 MTR_8g009067 30.579 484 297 17 2 471 3 461 3.98e-59 202
MS.gene038263.t1 MTR_8g012745 30.957 491 282 17 2 467 3 461 5.77e-59 201
MS.gene038263.t1 MTR_8g012635 30.461 499 295 17 2 476 3 473 2.04e-58 200
MS.gene038263.t1 MTR_6g033725 28.600 500 285 15 3 472 2 459 2.20e-58 200
MS.gene038263.t1 MTR_8g009050 31.263 483 295 16 2 470 3 462 3.03e-58 199
MS.gene038263.t1 MTR_5g019580 28.889 495 274 14 2 470 56 498 1.56e-57 199
MS.gene038263.t1 MTR_1g019510 29.854 479 304 12 2 470 3 459 3.14e-56 194
MS.gene038263.t1 MTR_6g033660 29.278 485 297 15 6 472 5 461 4.75e-56 194
MS.gene038263.t1 MTR_8g012650 30.247 486 287 17 2 463 3 460 1.81e-55 192
MS.gene038263.t1 MTR_8g008990 30.435 483 301 16 2 470 3 464 4.66e-54 188
MS.gene038263.t1 MTR_3g479520 29.297 512 288 17 2 477 12 485 1.89e-53 187
MS.gene038263.t1 MTR_8g009063 29.072 485 303 17 2 470 10 469 1.19e-52 185
MS.gene038263.t1 MTR_7g102460 29.412 510 296 17 3 477 7 487 6.97e-52 183
MS.gene038263.t1 MTR_4g095008 28.931 477 283 15 15 471 21 461 1.15e-50 181
MS.gene038263.t1 MTR_8g009067 33.148 359 210 13 124 471 4 343 1.79e-50 176
MS.gene038263.t1 MTR_4g485630 29.032 496 299 18 6 477 10 476 1.47e-49 176
MS.gene038263.t1 MTR_7g102450 29.200 500 293 18 7 480 13 477 4.43e-49 175
MS.gene038263.t1 MTR_4g094920 28.423 482 287 14 15 475 36 480 3.70e-48 173
MS.gene038263.t1 MTR_3g008010 26.511 513 295 16 3 475 8 478 4.06e-48 172
MS.gene038263.t1 MTR_8g066610 29.234 496 292 15 6 472 10 475 4.22e-48 172
MS.gene038263.t1 MTR_3g069710 28.827 503 280 15 2 480 9 457 4.91e-48 172
MS.gene038263.t1 MTR_3g079480 28.291 509 297 15 2 477 18 491 5.07e-48 172
MS.gene038263.t1 MTR_3g479490 29.109 505 294 18 2 475 3 474 5.22e-48 172
MS.gene038263.t1 MTR_5g464760 28.767 511 286 17 3 475 10 480 6.04e-48 172
MS.gene038263.t1 MTR_7g117405 28.144 501 299 17 7 477 14 483 1.03e-47 171
MS.gene038263.t1 MTR_6g014220 26.614 511 299 14 2 475 7 478 2.49e-47 170
MS.gene038263.t1 MTR_0536s0020 28.831 496 295 20 2 472 15 477 6.39e-47 169
MS.gene038263.t1 MTR_4g031800 27.916 523 279 19 2 478 6 476 8.01e-47 169
MS.gene038263.t1 MTR_4g118000 29.158 487 284 20 9 472 16 464 8.21e-47 169
MS.gene038263.t1 MTR_7g102490 27.308 509 310 16 3 477 7 489 9.68e-47 169
MS.gene038263.t1 MTR_5g072810 26.971 482 302 13 4 474 11 453 1.37e-46 168
MS.gene038263.t1 MTR_4g117890 28.000 500 298 19 2 474 10 474 3.70e-46 167
MS.gene038263.t1 MTR_8g012730 32.722 327 163 10 151 462 12 296 3.74e-46 163
MS.gene038263.t1 MTR_4g024020 27.573 515 309 16 3 479 7 495 3.83e-46 167
MS.gene038263.t1 MTR_8g009073 32.378 349 204 11 134 470 3 331 5.13e-46 163
MS.gene038263.t1 MTR_8g064880 27.778 450 274 14 6 432 10 431 8.32e-46 166
MS.gene038263.t1 MTR_6g014290 26.614 511 299 16 2 475 7 478 1.08e-45 166
MS.gene038263.t1 MTR_8g064870 28.856 402 239 14 96 477 102 476 2.98e-45 165
MS.gene038263.t1 MTR_6g038240 26.994 489 297 15 6 477 12 457 2.99e-45 164
MS.gene038263.t1 MTR_6g014250 25.832 511 303 14 2 475 7 478 3.22e-45 165
MS.gene038263.t1 MTR_6g035185 26.829 492 306 17 9 472 15 480 3.39e-45 165
MS.gene038263.t1 MTR_4g082820 28.600 493 303 20 6 480 8 469 3.79e-45 164
MS.gene038263.t1 MTR_3g049970 26.962 497 304 17 6 477 10 472 3.81e-45 164
MS.gene038263.t1 MTR_5g035580 27.328 494 284 15 6 476 14 455 3.90e-45 164
MS.gene038263.t1 MTR_7g080900 26.210 496 290 16 2 472 9 453 3.95e-45 164
MS.gene038263.t1 MTR_1g107360 25.249 503 299 12 5 477 9 464 5.78e-45 164
MS.gene038263.t1 MTR_5g029800 28.657 499 295 18 5 474 11 477 1.11e-44 163
MS.gene038263.t1 MTR_0891s0010 33.019 318 164 9 180 477 4 292 1.44e-44 158
MS.gene038263.t1 MTR_3g069690 28.119 505 281 17 2 479 5 454 1.48e-44 162
MS.gene038263.t1 MTR_8g012630 40.376 213 113 6 261 467 204 408 7.12e-44 160
MS.gene038263.t1 MTR_0288s0020 26.000 500 299 15 2 475 7 461 7.40e-44 160
MS.gene038263.t1 MTR_6g078320 27.439 492 319 15 4 476 10 482 7.41e-44 161
MS.gene038263.t1 MTR_1g062380 26.824 507 307 17 6 476 17 495 7.57e-44 161
MS.gene038263.t1 MTR_4g094220 27.059 510 292 17 3 471 5 475 1.26e-43 160
MS.gene038263.t1 MTR_7g102550 28.310 491 291 16 7 463 11 474 3.06e-43 159
MS.gene038263.t1 MTR_0036s0220 28.631 482 271 14 6 455 13 453 3.29e-43 159
MS.gene038263.t1 MTR_1g019520 38.565 223 126 3 259 478 2 216 4.95e-43 152
MS.gene038263.t1 MTR_7g012120 27.992 493 303 15 5 472 16 481 6.29e-43 159
MS.gene038263.t1 MTR_5g464810 27.647 510 289 15 4 475 11 478 7.08e-43 158
MS.gene038263.t1 MTR_5g064240 27.647 510 289 15 4 475 11 478 7.08e-43 158
MS.gene038263.t1 MTR_5g072830 25.567 485 302 12 4 474 9 448 7.61e-43 157
MS.gene038263.t1 MTR_5g045960 27.255 521 300 20 2 479 6 490 8.83e-43 158
MS.gene038263.t1 MTR_4g117960 26.923 494 301 16 9 472 15 478 8.88e-43 158
MS.gene038263.t1 MTR_4g117980 28.457 499 288 19 9 472 15 479 9.99e-43 158
MS.gene038263.t1 MTR_7g071040 27.364 497 311 14 3 472 15 488 1.16e-42 158
MS.gene038263.t1 MTR_1g107350 27.792 403 238 14 92 474 99 468 1.21e-42 157
MS.gene038263.t1 MTR_3g479610 32.704 318 165 10 180 477 27 315 1.98e-42 153
MS.gene038263.t1 MTR_4g082810 31.188 404 248 15 4 394 6 392 5.33e-42 154
MS.gene038263.t1 MTR_5g072840 25.873 487 302 13 4 476 9 450 5.91e-42 155
MS.gene038263.t1 MTR_2g098430 28.690 481 287 19 2 457 3 452 6.25e-42 156
MS.gene038263.t1 MTR_7g070940 30.978 368 230 8 113 472 119 470 6.55e-42 155
MS.gene038263.t1 MTR_5g045970 26.265 514 300 22 6 476 17 494 7.06e-42 156
MS.gene038263.t1 MTR_6g014040 26.886 517 293 17 2 475 7 481 8.41e-42 155
MS.gene038263.t1 MTR_4g117950 29.109 505 293 20 2 480 3 468 8.42e-42 155
MS.gene038263.t1 MTR_6g013440 27.006 511 299 17 2 475 8 481 9.40e-42 155
MS.gene038263.t1 MTR_3g479470 28.770 504 288 21 2 471 10 476 1.04e-41 155
MS.gene038263.t1 MTR_6g014050 28.395 405 235 13 97 475 106 481 1.10e-41 155
MS.gene038263.t1 MTR_1g107315 27.745 501 303 18 4 479 7 473 1.77e-41 154
MS.gene038263.t1 MTR_8g044140 31.016 374 227 10 115 472 88 446 2.46e-41 154
MS.gene038263.t1 MTR_5g072820 26.626 492 288 16 4 474 9 448 3.08e-41 153
MS.gene038263.t1 MTR_6g014020 25.195 512 307 16 2 475 7 480 3.94e-41 154
MS.gene038263.t1 MTR_1g107285 25.049 507 302 16 5 479 8 468 5.47e-41 153
MS.gene038263.t1 MTR_7g070740 27.400 500 306 17 3 472 9 481 9.17e-41 153
MS.gene038263.t1 MTR_0009s0240 27.459 488 298 18 3 471 5 455 1.24e-40 152
MS.gene038263.t1 MTR_8g059425 26.810 511 298 17 2 475 7 478 1.48e-40 152
MS.gene038263.t1 MTR_4g008630 36.100 241 137 8 239 474 234 462 1.72e-40 151
