Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038262.t1 | RHN57634.1 | 74 | 477 | 46 | 2 | 1 | 399 | 1 | 477 | 2.40E-188 | 668.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038262.t1 | Q66PF3 | 43.7 | 485 | 176 | 12 | 2 | 398 | 3 | 478 | 1.0e-94 | 348.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038262.t1 | G7K388 | 74.0 | 477 | 46 | 2 | 1 | 399 | 1 | 477 | 1.7e-188 | 668.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038262.t1 | MTR_5g090670 | 88.788 | 330 | 36 | 1 | 1 | 329 | 1 | 330 | 0.0 | 601 |
MS.gene038262.t1 | MTR_5g090670 | 83.562 | 73 | 12 | 0 | 327 | 399 | 405 | 477 | 4.71e-32 | 127 |
MS.gene038262.t1 | MTR_5g090600 | 63.203 | 462 | 103 | 7 | 1 | 401 | 1 | 456 | 0.0 | 543 |
MS.gene038262.t1 | MTR_5g090700 | 80.606 | 330 | 59 | 3 | 1 | 327 | 1 | 328 | 0.0 | 538 |
MS.gene038262.t1 | MTR_5g090700 | 80.000 | 75 | 15 | 0 | 327 | 401 | 405 | 479 | 6.93e-32 | 127 |
MS.gene038262.t1 | MTR_5g090580 | 75.684 | 329 | 75 | 3 | 1 | 327 | 1 | 326 | 4.94e-173 | 493 |
MS.gene038262.t1 | MTR_5g090580 | 74.667 | 75 | 19 | 0 | 327 | 401 | 403 | 477 | 1.26e-28 | 117 |
MS.gene038262.t1 | MTR_5g090660 | 73.780 | 328 | 83 | 2 | 1 | 328 | 1 | 325 | 1.38e-171 | 493 |
MS.gene038262.t1 | MTR_5g090660 | 65.600 | 125 | 16 | 1 | 327 | 424 | 401 | 525 | 3.19e-35 | 137 |
MS.gene038262.t1 | MTR_5g090620 | 72.810 | 331 | 86 | 3 | 1 | 329 | 1 | 329 | 1.01e-167 | 479 |
MS.gene038262.t1 | MTR_5g090620 | 76.000 | 75 | 18 | 0 | 327 | 401 | 404 | 478 | 3.28e-31 | 125 |
MS.gene038262.t1 | MTR_5g090630 | 73.780 | 328 | 76 | 2 | 1 | 328 | 1 | 318 | 5.18e-167 | 478 |
MS.gene038262.t1 | MTR_5g090630 | 81.333 | 75 | 14 | 0 | 327 | 401 | 394 | 468 | 6.82e-33 | 129 |
MS.gene038262.t1 | MTR_5g090610 | 72.477 | 327 | 75 | 3 | 1 | 327 | 1 | 312 | 8.97e-165 | 472 |
MS.gene038262.t1 | MTR_5g090610 | 78.667 | 75 | 16 | 0 | 327 | 401 | 389 | 463 | 2.05e-31 | 125 |
MS.gene038262.t1 | MTR_5g090690 | 66.667 | 387 | 40 | 3 | 65 | 392 | 18 | 374 | 1.05e-156 | 448 |
MS.gene038262.t1 | MTR_5g098930 | 65.350 | 329 | 102 | 5 | 1 | 327 | 1 | 319 | 2.16e-143 | 417 |
MS.gene038262.t1 | MTR_5g098930 | 69.333 | 75 | 23 | 0 | 327 | 401 | 396 | 470 | 7.19e-27 | 112 |
MS.gene038262.t1 | MTR_5g090650 | 65.443 | 327 | 79 | 4 | 1 | 327 | 1 | 293 | 1.34e-140 | 405 |
MS.gene038262.t1 | MTR_5g070040 | 41.195 | 318 | 171 | 9 | 2 | 311 | 8 | 317 | 9.59e-69 | 226 |
MS.gene038262.t1 | MTR_5g070090 | 40.064 | 312 | 173 | 8 | 2 | 306 | 8 | 312 | 8.06e-62 | 207 |
MS.gene038262.t1 | MTR_2g046750 | 39.706 | 340 | 174 | 13 | 1 | 326 | 1 | 323 | 1.91e-60 | 204 |
MS.gene038262.t1 | MTR_2g046820 | 40.000 | 340 | 170 | 11 | 1 | 326 | 1 | 320 | 6.62e-58 | 197 |
MS.gene038262.t1 | MTR_2g040530 | 39.528 | 339 | 175 | 11 | 1 | 326 | 1 | 322 | 3.07e-57 | 195 |
MS.gene038262.t1 | MTR_3g009510 | 31.707 | 328 | 191 | 12 | 1 | 310 | 1 | 313 | 1.60e-43 | 159 |
MS.gene038262.t1 | MTR_6g023665 | 30.769 | 325 | 200 | 10 | 2 | 317 | 10 | 318 | 3.72e-38 | 144 |
MS.gene038262.t1 | MTR_6g488280 | 29.969 | 327 | 198 | 10 | 3 | 317 | 4 | 311 | 2.87e-36 | 139 |
MS.gene038262.t1 | MTR_0428s0010 | 29.969 | 327 | 198 | 10 | 3 | 317 | 4 | 311 | 2.87e-36 | 139 |
MS.gene038262.t1 | MTR_7g117170 | 33.227 | 313 | 187 | 11 | 6 | 310 | 16 | 314 | 2.11e-35 | 137 |
MS.gene038262.t1 | MTR_8g006730 | 27.215 | 316 | 211 | 8 | 2 | 310 | 3 | 306 | 3.44e-35 | 136 |
MS.gene038262.t1 | MTR_8g465670 | 29.747 | 316 | 200 | 9 | 2 | 310 | 4 | 304 | 1.10e-33 | 132 |
MS.gene038262.t1 | MTR_8g006220 | 30.380 | 316 | 198 | 9 | 2 | 310 | 3 | 303 | 1.36e-33 | 132 |
MS.gene038262.t1 | MTR_8g027885 | 31.429 | 315 | 190 | 11 | 6 | 313 | 19 | 314 | 3.30e-32 | 127 |
MS.gene038262.t1 | MTR_8g027870 | 30.408 | 319 | 188 | 10 | 6 | 313 | 19 | 314 | 4.57e-32 | 127 |
MS.gene038262.t1 | MTR_8g006710 | 27.445 | 317 | 208 | 10 | 2 | 310 | 3 | 305 | 7.25e-32 | 126 |
MS.gene038262.t1 | MTR_0184s0040 | 28.931 | 318 | 203 | 9 | 2 | 310 | 18 | 321 | 5.78e-30 | 121 |
MS.gene038262.t1 | MTR_0078s0190 | 28.931 | 318 | 203 | 9 | 2 | 310 | 18 | 321 | 5.78e-30 | 121 |
MS.gene038262.t1 | MTR_8g009055 | 26.899 | 316 | 211 | 9 | 2 | 310 | 3 | 305 | 9.05e-29 | 118 |
MS.gene038262.t1 | MTR_0078s0010 | 27.187 | 320 | 206 | 10 | 2 | 310 | 3 | 306 | 1.14e-28 | 117 |
MS.gene038262.t1 | MTR_8g008990 | 27.848 | 316 | 208 | 9 | 2 | 310 | 3 | 305 | 3.94e-28 | 116 |
MS.gene038262.t1 | MTR_8g009073 | 28.221 | 326 | 208 | 11 | 2 | 317 | 3 | 312 | 1.18e-27 | 114 |
MS.gene038262.t1 | MTR_6g033675 | 26.471 | 340 | 216 | 11 | 3 | 323 | 2 | 326 | 1.61e-27 | 114 |
MS.gene038262.t1 | MTR_8g009050 | 27.532 | 316 | 209 | 10 | 2 | 310 | 3 | 305 | 1.62e-27 | 114 |
MS.gene038262.t1 | MTR_8g009063 | 26.959 | 319 | 203 | 11 | 2 | 308 | 10 | 310 | 2.05e-27 | 114 |
MS.gene038262.t1 | MTR_7g047030 | 26.730 | 318 | 210 | 9 | 2 | 310 | 3 | 306 | 2.43e-27 | 114 |
MS.gene038262.t1 | MTR_7g047270 | 26.730 | 318 | 210 | 9 | 2 | 310 | 3 | 306 | 2.43e-27 | 114 |
MS.gene038262.t1 | MTR_8g006270 | 28.797 | 316 | 202 | 10 | 2 | 310 | 3 | 302 | 3.89e-27 | 113 |
MS.gene038262.t1 | MTR_0078s0060 | 28.931 | 318 | 202 | 9 | 2 | 310 | 3 | 305 | 7.40e-27 | 112 |
MS.gene038262.t1 | MTR_6g078320 | 26.462 | 325 | 210 | 9 | 4 | 308 | 10 | 325 | 1.34e-26 | 112 |
MS.gene038262.t1 | MTR_8g077590 | 27.019 | 322 | 199 | 12 | 4 | 310 | 8 | 308 | 2.80e-26 | 110 |
MS.gene038262.t1 | MTR_5g019580 | 27.052 | 329 | 201 | 11 | 2 | 310 | 4 | 313 | 2.83e-26 | 111 |
MS.gene038262.t1 | MTR_8g074550 | 25.633 | 316 | 214 | 7 | 2 | 308 | 5 | 308 | 4.35e-26 | 110 |
MS.gene038262.t1 | MTR_6g033615 | 27.796 | 313 | 202 | 8 | 3 | 308 | 2 | 297 | 2.36e-25 | 108 |
MS.gene038262.t1 | MTR_8g008970 | 25.231 | 325 | 219 | 9 | 2 | 317 | 3 | 312 | 2.49e-24 | 106 |
MS.gene038262.t1 | MTR_8g009067 | 26.074 | 326 | 215 | 10 | 2 | 317 | 3 | 312 | 2.52e-24 | 105 |
MS.gene038262.t1 | MTR_1g019510 | 24.534 | 322 | 223 | 9 | 2 | 317 | 3 | 310 | 1.84e-23 | 102 |
MS.gene038262.t1 | MTR_6g033725 | 26.687 | 326 | 200 | 9 | 3 | 308 | 2 | 308 | 1.86e-23 | 102 |
MS.gene038262.t1 | MTR_3g009500 | 30.112 | 269 | 163 | 12 | 1 | 253 | 1 | 260 | 3.08e-23 | 99.0 |
MS.gene038262.t1 | MTR_6g033660 | 27.044 | 318 | 205 | 9 | 6 | 308 | 5 | 310 | 6.67e-23 | 101 |
MS.gene038262.t1 | MTR_8g012635 | 25.496 | 353 | 219 | 14 | 2 | 337 | 3 | 328 | 7.45e-23 | 100 |
MS.gene038262.t1 | MTR_4g082810 | 26.101 | 318 | 210 | 8 | 4 | 308 | 6 | 311 | 1.05e-22 | 99.8 |
MS.gene038262.t1 | MTR_0078s0200 | 27.640 | 322 | 203 | 13 | 2 | 310 | 3 | 307 | 3.01e-22 | 97.1 |
MS.gene038262.t1 | MTR_8g006230 | 27.004 | 237 | 161 | 7 | 77 | 310 | 20 | 247 | 5.52e-22 | 95.5 |
