AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038259

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038259.t1 MTR_5g090620 95.825 479 19 1 1 478 1 479 0.0 949
MS.gene038259.t1 MTR_5g090580 77.917 480 102 4 1 478 1 478 0.0 765
MS.gene038259.t1 MTR_5g090700 76.763 482 106 4 1 478 1 480 0.0 758
MS.gene038259.t1 MTR_5g090670 76.141 482 109 5 1 478 1 480 0.0 751
MS.gene038259.t1 MTR_5g090630 75.732 478 107 3 1 478 1 469 0.0 739
MS.gene038259.t1 MTR_5g090660 74.004 477 122 2 1 477 1 475 0.0 733
MS.gene038259.t1 MTR_5g090610 73.013 478 115 3 1 478 1 464 0.0 712
MS.gene038259.t1 MTR_5g090600 72.594 478 110 3 1 478 1 457 0.0 701
MS.gene038259.t1 MTR_5g098930 65.768 482 150 8 1 478 1 471 0.0 620
MS.gene038259.t1 MTR_5g090690 60.533 413 98 6 65 468 18 374 2.57e-153 441
MS.gene038259.t1 MTR_5g090650 64.489 352 92 4 1 352 1 319 6.08e-150 430
MS.gene038259.t1 MTR_2g040530 43.064 483 241 13 1 471 1 461 4.11e-120 360
MS.gene038259.t1 MTR_2g046820 42.562 484 242 14 1 472 1 460 1.36e-117 353
MS.gene038259.t1 MTR_2g046750 42.149 484 245 15 1 471 1 462 5.91e-117 352
MS.gene038259.t1 MTR_5g070040 41.393 488 244 17 2 475 8 467 8.41e-117 351
MS.gene038259.t1 MTR_5g070090 40.619 485 245 12 2 474 8 461 3.73e-114 344
MS.gene038259.t1 MTR_6g488280 35.041 488 266 18 3 470 4 460 2.78e-74 241
MS.gene038259.t1 MTR_0428s0010 35.041 488 266 18 3 470 4 460 2.78e-74 241
MS.gene038259.t1 MTR_8g465670 34.362 486 281 14 2 471 4 467 3.32e-74 241
MS.gene038259.t1 MTR_6g023665 34.647 482 278 15 2 470 10 467 3.15e-73 239
MS.gene038259.t1 MTR_7g117170 35.343 481 270 17 6 470 16 471 1.01e-72 238
MS.gene038259.t1 MTR_3g009510 32.790 491 292 16 1 471 1 473 1.02e-72 238
MS.gene038259.t1 MTR_8g006220 33.806 494 282 15 2 471 3 475 2.51e-72 237
MS.gene038259.t1 MTR_8g006730 31.601 481 296 13 2 470 3 462 1.99e-69 229
MS.gene038259.t1 MTR_8g027870 34.591 477 273 17 6 470 19 468 5.70e-69 228
MS.gene038259.t1 MTR_8g006710 31.557 488 298 14 2 476 3 467 2.14e-67 223
MS.gene038259.t1 MTR_8g006260 34.647 482 267 20 3 463 4 458 1.61e-66 221
MS.gene038259.t1 MTR_8g027885 34.447 479 271 19 6 470 19 468 1.70e-66 221
MS.gene038259.t1 MTR_8g006270 32.225 481 292 12 2 471 3 460 1.85e-66 221
MS.gene038259.t1 MTR_6g033675 29.735 491 294 12 3 472 2 462 2.57e-65 218
MS.gene038259.t1 MTR_0184s0040 32.150 479 295 13 2 470 18 476 5.36e-65 218
MS.gene038259.t1 MTR_0078s0190 32.150 479 295 13 2 470 18 476 5.36e-65 218
MS.gene038259.t1 MTR_8g009073 32.848 481 288 15 2 470 3 460 6.78e-65 217
MS.gene038259.t1 MTR_0184s0030 30.526 475 296 15 2 463 3 456 6.28e-64 214
MS.gene038259.t1 MTR_0078s0010 31.042 480 300 15 2 470 3 462 1.79e-63 213