MS.gene038263.t1 MTR_7g070810 32.822 326 184 11 161 472 169 473 1.77e-40 152
MS.gene038263.t1 MTR_5g031840 26.772 508 291 17 1 474 1 461 2.36e-40 151
MS.gene038263.t1 MTR_5g067170 27.551 490 302 16 9 472 15 477 3.50e-40 151
MS.gene038263.t1 MTR_4g485620 30.688 378 220 10 113 472 99 452 3.71e-40 150
MS.gene038263.t1 MTR_7g070610 30.053 376 233 11 113 472 123 484 3.74e-40 151
MS.gene038263.t1 MTR_1g040310 30.295 373 228 9 115 472 126 481 3.83e-40 151
MS.gene038263.t1 MTR_1g107365 27.921 505 271 21 5 474 45 491 4.21e-40 151
MS.gene038263.t1 MTR_1g107380 26.823 384 229 12 111 475 123 473 4.82e-40 150
MS.gene038263.t1 MTR_1g032490 26.667 495 302 18 6 474 11 470 4.93e-40 150
MS.gene038263.t1 MTR_6g014270 25.737 509 308 14 3 475 5 479 6.71e-40 150
MS.gene038263.t1 MTR_0536s0010 26.572 493 304 17 2 472 18 474 7.39e-40 150
MS.gene038263.t1 MTR_7g070660 30.108 372 233 12 113 472 121 477 8.17e-40 150
MS.gene038263.t1 MTR_5g035560 26.667 495 286 15 6 476 12 453 8.44e-40 150
MS.gene038263.t1 MTR_5g031830 28.039 510 274 23 6 474 13 470 9.30e-40 149
MS.gene038263.t1 MTR_1g107375 25.761 493 296 15 5 474 8 453 1.06e-39 149
MS.gene038263.t1 MTR_2g035020 27.689 502 296 19 5 472 11 479 1.16e-39 150
MS.gene038263.t1 MTR_5g075440 28.307 378 224 9 115 476 111 457 1.39e-39 149
MS.gene038263.t1 MTR_6g014170 25.296 506 296 15 2 475 7 462 1.42e-39 149
MS.gene038263.t1 MTR_6g014150 26.367 512 301 17 2 475 4 477 1.56e-39 149
MS.gene038263.t1 MTR_5g016660 30.027 373 231 9 115 471 122 480 1.57e-39 149
MS.gene038263.t1 MTR_7g102560 26.275 510 299 18 7 475 11 484 1.84e-39 149
MS.gene038263.t1 MTR_1g029540 26.526 475 305 16 10 474 19 459 2.48e-39 148
MS.gene038263.t1 MTR_6g014200 26.459 514 296 19 3 475 5 477 2.49e-39 149
MS.gene038263.t1 MTR_6g038200 25.210 476 298 13 4 463 10 443 2.49e-39 148
MS.gene038263.t1 MTR_7g055710 28.723 376 237 11 113 472 121 481 2.94e-39 149
MS.gene038263.t1 MTR_7g070780 27.381 504 295 16 6 472 12 481 3.06e-39 149
MS.gene038263.t1 MTR_7g080940 23.705 502 303 15 3 478 9 456 7.00e-39 147
MS.gene038263.t1 MTR_6g014187 26.121 513 301 18 2 475 7 480 7.14e-39 147
MS.gene038263.t1 MTR_6g013450 25.536 513 303 16 3 475 8 481 7.32e-39 147
MS.gene038263.t1 MTR_2g035040 28.535 396 241 16 109 480 14 391 7.88e-39 145
MS.gene038263.t1 MTR_6g014300 26.877 506 290 18 2 475 9 466 1.04e-38 147
MS.gene038263.t1 MTR_7g070860 24.206 504 302 12 2 472 4 460 1.29e-38 146
MS.gene038263.t1 MTR_8g083290 26.839 503 292 17 6 475 5 464 2.06e-38 145
MS.gene038263.t1 MTR_6g035265 25.458 491 305 17 9 472 15 471 2.77e-38 145
MS.gene038263.t1 MTR_6g014310 27.148 512 295 18 3 475 9 481 2.87e-38 145
MS.gene038263.t1 MTR_6g038230 25.157 477 297 12 4 463 10 443 2.90e-38 145
MS.gene038263.t1 MTR_5g016480 26.087 506 305 21 2 476 5 472 2.93e-38 145
MS.gene038263.t1 MTR_7g070910 27.579 504 301 18 3 472 9 482 3.00e-38 146
MS.gene038263.t1 MTR_2g034990 27.490 502 297 21 5 472 11 479 3.85e-38 145
MS.gene038263.t1 MTR_4g485640 30.133 375 227 10 113 471 308 663 4.22e-38 147
MS.gene038263.t1 MTR_7g102520 27.689 502 306 15 7 476 14 490 5.17e-38 145
MS.gene038263.t1 MTR_6g038220 27.403 489 266 21 6 463 12 442 5.53e-38 144
MS.gene038263.t1 MTR_4g064987 27.105 487 295 19 3 476 6 445 6.19e-38 144
MS.gene038263.t1 MTR_7g070800 27.957 372 242 8 113 472 116 473 7.14e-38 145
MS.gene038263.t1 MTR_5g087620 25.243 515 307 17 2 472 7 487 8.37e-38 144
MS.gene038263.t1 MTR_5g031860 27.701 509 276 21 6 474 13 469 1.18e-37 144
MS.gene038263.t1 MTR_7g080950 24.800 500 302 16 3 479 4 452 1.66e-37 143
MS.gene038263.t1 MTR_7g070930 26.104 498 310 14 6 472 15 485 2.00e-37 144
MS.gene038263.t1 MTR_8g043470 29.412 374 198 10 111 471 54 374 2.22e-37 141
MS.gene038263.t1 MTR_2g008210 25.686 510 303 16 2 475 8 477 2.69e-37 143
MS.gene038263.t1 MTR_5g039900 26.613 496 307 16 5 471 13 480 3.88e-37 143
MS.gene038263.t1 MTR_4g485590 37.449 243 124 7 185 415 163 389 4.88e-37 141
MS.gene038263.t1 MTR_5g058320 25.494 506 296 17 3 475 8 465 6.69e-37 142
MS.gene038263.t1 MTR_4g064987 26.489 487 304 18 3 476 6 451 7.86e-37 141
MS.gene038263.t1 MTR_7g011470 25.636 511 292 17 2 475 7 466 9.05e-37 141
MS.gene038263.t1 MTR_5g040030 25.447 503 313 14 2 471 11 484 1.31e-36 141
MS.gene038263.t1 MTR_4g108250 27.022 507 297 15 6 472 12 485 1.77e-36 141
MS.gene038263.t1 MTR_6g038300 24.380 484 307 16 6 472 12 453 2.13e-36 140
MS.gene038263.t1 MTR_6g013900 25.819 519 292 16 3 475 8 479 2.48e-36 140
MS.gene038263.t1 MTR_3g084530 25.502 498 308 18 7 474 8 472 2.89e-36 140
MS.gene038263.t1 MTR_3g084540 27.957 372 226 13 126 474 121 473 2.91e-36 140
MS.gene038263.t1 MTR_8g071070 26.121 513 289 16 3 474 5 468 2.92e-36 140
MS.gene038263.t1 MTR_8g466240 27.291 491 289 18 3 471 6 450 5.13e-36 139
MS.gene038263.t1 MTR_6g014240 26.453 499 279 17 2 471 4 443 5.67e-36 139
MS.gene038263.t1 MTR_6g013960 24.558 509 314 15 2 475 7 480 5.82e-36 139
MS.gene038263.t1 MTR_7g011470 26.036 507 291 18 2 475 7 462 5.97e-36 139
MS.gene038263.t1 MTR_7g013200 22.526 475 321 15 7 475 7 440 7.26e-36 138
MS.gene038263.t1 MTR_6g013920 26.938 516 297 19 3 478 8 483 1.09e-35 138
MS.gene038263.t1 MTR_7g080935 23.589 496 307 17 3 476 9 454 1.25e-35 138
MS.gene038263.t1 MTR_2g059240 28.756 386 211 11 115 475 123 469 2.55e-35 137
MS.gene038263.t1 MTR_3g084520 25.714 385 243 12 102 463 97 461 4.47e-35 137
MS.gene038263.t1 MTR_6g011340 26.221 389 233 11 111 475 122 480 6.57e-35 136
MS.gene038263.t1 MTR_5g072860 23.482 494 310 12 6 476 19 467 7.14e-35 136
MS.gene038263.t1 MTR_3g031450 24.426 479 292 12 4 465 17 442 7.84e-35 136
MS.gene038263.t1 MTR_7g013240 24.477 478 299 16 9 473 10 438 9.10e-35 135
MS.gene038263.t1 MTR_8g083280 24.901 506 295 16 5 475 7 462 1.06e-34 135
MS.gene038263.t1 MTR_6g035295 24.655 507 307 15 5 472 12 482 1.11e-34 136
MS.gene038263.t1 MTR_4g128690 25.990 404 251 11 80 474 88 452 1.13e-34 135
MS.gene038263.t1 MTR_6g013990 26.615 387 232 12 111 475 122 478 1.85e-34 135
MS.gene038263.t1 MTR_7g013180 23.045 486 318 16 1 473 1 443 2.27e-34 134
MS.gene038263.t1 MTR_7g039550 35.268 224 132 3 251 471 45 258 4.47e-34 129
MS.gene038263.t1 MTR_7g013220 23.382 479 319 15 7 473 7 449 7.30e-34 133
MS.gene038263.t1 MTR_8g088560 26.283 487 299 15 5 472 10 455 1.08e-33 132
MS.gene038263.t1 MTR_3g031400 23.505 485 307 12 4 475 17 450 2.52e-33 132
MS.gene038263.t1 MTR_8g090095 34.247 219 129 7 261 474 271 479 2.73e-33 132