MS.gene038262.t1 | MTR_0184s0030 | 27.640 | 322 | 203 | 13 | 2 | 310 | 3 | 307 | 6.36e-22 | 98.2 |
MS.gene038262.t1 | MTR_5g019580 | 26.543 | 324 | 181 | 12 | 2 | 310 | 56 | 337 | 9.16e-22 | 97.8 |
MS.gene038262.t1 | MTR_8g012745 | 24.852 | 338 | 220 | 12 | 2 | 322 | 3 | 323 | 2.65e-21 | 96.3 |
MS.gene038262.t1 | MTR_7g046490 | 27.187 | 320 | 202 | 11 | 2 | 310 | 3 | 302 | 6.03e-21 | 95.1 |
MS.gene038262.t1 | MTR_8g012650 | 26.522 | 230 | 145 | 6 | 110 | 330 | 110 | 324 | 6.79e-21 | 95.1 |
MS.gene038262.t1 | MTR_4g082820 | 26.518 | 313 | 208 | 11 | 6 | 308 | 8 | 308 | 6.85e-21 | 95.1 |
MS.gene038262.t1 | MTR_7g080900 | 23.913 | 322 | 210 | 10 | 2 | 308 | 9 | 310 | 9.25e-21 | 94.7 |
MS.gene038262.t1 | MTR_3g069710 | 25.536 | 466 | 259 | 18 | 2 | 400 | 9 | 453 | 1.33e-20 | 94.0 |
MS.gene038262.t1 | MTR_6g033625 | 27.554 | 323 | 204 | 11 | 3 | 308 | 2 | 311 | 1.49e-20 | 94.0 |
MS.gene038262.t1 | MTR_8g006260 | 25.526 | 333 | 212 | 12 | 3 | 318 | 4 | 317 | 2.47e-20 | 93.6 |
MS.gene038262.t1 | MTR_5g090680 | 85.417 | 48 | 7 | 0 | 1 | 48 | 1 | 48 | 2.02e-19 | 84.0 |
MS.gene038262.t1 | MTR_8g066610 | 25.143 | 350 | 207 | 10 | 6 | 322 | 10 | 337 | 2.33e-19 | 90.5 |
MS.gene038262.t1 | MTR_6g005600 | 26.154 | 325 | 212 | 9 | 3 | 316 | 4 | 311 | 2.91e-19 | 90.1 |
MS.gene038262.t1 | MTR_1g107350 | 28.070 | 342 | 201 | 16 | 6 | 323 | 9 | 329 | 2.92e-19 | 90.1 |
MS.gene038262.t1 | MTR_1g032490 | 25.595 | 336 | 198 | 12 | 6 | 313 | 11 | 322 | 5.08e-19 | 89.4 |
MS.gene038262.t1 | MTR_3g009520 | 27.481 | 262 | 160 | 12 | 2 | 244 | 3 | 253 | 1.34e-18 | 85.5 |
MS.gene038262.t1 | MTR_1g107315 | 27.576 | 330 | 198 | 14 | 6 | 313 | 9 | 319 | 2.35e-18 | 87.4 |
MS.gene038262.t1 | MTR_2g098430 | 26.061 | 330 | 206 | 16 | 2 | 310 | 3 | 315 | 2.56e-18 | 87.4 |
MS.gene038262.t1 | MTR_5g035580 | 21.915 | 470 | 270 | 15 | 6 | 403 | 14 | 458 | 3.78e-18 | 86.7 |
MS.gene038262.t1 | MTR_3g049970 | 26.364 | 330 | 202 | 13 | 6 | 313 | 10 | 320 | 7.08e-18 | 85.9 |
MS.gene038262.t1 | MTR_6g038240 | 23.734 | 316 | 213 | 9 | 6 | 309 | 12 | 311 | 8.48e-18 | 85.5 |
MS.gene038262.t1 | MTR_5g072810 | 24.516 | 310 | 216 | 9 | 4 | 308 | 11 | 307 | 2.25e-17 | 84.3 |
MS.gene038262.t1 | MTR_3g008010 | 25.588 | 340 | 204 | 12 | 3 | 308 | 8 | 332 | 4.08e-17 | 83.6 |
MS.gene038262.t1 | MTR_1g107360 | 22.245 | 481 | 265 | 17 | 5 | 401 | 9 | 464 | 4.27e-17 | 83.6 |
MS.gene038262.t1 | MTR_4g095008 | 26.911 | 327 | 201 | 10 | 15 | 324 | 21 | 326 | 5.27e-17 | 83.6 |
MS.gene038262.t1 | MTR_8g083290 | 26.190 | 336 | 188 | 10 | 6 | 308 | 5 | 313 | 7.65e-17 | 82.8 |
MS.gene038262.t1 | MTR_8g064870 | 27.660 | 235 | 137 | 9 | 94 | 311 | 102 | 320 | 8.86e-17 | 82.8 |
MS.gene038262.t1 | MTR_8g009067 | 27.778 | 198 | 133 | 6 | 123 | 317 | 4 | 194 | 1.47e-16 | 80.9 |
MS.gene038262.t1 | MTR_0536s0020 | 24.847 | 326 | 207 | 12 | 2 | 314 | 15 | 315 | 1.80e-16 | 81.6 |
MS.gene038262.t1 | MTR_8g064880 | 25.836 | 329 | 206 | 12 | 6 | 312 | 10 | 322 | 1.96e-16 | 81.6 |
MS.gene038262.t1 | MTR_7g070660 | 27.053 | 207 | 144 | 3 | 106 | 309 | 115 | 317 | 2.34e-16 | 81.3 |
MS.gene038262.t1 | MTR_4g485630 | 25.938 | 320 | 206 | 11 | 6 | 309 | 10 | 314 | 3.40e-16 | 80.9 |
MS.gene038262.t1 | MTR_7g080950 | 25.392 | 319 | 206 | 11 | 3 | 308 | 4 | 303 | 3.43e-16 | 80.9 |
MS.gene038262.t1 | MTR_4g485620 | 29.048 | 210 | 130 | 7 | 112 | 309 | 99 | 301 | 6.68e-16 | 79.7 |
MS.gene038262.t1 | MTR_7g070610 | 27.700 | 213 | 140 | 5 | 106 | 309 | 117 | 324 | 7.94e-16 | 79.7 |
MS.gene038262.t1 | MTR_5g464760 | 24.646 | 353 | 220 | 12 | 3 | 322 | 10 | 349 | 1.02e-15 | 79.3 |
MS.gene038262.t1 | MTR_6g014290 | 26.100 | 341 | 203 | 13 | 2 | 308 | 7 | 332 | 1.06e-15 | 79.3 |
MS.gene038262.t1 | MTR_5g035560 | 23.364 | 321 | 204 | 10 | 6 | 309 | 12 | 307 | 1.12e-15 | 79.3 |
MS.gene038262.t1 | MTR_1g107285 | 26.971 | 241 | 140 | 9 | 88 | 310 | 97 | 319 | 1.40e-15 | 79.0 |
MS.gene038262.t1 | MTR_4g485590 | 26.807 | 332 | 198 | 12 | 4 | 322 | 8 | 307 | 1.82e-15 | 78.2 |
MS.gene038262.t1 | MTR_7g013180 | 20.721 | 333 | 239 | 9 | 1 | 322 | 1 | 319 | 3.10e-15 | 77.8 |
MS.gene038262.t1 | MTR_5g045970 | 23.810 | 336 | 214 | 13 | 6 | 316 | 17 | 335 | 4.45e-15 | 77.4 |
MS.gene038262.t1 | MTR_0036s0220 | 25.749 | 334 | 203 | 12 | 6 | 308 | 13 | 332 | 6.26e-15 | 77.0 |
MS.gene038262.t1 | MTR_4g094920 | 25.610 | 328 | 204 | 10 | 15 | 324 | 36 | 341 | 7.00e-15 | 77.0 |
MS.gene038262.t1 | MTR_4g117890 | 23.839 | 323 | 198 | 12 | 2 | 305 | 10 | 303 | 7.26e-15 | 76.6 |
MS.gene038262.t1 | MTR_7g080940 | 23.659 | 317 | 214 | 11 | 3 | 308 | 9 | 308 | 7.73e-15 | 76.6 |
MS.gene038262.t1 | MTR_5g016480 | 26.393 | 341 | 220 | 13 | 2 | 323 | 5 | 333 | 7.90e-15 | 76.6 |
MS.gene038262.t1 | MTR_5g090590 | 65.306 | 49 | 17 | 0 | 332 | 380 | 6 | 54 | 1.16e-14 | 68.9 |
MS.gene038262.t1 | MTR_6g038200 | 22.769 | 325 | 209 | 12 | 4 | 309 | 10 | 311 | 1.20e-14 | 75.9 |
MS.gene038262.t1 | MTR_6g038300 | 23.344 | 317 | 211 | 11 | 6 | 308 | 12 | 310 | 1.33e-14 | 75.9 |
MS.gene038262.t1 | MTR_6g014186 | 22.148 | 447 | 288 | 16 | 2 | 399 | 4 | 439 | 1.74e-14 | 75.5 |
MS.gene038262.t1 | MTR_5g029800 | 25.786 | 318 | 198 | 11 | 5 | 305 | 11 | 307 | 1.91e-14 | 75.5 |
MS.gene038262.t1 | MTR_3g084520 | 22.601 | 323 | 215 | 10 | 7 | 308 | 8 | 316 | 2.38e-14 | 75.1 |
MS.gene038262.t1 | MTR_7g012120 | 29.000 | 200 | 128 | 5 | 111 | 305 | 123 | 313 | 2.42e-14 | 75.1 |
MS.gene038262.t1 | MTR_3g031450 | 21.489 | 470 | 269 | 15 | 4 | 403 | 17 | 456 | 2.62e-14 | 75.1 |
MS.gene038262.t1 | MTR_6g014250 | 25.000 | 344 | 203 | 13 | 2 | 308 | 7 | 332 | 2.67e-14 | 75.1 |
MS.gene038262.t1 | MTR_3g031400 | 23.197 | 319 | 201 | 11 | 4 | 308 | 17 | 305 | 2.83e-14 | 74.7 |
MS.gene038262.t1 | MTR_5g031840 | 24.047 | 341 | 203 | 13 | 1 | 308 | 1 | 318 | 4.66e-14 | 74.3 |
MS.gene038262.t1 | MTR_8g009073 | 28.723 | 188 | 124 | 6 | 133 | 317 | 3 | 183 | 4.84e-14 | 73.2 |
MS.gene038262.t1 | MTR_7g055710 | 23.708 | 329 | 208 | 13 | 6 | 309 | 12 | 322 | 5.10e-14 | 74.3 |
MS.gene038262.t1 | MTR_7g070860 | 20.825 | 509 | 283 | 17 | 2 | 424 | 4 | 478 | 5.87e-14 | 73.9 |
MS.gene038262.t1 | MTR_7g080935 | 23.899 | 318 | 212 | 12 | 3 | 308 | 9 | 308 | 6.37e-14 | 73.9 |
MS.gene038262.t1 | MTR_8g088560 | 24.138 | 319 | 203 | 10 | 5 | 305 | 10 | 307 | 7.44e-14 | 73.6 |
MS.gene038262.t1 | MTR_3g084540 | 22.823 | 333 | 202 | 11 | 7 | 308 | 8 | 316 | 8.96e-14 | 73.6 |
MS.gene038262.t1 | MTR_7g070740 | 28.704 | 216 | 134 | 9 | 106 | 309 | 115 | 322 | 1.05e-13 | 73.2 |
MS.gene038262.t1 | MTR_8g083280 | 40.000 | 100 | 57 | 1 | 210 | 309 | 221 | 317 | 1.34e-13 | 72.8 |
MS.gene038262.t1 | MTR_4g118000 | 25.157 | 318 | 199 | 12 | 9 | 314 | 16 | 306 | 1.55e-13 | 72.8 |
MS.gene038262.t1 | MTR_4g064987 | 22.756 | 312 | 215 | 11 | 3 | 308 | 6 | 297 | 2.12e-13 | 72.0 |
MS.gene038262.t1 | MTR_1g062380 | 23.478 | 345 | 191 | 13 | 6 | 309 | 17 | 329 | 2.14e-13 | 72.4 |
MS.gene038262.t1 | MTR_6g035265 | 24.684 | 316 | 207 | 13 | 9 | 314 | 15 | 309 | 2.30e-13 | 72.0 |
MS.gene038262.t1 | MTR_7g070810 | 23.692 | 325 | 223 | 9 | 2 | 314 | 6 | 317 | 2.42e-13 | 72.0 |
MS.gene038262.t1 | MTR_6g038230 | 23.839 | 323 | 208 | 15 | 4 | 309 | 10 | 311 | 3.01e-13 | 71.6 |
MS.gene038262.t1 | MTR_4g094220 | 25.287 | 348 | 198 | 15 | 3 | 308 | 5 | 332 | 3.39e-13 | 71.6 |
MS.gene038262.t1 | MTR_3g084530 | 22.936 | 327 | 209 | 12 | 7 | 308 | 8 | 316 | 3.43e-13 | 71.6 |
MS.gene038262.t1 | MTR_8g466240 | 25.507 | 345 | 201 | 14 | 3 | 322 | 6 | 319 | 3.49e-13 | 71.6 |
MS.gene038262.t1 | MTR_1g107375 | 28.293 | 205 | 113 | 8 | 124 | 309 | 122 | 311 | 3.82e-13 | 71.2 |
MS.gene038262.t1 | MTR_6g013680 | 24.606 | 317 | 198 | 13 | 112 | 399 | 71 | 375 | 4.25e-13 | 70.9 |
MS.gene038262.t1 | MTR_5g464810 | 24.260 | 338 | 207 | 10 | 4 | 308 | 11 | 332 | 4.29e-13 | 71.2 |
MS.gene038262.t1 | MTR_5g064240 | 24.260 | 338 | 207 | 10 | 4 | 308 | 11 | 332 | 4.29e-13 | 71.2 |
MS.gene038262.t1 | MTR_7g070800 | 26.066 | 211 | 143 | 5 | 106 | 309 | 110 | 314 | 4.60e-13 | 71.2 |
MS.gene038262.t1 | MTR_1g107365 | 25.305 | 328 | 200 | 13 | 5 | 309 | 45 | 350 | 5.10e-13 | 71.2 |
MS.gene038262.t1 | MTR_5g072830 | 22.468 | 316 | 222 | 8 | 4 | 313 | 9 | 307 | 5.18e-13 | 70.9 |
MS.gene038262.t1 | MTR_6g013440 | 26.012 | 346 | 199 | 15 | 2 | 308 | 8 | 335 | 5.33e-13 | 70.9 |
MS.gene038262.t1 | MTR_5g072820 | 22.801 | 307 | 216 | 7 | 4 | 305 | 9 | 299 | 5.72e-13 | 70.9 |
MS.gene038262.t1 | MTR_1g107380 | 26.887 | 212 | 131 | 7 | 110 | 308 | 123 | 323 | 6.04e-13 | 70.9 |
MS.gene038262.t1 | MTR_6g038220 | 24.316 | 329 | 194 | 15 | 6 | 309 | 12 | 310 | 8.62e-13 | 70.1 |
MS.gene038262.t1 | MTR_5g072840 | 22.977 | 309 | 219 | 8 | 4 | 308 | 9 | 302 | 9.87e-13 | 70.1 |
MS.gene038262.t1 | MTR_5g031830 | 24.412 | 340 | 195 | 14 | 6 | 308 | 13 | 327 | 1.16e-12 | 70.1 |
MS.gene038262.t1 | MTR_8g044140 | 26.267 | 217 | 128 | 9 | 111 | 309 | 85 | 287 | 1.23e-12 | 69.7 |
MS.gene038262.t1 | MTR_7g070870 | 29.932 | 147 | 97 | 2 | 171 | 314 | 181 | 324 | 1.40e-12 | 69.7 |
MS.gene038262.t1 | MTR_6g052375 | 35.455 | 110 | 68 | 1 | 196 | 302 | 53 | 162 | 1.44e-12 | 68.6 |
MS.gene038262.t1 | MTR_5g016660 | 26.852 | 216 | 130 | 5 | 111 | 309 | 119 | 323 | 1.81e-12 | 69.3 |
MS.gene038262.t1 | MTR_5g040030 | 21.672 | 323 | 231 | 8 | 2 | 309 | 11 | 326 | 1.94e-12 | 69.3 |
MS.gene038262.t1 | MTR_5g072860 | 24.012 | 329 | 208 | 12 | 6 | 313 | 19 | 326 | 1.95e-12 | 69.3 |
MS.gene038262.t1 | MTR_2g034990 | 26.804 | 194 | 117 | 6 | 124 | 305 | 131 | 311 | 2.35e-12 | 68.9 |
MS.gene038262.t1 | MTR_4g064987 | 21.795 | 312 | 224 | 10 | 3 | 308 | 6 | 303 | 2.48e-12 | 68.9 |
MS.gene038262.t1 | MTR_8g059425 | 23.513 | 353 | 197 | 13 | 2 | 308 | 7 | 332 | 2.79e-12 | 68.9 |
MS.gene038262.t1 | MTR_6g014220 | 25.072 | 347 | 199 | 14 | 2 | 308 | 7 | 332 | 2.79e-12 | 68.6 |
MS.gene038262.t1 | MTR_0009s0240 | 25.526 | 333 | 194 | 15 | 3 | 310 | 5 | 308 | 2.80e-12 | 68.6 |
MS.gene038262.t1 | MTR_4g117960 | 23.385 | 325 | 207 | 14 | 9 | 314 | 15 | 316 | 2.93e-12 | 68.6 |
MS.gene038262.t1 | MTR_6g035185 | 24.149 | 323 | 209 | 12 | 9 | 314 | 15 | 318 | 3.10e-12 | 68.6 |
MS.gene038262.t1 | MTR_3g479520 | 23.967 | 484 | 276 | 17 | 2 | 402 | 12 | 486 | 3.61e-12 | 68.6 |
MS.gene038262.t1 | MTR_7g102520 | 22.039 | 363 | 223 | 11 | 7 | 336 | 14 | 349 | 4.23e-12 | 68.2 |
MS.gene038262.t1 | MTR_3g479470 | 23.478 | 345 | 218 | 14 | 2 | 314 | 10 | 340 | 6.98e-12 | 67.4 |
MS.gene038262.t1 | MTR_4g031800 | 28.641 | 206 | 120 | 7 | 111 | 305 | 118 | 307 | 7.09e-12 | 67.4 |
MS.gene038262.t1 | MTR_7g071040 | 22.188 | 329 | 220 | 11 | 3 | 309 | 15 | 329 | 7.99e-12 | 67.4 |
MS.gene038262.t1 | MTR_7g070940 | 28.436 | 211 | 132 | 6 | 106 | 309 | 113 | 311 | 1.32e-11 | 66.6 |
MS.gene038262.t1 | MTR_5g067170 | 22.581 | 310 | 212 | 8 | 9 | 305 | 15 | 309 | 1.36e-11 | 66.6 |
MS.gene038262.t1 | MTR_7g070910 | 22.796 | 329 | 218 | 9 | 3 | 309 | 9 | 323 | 1.48e-11 | 66.6 |
MS.gene038262.t1 | MTR_7g102460 | 23.423 | 333 | 213 | 14 | 3 | 309 | 7 | 323 | 1.51e-11 | 66.6 |
MS.gene038262.t1 | MTR_5g039900 | 25.352 | 213 | 135 | 5 | 111 | 309 | 122 | 324 | 1.59e-11 | 66.2 |
MS.gene038262.t1 | MTR_1g040310 | 27.273 | 209 | 135 | 7 | 111 | 309 | 123 | 324 | 1.65e-11 | 66.2 |
MS.gene038262.t1 | MTR_7g102450 | 22.840 | 324 | 200 | 12 | 7 | 309 | 13 | 307 | 2.03e-11 | 66.2 |
MS.gene038262.t1 | MTR_5g031860 | 24.412 | 340 | 194 | 13 | 6 | 308 | 13 | 326 | 2.22e-11 | 65.9 |
MS.gene038262.t1 | MTR_7g117405 | 24.771 | 327 | 203 | 14 | 7 | 309 | 14 | 321 | 2.43e-11 | 65.9 |
MS.gene038262.t1 | MTR_6g014020 | 24.269 | 342 | 210 | 13 | 2 | 308 | 7 | 334 | 2.64e-11 | 65.9 |
MS.gene038262.t1 | MTR_3g479490 | 24.545 | 330 | 221 | 11 | 2 | 308 | 3 | 327 | 3.83e-11 | 65.1 |
MS.gene038262.t1 | MTR_6g035295 | 26.244 | 221 | 133 | 7 | 110 | 313 | 121 | 328 | 3.95e-11 | 65.1 |
MS.gene038262.t1 | MTR_2g059240 | 25.837 | 209 | 136 | 5 | 114 | 309 | 123 | 325 | 5.36e-11 | 64.7 |
MS.gene038262.t1 | MTR_7g470610 | 27.638 | 199 | 117 | 7 | 117 | 309 | 2 | 179 | 8.55e-11 | 63.2 |
MS.gene038262.t1 | MTR_7g070583 | 27.638 | 199 | 117 | 7 | 117 | 309 | 2 | 179 | 8.55e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038262.t1 | AT3G21760 | 39.577 | 331 | 186 | 6 | 3 | 322 | 2 | 329 | 6.41e-67 | 221 |
MS.gene038262.t1 | AT3G21750 | 38.650 | 326 | 176 | 10 | 3 | 319 | 2 | 312 | 1.24e-65 | 218 |
MS.gene038262.t1 | AT3G21780 | 39.228 | 311 | 177 | 7 | 3 | 309 | 2 | 304 | 1.96e-65 | 217 |
MS.gene038262.t1 | AT3G21790 | 38.365 | 318 | 179 | 8 | 3 | 309 | 2 | 313 | 1.66e-64 | 215 |
MS.gene038262.t1 | AT4G15280 | 38.532 | 327 | 188 | 7 | 3 | 322 | 2 | 322 | 3.46e-64 | 214 |
MS.gene038262.t1 | AT4G15280 | 38.532 | 327 | 188 | 7 | 3 | 322 | 34 | 354 | 6.19e-64 | 214 |
MS.gene038262.t1 | AT3G21800 | 38.006 | 321 | 176 | 8 | 1 | 309 | 1 | 310 | 4.48e-62 | 208 |
MS.gene038262.t1 | AT1G07250 | 38.125 | 320 | 184 | 9 | 1 | 308 | 2 | 319 | 1.74e-59 | 201 |
MS.gene038262.t1 | AT2G29730 | 37.812 | 320 | 181 | 8 | 1 | 309 | 1 | 313 | 3.72e-59 | 200 |
MS.gene038262.t1 | AT1G07240 | 37.152 | 323 | 183 | 9 | 1 | 308 | 1 | 318 | 2.61e-58 | 198 |
MS.gene038262.t1 | AT2G29740 | 36.446 | 332 | 195 | 11 | 2 | 321 | 5 | 332 | 5.30e-56 | 192 |
MS.gene038262.t1 | AT1G07260 | 35.542 | 332 | 195 | 11 | 3 | 321 | 4 | 329 | 1.25e-55 | 191 |