MS.gene038263.t1 MTR_7g070870 31.310 313 166 8 172 472 181 456 2.86e-33 131
MS.gene038263.t1 MTR_8g032950 26.200 500 304 17 5 472 12 478 4.15e-33 131
MS.gene038263.t1 MTR_3g009490 35.079 191 112 4 287 472 3 186 1.48e-32 122
MS.gene038263.t1 MTR_6g014190 28.115 313 175 9 182 475 6 287 5.40e-32 124
MS.gene038263.t1 MTR_5g004940 31.538 260 131 7 222 477 164 380 5.50e-32 127
MS.gene038263.t1 MTR_0477s0010 26.776 366 201 10 124 475 5 317 1.34e-31 124
MS.gene038263.t1 MTR_5g027210 26.139 417 225 12 115 477 97 484 1.70e-31 127
MS.gene038263.t1 MTR_7g013260 23.958 480 304 16 7 473 8 439 2.19e-31 125
MS.gene038263.t1 MTR_7g470610 35.945 217 117 4 202 408 66 270 3.43e-31 122
MS.gene038263.t1 MTR_7g070583 35.945 217 117 4 202 408 66 270 3.43e-31 122
MS.gene038263.t1 MTR_2086s0010 34.518 197 104 3 285 479 3 176 3.21e-30 116
MS.gene038263.t1 MTR_1996s0010 34.518 197 104 3 285 479 3 176 3.21e-30 116
MS.gene038263.t1 MTR_8g009840 33.636 220 131 4 258 470 310 521 3.97e-29 120
MS.gene038263.t1 MTR_8g007585 31.004 229 132 5 249 475 188 392 7.20e-29 118
MS.gene038263.t1 MTR_8g068340 25.697 502 298 20 2 474 9 464 9.43e-29 119
MS.gene038263.t1 MTR_7g071050 26.151 478 258 20 6 457 14 422 1.96e-28 117
MS.gene038263.t1 MTR_0078s0200 29.063 320 202 11 2 310 3 308 2.43e-28 114
MS.gene038263.t1 MTR_5g098960 24.895 474 282 16 1 452 3 424 3.09e-28 117
MS.gene038263.t1 MTR_4g128720 24.578 415 264 14 69 474 81 455 2.92e-27 114
MS.gene038263.t1 MTR_8g068330 25.845 503 304 21 2 478 5 464 7.50e-27 113
MS.gene038263.t1 MTR_2g014900 25.720 486 299 18 5 471 7 449 1.43e-26 112
MS.gene038263.t1 MTR_7g070760 33.649 211 96 3 206 408 28 202 5.07e-26 105
MS.gene038263.t1 MTR_8g007565 27.426 474 271 18 6 448 8 439 2.14e-25 108
MS.gene038263.t1 MTR_5g072850 29.956 227 114 7 189 406 143 333 2.65e-25 107
MS.gene038263.t1 MTR_8g007650 27.426 474 271 18 6 448 8 439 5.63e-25 107
MS.gene038263.t1 MTR_2g008226 33.188 229 122 7 233 452 242 448 7.04e-25 107
MS.gene038263.t1 MTR_5g066410 26.115 471 262 14 8 448 1 415 7.19e-25 107
MS.gene038263.t1 MTR_7g067120 25.394 508 256 23 2 474 6 425 1.42e-24 106
MS.gene038263.t1 MTR_8g068360 30.078 256 154 9 200 451 210 444 2.77e-24 105
MS.gene038263.t1 MTR_2g046620 30.916 262 146 9 199 451 204 439 3.05e-24 105
MS.gene038263.t1 MTR_6g014185 27.402 281 138 8 205 475 121 345 6.22e-24 103
MS.gene038263.t1 MTR_6g013680 25.707 389 183 15 111 475 69 375 6.28e-24 103
MS.gene038263.t1 MTR_7g070995 40.000 130 74 2 347 472 13 142 1.56e-22 94.4
MS.gene038263.t1 MTR_8g056740 29.450 309 153 13 113 413 55 306 4.68e-22 98.2
MS.gene038263.t1 MTR_6g014160 27.479 353 176 17 111 441 104 398 5.43e-22 98.2
MS.gene038263.t1 MTR_7g067330 25.755 497 278 19 2 479 6 430 5.48e-22 98.6
MS.gene038263.t1 MTR_4g079250 31.068 206 122 4 263 467 261 447 6.92e-22 98.6
MS.gene038263.t1 MTR_2g008220 33.184 223 117 8 238 451 243 442 8.78e-22 98.2
MS.gene038263.t1 MTR_4g079270 28.364 275 167 7 197 467 199 447 1.26e-21 97.8
MS.gene038263.t1 MTR_8g006230 26.033 242 168 6 77 313 18 253 2.10e-21 94.4
MS.gene038263.t1 MTR_4g123553 31.765 255 135 10 208 451 212 438 3.36e-21 96.7
MS.gene038263.t1 MTR_2g008225 32.287 223 119 8 238 451 244 443 3.91e-21 96.3
MS.gene038263.t1 MTR_5g066390 32.000 150 88 2 328 475 78 215 6.21e-21 91.7
MS.gene038263.t1 MTR_0536s0030 37.500 152 84 7 330 472 200 349 9.39e-21 94.0
MS.gene038263.t1 MTR_4g059370 27.083 336 186 12 160 471 85 385 1.26e-20 94.0
MS.gene038263.t1 MTR_6g042310 25.309 486 270 21 1 451 14 441 2.55e-20 94.0
MS.gene038263.t1 MTR_6g014000 32.026 153 86 3 326 476 21 157 4.30e-20 93.2
MS.gene038263.t1 MTR_1g090270 29.464 224 138 6 238 459 241 446 7.38e-20 92.4
MS.gene038263.t1 MTR_4g077960 31.390 223 121 8 238 451 216 415 8.00e-20 92.0
MS.gene038263.t1 MTR_6g036650 32.258 217 116 7 244 451 254 448 2.62e-19 90.9
MS.gene038263.t1 MTR_7g080960 31.210 157 63 1 256 412 320 431 3.58e-19 90.5
MS.gene038263.t1 MTR_6g014186 23.725 510 279 19 2 475 4 439 5.96e-19 89.4
MS.gene038263.t1 MTR_5g090680 95.238 42 2 0 1 42 1 42 6.81e-19 82.8
MS.gene038263.t1 MTR_2g083480 29.231 260 152 9 204 458 206 438 7.12e-19 89.4
MS.gene038263.t1 MTR_2g083430 28.846 260 153 8 204 458 206 438 1.91e-18 88.2
MS.gene038263.t1 MTR_3g435310 32.821 195 106 6 260 451 225 397 1.97e-18 87.8
MS.gene038263.t1 MTR_1g107325 29.310 174 113 3 306 477 190 355 2.48e-18 86.7
MS.gene038263.t1 MTR_3g009500 28.090 267 172 11 1 254 1 260 3.94e-17 81.6
MS.gene038263.t1 MTR_3g009520 24.521 261 170 9 2 245 3 253 3.60e-15 75.9
MS.gene038263.t1 MTR_2g083420 26.437 261 136 9 203 458 205 414 5.35e-14 74.3
MS.gene038263.t1 MTR_6g052375 31.414 191 96 7 173 352 28 194 1.83e-13 71.6
MS.gene038263.t1 MTR_2g083380 23.629 474 297 17 6 458 26 455 7.49e-13 70.9
MS.gene038263.t1 MTR_1g090280 26.042 192 125 4 285 474 135 311 2.55e-12 68.2
MS.gene038263.t1 MTR_0475s0030 48.214 56 29 0 357 412 11 66 7.35e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038263.t1 AT3G21760 44.603 491 251 8 3 479 2 485 9.39e-137 403
MS.gene038263.t1 AT3G21780 42.680 485 257 10 3 479 2 473 2.96e-128 381
MS.gene038263.t1 AT3G21750 41.942 484 260 9 3 478 2 472 4.33e-127 378
MS.gene038263.t1 AT4G15280 43.125 480 262 8 3 476 2 476 1.64e-126 377
MS.gene038263.t1 AT4G15280 43.125 480 262 8 3 476 34 508 2.68e-126 377
MS.gene038263.t1 AT3G21790 41.770 486 268 7 3 478 2 482 9.71e-126 375
MS.gene038263.t1 AT3G21800 39.919 491 272 9 1 479 1 480 1.11e-116 352
MS.gene038263.t1 AT1G07250 40.535 486 256 13 1 471 2 469 2.33e-115 348
MS.gene038263.t1 AT2G29740 41.273 487 251 14 2 472 5 472 2.61e-113 343
MS.gene038263.t1 AT2G29730 40.206 485 250 13 1 471 1 459 2.24e-112 340
MS.gene038263.t1 AT1G07240 38.664 494 268 10 1 476 1 477 4.52e-109 332
MS.gene038263.t1 AT4G15260 44.959 367 189 6 118 479 1 359 6.80e-109 327
MS.gene038263.t1 AT1G07260 39.634 492 257 16 3 476 4 473 1.37e-106 325
MS.gene038263.t1 AT2G29710 39.554 493 255 14 1 477 1 466 3.60e-105 322
MS.gene038263.t1 AT2G29750 39.104 491 269 13 2 479 5 478 1.43e-102 315
MS.gene038263.t1 AT3G16520 32.017 481 294 11 1 472 1 457 1.97e-76 247
MS.gene038263.t1 AT3G16520 31.974 466 282 11 1 457 1 440 4.80e-73 238
MS.gene038263.t1 AT3G16520 31.974 466 282 11 1 457 1 440 6.65e-73 237
MS.gene038263.t1 AT4G01070 33.824 476 285 13 2 467 5 460 1.39e-70 232
MS.gene038263.t1 AT1G01420 33.962 477 280 14 6 470 9 462 1.58e-66 222
MS.gene038263.t1 AT1G01420 33.962 477 280 14 6 470 12 465 1.68e-66 222
MS.gene038263.t1 AT5G66690 32.150 479 279 20 1 461 3 453 1.70e-65 219