MS.gene038262.t1 | AT2G29710 | 38.006 | 321 | 176 | 9 | 1 | 308 | 1 | 311 | 1.63e-53 | 185 |
MS.gene038262.t1 | AT2G29750 | 35.780 | 327 | 190 | 11 | 2 | 313 | 5 | 326 | 4.45e-51 | 179 |
MS.gene038262.t1 | AT4G15260 | 41.509 | 212 | 108 | 5 | 117 | 322 | 1 | 202 | 9.97e-49 | 170 |
MS.gene038262.t1 | AT3G16520 | 31.790 | 324 | 194 | 11 | 1 | 311 | 1 | 310 | 8.17e-43 | 156 |
MS.gene038262.t1 | AT3G16520 | 31.790 | 324 | 194 | 11 | 1 | 311 | 1 | 310 | 1.27e-42 | 156 |
MS.gene038262.t1 | AT3G16520 | 31.790 | 324 | 194 | 11 | 1 | 311 | 1 | 310 | 1.28e-42 | 156 |
MS.gene038262.t1 | AT4G15270 | 37.559 | 213 | 124 | 5 | 3 | 208 | 2 | 212 | 1.15e-40 | 145 |
MS.gene038262.t1 | AT4G15270 | 36.607 | 224 | 133 | 5 | 3 | 219 | 2 | 223 | 1.41e-40 | 147 |
MS.gene038262.t1 | AT4G15270 | 37.563 | 197 | 114 | 5 | 3 | 192 | 2 | 196 | 9.34e-35 | 129 |
MS.gene038262.t1 | AT4G01070 | 30.696 | 316 | 199 | 9 | 2 | 310 | 5 | 307 | 5.00e-33 | 127 |
MS.gene038262.t1 | AT4G01070 | 30.696 | 316 | 199 | 9 | 2 | 310 | 5 | 307 | 1.85e-32 | 128 |
MS.gene038262.t1 | AT1G01420 | 30.351 | 313 | 196 | 9 | 6 | 310 | 12 | 310 | 4.46e-29 | 119 |
MS.gene038262.t1 | AT1G01420 | 30.351 | 313 | 196 | 9 | 6 | 310 | 9 | 307 | 4.59e-29 | 119 |
MS.gene038262.t1 | AT5G66690 | 25.150 | 334 | 207 | 12 | 1 | 318 | 3 | 309 | 2.17e-28 | 117 |
MS.gene038262.t1 | AT1G01390 | 28.939 | 311 | 203 | 9 | 6 | 310 | 9 | 307 | 2.25e-27 | 114 |
MS.gene038262.t1 | AT1G01390 | 28.939 | 311 | 203 | 9 | 6 | 310 | 26 | 324 | 2.45e-27 | 114 |
MS.gene038262.t1 | AT5G26310 | 28.788 | 330 | 206 | 14 | 1 | 322 | 3 | 311 | 6.40e-27 | 112 |
MS.gene038262.t1 | AT2G18570 | 27.052 | 329 | 198 | 11 | 1 | 310 | 1 | 306 | 7.99e-27 | 112 |
MS.gene038262.t1 | AT4G36770 | 29.814 | 322 | 186 | 11 | 8 | 313 | 7 | 304 | 1.10e-25 | 108 |
MS.gene038262.t1 | AT3G50740 | 24.324 | 333 | 216 | 12 | 1 | 318 | 3 | 314 | 1.76e-24 | 105 |
MS.gene038262.t1 | AT4G15490 | 27.042 | 355 | 198 | 15 | 2 | 323 | 5 | 331 | 5.39e-20 | 92.4 |
MS.gene038262.t1 | AT5G12890 | 25.816 | 337 | 201 | 16 | 2 | 310 | 7 | 322 | 3.23e-19 | 90.1 |
MS.gene038262.t1 | AT4G34135 | 25.862 | 348 | 190 | 15 | 2 | 309 | 8 | 327 | 7.27e-19 | 87.8 |
MS.gene038262.t1 | AT4G34135 | 25.862 | 348 | 190 | 15 | 2 | 309 | 8 | 327 | 1.68e-18 | 87.8 |
MS.gene038262.t1 | AT3G21560 | 26.923 | 338 | 187 | 15 | 6 | 309 | 13 | 324 | 2.10e-18 | 87.8 |
MS.gene038262.t1 | AT1G05680 | 26.316 | 323 | 202 | 11 | 4 | 309 | 5 | 308 | 2.59e-18 | 87.0 |
MS.gene038262.t1 | AT2G15480 | 24.551 | 334 | 222 | 11 | 2 | 314 | 7 | 331 | 1.04e-17 | 85.5 |
MS.gene038262.t1 | AT2G15480 | 24.551 | 334 | 222 | 11 | 2 | 314 | 7 | 331 | 1.14e-17 | 85.5 |
MS.gene038262.t1 | AT4G15500 | 27.126 | 247 | 149 | 10 | 94 | 324 | 97 | 328 | 2.67e-17 | 84.3 |
MS.gene038262.t1 | AT4G34131 | 26.686 | 341 | 196 | 13 | 2 | 309 | 7 | 326 | 2.83e-17 | 84.3 |
MS.gene038262.t1 | AT1G05675 | 25.153 | 326 | 202 | 12 | 4 | 309 | 5 | 308 | 2.77e-16 | 80.9 |
MS.gene038262.t1 | AT2G36750 | 23.438 | 320 | 216 | 11 | 7 | 308 | 12 | 320 | 3.12e-16 | 80.9 |
MS.gene038262.t1 | AT2G18560 | 25.751 | 233 | 152 | 7 | 86 | 312 | 1 | 218 | 3.41e-16 | 80.1 |
MS.gene038262.t1 | AT4G15480 | 28.632 | 234 | 133 | 10 | 95 | 311 | 111 | 327 | 4.35e-16 | 80.5 |
MS.gene038262.t1 | AT1G51210 | 25.000 | 328 | 200 | 13 | 3 | 311 | 18 | 318 | 7.65e-16 | 79.7 |
MS.gene038262.t1 | AT3G46700 | 23.547 | 327 | 221 | 12 | 1 | 320 | 5 | 309 | 8.79e-16 | 79.3 |
MS.gene038262.t1 | AT3G46670 | 25.688 | 327 | 198 | 15 | 6 | 315 | 10 | 308 | 1.44e-15 | 79.0 |
MS.gene038262.t1 | AT2G36770 | 23.148 | 324 | 213 | 13 | 7 | 308 | 16 | 325 | 1.46e-15 | 79.0 |
MS.gene038262.t1 | AT1G22400 | 26.891 | 357 | 209 | 15 | 2 | 322 | 10 | 350 | 1.85e-15 | 78.6 |
MS.gene038262.t1 | AT2G23250 | 32.110 | 218 | 128 | 9 | 106 | 314 | 87 | 293 | 2.93e-15 | 77.8 |
MS.gene038262.t1 | AT2G30150 | 26.045 | 311 | 205 | 10 | 6 | 308 | 14 | 307 | 3.75e-15 | 77.4 |
MS.gene038262.t1 | AT3G55710 | 25.538 | 325 | 216 | 9 | 2 | 315 | 5 | 314 | 1.00e-14 | 76.3 |
MS.gene038262.t1 | AT1G24100 | 25.767 | 326 | 202 | 10 | 3 | 309 | 9 | 313 | 1.58e-14 | 75.9 |
MS.gene038262.t1 | AT2G30150 | 25.649 | 308 | 204 | 10 | 9 | 308 | 1 | 291 | 2.11e-14 | 75.1 |
MS.gene038262.t1 | AT3G02100 | 22.769 | 325 | 218 | 12 | 1 | 305 | 9 | 320 | 2.27e-14 | 75.1 |
MS.gene038262.t1 | AT3G55700 | 29.798 | 198 | 119 | 6 | 125 | 315 | 126 | 310 | 2.73e-14 | 75.1 |
MS.gene038262.t1 | AT2G28080 | 26.582 | 237 | 149 | 9 | 83 | 308 | 103 | 325 | 4.97e-14 | 74.3 |
MS.gene038262.t1 | AT2G36800 | 21.591 | 352 | 185 | 12 | 7 | 308 | 14 | 324 | 6.58e-14 | 73.9 |
MS.gene038262.t1 | AT5G59580 | 23.054 | 334 | 220 | 14 | 3 | 322 | 7 | 317 | 8.50e-14 | 73.6 |
MS.gene038262.t1 | AT2G31750 | 24.638 | 345 | 203 | 16 | 3 | 322 | 6 | 318 | 9.90e-14 | 73.2 |
MS.gene038262.t1 | AT2G15490 | 23.729 | 354 | 192 | 11 | 6 | 314 | 8 | 328 | 1.12e-13 | 73.2 |
MS.gene038262.t1 | AT2G31750 | 24.638 | 345 | 203 | 16 | 3 | 322 | 6 | 318 | 1.15e-13 | 73.2 |
MS.gene038262.t1 | AT2G36780 | 23.810 | 336 | 196 | 11 | 7 | 308 | 16 | 325 | 1.24e-13 | 73.2 |
MS.gene038262.t1 | AT2G23260 | 38.571 | 140 | 68 | 6 | 182 | 308 | 172 | 306 | 1.40e-13 | 72.8 |
MS.gene038262.t1 | AT3G46650 | 23.659 | 317 | 206 | 13 | 3 | 315 | 8 | 292 | 1.67e-13 | 72.4 |
MS.gene038262.t1 | AT5G38010 | 24.214 | 318 | 213 | 13 | 2 | 308 | 7 | 307 | 1.80e-13 | 72.4 |
MS.gene038262.t1 | AT1G73880 | 25.152 | 330 | 209 | 13 | 3 | 313 | 12 | 322 | 1.81e-13 | 72.4 |
MS.gene038262.t1 | AT5G59590 | 22.289 | 332 | 230 | 12 | 1 | 322 | 6 | 319 | 2.08e-13 | 72.0 |
MS.gene038262.t1 | AT2G31790 | 26.398 | 322 | 207 | 12 | 2 | 309 | 5 | 310 | 2.11e-13 | 72.0 |
MS.gene038262.t1 | AT2G15490 | 23.782 | 349 | 188 | 11 | 6 | 309 | 8 | 323 | 2.22e-13 | 72.4 |
MS.gene038262.t1 | AT5G38040 | 22.247 | 445 | 264 | 16 | 15 | 395 | 20 | 446 | 3.89e-13 | 71.2 |
MS.gene038262.t1 | AT3G46690 | 23.125 | 320 | 224 | 11 | 1 | 314 | 5 | 308 | 4.61e-13 | 71.2 |
MS.gene038262.t1 | AT5G03490 | 23.404 | 329 | 211 | 9 | 2 | 311 | 16 | 322 | 5.04e-13 | 71.2 |
MS.gene038262.t1 | AT5G37950 | 24.638 | 207 | 146 | 6 | 106 | 308 | 79 | 279 | 9.84e-13 | 69.7 |
MS.gene038262.t1 | AT3G11340 | 24.437 | 311 | 210 | 11 | 3 | 308 | 7 | 297 | 2.35e-12 | 68.9 |
MS.gene038262.t1 | AT4G34138 | 24.302 | 358 | 203 | 16 | 3 | 322 | 9 | 336 | 3.78e-12 | 68.6 |
MS.gene038262.t1 | AT2G36790 | 23.913 | 322 | 213 | 10 | 7 | 308 | 15 | 324 | 1.05e-11 | 67.0 |
MS.gene038262.t1 | AT2G43820 | 24.545 | 330 | 192 | 15 | 2 | 308 | 4 | 299 | 1.29e-11 | 66.6 |
MS.gene038262.t1 | AT5G37950 | 24.272 | 206 | 142 | 6 | 106 | 308 | 79 | 273 | 1.30e-11 | 66.2 |
MS.gene038262.t1 | AT1G22340 | 22.781 | 338 | 217 | 10 | 2 | 308 | 10 | 334 | 1.36e-11 | 66.6 |
MS.gene038262.t1 | AT5G14860 | 26.393 | 341 | 188 | 17 | 7 | 309 | 10 | 325 | 3.29e-11 | 65.5 |
MS.gene038262.t1 | AT2G36760 | 22.024 | 336 | 202 | 11 | 7 | 308 | 16 | 325 | 8.12e-11 | 64.3 |
Find 108 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATCTTCCTACACTTATTT+AGG | 0.154077 | 5.4:+71559158 | MS.gene038262:CDS |
GATTACCCTCTTTATGATTT+AGG | 0.202621 | 5.4:+71558735 | MS.gene038262:CDS |
GTCAACAGTGCCCTTAGTTT+TGG | 0.207899 | 5.4:-71558517 | None:intergenic |
GCAGCCATGGTGCCCTTTGC+TGG | 0.240355 | 5.4:-71558705 | None:intergenic |
TGGATATTGCATTGGATTAT+AGG | 0.259535 | 5.4:+71558991 | MS.gene038262:CDS |
CCTCCTTATGTCAGAGGCTT+TGG | 0.323903 | 5.4:+71559892 | MS.gene038262:intron |
GATTGATTATATTATGAATC+AGG | 0.337657 | 5.4:+71559187 | MS.gene038262:CDS |
GAGTAAGAAGACTTTGTTAG+AGG | 0.346933 | 5.4:+71559133 | MS.gene038262:CDS |
AGAGGCCTCAAGAAAGTAAA+TGG | 0.349713 | 5.4:+71558378 | MS.gene038262:CDS |
TATTCCTCTCTCAATCTTAT+CGG | 0.350332 | 5.4:-71559051 | None:intergenic |
ATAAGATTGAGAGAGGAATA+AGG | 0.350503 | 5.4:+71559054 | MS.gene038262:CDS |
TTTCCTCTGCTTCGGGAGTA+GGG | 0.362142 | 5.4:+71558596 | MS.gene038262:CDS |
AGGAACCTAGATCGGAGGTT+GGG | 0.389575 | 5.4:-71557993 | None:intergenic |
TGATGACCAAGACAGTTATT+CGG | 0.391428 | 5.4:-71557876 | None:intergenic |
AGCTTCGAGGAGAGCATTCA+TGG | 0.397607 | 5.4:-71558016 | None:intergenic |
ACTTCCGGTGTTGCTTCCCT+TGG | 0.413686 | 5.4:+71558186 | MS.gene038262:CDS |
AATAAGGAGTGTGTTGGATA+AGG | 0.419886 | 5.4:+71559070 | MS.gene038262:CDS |
ACCAAACCTAAATCATAAAG+AGG | 0.431163 | 5.4:-71558741 | None:intergenic |
GATTATAGGATGAAGTTTAG+TGG | 0.436406 | 5.4:+71559005 | MS.gene038262:CDS |
AGAGGTCCCACCGGATATAT+CGG | 0.437971 | 5.4:-71558480 | None:intergenic |
GCACATGCTGTTGAGAATAG+TGG | 0.446582 | 5.4:+71558651 | MS.gene038262:CDS |
AAACCATGAGCCCAAAACTA+AGG | 0.449479 | 5.4:+71558506 | MS.gene038262:CDS |
TTGGGCTCATGGTTTAATAG+AGG | 0.453888 | 5.4:-71558498 | None:intergenic |
AGGAGTGTGTTGGATAAGGA+TGG | 0.460546 | 5.4:+71559074 | MS.gene038262:CDS |
TAGTCAAGCTGAGAAGCTTA+AGG | 0.464105 | 5.4:+71559916 | MS.gene038262:CDS |
ACTCAAGGGTGGAAACTAGA+TGG | 0.464694 | 5.4:-71557819 | None:intergenic |
ATCGGTATATCTGATAGATC+TGG | 0.467328 | 5.4:-71558462 | None:intergenic |
GGAACCTAGATCGGAGGTTG+GGG | 0.474895 | 5.4:-71557992 | None:intergenic |
CTTTCTTGAGGCCTCTTGCA+AGG | 0.480558 | 5.4:-71558371 | None:intergenic |
CACATGCTGTTGAGAATAGT+GGG | 0.487195 | 5.4:+71558652 | MS.gene038262:CDS |
TCTTTATGTAGCACAAAACT+AGG | 0.492744 | 5.4:-71558327 | None:intergenic |
GAGAGGAATAAGGAGTGTGT+TGG | 0.494443 | 5.4:+71559064 | MS.gene038262:CDS |
ATTATCCCTTCACCTGGTGT+TGG | 0.494874 | 5.4:+71557796 | MS.gene038262:CDS |
TCCTTCTCTAGTAGTGAGGT+TGG | 0.495743 | 5.4:-71558067 | None:intergenic |
GGAATGGGGTTGGCAAAACT+CGG | 0.502950 | 5.4:-71558291 | None:intergenic |
CTCATTGGCAACATCAATCA+TGG | 0.505584 | 5.4:-71558136 | None:intergenic |
TTGTCCAGAGCAGTTGGAAA+AGG | 0.506615 | 5.4:-71559951 | None:intergenic |
ATCAGATATACCGATATATC+CGG | 0.508683 | 5.4:+71558470 | MS.gene038262:CDS |
ACATCGGTTTCTGTTGCGTA+TGG | 0.512068 | 5.4:-71557904 | None:intergenic |
CTCTGGACAATGCGGCTCGA+AGG | 0.524433 | 5.4:+71559964 | MS.gene038262:CDS |
GCCGCATTGTCCAGAGCAGT+TGG | 0.527352 | 5.4:-71559957 | None:intergenic |
AGTAAGAAGACTTTGTTAGA+GGG | 0.528649 | 5.4:+71559134 | MS.gene038262:CDS |
TAAGAGAATCAGAGATGGGA+AGG | 0.528717 | 5.4:-71557939 | None:intergenic |
TTAGAAGCTTCGCGAACTCA+AGG | 0.529238 | 5.4:-71557834 | None:intergenic |
TGTTTGGTTTCTGAGCTTCG+AGG | 0.530496 | 5.4:-71558029 | None:intergenic |
AACATTAAGAGAATCAGAGA+TGG | 0.531012 | 5.4:-71557944 | None:intergenic |
TAATGCCATTTACTTTCTTG+AGG | 0.542987 | 5.4:-71558383 | None:intergenic |
CTGCGTAAACCTCCAGCAAA+GGG | 0.551985 | 5.4:+71558693 | MS.gene038262:CDS |
CCGTCTCCGAATAACTGTCT+TGG | 0.552299 | 5.4:+71557870 | MS.gene038262:CDS |
CAAACCAAGGGAAGCAACAC+CGG | 0.555258 | 5.4:-71558190 | None:intergenic |
CAGAGGAAAACTACGGAGGA+AGG | 0.556586 | 5.4:-71558582 | None:intergenic |
CTTGTCCTTCTCTAGTAGTG+AGG | 0.557992 | 5.4:-71558071 | None:intergenic |
GTAATCAGAGGGTGCAGCCA+TGG | 0.558153 | 5.4:-71558718 | None:intergenic |
ACTACTAGAGAAGGACAAGA+TGG | 0.559150 | 5.4:+71558075 | MS.gene038262:CDS |
GAGGAACCTAGATCGGAGGT+TGG | 0.559318 | 5.4:-71557994 | None:intergenic |
TTATTCGGAGACGGCTATCA+CGG | 0.561361 | 5.4:-71557861 | None:intergenic |
GAATGGGGTTGGCAAAACTC+GGG | 0.562761 | 5.4:-71558290 | None:intergenic |
TCTGCGTAAACCTCCAGCAA+AGG | 0.567676 | 5.4:+71558692 | MS.gene038262:CDS |
AAGAAGACTTTGTTAGAGGG+TGG | 0.571832 | 5.4:+71559137 | MS.gene038262:CDS |
TTCCTCTGCTTCGGGAGTAG+GGG | 0.571882 | 5.4:+71558597 | MS.gene038262:CDS |
GATAGGTGTGGATATTGCAT+TGG | 0.571980 | 5.4:+71558983 | MS.gene038262:intron |
GAAGTGAAGAAAACGAGTGT+AGG | 0.573420 | 5.4:-71558168 | None:intergenic |
AAGTGAAGAAAACGAGTGTA+GGG | 0.575345 | 5.4:-71558167 | None:intergenic |
ATTCATGGAGGAACCTAGAT+CGG | 0.583676 | 5.4:-71558001 | None:intergenic |
AACCATGAGCCCAAAACTAA+GGG | 0.584006 | 5.4:+71558507 | MS.gene038262:CDS |
GCCATGGTGCCCTTTGCTGG+AGG | 0.584110 | 5.4:-71558702 | None:intergenic |
AGATGGCCAACACCAGGTGA+AGG | 0.584388 | 5.4:-71557802 | None:intergenic |
TCCAACCTCACTACTAGAGA+AGG | 0.584554 | 5.4:+71558066 | MS.gene038262:CDS |
AACCCCTACTCCCGAAGCAG+AGG | 0.587033 | 5.4:-71558599 | None:intergenic |
CAGATGACCTAAATAAGTGT+AGG | 0.589488 | 5.4:-71559165 | None:intergenic |
TCATAAAGAGGGTAATCAGA+GGG | 0.590052 | 5.4:-71558729 | None:intergenic |
TGTAGGGACAGAGAACTCAT+TGG | 0.592197 | 5.4:-71558151 | None:intergenic |
TGTGTTGGATAAGGATGGAG+AGG | 0.597874 | 5.4:+71559079 | MS.gene038262:CDS |
CAGGATGAAGAAAGCAGAAG+TGG | 0.599642 | 5.4:+71557771 | None:intergenic |
AAGATAAAGATTCAAACCAA+GGG | 0.600984 | 5.4:-71558202 | None:intergenic |
ACATTAAGAGAATCAGAGAT+GGG | 0.601363 | 5.4:-71557943 | None:intergenic |
GAAGATAAAGATTCAAACCA+AGG | 0.603452 | 5.4:-71558203 | None:intergenic |
GAAACTAGATGGCCAACACC+AGG | 0.604275 | 5.4:-71557808 | None:intergenic |
TAGAAGCTTCGCGAACTCAA+GGG | 0.612789 | 5.4:-71557833 | None:intergenic |
ATAGTGGGGCACGCTTCGTG+TGG | 0.617299 | 5.4:+71558667 | MS.gene038262:CDS |
GATGGCCAACACCAGGTGAA+GGG | 0.618837 | 5.4:-71557801 | None:intergenic |
ACCTCCAGCAAAGGGCACCA+TGG | 0.622718 | 5.4:+71558701 | MS.gene038262:CDS |
ATTCTGATGATATCATGAAG+TGG | 0.626846 | 5.4:+71558544 | MS.gene038262:CDS |
TCAGCTGCTACAGCAGAATG+AGG | 0.627027 | 5.4:+71558260 | MS.gene038262:CDS |
GTGGTGATTATCCCTTCACC+TGG | 0.627475 | 5.4:+71557790 | MS.gene038262:CDS |