MS.gene038263.t1 AT4G36770 33.333 474 258 18 8 457 7 446 4.40e-65 217
MS.gene038263.t1 AT5G26310 31.301 492 285 17 1 470 3 463 6.21e-64 215
MS.gene038263.t1 AT2G18570 30.247 486 293 17 1 467 1 459 3.11e-63 213
MS.gene038263.t1 AT1G01390 33.264 481 281 19 6 471 26 481 1.11e-61 209
MS.gene038263.t1 AT1G01390 33.264 481 281 19 6 471 9 464 1.48e-61 208
MS.gene038263.t1 AT3G50740 30.020 503 302 21 1 478 3 480 7.53e-59 201
MS.gene038263.t1 AT2G15480 29.077 509 296 18 2 477 7 483 1.63e-52 184
MS.gene038263.t1 AT2G15480 28.709 519 295 18 2 477 7 493 3.41e-52 184
MS.gene038263.t1 AT1G22380 28.543 508 293 15 2 475 10 481 1.10e-50 180
MS.gene038263.t1 AT5G12890 29.883 512 296 22 2 480 7 488 2.39e-50 179
MS.gene038263.t1 AT1G78270 28.516 519 281 22 2 476 10 482 2.59e-50 179
MS.gene038263.t1 AT3G46670 29.713 488 275 19 6 474 10 448 2.70e-49 175
MS.gene038263.t1 AT2G18560 30.203 394 236 13 88 467 1 369 3.32e-49 173
MS.gene038263.t1 AT2G15490 29.528 508 287 17 6 477 8 480 1.00e-48 174
MS.gene038263.t1 AT2G15490 29.331 508 291 17 6 477 8 483 2.90e-48 173
MS.gene038263.t1 AT1G22340 27.202 511 295 13 2 474 10 481 2.19e-47 171
MS.gene038263.t1 AT4G34131 29.159 511 282 18 2 472 7 477 4.21e-47 170
MS.gene038263.t1 AT2G36770 27.219 507 308 19 7 480 16 494 2.21e-46 168
MS.gene038263.t1 AT2G36760 26.916 509 307 16 7 480 16 494 2.82e-46 168
MS.gene038263.t1 AT1G22360 27.105 487 279 13 2 455 7 450 4.89e-46 167
MS.gene038263.t1 AT5G59590 26.971 482 302 14 1 472 6 447 4.90e-46 166
MS.gene038263.t1 AT5G59580 28.274 481 292 17 3 472 7 445 5.68e-46 166
MS.gene038263.t1 AT1G22400 29.314 481 266 17 2 448 10 450 1.34e-45 166
MS.gene038263.t1 AT2G36750 27.510 498 309 16 7 476 12 485 2.28e-45 165
MS.gene038263.t1 AT3G46660 28.337 487 291 18 3 474 12 455 2.75e-45 164
MS.gene038263.t1 AT2G36780 27.400 500 308 17 7 476 16 490 2.90e-45 165
MS.gene038263.t1 AT5G38010 29.039 489 289 17 2 474 7 453 1.57e-44 162
MS.gene038263.t1 AT4G34135 29.565 460 273 15 2 436 8 441 1.86e-44 163
MS.gene038263.t1 AT1G22360 27.329 483 277 14 2 451 7 448 2.03e-44 162
MS.gene038263.t1 AT2G36800 26.494 502 309 15 7 475 14 488 2.63e-44 162
MS.gene038263.t1 AT1G22370 30.735 449 233 17 2 410 10 420 3.25e-44 162
MS.gene038263.t1 AT3G53160 27.470 506 308 17 7 480 10 488 1.01e-43 161
MS.gene038263.t1 AT4G34138 27.530 494 308 16 3 472 9 476 1.61e-43 160
MS.gene038263.t1 AT2G36790 27.888 502 303 15 7 476 15 489 1.23e-42 158
MS.gene038263.t1 AT3G46690 28.512 484 297 18 1 474 5 449 2.19e-42 156
MS.gene038263.t1 AT3G46700 27.950 483 296 16 1 474 5 444 6.49e-42 155
MS.gene038263.t1 AT3G46650 26.915 483 288 15 3 476 8 434 9.39e-42 154
MS.gene038263.t1 AT4G15490 24.655 507 309 16 2 477 5 469 1.21e-40 152
MS.gene038263.t1 AT4G15500 26.250 400 244 10 96 476 97 464 3.13e-40 151
MS.gene038263.t1 AT5G38040 28.266 467 285 16 15 471 20 446 3.27e-40 150
MS.gene038263.t1 AT3G55700 30.820 305 176 7 179 476 176 452 3.32e-40 150
MS.gene038263.t1 AT5G14860 29.515 515 263 25 7 472 10 473 4.25e-40 151
MS.gene038263.t1 AT3G11340 27.593 482 299 17 3 476 7 446 1.63e-39 148
MS.gene038263.t1 AT2G30140 24.797 492 297 13 6 476 14 453 6.17e-39 147
MS.gene038263.t1 AT2G31790 27.178 482 290 15 2 463 5 445 7.79e-39 147
MS.gene038263.t1 AT3G55710 26.494 502 292 15 2 476 5 456 1.35e-38 146
MS.gene038263.t1 AT2G30140 25.051 487 301 15 6 476 14 452 1.98e-38 145
MS.gene038263.t1 AT3G53150 26.654 529 304 19 2 479 19 514 2.40e-38 146
MS.gene038263.t1 AT1G05680 24.795 488 288 17 4 463 5 441 3.52e-38 145
MS.gene038263.t1 AT3G21560 25.344 509 287 18 6 472 13 470 8.18e-38 145
MS.gene038263.t1 AT2G30150 26.124 467 297 13 6 463 14 441 8.47e-38 144
MS.gene038263.t1 AT3G46680 26.294 483 307 17 2 474 6 449 1.57e-37 143
MS.gene038263.t1 AT2G23250 33.115 305 165 10 182 474 158 435 2.19e-37 142
MS.gene038263.t1 AT4G15270 35.648 216 121 5 3 207 2 210 2.20e-37 137
MS.gene038263.t1 AT4G15270 36.000 225 134 6 3 220 2 223 2.33e-37 139
MS.gene038263.t1 AT2G30150 25.862 464 296 13 9 463 1 425 5.86e-37 141
MS.gene038263.t1 AT1G05675 23.829 491 289 15 4 463 5 441 6.92e-37 141
MS.gene038263.t1 AT4G15550 28.684 380 240 12 105 475 117 474 8.32e-37 141
MS.gene038263.t1 AT4G01070 31.686 344 216 9 2 338 5 336 8.84e-37 139
MS.gene038263.t1 AT2G16890 27.397 511 289 20 6 480 10 474 2.13e-36 140
MS.gene038263.t1 AT2G43820 26.358 497 294 19 2 477 4 449 2.52e-36 140
MS.gene038263.t1 AT1G51210 27.195 467 268 16 3 449 18 432 2.61e-36 139
MS.gene038263.t1 AT2G23260 33.119 311 162 10 182 474 171 453 4.89e-36 139
MS.gene038263.t1 AT5G17050 27.427 412 246 12 79 476 86 458 1.07e-35 138
MS.gene038263.t1 AT2G31750 24.486 486 294 14 3 463 6 443 1.27e-35 138
MS.gene038263.t1 AT5G03490 27.181 493 287 17 2 471 16 459 1.30e-35 138
MS.gene038263.t1 AT2G31750 24.152 501 307 15 3 478 6 458 1.40e-35 138
MS.gene038263.t1 AT2G36970 28.881 277 168 7 205 478 224 474 2.67e-35 137
MS.gene038263.t1 AT1G73880 25.247 507 296 17 3 476 12 468 3.26e-35 137
MS.gene038263.t1 AT1G22370 35.000 260 124 9 173 410 14 250 3.27e-35 133
MS.gene038263.t1 AT4G15480 26.943 386 234 12 97 463 111 467 4.20e-35 137
MS.gene038263.t1 AT5G05870 31.615 291 163 9 192 474 192 454 4.49e-35 136
MS.gene038263.t1 AT4G15270 36.139 202 111 5 3 193 2 196 5.04e-35 130
MS.gene038263.t1 AT1G05560 25.684 475 294 17 7 463 7 440 2.78e-34 134
MS.gene038263.t1 AT1G05560 25.684 475 294 17 7 463 57 490 3.90e-34 135
MS.gene038263.t1 AT1G24100 24.558 509 288 16 3 474 9 458 2.79e-33 131
MS.gene038263.t1 AT3G02100 23.123 506 312 13 1 479 9 464 7.99e-33 130
MS.gene038263.t1 AT3G46720 26.763 482 297 16 2 474 6 440 2.30e-32 129
MS.gene038263.t1 AT5G17030 26.290 407 258 10 80 476 83 457 5.34e-32 127
MS.gene038263.t1 AT5G37950 32.852 277 165 10 110 381 82 342 1.48e-31 124
MS.gene038263.t1 AT2G16890 27.506 429 254 15 6 410 10 405 2.04e-31 125
MS.gene038263.t1 AT2G28080 26.161 409 251 10 85 478 103 475 2.17e-31 126
MS.gene038263.t1 AT5G05880 25.506 494 291 18 5 474 8 448 2.90e-31 125
MS.gene038263.t1 AT2G43840 26.626 492 291 19 3 474 5 446 4.47e-31 125
MS.gene038263.t1 AT1G10400 25.631 515 291 20 1 476 3 464 1.54e-30 124
MS.gene038263.t1 AT2G43840 26.423 492 292 19 3 474 5 446 1.63e-30 123
MS.gene038263.t1 AT1G30530 25.442 452 278 13 40 475 43 451 1.92e-30 123
MS.gene038263.t1 AT5G37950 32.246 276 162 10 110 381 82 336 3.05e-30 120
MS.gene038263.t1 AT1G06000 31.373 306 175 10 180 471 146 430 3.72e-30 122