CCAAGACAGTTATTCGGAGA+CGG | 0.627685 | 5.4:-71557870 | None:intergenic |
AAGAGAATCAGAGATGGGAA+GGG | 0.628212 | 5.4:-71557938 | None:intergenic |
CCCGAAGCAGAGGAAAACTA+CGG | 0.629010 | 5.4:-71558589 | None:intergenic |
CCAAACCTAAATCATAAAGA+GGG | 0.629774 | 5.4:-71558740 | None:intergenic |
GGGGTTGGCAAAACTCGGGA+TGG | 0.633072 | 5.4:-71558286 | None:intergenic |
TGGTTTAATAGAGGTCCCAC+CGG | 0.636493 | 5.4:-71558489 | None:intergenic |
ATCATAAAGAGGGTAATCAG+AGG | 0.637927 | 5.4:-71558730 | None:intergenic |
AGATATACCGATATATCCGG+TGG | 0.639117 | 5.4:+71558473 | MS.gene038262:CDS |
GGGGATGCGAACATTCTGGA+AGG | 0.639357 | 5.4:-71557972 | None:intergenic |
TCCAACTGCTCTGGACAATG+CGG | 0.642092 | 5.4:+71559956 | MS.gene038262:CDS |
AAGGGATTTAGTGTAGACAT+CGG | 0.643470 | 5.4:-71557920 | None:intergenic |
TGTCAACAACGAAGGCGTCG+AGG | 0.644178 | 5.4:-71558101 | None:intergenic |
AAGCTTCGCGAACTCAAGGG+TGG | 0.644702 | 5.4:-71557830 | None:intergenic |
GATATACCGATATATCCGGT+GGG | 0.645984 | 5.4:+71558474 | MS.gene038262:CDS |
AGTGCCGATAAGATTGAGAG+AGG | 0.653284 | 5.4:+71559047 | MS.gene038262:CDS |
AGGAAAACTACGGAGGAAGG+AGG | 0.665308 | 5.4:-71558579 | None:intergenic |
CATGGAGGAACCTAGATCGG+AGG | 0.677098 | 5.4:-71557998 | None:intergenic |
GCAGAACATGTCAACAACGA+AGG | 0.691886 | 5.4:-71558109 | None:intergenic |
GAAGCAGAGGAAAACTACGG+AGG | 0.710914 | 5.4:-71558586 | None:intergenic |
TTCGAGGAGAGCATTCATGG+AGG | 0.713047 | 5.4:-71558013 | None:intergenic |
GAACCTAGATCGGAGGTTGG+GGG | 0.729475 | 5.4:-71557991 | None:intergenic |
ATTGGCAACATCAATCATGG+TGG | 0.736671 | 5.4:-71558133 | None:intergenic |
ACATGCTGTTGAGAATAGTG+GGG | 0.746078 | 5.4:+71558653 | MS.gene038262:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAATTATCCTAGTATATA+AGG | + | chr5.4:71559217-71559236 | MS.gene038262:intron | 15.0% |
!! | AGATAAAACAAAAAATCCAA+AGG | - | chr5.4:71559276-71559295 | None:intergenic | 20.0% |
!! | GATTGATTATATTATGAATC+AGG | + | chr5.4:71559187-71559206 | MS.gene038262:CDS | 20.0% |
!!! | TTTGGATTTTTTGTTTTATC+TGG | + | chr5.4:71559275-71559294 | MS.gene038262:intron | 20.0% |
! | AAGATAAAGATTCAAACCAA+GGG | - | chr5.4:71558205-71558224 | None:intergenic | 25.0% |
! | ATTATCCTAGTATATAAGGT+TGG | + | chr5.4:71559221-71559240 | MS.gene038262:intron | 25.0% |
! | GGTATACAACATTAAAACAA+AGG | + | chr5.4:71559788-71559807 | MS.gene038262:intron | 25.0% |
! | TGAAAATGAGAAATATCCAT+AGG | - | chr5.4:71559688-71559707 | None:intergenic | 25.0% |
!! | TTTTCTGTATTGTATTCCTT+TGG | + | chr5.4:71559257-71559276 | MS.gene038262:intron | 25.0% |
!! | TTTTGTGCTACATAAAGAAT+GGG | + | chr5.4:71558332-71558351 | MS.gene038262:CDS | 25.0% |
!!! | CTGGTCTTTATGATTTTTTT+TGG | + | chr5.4:71559346-71559365 | MS.gene038262:intron | 25.0% |
AACATTAAGAGAATCAGAGA+TGG | - | chr5.4:71557947-71557966 | None:intergenic | 30.0% | |
AACCTTAAACCATTTGACAA+GGG | + | chr5.4:71559846-71559865 | MS.gene038262:intron | 30.0% | |
ACATTAAGAGAATCAGAGAT+GGG | - | chr5.4:71557946-71557965 | None:intergenic | 30.0% | |
ACCAAACCTAAATCATAAAG+AGG | - | chr5.4:71558744-71558763 | None:intergenic | 30.0% | |
AGTAAGAAGACTTTGTTAGA+GGG | + | chr5.4:71559134-71559153 | MS.gene038262:CDS | 30.0% | |
ATAAGATTGAGAGAGGAATA+AGG | + | chr5.4:71559054-71559073 | MS.gene038262:CDS | 30.0% | |
ATCAGATATACCGATATATC+CGG | + | chr5.4:71558470-71558489 | MS.gene038262:CDS | 30.0% | |
ATTCTGATGATATCATGAAG+TGG | + | chr5.4:71558544-71558563 | MS.gene038262:CDS | 30.0% | |
CCAAACCTAAATCATAAAGA+GGG | - | chr5.4:71558743-71558762 | None:intergenic | 30.0% | |
GAAGATAAAGATTCAAACCA+AGG | - | chr5.4:71558206-71558225 | None:intergenic | 30.0% | |
GATATTCATTAACCACGATT+TGG | + | chr5.4:71559573-71559592 | MS.gene038262:intron | 30.0% | |
GATTACCCTCTTTATGATTT+AGG | + | chr5.4:71558735-71558754 | MS.gene038262:CDS | 30.0% | |
GATTATAGGATGAAGTTTAG+TGG | + | chr5.4:71559005-71559024 | MS.gene038262:CDS | 30.0% | |
TAACCTTAAACCATTTGACA+AGG | + | chr5.4:71559845-71559864 | MS.gene038262:intron | 30.0% | |
TATTCCTCTCTCAATCTTAT+CGG | - | chr5.4:71559054-71559073 | None:intergenic | 30.0% | |
TCAAAATATCACTTCTCCTA+TGG | + | chr5.4:71559669-71559688 | MS.gene038262:intron | 30.0% | |
TCGTGGTTAATTGTGTTAAA+TGG | + | chr5.4:71559617-71559636 | MS.gene038262:intron | 30.0% | |
TCTTTATGTAGCACAAAACT+AGG | - | chr5.4:71558330-71558349 | None:intergenic | 30.0% | |
TGGATATTGCATTGGATTAT+AGG | + | chr5.4:71558991-71559010 | MS.gene038262:CDS | 30.0% | |
! | AAACTAGGCAATGATTTTGA+AGG | - | chr5.4:71558315-71558334 | None:intergenic | 30.0% |
! | GTTTTGTGCTACATAAAGAA+TGG | + | chr5.4:71558331-71558350 | MS.gene038262:CDS | 30.0% |
! | TAATGCCATTTACTTTCTTG+AGG | - | chr5.4:71558386-71558405 | None:intergenic | 30.0% |
! | TTTTGATGAAGATCAGGTTA+AGG | + | chr5.4:71558623-71558642 | MS.gene038262:CDS | 30.0% |
AAAATATATGCTCTCGAGTG+TGG | - | chr5.4:71558889-71558908 | None:intergenic | 35.0% | |
AAACGTGCATTTGAAAATCG+TGG | + | chr5.4:71559600-71559619 | MS.gene038262:intron | 35.0% | |
AAGGGATTTAGTGTAGACAT+CGG | - | chr5.4:71557923-71557942 | None:intergenic | 35.0% | |
AAGTGAAGAAAACGAGTGTA+GGG | - | chr5.4:71558170-71558189 | None:intergenic | 35.0% | |
ACCTTAAACCATTTGACAAG+GGG | + | chr5.4:71559847-71559866 | MS.gene038262:intron | 35.0% | |
AGATTGGAAGGATAATTGGA+TGG | + | chr5.4:71558796-71558815 | MS.gene038262:intron | 35.0% | |
ATCATAAAGAGGGTAATCAG+AGG | - | chr5.4:71558733-71558752 | None:intergenic | 35.0% | |
ATCCTAGTATATAAGGTTGG+AGG | + | chr5.4:71559224-71559243 | MS.gene038262:intron | 35.0% | |
ATCGGTATATCTGATAGATC+TGG | - | chr5.4:71558465-71558484 | None:intergenic | 35.0% | |
CAGATGACCTAAATAAGTGT+AGG | - | chr5.4:71559168-71559187 | None:intergenic | 35.0% | |
CATCAGCTGTGTATGAATAT+AGG | + | chr5.4:71559549-71559568 | MS.gene038262:intron | 35.0% | |
CATGCTCAATCCTACTAAAA+AGG | - | chr5.4:71559308-71559327 | None:intergenic | 35.0% | |
GAGTAAGAAGACTTTGTTAG+AGG | + | chr5.4:71559133-71559152 | MS.gene038262:CDS | 35.0% | |
GATTGGAAGGATAATTGGAT+GGG | + | chr5.4:71558797-71558816 | MS.gene038262:intron | 35.0% | |
GGATCTTCCTACACTTATTT+AGG | + | chr5.4:71559158-71559177 | MS.gene038262:CDS | 35.0% | |
TCATAAAGAGGGTAATCAGA+GGG | - | chr5.4:71558732-71558751 | None:intergenic | 35.0% | |
TCCAATTATCCTTCCAATCT+CGG | - | chr5.4:71558796-71558815 | None:intergenic | 35.0% | |
TCCTAGTATATAAGGTTGGA+GGG | + | chr5.4:71559225-71559244 | MS.gene038262:intron | 35.0% | |
TGATGACCAAGACAGTTATT+CGG | - | chr5.4:71557879-71557898 | None:intergenic | 35.0% | |
TGCAAATAAGCTGTTTATCG+CGG | - | chr5.4:71559432-71559451 | None:intergenic | 35.0% | |
! | AATAAGGAGTGTGTTGGATA+AGG | + | chr5.4:71559070-71559089 | MS.gene038262:CDS | 35.0% |