MS.gene038263.t1 AT5G54010 26.210 496 298 18 3 480 4 449 7.47e-30 121
MS.gene038263.t1 AT4G14090 29.282 362 204 16 126 472 129 453 1.05e-29 121
MS.gene038263.t1 AT5G17040 25.055 455 275 12 40 476 35 441 1.06e-28 118
MS.gene038263.t1 AT5G05860 28.819 288 176 7 192 475 186 448 1.86e-28 117
MS.gene038263.t1 AT3G22250 24.291 494 304 17 2 467 5 456 2.02e-28 117
MS.gene038263.t1 AT1G05530 24.224 483 306 17 1 463 1 443 8.67e-28 115
MS.gene038263.t1 AT3G29630 24.590 488 309 14 3 478 4 444 1.60e-27 115
MS.gene038263.t1 AT4G27560 30.249 281 169 6 202 480 194 449 2.39e-27 114
MS.gene038263.t1 AT5G05890 29.474 285 172 8 194 474 193 452 4.23e-27 114
MS.gene038263.t1 AT2G26480 25.651 499 297 21 1 478 4 449 5.89e-27 113
MS.gene038263.t1 AT5G17040 26.608 342 199 7 150 476 35 339 8.73e-27 111
MS.gene038263.t1 AT4G27570 29.181 281 172 6 202 480 194 449 1.25e-26 112
MS.gene038263.t1 AT1G64910 32.787 244 142 6 238 480 221 443 4.99e-26 110
MS.gene038263.t1 AT5G65550 23.930 514 300 18 3 480 7 465 8.53e-26 110
MS.gene038263.t1 AT5G49690 32.824 262 133 11 199 451 205 432 8.64e-26 110
MS.gene038263.t1 AT5G05900 25.208 480 307 18 6 474 9 447 1.43e-25 109
MS.gene038263.t1 AT5G53990 28.571 287 180 7 195 480 181 443 4.70e-25 107
MS.gene038263.t1 AT1G64920 29.655 290 175 8 195 479 181 446 1.48e-24 106
MS.gene038263.t1 AT1G50580 26.423 492 297 17 3 480 4 444 3.03e-24 105
MS.gene038263.t1 AT5G54060 25.510 490 295 19 6 470 14 458 3.81e-24 105
MS.gene038263.t1 AT3G29630 29.956 227 140 3 253 478 210 418 1.12e-23 103
MS.gene038263.t1 AT2G22930 27.599 279 177 6 195 472 181 435 5.49e-23 101
MS.gene038263.t1 AT2G22590 25.207 484 276 19 3 450 13 446 7.56e-22 98.6
MS.gene038263.t1 AT4G09500 27.305 282 174 9 195 472 181 435 4.63e-20 92.8
MS.gene038263.t1 AT4G09500 29.268 205 125 4 269 472 225 410 9.51e-18 85.9
MS.gene038263.t1 AT4G34135 26.301 346 204 13 2 316 8 333 1.94e-17 84.0

Find 140 sgRNAs with CRISPR-Local

Find 158 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATCGGTGCCCTTAGTTT+TGG 0.201099 5.4:-71561440 None:intergenic
TGATTACCCTCTTTCTGATT+TGG 0.246281 5.4:+71561651 MS.gene038263:CDS
TTTGGGCTCAGGGTTTAATA+AGG 0.271945 5.4:-71561422 None:intergenic
GCACATGCTATTGAGAATTC+TGG 0.281716 5.4:+71561568 MS.gene038263:CDS
TGGCTGGATGAGCTAGTATT+TGG 0.287763 5.4:-71561747 None:intergenic
GGAGATTGCTTTGGATTATA+AGG 0.288776 5.4:+71561909 MS.gene038263:CDS
CCCTCTTTCTGATTTGGAAT+TGG 0.289233 5.4:+71561657 MS.gene038263:CDS
ACGGGGATTGGAAGGGTAAT+TGG 0.290336 5.4:+71561709 MS.gene038263:CDS
AGCTAGTATTTGGGCCTGTT+GGG 0.304204 5.4:-71561737 None:intergenic
ACACTCGAGAGCATATATTT+TGG 0.306166 5.4:+71561805 MS.gene038263:CDS
CAGAACGTGGTTCAGTGTTT+GGG 0.310962 5.4:-71560919 None:intergenic
CGCAGGGACGGAAAATTCTT+TGG 0.311860 5.4:-71561074 None:intergenic
TTTCATGCTACAAAAGGAAT+TGG 0.327048 5.4:+71561255 MS.gene038263:CDS
ACAGAACGTGGTTCAGTGTT+TGG 0.332969 5.4:-71560920 None:intergenic
GCGCTCATCTTCTTCACTTC+CGG 0.333229 5.4:+71561094 MS.gene038263:CDS
ACAAGATTGAGAAAGGAATA+AGG 0.346991 5.4:+71561971 MS.gene038263:CDS
TAGATCAGGATGAGAGAAAA+AGG 0.347511 5.4:-71561371 None:intergenic
AAACTGGGCAACGAGTTAAT+TGG 0.349725 5.4:-71561235 None:intergenic
TCCTGATCTAGCAGAATTAC+TGG 0.357798 5.4:+71561384 MS.gene038263:CDS
TTCAAATGAGTTCACTATAA+TGG 0.359717 5.4:-71561323 None:intergenic
TTAGATCGAACGACGGGGAT+TGG 0.368251 5.4:+71561697 MS.gene038263:CDS
GGCTGGATGAGCTAGTATTT+GGG 0.379195 5.4:-71561746 None:intergenic
GATTGATTATATTATGAATC+GGG 0.381776 5.4:+71562104 MS.gene038263:CDS
TCAGCAGTTACAAGATAGTT+AGG 0.390098 5.4:-71561949 None:intergenic
GTTCGATCTAAGAATCCTTC+AGG 0.390486 5.4:-71561685 None:intergenic
TAGAGTGGCCACGCGGCAAT+AGG 0.396729 5.4:-71561832 None:intergenic
ACTTCCGGTGTTGCTTTCCT+TGG 0.398776 5.4:+71561109 MS.gene038263:CDS
GAGACGGCTTGTTTGACGTT+TGG 0.399431 5.4:-71560971 None:intergenic
GGAATCGGGTTGGCAAAACT+TGG 0.400105 5.4:-71561214 None:intergenic
TTGATGTGTGAGCTGAAAAT+AGG 0.401593 5.4:+71561883 MS.gene038263:CDS
GCCACTCTATGCTGAGCAAC+AGG 0.411377 5.4:+71561846 MS.gene038263:CDS
GAGCTAGTATTTGGGCCTGT+TGG 0.413330 5.4:-71561738 None:intergenic
TGGATAAAGATGGAGAATTC+AGG 0.418083 5.4:+71562001 MS.gene038263:CDS
CGTTTGGTTTCTGAGCTTCA+AGG 0.419890 5.4:-71560955 None:intergenic
TCCCATTTCCGATTCTCTCC+AGG 0.420163 5.4:+71560868 MS.gene038263:CDS
GGCAACGAGTTAATTGGAAT+CGG 0.420896 5.4:-71561229 None:intergenic
TGATTGATTATATTATGAAT+CGG 0.422035 5.4:+71562103 MS.gene038263:CDS
TTATGACTAAGACAGTTATT+CGG 0.426306 5.4:-71560796 None:intergenic
GGGCTCTTTCGATGAGGATC+AGG 0.428146 5.4:+71561534 MS.gene038263:CDS
ACCAATTCCAAATCAGAAAG+AGG 0.429693 5.4:-71561658 None:intergenic
TTCTTTGGCAATATCAATCA+TGG 0.429997 5.4:-71561059 None:intergenic
TTGGGCTCAGGGTTTAATAA+GGG 0.433935 5.4:-71561421 None:intergenic
GGTAATTGGATGGGCCCAAC+AGG 0.437520 5.4:+71561723 MS.gene038263:CDS
GACCTGGAGAGAATCGGAAA+TGG 0.441659 5.4:-71560870 None:intergenic
AATAGGTGTGGAGATTGCTT+TGG 0.444878 5.4:+71561900 MS.gene038263:CDS
ATTTGCTTTCTTGACGCCAC+TGG 0.449685 5.4:-71561299 None:intergenic
AAACCCTGAGCCCAAAACTA+AGG 0.454480 5.4:+71561429 MS.gene038263:CDS
ACCAGTAATTCTGCTAGATC+AGG 0.457970 5.4:-71561385 None:intergenic
ATCGAACGACGGGGATTGGA+AGG 0.460346 5.4:+71561701 MS.gene038263:CDS
TATAAGGTGGGGTTTAATGA+AGG 0.461572 5.4:+71561925 MS.gene038263:CDS
GCCCAGTTTCATGCTACAAA+AGG 0.466725 5.4:+71561249 MS.gene038263:CDS
TGCGCAGAGACCACACAAAA+CGG 0.468632 5.4:-71561594 None:intergenic
GGATCTTCCTACACTTACTT+AGG 0.482214 5.4:+71562075 MS.gene038263:CDS
ATTGCTTTGGATTATAAGGT+GGG 0.483700 5.4:+71561913 MS.gene038263:CDS
ACCTGGAGAGAATCGGAAAT+GGG 0.489579 5.4:-71560869 None:intergenic
GCGCAGAGACCACACAAAAC+GGG 0.495599 5.4:-71561593 None:intergenic
AGGAGTGTGTTGGATAAAGA+TGG 0.496217 5.4:+71561991 MS.gene038263:CDS
ACCATGATGCCCTTCGGTGA+GGG 0.501148 5.4:-71561619 None:intergenic
GGATTCTTAGATCGAACGAC+GGG 0.503118 5.4:+71561691 MS.gene038263:CDS
TCCTTCTCTAGTAGTGAGGT+TGG 0.510324 5.4:-71560993 None:intergenic
GCAACGAGTTAATTGGAATC+GGG 0.514414 5.4:-71561228 None:intergenic
GATTTGTTTCGCATTGTGGT+TGG 0.515433 5.4:+71561776 MS.gene038263:CDS
GTTGATGACCTGGAGAGAAT+CGG 0.518934 5.4:-71560876 None:intergenic
GTTCAAGCAGAGTGTGAAGA+TGG 0.521506 5.4:-71561141 None:intergenic
TTAGAAGCTTCGCGAATTCG+AGG 0.527180 5.4:-71560754 None:intergenic
GATTGCTTTGGATTATAAGG+TGG 0.528562 5.4:+71561912 MS.gene038263:CDS
GGTGAAACCATGATGCCCTT+CGG 0.529852 5.4:-71561625 None:intergenic