! | ACAGGCTAATGCTTTTGAAT+TGG | + | chr5.4:71558947-71558966 | MS.gene038262:intron | 35.0% |
! | CCCTCTTTATGATTTAGGTT+TGG | + | chr5.4:71558740-71558759 | MS.gene038262:intron | 35.0% |
! | TATATAAGGTTGGAGGGTAT+TGG | + | chr5.4:71559231-71559250 | MS.gene038262:intron | 35.0% |
!! | ACACTCGAGAGCATATATTT+TGG | + | chr5.4:71558888-71558907 | MS.gene038262:intron | 35.0% |
!! | AGGCAATGATTTTGAAGGAA+TGG | - | chr5.4:71558310-71558329 | None:intergenic | 35.0% |
!! | GCAATGATTTTGAAGGAATG+GGG | - | chr5.4:71558308-71558327 | None:intergenic | 35.0% |
!! | GGCAATGATTTTGAAGGAAT+GGG | - | chr5.4:71558309-71558328 | None:intergenic | 35.0% |
!! | TGGTACTACACCTTTTTAGT+AGG | + | chr5.4:71559295-71559314 | MS.gene038262:intron | 35.0% |
!!! | GAGACAGCTTGTTTTATGTT+TGG | - | chr5.4:71558048-71558067 | None:intergenic | 35.0% |
!!! | GGGTTATTTTGATGAAGATC+AGG | + | chr5.4:71558617-71558636 | MS.gene038262:CDS | 35.0% |
!!! | TTAGGTTTGGTTTTACCTGA+AGG | + | chr5.4:71558753-71558772 | MS.gene038262:intron | 35.0% |
!!! | TTTTTTATGAGCCTTGCAAG+AGG | + | chr5.4:71558360-71558379 | MS.gene038262:CDS | 35.0% |
AAACAAATCCTCCTATGGCT+GGG | - | chr5.4:71558848-71558867 | None:intergenic | 40.0% | |
AAACCATGAGCCCAAAACTA+AGG | + | chr5.4:71558506-71558525 | MS.gene038262:CDS | 40.0% | |
AACCATGAGCCCAAAACTAA+GGG | + | chr5.4:71558507-71558526 | MS.gene038262:CDS | 40.0% | |
AAGAAGACTTTGTTAGAGGG+TGG | + | chr5.4:71559137-71559156 | MS.gene038262:CDS | 40.0% | |
AAGAGAATCAGAGATGGGAA+GGG | - | chr5.4:71557941-71557960 | None:intergenic | 40.0% | |
ACATGCTGTTGAGAATAGTG+GGG | + | chr5.4:71558653-71558672 | MS.gene038262:CDS | 40.0% | |
ACCCTCCAACCTTATATACT+AGG | - | chr5.4:71559229-71559248 | None:intergenic | 40.0% | |
ACTACTAGAGAAGGACAAGA+TGG | + | chr5.4:71558075-71558094 | MS.gene038262:CDS | 40.0% | |
AGAGGCCTCAAGAAAGTAAA+TGG | + | chr5.4:71558378-71558397 | MS.gene038262:CDS | 40.0% | |
AGATATACCGATATATCCGG+TGG | + | chr5.4:71558473-71558492 | MS.gene038262:CDS | 40.0% | |
ATACCATGCTTACCTGCATT+TGG | - | chr5.4:71559773-71559792 | None:intergenic | 40.0% | |
ATGCGAAACAAATCCTCCTA+TGG | - | chr5.4:71558853-71558872 | None:intergenic | 40.0% | |
ATTCATGGAGGAACCTAGAT+CGG | - | chr5.4:71558004-71558023 | None:intergenic | 40.0% | |
ATTGGCAACATCAATCATGG+TGG | - | chr5.4:71558136-71558155 | None:intergenic | 40.0% | |
CACATGCTGTTGAGAATAGT+GGG | + | chr5.4:71558652-71558671 | MS.gene038262:CDS | 40.0% | |
CTCATTGGCAACATCAATCA+TGG | - | chr5.4:71558139-71558158 | None:intergenic | 40.0% | |
GAAGTGAAGAAAACGAGTGT+AGG | - | chr5.4:71558171-71558190 | None:intergenic | 40.0% | |
GACATAAGGAGGATCTCATA+AGG | - | chr5.4:71559884-71559903 | None:intergenic | 40.0% | |
GATAGGTGTGGATATTGCAT+TGG | + | chr5.4:71558983-71559002 | MS.gene038262:intron | 40.0% | |
GATATACCGATATATCCGGT+GGG | + | chr5.4:71558474-71558493 | MS.gene038262:CDS | 40.0% | |
GTTCGATCTAAGAATCCTTC+AGG | - | chr5.4:71558771-71558790 | None:intergenic | 40.0% | |
TAACCAAAGCCTCTGACATA+AGG | - | chr5.4:71559898-71559917 | None:intergenic | 40.0% | |
TAAGAGAATCAGAGATGGGA+AGG | - | chr5.4:71557942-71557961 | None:intergenic | 40.0% | |
TAGTCAAGCTGAGAAGCTTA+AGG | + | chr5.4:71559916-71559935 | MS.gene038262:CDS | 40.0% | |
TAGTTGATCCCCTTGTCAAA+TGG | - | chr5.4:71559858-71559877 | None:intergenic | 40.0% | |
TCCCCTTGTCAAATGGTTTA+AGG | - | chr5.4:71559851-71559870 | None:intergenic | 40.0% | |
TCTATGAAACTGCCAAATGC+AGG | + | chr5.4:71559758-71559777 | MS.gene038262:intron | 40.0% | |
TTGGGCTCATGGTTTAATAG+AGG | - | chr5.4:71558501-71558520 | None:intergenic | 40.0% | |
! | ACACTCGTTTTCTTCACTTC+CGG | + | chr5.4:71558171-71558190 | MS.gene038262:CDS | 40.0% |
!! | TCAACAGTGCCCTTAGTTTT+GGG | - | chr5.4:71558519-71558538 | None:intergenic | 40.0% |
!! | TGATTTTGAAGGAATGGGGT+TGG | - | chr5.4:71558304-71558323 | None:intergenic | 40.0% |
ACTCAAGGGTGGAAACTAGA+TGG | - | chr5.4:71557822-71557841 | None:intergenic | 45.0% | |
ATTATCCCTTCACCTGGTGT+TGG | + | chr5.4:71557796-71557815 | MS.gene038262:CDS | 45.0% | |
CCAAGACAGTTATTCGGAGA+CGG | - | chr5.4:71557873-71557892 | None:intergenic | 45.0% | |
CTTGTCCTTCTCTAGTAGTG+AGG | - | chr5.4:71558074-71558093 | None:intergenic | 45.0% | |
GAAACAAATCCTCCTATGGC+TGG | - | chr5.4:71558849-71558868 | None:intergenic | 45.0% | |
GCACATGCTGTTGAGAATAG+TGG | + | chr5.4:71558651-71558670 | MS.gene038262:CDS | 45.0% | |
GCACGTTTGAATCCAAATCG+TGG | - | chr5.4:71559588-71559607 | None:intergenic | 45.0% | |
GCAGAACATGTCAACAACGA+AGG | - | chr5.4:71558112-71558131 | None:intergenic | 45.0% | |
GCCGAGATTGGAAGGATAAT+TGG | + | chr5.4:71558792-71558811 | MS.gene038262:intron | 45.0% | |
GTTCTGTACTCAAGTTCTGC+TGG | + | chr5.4:71559327-71559346 | MS.gene038262:intron | 45.0% | |
TAGAAGCTTCGCGAACTCAA+GGG | - | chr5.4:71557836-71557855 | None:intergenic | 45.0% | |
TCCAACCTCACTACTAGAGA+AGG | + | chr5.4:71558066-71558085 | MS.gene038262:CDS | 45.0% | |
TCCTTCTCTAGTAGTGAGGT+TGG | - | chr5.4:71558070-71558089 | None:intergenic | 45.0% | |
TGAGATCCTCCTTATGTCAG+AGG | + | chr5.4:71559886-71559905 | MS.gene038262:intron | 45.0% | |
TGGTTTAATAGAGGTCCCAC+CGG | - | chr5.4:71558492-71558511 | None:intergenic | 45.0% | |
TGTAGGGACAGAGAACTCAT+TGG | - | chr5.4:71558154-71558173 | None:intergenic | 45.0% | |
TGTGTTGGATAAGGATGGAG+AGG | + | chr5.4:71559079-71559098 | MS.gene038262:CDS | 45.0% | |
TTAGAAGCTTCGCGAACTCA+AGG | - | chr5.4:71557837-71557856 | None:intergenic | 45.0% | |
TTAGATCGAACAGCCGAGAT+TGG | + | chr5.4:71558780-71558799 | MS.gene038262:intron | 45.0% | |
TTATTCGGAGACGGCTATCA+CGG | - | chr5.4:71557864-71557883 | None:intergenic | 45.0% | |
TTGTCCAGAGCAGTTGGAAA+AGG | - | chr5.4:71559954-71559973 | None:intergenic | 45.0% | |
! | AGGAGTGTGTTGGATAAGGA+TGG | + | chr5.4:71559074-71559093 | MS.gene038262:CDS | 45.0% |
! | GAGAGGAATAAGGAGTGTGT+TGG | + | chr5.4:71559064-71559083 | MS.gene038262:CDS | 45.0% |
! | GATTTGTTTCGCATTGTGGC+TGG | + | chr5.4:71558859-71558878 | MS.gene038262:intron | 45.0% |
! | GGAGGATTTGTTTCGCATTG+TGG | + | chr5.4:71558855-71558874 | MS.gene038262:intron | 45.0% |
! | GTCAACAGTGCCCTTAGTTT+TGG | - | chr5.4:71558520-71558539 | None:intergenic | 45.0% |
! | TCCGTAGTTTTCCTCTGCTT+CGG | + | chr5.4:71558588-71558607 | MS.gene038262:CDS | 45.0% |
! | TGTTTGGTTTCTGAGCTTCG+AGG | - | chr5.4:71558032-71558051 | None:intergenic | 45.0% |
!! | ACATCGGTTTCTGTTGCGTA+TGG | - | chr5.4:71557907-71557926 | None:intergenic | 45.0% |
!! | AGTGCCGATAAGATTGAGAG+AGG | + | chr5.4:71559047-71559066 | MS.gene038262:CDS | 45.0% |
AAATCCTCCTATGGCTGGGT+GGG | - | chr5.4:71558844-71558863 | None:intergenic | 50.0% | |
AGAGGTCCCACCGGATATAT+CGG | - | chr5.4:71558483-71558502 | None:intergenic | 50.0% | |
AGGAAAACTACGGAGGAAGG+AGG | - | chr5.4:71558582-71558601 | None:intergenic | 50.0% | |
AGGAACCTAGATCGGAGGTT+GGG | - | chr5.4:71557996-71558015 | None:intergenic | 50.0% | |
ATCGAACAGCCGAGATTGGA+AGG | + | chr5.4:71558784-71558803 | MS.gene038262:intron | 50.0% | |
CAAACCAAGGGAAGCAACAC+CGG | - | chr5.4:71558193-71558212 | None:intergenic | 50.0% | |
CAGAGGAAAACTACGGAGGA+AGG | - | chr5.4:71558585-71558604 | None:intergenic | 50.0% | |
CCAAAGCCTCTGACATAAGG+AGG | - | chr5.4:71559895-71559914 | None:intergenic | 50.0% | |
CCCGAAGCAGAGGAAAACTA+CGG | - | chr5.4:71558592-71558611 | None:intergenic | 50.0% | |
CCGTCTCCGAATAACTGTCT+TGG | + | chr5.4:71557870-71557889 | MS.gene038262:CDS | 50.0% | |
CCTCCTTATGTCAGAGGCTT+TGG | + | chr5.4:71559892-71559911 | MS.gene038262:intron | 50.0% | |
CTGCCAAATGCAGGTAAGCA+TGG | + | chr5.4:71559767-71559786 | MS.gene038262:intron | 50.0% | |
CTGCGTAAACCTCCAGCAAA+GGG | + | chr5.4:71558693-71558712 | MS.gene038262:CDS | 50.0% | |
CTTTCTTGAGGCCTCTTGCA+AGG | - | chr5.4:71558374-71558393 | None:intergenic | 50.0% | |
GAAACTAGATGGCCAACACC+AGG | - | chr5.4:71557811-71557830 | None:intergenic | 50.0% | |
GAAGCAGAGGAAAACTACGG+AGG | - | chr5.4:71558589-71558608 | None:intergenic | 50.0% | |
GCCACTCTTTGCTGAACAAC+AGG | + | chr5.4:71558929-71558948 | MS.gene038262:intron | 50.0% | |
GCCTGTTGTTCAGCAAAGAG+TGG | - | chr5.4:71558933-71558952 | None:intergenic | 50.0% | |
GTGGTGATTATCCCTTCACC+TGG | + | chr5.4:71557790-71557809 | MS.gene038262:CDS | 50.0% | |
TCAGCTGCTACAGCAGAATG+AGG | + | chr5.4:71558260-71558279 | MS.gene038262:CDS | 50.0% | |
TCTGCGTAAACCTCCAGCAA+AGG | + | chr5.4:71558692-71558711 | MS.gene038262:CDS | 50.0% | |
TTCAGCAAAGAGTGGCCATG+CGG | - | chr5.4:71558925-71558944 | None:intergenic | 50.0% | |
TTGGTGTGTGAGCTGCAGAT+AGG | + | chr5.4:71558966-71558985 | MS.gene038262:intron | 50.0% | |
TTTCCTCTGCTTCGGGAGTA+GGG | + | chr5.4:71558596-71558615 | MS.gene038262:CDS | 50.0% | |
! | CCGTAGTTTTCCTCTGCTTC+GGG | + | chr5.4:71558589-71558608 | MS.gene038262:CDS | 50.0% |
! | GAATGGGGTTGGCAAAACTC+GGG | - | chr5.4:71558293-71558312 | None:intergenic | 50.0% |
! | GACACCTTTTCCAACTGCTC+TGG | + | chr5.4:71559947-71559966 | MS.gene038262:CDS | 50.0% |
! | GGAATGGGGTTGGCAAAACT+CGG | - | chr5.4:71558294-71558313 | None:intergenic | 50.0% |
! | TCCAACTGCTCTGGACAATG+CGG | + | chr5.4:71559956-71559975 | MS.gene038262:CDS | 50.0% |
! | TTTTCCTCTGCTTCGGGAGT+AGG | + | chr5.4:71558595-71558614 | MS.gene038262:CDS | 50.0% |
!! | AGCTTCGAGGAGAGCATTCA+TGG | - | chr5.4:71558019-71558038 | None:intergenic | 50.0% |
!! | TTCGAGGAGAGCATTCATGG+AGG | - | chr5.4:71558016-71558035 | None:intergenic | 50.0% |
!!! | TGCCCTTAGTTTTGGGCTCA+TGG | - | chr5.4:71558512-71558531 | None:intergenic | 50.0% |
AAGAGTGGCCATGCGGCAAT+AGG | - | chr5.4:71558918-71558937 | None:intergenic | 55.0% | |
AAGCTTCGCGAACTCAAGGG+TGG | - | chr5.4:71557833-71557852 | None:intergenic | 55.0% | |
AGATGGCCAACACCAGGTGA+AGG | - | chr5.4:71557805-71557824 | None:intergenic | 55.0% | |
ATACTAGCCCACCCAGCCAT+AGG | + | chr5.4:71558834-71558853 | MS.gene038262:intron | 55.0% | |
CAAATCCTCCTATGGCTGGG+TGG | - | chr5.4:71558845-71558864 | None:intergenic | 55.0% | |
CATGGAGGAACCTAGATCGG+AGG | - | chr5.4:71558001-71558020 | None:intergenic | 55.0% | |
GAACCTAGATCGGAGGTTGG+GGG | - | chr5.4:71557994-71558013 | None:intergenic | 55.0% | |
GAGGAACCTAGATCGGAGGT+TGG | - | chr5.4:71557997-71558016 | None:intergenic | 55.0% | |
GATAATTGGATGGGCCCAGC+AGG | + | chr5.4:71558806-71558825 | MS.gene038262:intron | 55.0% | |
GATGGCCAACACCAGGTGAA+GGG | - | chr5.4:71557804-71557823 | None:intergenic | 55.0% | |
GGAACCTAGATCGGAGGTTG+GGG | - | chr5.4:71557995-71558014 | None:intergenic | 55.0% | |
GGGGATGCGAACATTCTGGA+AGG | - | chr5.4:71557975-71557994 | None:intergenic | 55.0% | |
GTGTGAGCTGCAGATAGGTG+TGG | + | chr5.4:71558971-71558990 | MS.gene038262:intron | 55.0% | |
GTTGGGGGATGCGAACATTC+TGG | - | chr5.4:71557979-71557998 | None:intergenic | 55.0% | |
TTCCTCTGCTTCGGGAGTAG+GGG | + | chr5.4:71558597-71558616 | MS.gene038262:CDS | 55.0% | |
TTGGTGTGCCTATTGCCGCA+TGG | + | chr5.4:71558907-71558926 | MS.gene038262:intron | 55.0% | |
! | GTAATCAGAGGGTGCAGCCA+TGG | - | chr5.4:71558721-71558740 | None:intergenic | 55.0% |
!! | ACTTCCGGTGTTGCTTCCCT+TGG | + | chr5.4:71558186-71558205 | MS.gene038262:CDS | 55.0% |
!! | TGTCAACAACGAAGGCGTCG+AGG | - | chr5.4:71558104-71558123 | None:intergenic | 55.0% |
AACCCCTACTCCCGAAGCAG+AGG | - | chr5.4:71558602-71558621 | None:intergenic | 60.0% | |
CATCCCCCAACCTCCGATCT+AGG | + | chr5.4:71557988-71558007 | MS.gene038262:CDS | 60.0% | |
CTCTGGACAATGCGGCTCGA+AGG | + | chr5.4:71559964-71559983 | MS.gene038262:CDS | 60.0% | |
GCCGCATTGTCCAGAGCAGT+TGG | - | chr5.4:71559960-71559979 | None:intergenic | 60.0% | |
GGCTAGTATCTGGGCCTGCT+GGG | - | chr5.4:71558823-71558842 | None:intergenic | 60.0% | |
! | ATAGTGGGGCACGCTTCGTG+TGG | + | chr5.4:71558667-71558686 | MS.gene038262:CDS | 60.0% |
! | GGGGTTGGCAAAACTCGGGA+TGG | - | chr5.4:71558289-71558308 | None:intergenic | 60.0% |
!! | ACCTCCAGCAAAGGGCACCA+TGG | + | chr5.4:71558701-71558720 | MS.gene038262:CDS | 60.0% |
!! | GGCTGGGTGGGCTAGTATCT+GGG | - | chr5.4:71558832-71558851 | None:intergenic | 60.0% |
!! | TGGCTGGGTGGGCTAGTATC+TGG | - | chr5.4:71558833-71558852 | None:intergenic | 60.0% |
CTAGCCCACCCAGCCATAGG+AGG | + | chr5.4:71558837-71558856 | MS.gene038262:intron | 65.0% | |
GCAGCCATGGTGCCCTTTGC+TGG | - | chr5.4:71558708-71558727 | None:intergenic | 65.0% | |
GCCATGGTGCCCTTTGCTGG+AGG | - | chr5.4:71558705-71558724 | None:intergenic | 65.0% | |
! | GGGCTAGTATCTGGGCCTGC+TGG | - | chr5.4:71558824-71558843 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 71557775 | 71559995 | 71557775 | ID=MS.gene038262 |
chr5.4 | mRNA | 71557775 | 71559995 | 71557775 | ID=MS.gene038262.t1;Parent=MS.gene038262 |
chr5.4 | exon | 71557775 | 71558756 | 71557775 | ID=MS.gene038262.t1.exon1;Parent=MS.gene038262.t1 |
chr5.4 | CDS | 71557775 | 71558756 | 71557775 | ID=cds.MS.gene038262.t1;Parent=MS.gene038262.t1 |
chr5.4 | exon | 71558988 | 71559208 | 71558988 | ID=MS.gene038262.t1.exon2;Parent=MS.gene038262.t1 |
chr5.4 | CDS | 71558988 | 71559208 | 71558988 | ID=cds.MS.gene038262.t1;Parent=MS.gene038262.t1 |
chr5.4 | exon | 71559906 | 71559995 | 71559906 | ID=MS.gene038262.t1.exon3;Parent=MS.gene038262.t1 |
chr5.4 | CDS | 71559906 | 71559995 | 71559906 | ID=cds.MS.gene038262.t1;Parent=MS.gene038262.t1 |
Gene Sequence |
Protein sequence |