GAAACAAATCCTCCAGTGGC+TGG 0.533755 5.4:-71561763 None:intergenic
TCTAGTAGTGAGGTTGGAGA+CGG 0.537230 5.4:-71560987 None:intergenic
TCTGCGCAAACCCTCACCGA+AGG 0.539466 5.4:+71561609 MS.gene038263:CDS
ACTGCTGACAAGATTGAGAA+AGG 0.544496 5.4:+71561964 MS.gene038263:CDS
AGAACGTGGTTCAGTGTTTG+GGG 0.545873 5.4:-71560918 None:intergenic
GGATTGGAAGGGTAATTGGA+TGG 0.546176 5.4:+71561713 MS.gene038263:CDS
GGAGGATTTGTTTCGCATTG+TGG 0.546704 5.4:+71561772 MS.gene038263:CDS
GGGTTTAATAAGGGTCCCAC+TGG 0.547616 5.4:-71561412 None:intergenic
CGAGTTAATTGGAATCGGGT+TGG 0.548103 5.4:-71561224 None:intergenic
ATTATCCCTTCACCTGGTGT+AGG 0.549218 5.4:+71560716 MS.gene038263:CDS
CAAGATGAAGAAAGCAGAAG+TGG 0.549730 5.4:+71560691 None:intergenic
GAAGTGAAGAAGATGAGCGC+AGG 0.550929 5.4:-71561091 None:intergenic
GAATCGGGTTGGCAAAACTT+GGG 0.553759 5.4:-71561213 None:intergenic
ATACTAGCTCATCCAGCCAC+TGG 0.555877 5.4:+71561751 MS.gene038263:CDS
TAGAAGCTTCGCGAATTCGA+GGG 0.560015 5.4:-71560753 None:intergenic
GAAAGGAATAAGGAGTGTGT+TGG 0.560047 5.4:+71561981 MS.gene038263:CDS
GGAGAGAATCGGAAATGGGA+AGG 0.560248 5.4:-71560865 None:intergenic
ACCCTCACCGAAGGGCATCA+TGG 0.561573 5.4:+71561618 MS.gene038263:CDS
CTAAGACAGTTATTCGGAGG+TGG 0.562228 5.4:-71560790 None:intergenic
TTATTCGGAGGTGGTTATCA+CGG 0.566301 5.4:-71560781 None:intergenic
CGGGTTGGCAAAACTTGGGA+TGG 0.570598 5.4:-71561209 None:intergenic
GATTGGAAGGGTAATTGGAT+GGG 0.574752 5.4:+71561714 MS.gene038263:CDS
ATTCTGGAAGGTTGATGACC+TGG 0.574771 5.4:-71560886 None:intergenic
GAAGAAGATGAGCGCAGGGA+CGG 0.576506 5.4:-71561086 None:intergenic
TTTCTCTGCTTCGGGAGCAG+GGG 0.576927 5.4:+71561514 MS.gene038263:CDS
ATAAGGTGGGGTTTAATGAA+GGG 0.577206 5.4:+71561926 MS.gene038263:CDS
TCGAACGACGGGGATTGGAA+GGG 0.582530 5.4:+71561702 MS.gene038263:CDS
TCCAACCTCACTACTAGAGA+AGG 0.584554 5.4:+71560992 MS.gene038263:CDS
AACCCTGAGCCCAAAACTAA+GGG 0.585260 5.4:+71561430 MS.gene038263:CDS
CATACCAAGGAAAGCAACAC+CGG 0.587607 5.4:-71561113 None:intergenic
GAGAGAATCGGAAATGGGAA+GGG 0.587790 5.4:-71560864 None:intergenic
GATGATATCATCAGACTCAT+CGG 0.591691 5.4:-71561455 None:intergenic
CATCGTCATCTGTGGTGTGT+GGG 0.594873 5.4:-71560823 None:intergenic
AAGCTTCGCGAATTCGAGGG+TGG 0.595637 5.4:-71560750 None:intergenic
CCAATTCCAAATCAGAAAGA+GGG 0.599051 5.4:-71561657 None:intergenic
AAGTGAAGAAGATGAGCGCA+GGG 0.604104 5.4:-71561090 None:intergenic
CATGTCCTTCTCTAGTAGTG+AGG 0.610194 5.4:-71560997 None:intergenic
CTGCGCAAACCCTCACCGAA+GGG 0.611184 5.4:+71561610 MS.gene038263:CDS
AGATGACCTACACCAGGTGA+AGG 0.612932 5.4:-71560722 None:intergenic
GAATTACTGGTATATCCAGT+GGG 0.614466 5.4:+71561397 MS.gene038263:CDS
CTAGCTCATCCAGCCACTGG+AGG 0.615888 5.4:+71561754 MS.gene038263:CDS
GGGGAAGAGAACATTCTGGA+AGG 0.616011 5.4:-71560898 None:intergenic
TGACTAAGACAGTTATTCGG+AGG 0.616136 5.4:-71560793 None:intergenic
GCCTGTTGCTCAGCATAGAG+TGG 0.616657 5.4:-71561847 None:intergenic
TCAGAAAGAGGGTAATCAGA+GGG 0.619200 5.4:-71561646 None:intergenic
ACATCGTCATCTGTGGTGTG+TGG 0.622489 5.4:-71560824 None:intergenic
AGAATTACTGGTATATCCAG+TGG 0.625918 5.4:+71561396 MS.gene038263:CDS
AACCATGATGCCCTTCGGTG+AGG 0.626599 5.4:-71561620 None:intergenic
CTCACTACTAGAGAAGGACA+TGG 0.627122 5.4:+71560998 MS.gene038263:CDS
GTGGTGATTATCCCTTCACC+TGG 0.627475 5.4:+71560710 MS.gene038263:CDS
GACATCCACATCGTCATCTG+TGG 0.628395 5.4:-71560831 None:intergenic
CAAACGACCTAAGTAAGTGT+AGG 0.629998 5.4:-71562082 None:intergenic
GATGACCTACACCAGGTGAA+GGG 0.631554 5.4:-71560721 None:intergenic
TTGCTTTGGATTATAAGGTG+GGG 0.638895 5.4:+71561914 MS.gene038263:CDS
GAGCAGGGGCTCTTTCGATG+AGG 0.653670 5.4:+71561528 MS.gene038263:CDS
TAAGTTGCTGCAGCAGAACG+AGG 0.656170 5.4:+71561183 MS.gene038263:CDS
ATCAGAAAGAGGGTAATCAG+AGG 0.659383 5.4:-71561647 None:intergenic
AGTCTGATGATATCATCAAG+TGG 0.664178 5.4:+71561461 MS.gene038263:CDS
GTGTGAGCTGAAAATAGGTG+TGG 0.670560 5.4:+71561888 MS.gene038263:CDS
CTCAGCATAGAGTGGCCACG+CGG 0.675818 5.4:-71561839 None:intergenic
GAACGTGGTTCAGTGTTTGG+GGG 0.676723 5.4:-71560917 None:intergenic
AGAGCGTTCATGACAGAACG+TGG 0.677391 5.4:-71560932 None:intergenic
ATGCGAAACAAATCCTCCAG+TGG 0.678028 5.4:-71561767 None:intergenic
TGAAGAGTTAGAATCGCATG+CGG 0.681527 5.4:+71561342 MS.gene038263:CDS
AGGATTCTTAGATCGAACGA+CGG 0.683422 5.4:+71561690 MS.gene038263:CDS
GAAACAAGATGACCTACACC+AGG 0.690233 5.4:-71560728 None:intergenic
GCAGAACATGTCAACAACGA+AGG 0.691669 5.4:-71561032 None:intergenic
TTTGGCAATATCAATCATGG+TGG 0.713934 5.4:-71561056 None:intergenic
GAAGATGGAGCATCATACCA+AGG 0.715762 5.4:-71561126 None:intergenic
ACACACCACAGATGACGATG+TGG 0.717509 5.4:+71560826 MS.gene038263:CDS
GATTCTTAGATCGAACGACG+GGG 0.718922 5.4:+71561692 MS.gene038263:CDS
TGTCAACAACGAAGGCAGCG+AGG 0.748241 5.4:-71561024 None:intergenic
TTGGTGTGCCTATTGCCGCG+TGG 0.783717 5.4:+71561824 MS.gene038263:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATTGATTATATTATGAAT+CGG + chr5.4:71562103-71562122 MS.gene038263:CDS 15.0%
!! GATTGATTATATTATGAATC+GGG + chr5.4:71562104-71562123 MS.gene038263:CDS 20.0%
! AGTAAAAAGACTTTGTTAGA+GGG + chr5.4:71562051-71562070 MS.gene038263:CDS 25.0%
! TTATGACTAAGACAGTTATT+CGG - chr5.4:71560799-71560818 None:intergenic 25.0%
! TTCAAATGAGTTCACTATAA+TGG - chr5.4:71561326-71561345 None:intergenic 25.0%
ACAAGATTGAGAAAGGAATA+AGG + chr5.4:71561971-71561990 MS.gene038263:CDS 30.0%
GAGTAAAAAGACTTTGTTAG+AGG + chr5.4:71562050-71562069 MS.gene038263:CDS 30.0%
TTCTTTGGCAATATCAATCA+TGG - chr5.4:71561062-71561081 None:intergenic 30.0%
TTTCATGCTACAAAAGGAAT+TGG + chr5.4:71561255-71561274 MS.gene038263:CDS 30.0%
! ATTGCTTTGGATTATAAGGT+GGG + chr5.4:71561913-71561932 MS.gene038263:CDS 30.0%
AAAAAGACTTTGTTAGAGGG+TGG + chr5.4:71562054-71562073 MS.gene038263:CDS 35.0%
ACCAATTCCAAATCAGAAAG+AGG - chr5.4:71561661-71561680 None:intergenic 35.0%
AGAATTACTGGTATATCCAG+TGG + chr5.4:71561396-71561415 MS.gene038263:CDS 35.0%
AGTCTGATGATATCATCAAG+TGG + chr5.4:71561461-71561480 MS.gene038263:CDS 35.0%
ATAAGGTGGGGTTTAATGAA+GGG + chr5.4:71561926-71561945 MS.gene038263:CDS 35.0%
CCAATTCCAAATCAGAAAGA+GGG - chr5.4:71561660-71561679 None:intergenic 35.0%
GAATTACTGGTATATCCAGT+GGG + chr5.4:71561397-71561416 MS.gene038263:CDS 35.0%
GATGATATCATCAGACTCAT+CGG - chr5.4:71561458-71561477 None:intergenic 35.0%
TAGATCAGGATGAGAGAAAA+AGG - chr5.4:71561374-71561393 None:intergenic 35.0%
TATAAGGTGGGGTTTAATGA+AGG + chr5.4:71561925-71561944 MS.gene038263:CDS 35.0%
TCAGCAGTTACAAGATAGTT+AGG - chr5.4:71561952-71561971 None:intergenic 35.0%
TGATTACCCTCTTTCTGATT+TGG + chr5.4:71561651-71561670 MS.gene038263:CDS 35.0%
TGGATAAAGATGGAGAATTC+AGG + chr5.4:71562001-71562020 MS.gene038263:CDS 35.0%
TTGATGTGTGAGCTGAAAAT+AGG + chr5.4:71561883-71561902 MS.gene038263:CDS 35.0%
TTTGGCAATATCAATCATGG+TGG - chr5.4:71561059-71561078 None:intergenic 35.0%
! GATTGCTTTGGATTATAAGG+TGG + chr5.4:71561912-71561931 MS.gene038263:CDS 35.0%
! GGAGATTGCTTTGGATTATA+AGG + chr5.4:71561909-71561928 MS.gene038263:CDS 35.0%
! TCAGTAGTTTTTCTCTGCTT+CGG + chr5.4:71561505-71561524 MS.gene038263:CDS 35.0%
! TCCTTTTGTAGCATGAAACT+GGG - chr5.4:71561253-71561272 None:intergenic 35.0%
! TTCCTTTTGTAGCATGAAAC+TGG - chr5.4:71561254-71561273 None:intergenic 35.0%
! TTGCTTTGGATTATAAGGTG+GGG + chr5.4:71561914-71561933 MS.gene038263:CDS 35.0%
! TTTTTCATGAACTTTGCCAG+TGG + chr5.4:71561283-71561302 MS.gene038263:CDS 35.0%
!! ACACTCGAGAGCATATATTT+TGG + chr5.4:71561805-71561824 MS.gene038263:CDS 35.0%
!!! TTGGAATTGGTTTTACCTGA+AGG + chr5.4:71561670-71561689 MS.gene038263:CDS 35.0%
AAACTGGGCAACGAGTTAAT+TGG - chr5.4:71561238-71561257 None:intergenic 40.0%
AATAGGTGTGGAGATTGCTT+TGG + chr5.4:71561900-71561919 MS.gene038263:CDS 40.0%
ACCAGTAATTCTGCTAGATC+AGG - chr5.4:71561388-71561407 None:intergenic 40.0%
ACTGCTGACAAGATTGAGAA+AGG + chr5.4:71561964-71561983 MS.gene038263:CDS 40.0%
AGAAAAACTACTGAGGAAGG+AGG - chr5.4:71561499-71561518 None:intergenic 40.0%
AGGATTCTTAGATCGAACGA+CGG + chr5.4:71561690-71561709 MS.gene038263:CDS 40.0%
ATCAGAAAGAGGGTAATCAG+AGG - chr5.4:71561650-71561669 None:intergenic 40.0%
CAAACGACCTAAGTAAGTGT+AGG - chr5.4:71562085-71562104 None:intergenic 40.0%
CAGAGAAAAACTACTGAGGA+AGG - chr5.4:71561502-71561521 None:intergenic 40.0%
GAAGCAGAGAAAAACTACTG+AGG - chr5.4:71561506-71561525 None:intergenic 40.0%
GATTGGAAGGGTAATTGGAT+GGG + chr5.4:71561714-71561733 MS.gene038263:CDS 40.0%
GCAACGAGTTAATTGGAATC+GGG - chr5.4:71561231-71561250 None:intergenic 40.0%
GCACATGCTATTGAGAATTC+TGG + chr5.4:71561568-71561587 MS.gene038263:CDS 40.0%
GGATCTTCCTACACTTACTT+AGG + chr5.4:71562075-71562094 MS.gene038263:CDS 40.0%
GGCAACGAGTTAATTGGAAT+CGG - chr5.4:71561232-71561251 None:intergenic 40.0%
GTTCGATCTAAGAATCCTTC+AGG - chr5.4:71561688-71561707 None:intergenic 40.0%
TCAGAAAGAGGGTAATCAGA+GGG - chr5.4:71561649-71561668 None:intergenic 40.0%
TCCTGATCTAGCAGAATTAC+TGG + chr5.4:71561384-71561403 MS.gene038263:CDS 40.0%
TGAAGAGTTAGAATCGCATG+CGG + chr5.4:71561342-71561361 MS.gene038263:CDS 40.0%
TGACTAAGACAGTTATTCGG+AGG - chr5.4:71560796-71560815 None:intergenic 40.0%
TTATTCGGAGGTGGTTATCA+CGG - chr5.4:71560784-71560803 None:intergenic 40.0%
TTGGGCTCAGGGTTTAATAA+GGG - chr5.4:71561424-71561443 None:intergenic 40.0%
TTTGGGCTCAGGGTTTAATA+AGG - chr5.4:71561425-71561444 None:intergenic 40.0%
! AGGAGTGTGTTGGATAAAGA+TGG + chr5.4:71561991-71562010 MS.gene038263:CDS 40.0%
! CAGTAGTTTTTCTCTGCTTC+GGG + chr5.4:71561506-71561525 MS.gene038263:CDS 40.0%
! GAAAGGAATAAGGAGTGTGT+TGG + chr5.4:71561981-71562000 MS.gene038263:CDS 40.0%
! GATTTGTTTCGCATTGTGGT+TGG + chr5.4:71561776-71561795 MS.gene038263:CDS 40.0%
!! CCCTCTTTCTGATTTGGAAT+TGG + chr5.4:71561657-71561676 MS.gene038263:CDS 40.0%
AAACCCTGAGCCCAAAACTA+AGG + chr5.4:71561429-71561448 MS.gene038263:CDS 45.0%
AACCCTGAGCCCAAAACTAA+GGG + chr5.4:71561430-71561449 MS.gene038263:CDS 45.0%
AAGTGAAGAAGATGAGCGCA+GGG - chr5.4:71561093-71561112 None:intergenic 45.0%
ACAGAACGTGGTTCAGTGTT+TGG - chr5.4:71560923-71560942 None:intergenic 45.0%
ACCTGGAGAGAATCGGAAAT+GGG - chr5.4:71560872-71560891 None:intergenic 45.0%
AGAACGTGGTTCAGTGTTTG+GGG - chr5.4:71560921-71560940 None:intergenic 45.0%
AGCTAGTATTTGGGCCTGTT+GGG - chr5.4:71561740-71561759 None:intergenic 45.0%
ATGCGAAACAAATCCTCCAG+TGG - chr5.4:71561770-71561789 None:intergenic 45.0%
ATTATCCCTTCACCTGGTGT+AGG + chr5.4:71560716-71560735 MS.gene038263:CDS 45.0%
ATTTGCTTTCTTGACGCCAC+TGG - chr5.4:71561302-71561321 None:intergenic 45.0%
CAGAACGTGGTTCAGTGTTT+GGG - chr5.4:71560922-71560941 None:intergenic 45.0%
CATACCAAGGAAAGCAACAC+CGG - chr5.4:71561116-71561135 None:intergenic 45.0%
CATGTCCTTCTCTAGTAGTG+AGG - chr5.4:71561000-71561019 None:intergenic 45.0%
CGAGTTAATTGGAATCGGGT+TGG - chr5.4:71561227-71561246 None:intergenic 45.0%
CTAAGACAGTTATTCGGAGG+TGG - chr5.4:71560793-71560812 None:intergenic 45.0%
CTCACTACTAGAGAAGGACA+TGG + chr5.4:71560998-71561017 MS.gene038263:CDS 45.0%
GAAACAAGATGACCTACACC+AGG - chr5.4:71560731-71560750 None:intergenic 45.0%
GAGAGAATCGGAAATGGGAA+GGG - chr5.4:71560867-71560886 None:intergenic 45.0%
GATTCTTAGATCGAACGACG+GGG + chr5.4:71561692-71561711 MS.gene038263:CDS 45.0%
GCAGAACATGTCAACAACGA+AGG - chr5.4:71561035-71561054 None:intergenic 45.0%
GCCCAGTTTCATGCTACAAA+AGG + chr5.4:71561249-71561268 MS.gene038263:CDS 45.0%
GGATTCTTAGATCGAACGAC+GGG + chr5.4:71561691-71561710 MS.gene038263:CDS 45.0%
GGATTGGAAGGGTAATTGGA+TGG + chr5.4:71561713-71561732 MS.gene038263:CDS 45.0%
GGCTGGATGAGCTAGTATTT+GGG - chr5.4:71561749-71561768 None:intergenic 45.0%
GTGTGAGCTGAAAATAGGTG+TGG + chr5.4:71561888-71561907 MS.gene038263:CDS 45.0%
GTTCAAGCAGAGTGTGAAGA+TGG - chr5.4:71561144-71561163 None:intergenic 45.0%
TAGAAGCTTCGCGAATTCGA+GGG - chr5.4:71560756-71560775 None:intergenic 45.0%
TCCAACCTCACTACTAGAGA+AGG + chr5.4:71560992-71561011 MS.gene038263:CDS 45.0%
TCCTTCTCTAGTAGTGAGGT+TGG - chr5.4:71560996-71561015 None:intergenic 45.0%
TCTAGTAGTGAGGTTGGAGA+CGG - chr5.4:71560990-71561009 None:intergenic 45.0%
TGGCTGGATGAGCTAGTATT+TGG - chr5.4:71561750-71561769 None:intergenic 45.0%
TTAGAAGCTTCGCGAATTCG+AGG - chr5.4:71560757-71560776 None:intergenic 45.0%
TTTGGGGGAAGAGAACATTC+TGG - chr5.4:71560905-71560924 None:intergenic 45.0%
! CGTTTGGTTTCTGAGCTTCA+AGG - chr5.4:71560958-71560977 None:intergenic 45.0%
! GAAGATGGAGCATCATACCA+AGG - chr5.4:71561129-71561148 None:intergenic 45.0%
! GGAGGATTTGTTTCGCATTG+TGG + chr5.4:71561772-71561791 MS.gene038263:CDS 45.0%
!! ATTCTGGAAGGTTGATGACC+TGG - chr5.4:71560889-71560908 None:intergenic 45.0%
!! GAATCGGGTTGGCAAAACTT+GGG - chr5.4:71561216-71561235 None:intergenic 45.0%
!! GTTGATGACCTGGAGAGAAT+CGG - chr5.4:71560879-71560898 None:intergenic 45.0%
!! TCATCGGTGCCCTTAGTTTT+GGG - chr5.4:71561442-71561461 None:intergenic 45.0%
ACACACCACAGATGACGATG+TGG + chr5.4:71560826-71560845 MS.gene038263:CDS 50.0%
ACATCGTCATCTGTGGTGTG+TGG - chr5.4:71560827-71560846 None:intergenic 50.0%
ACGGGGATTGGAAGGGTAAT+TGG + chr5.4:71561709-71561728 MS.gene038263:CDS 50.0%
AGATGACCTACACCAGGTGA+AGG - chr5.4:71560725-71560744 None:intergenic 50.0%
ATACTAGCTCATCCAGCCAC+TGG + chr5.4:71561751-71561770 MS.gene038263:CDS 50.0%
CATCGTCATCTGTGGTGTGT+GGG - chr5.4:71560826-71560845 None:intergenic 50.0%
CGCAGGGACGGAAAATTCTT+TGG - chr5.4:71561077-71561096 None:intergenic 50.0%
GAAACAAATCCTCCAGTGGC+TGG - chr5.4:71561766-71561785 None:intergenic 50.0%
GAACGTGGTTCAGTGTTTGG+GGG - chr5.4:71560920-71560939 None:intergenic 50.0%
GAAGTGAAGAAGATGAGCGC+AGG - chr5.4:71561094-71561113 None:intergenic 50.0%
GACATCCACATCGTCATCTG+TGG - chr5.4:71560834-71560853 None:intergenic 50.0%
GACCTGGAGAGAATCGGAAA+TGG - chr5.4:71560873-71560892 None:intergenic 50.0%
GAGCTAGTATTTGGGCCTGT+TGG - chr5.4:71561741-71561760 None:intergenic 50.0%
GATGACCTACACCAGGTGAA+GGG - chr5.4:71560724-71560743 None:intergenic 50.0%
GCGCTCATCTTCTTCACTTC+CGG + chr5.4:71561094-71561113 MS.gene038263:CDS 50.0%
GGAGAGAATCGGAAATGGGA+AGG - chr5.4:71560868-71560887 None:intergenic 50.0%
GGGGAAGAGAACATTCTGGA+AGG - chr5.4:71560901-71560920 None:intergenic 50.0%
GGGTTTAATAAGGGTCCCAC+TGG - chr5.4:71561415-71561434 None:intergenic 50.0%
GGTGAAACCATGATGCCCTT+CGG - chr5.4:71561628-71561647 None:intergenic 50.0%
GTGGTGATTATCCCTTCACC+TGG + chr5.4:71560710-71560729 MS.gene038263:CDS 50.0%
TAAGTTGCTGCAGCAGAACG+AGG + chr5.4:71561183-71561202 MS.gene038263:CDS 50.0%
TCCCATTTCCGATTCTCTCC+AGG + chr5.4:71560868-71560887 MS.gene038263:CDS 50.0%
TGCGCAGAGACCACACAAAA+CGG - chr5.4:71561597-71561616 None:intergenic 50.0%
TTAGATCGAACGACGGGGAT+TGG + chr5.4:71561697-71561716 MS.gene038263:CDS 50.0%
! AGAGCGTTCATGACAGAACG+TGG - chr5.4:71560935-71560954 None:intergenic 50.0%
! GAGACGGCTTGTTTGACGTT+TGG - chr5.4:71560974-71560993 None:intergenic 50.0%
! TTTTCTCTGCTTCGGGAGCA+GGG + chr5.4:71561513-71561532 MS.gene038263:CDS 50.0%
! TTTTTCTCTGCTTCGGGAGC+AGG + chr5.4:71561512-71561531 MS.gene038263:CDS 50.0%
!! ACTTCCGGTGTTGCTTTCCT+TGG + chr5.4:71561109-71561128 MS.gene038263:CDS 50.0%
!! CTCATCGGTGCCCTTAGTTT+TGG - chr5.4:71561443-71561462 None:intergenic 50.0%
!! GGAATCGGGTTGGCAAAACT+TGG - chr5.4:71561217-71561236 None:intergenic 50.0%
!!! ATTCTGGAGCCCGTTTTGTG+TGG + chr5.4:71561584-71561603 MS.gene038263:CDS 50.0%
!!! TGCCCTTAGTTTTGGGCTCA+GGG - chr5.4:71561435-71561454 None:intergenic 50.0%
AACCATGATGCCCTTCGGTG+AGG - chr5.4:71561623-71561642 None:intergenic 55.0%
AAGCTTCGCGAATTCGAGGG+TGG - chr5.4:71560753-71560772 None:intergenic 55.0%
ACCATGATGCCCTTCGGTGA+GGG - chr5.4:71561622-71561641 None:intergenic 55.0%
ATCGAACGACGGGGATTGGA+AGG + chr5.4:71561701-71561720 MS.gene038263:CDS 55.0%
GAAGAAGATGAGCGCAGGGA+CGG - chr5.4:71561089-71561108 None:intergenic 55.0%
GCCACTCTATGCTGAGCAAC+AGG + chr5.4:71561846-71561865 MS.gene038263:CDS 55.0%
GCCTGTTGCTCAGCATAGAG+TGG - chr5.4:71561850-71561869 None:intergenic 55.0%
GCGCAGAGACCACACAAAAC+GGG - chr5.4:71561596-71561615 None:intergenic 55.0%
GGGCTCTTTCGATGAGGATC+AGG + chr5.4:71561534-71561553 MS.gene038263:CDS 55.0%
GGTAATTGGATGGGCCCAAC+AGG + chr5.4:71561723-71561742 MS.gene038263:CDS 55.0%
TCGAACGACGGGGATTGGAA+GGG + chr5.4:71561702-71561721 MS.gene038263:CDS 55.0%
TGTCAACAACGAAGGCAGCG+AGG - chr5.4:71561027-71561046 None:intergenic 55.0%
TTTCTCTGCTTCGGGAGCAG+GGG + chr5.4:71561514-71561533 MS.gene038263:CDS 55.0%
!! CGGGTTGGCAAAACTTGGGA+TGG - chr5.4:71561212-71561231 None:intergenic 55.0%
!!! GTGCCCTTAGTTTTGGGCTC+AGG - chr5.4:71561436-71561455 None:intergenic 55.0%
CTAGCTCATCCAGCCACTGG+AGG + chr5.4:71561754-71561773 MS.gene038263:CDS 60.0%
CTCAGCATAGAGTGGCCACG+CGG - chr5.4:71561842-71561861 None:intergenic 60.0%
CTGCGCAAACCCTCACCGAA+GGG + chr5.4:71561610-71561629 MS.gene038263:CDS 60.0%
GAGCAGGGGCTCTTTCGATG+AGG + chr5.4:71561528-71561547 MS.gene038263:CDS 60.0%
TAGAGTGGCCACGCGGCAAT+AGG - chr5.4:71561835-71561854 None:intergenic 60.0%
TCTGCGCAAACCCTCACCGA+AGG + chr5.4:71561609-71561628 MS.gene038263:CDS 60.0%
TTGGTGTGCCTATTGCCGCG+TGG + chr5.4:71561824-71561843 MS.gene038263:CDS 60.0%
!! ACCCTCACCGAAGGGCATCA+TGG + chr5.4:71561618-71561637 MS.gene038263:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 71560695 71562137 71560695 ID=MS.gene038263
chr5.4 mRNA 71560695 71562137 71560695 ID=MS.gene038263.t1;Parent=MS.gene038263
chr5.4 exon 71560695 71562137 71560695 ID=MS.gene038263.t1.exon1;Parent=MS.gene038263.t1
chr5.4 CDS 71560695 71562137 71560695 ID=cds.MS.gene038263.t1;Parent=MS.gene038263.t1
Gene Sequence

>MS.gene038263

ATGAAGAAAGCAGAAGTGGTGATTATCCCTTCACCTGGTGTAGGTCATCTTGTTTCCACCCTCGAATTCGCGAAGCTTCTAATCAACCGTGATAACCACCTCCGAATAACTGTCTTAGTCATAAAATTCCCACACACCACAGATGACGATGTGGATGTCTACACAAAATCCCTTCCCATTTCCGATTCTCTCCAGGTCATCAACCTTCCAGAATGTTCTCTTCCCCCAAACACTGAACCACGTTCTGTCATGAACGCTCTCCTTGAAGCTCAGAAACCAAACGTCAAACAAGCCGTCTCCAACCTCACTACTAGAGAAGGACATGGACACCTCGCTGCCTTCGTTGTTGACATGTTCTGCACCACCATGATTGATATTGCCAAAGAATTTTCCGTCCCTGCGCTCATCTTCTTCACTTCCGGTGTTGCTTTCCTTGGTATGATGCTCCATCTTCACACTCTGCTTGAACGAGACAACATCGATTCAACTAAGTTGCTGCAGCAGAACGAGGTAGCCATCCCAAGTTTTGCCAACCCGATTCCAATTAACTCGTTGCCCAGTTTCATGCTACAAAAGGAATTGGAATCATTTTTCATGAACTTTGCCAGTGGCGTCAAGAAAGCAAATGCCATTATAGTGAACTCATTTGAAGAGTTAGAATCGCATGCGGTTCAATCCTTTTTCTCTCATCCTGATCTAGCAGAATTACTGGTATATCCAGTGGGACCCTTATTAAACCCTGAGCCCAAAACTAAGGGCACCGATGAGTCTGATGATATCATCAAGTGGCTTGATGATCAACCTCCTTCCTCAGTAGTTTTTCTCTGCTTCGGGAGCAGGGGCTCTTTCGATGAGGATCAGGTTAAAGAGATTGCACATGCTATTGAGAATTCTGGAGCCCGTTTTGTGTGGTCTCTGCGCAAACCCTCACCGAAGGGCATCATGGTTTCACCCTCTGATTACCCTCTTTCTGATTTGGAATTGGTTTTACCTGAAGGATTCTTAGATCGAACGACGGGGATTGGAAGGGTAATTGGATGGGCCCAACAGGCCCAAATACTAGCTCATCCAGCCACTGGAGGATTTGTTTCGCATTGTGGTTGGAACTCAACACTCGAGAGCATATATTTTGGTGTGCCTATTGCCGCGTGGCCACTCTATGCTGAGCAACAGGCTAATGCTTTTGAATTGATGTGTGAGCTGAAAATAGGTGTGGAGATTGCTTTGGATTATAAGGTGGGGTTTAATGAAGGGCCTAACTATCTTGTAACTGCTGACAAGATTGAGAAAGGAATAAGGAGTGTGTTGGATAAAGATGGAGAATTCAGGAAAAAAGTGAAAGAGATGAGTGAAAAGAGTAAAAAGACTTTGTTAGAGGGTGGATCTTCCTACACTTACTTAGGTCGTTTGATTGATTATATTATGAATCGGGTATCAAATTAA
Protein sequence

>MS.gene038263.t1

MKKAEVVIIPSPGVGHLVSTLEFAKLLINRDNHLRITVLVIKFPHTTDDDVDVYTKSLPISDSLQVINLPECSLPPNTEPRSVMNALLEAQKPNVKQAVSNLTTREGHGHLAAFVVDMFCTTMIDIAKEFSVPALIFFTSGVAFLGMMLHLHTLLERDNIDSTKLLQQNEVAIPSFANPIPINSLPSFMLQKELESFFMNFASGVKKANAIIVNSFEELESHAVQSFFSHPDLAELLVYPVGPLLNPEPKTKGTDESDDIIKWLDDQPPSSVVFLCFGSRGSFDEDQVKEIAHAIENSGARFVWSLRKPSPKGIMVSPSDYPLSDLELVLPEGFLDRTTGIGRVIGWAQQAQILAHPATGGFVSHCGWNSTLESIYFGVPIAAWPLYAEQQANAFELMCELKIGVEIALDYKVGFNEGPNYLVTADKIEKGIRSVLDKDGEFRKKVKEMSEKSKKTLLEGGSSYTYLGRLIDYIMNRVSN