MS.gene038259.t1 MTR_8g008970 33.402 485 280 17 2 470 3 460 6.05e-63 218
MS.gene038259.t1 MTR_8g008970 34.173 278 153 8 196 470 534 784 1.56e-35 140
MS.gene038259.t1 MTR_0078s0060 32.790 491 287 17 2 474 3 468 1.64e-62 211
MS.gene038259.t1 MTR_8g009067 32.922 486 283 16 2 471 3 461 2.43e-62 210
MS.gene038259.t1 MTR_8g077590 31.481 486 283 15 4 470 8 462 2.57e-62 210
MS.gene038259.t1 MTR_6g005600 31.950 482 292 16 3 470 4 463 2.95e-62 210
MS.gene038259.t1 MTR_7g047030 31.535 482 295 16 2 470 3 462 5.07e-61 207
MS.gene038259.t1 MTR_7g047270 31.535 482 295 16 2 470 3 462 5.07e-61 207
MS.gene038259.t1 MTR_8g074550 30.512 508 300 17 2 474 5 494 1.44e-60 206
MS.gene038259.t1 MTR_5g019580 31.034 493 294 16 2 470 4 474 1.84e-60 206
MS.gene038259.t1 MTR_8g009063 31.172 478 302 12 2 470 10 469 6.36e-60 204
MS.gene038259.t1 MTR_1g019510 31.818 484 288 16 2 470 3 459 9.88e-60 203
MS.gene038259.t1 MTR_8g009055 31.250 480 299 13 2 470 3 462 2.01e-59 202
MS.gene038259.t1 MTR_6g033625 29.328 491 292 14 3 470 2 460 3.83e-59 202
MS.gene038259.t1 MTR_6g033725 29.184 490 295 13 3 472 2 459 1.89e-58 200
MS.gene038259.t1 MTR_8g012635 29.485 485 292 15 2 463 3 460 3.45e-58 199
MS.gene038259.t1 MTR_8g009050 32.365 482 291 17 2 470 3 462 3.60e-58 199
MS.gene038259.t1 MTR_8g008990 31.743 482 296 15 2 470 3 464 6.43e-57 196
MS.gene038259.t1 MTR_8g012745 29.098 488 287 14 2 463 3 457 2.45e-56 194
MS.gene038259.t1 MTR_7g046490 30.185 487 294 17 2 471 3 460 2.53e-56 194
MS.gene038259.t1 MTR_6g033660 28.689 488 296 13 6 472 5 461 2.73e-56 194
MS.gene038259.t1 MTR_6g033615 30.579 484 281 14 3 470 2 446 2.10e-55 191
MS.gene038259.t1 MTR_8g012650 28.457 499 298 15 2 471 3 471 7.48e-55 191
MS.gene038259.t1 MTR_3g479520 28.738 515 287 15 2 477 12 485 2.67e-53 187
MS.gene038259.t1 MTR_8g066610 30.754 491 291 16 6 472 10 475 1.16e-52 185
MS.gene038259.t1 MTR_5g019580 30.266 489 275 17 2 470 56 498 2.04e-52 185
MS.gene038259.t1 MTR_8g009067 34.341 364 205 12 120 471 2 343 2.48e-52 181
MS.gene038259.t1 MTR_0536s0020 28.081 495 300 16 2 472 15 477 1.07e-51 182
MS.gene038259.t1 MTR_8g009073 34.582 347 201 11 132 470 3 331 8.09e-51 176
MS.gene038259.t1 MTR_5g029800 29.200 500 291 20 5 474 11 477 9.60e-50 177
MS.gene038259.t1 MTR_4g485630 28.370 497 299 17 2 472 6 471 2.61e-49 176
MS.gene038259.t1 MTR_4g117890 25.948 501 307 16 2 474 10 474 4.64e-49 175
MS.gene038259.t1 MTR_7g102460 28.175 504 310 15 3 477 7 487 7.68e-48 172
MS.gene038259.t1 MTR_7g102550 29.317 498 293 17 7 471 11 482 1.10e-47 171
MS.gene038259.t1 MTR_4g095008 30.521 403 237 12 87 475 92 465 1.42e-47 172
MS.gene038259.t1 MTR_4g117960 26.639 488 312 15 8 472 14 478 3.06e-47 170
MS.gene038259.t1 MTR_3g069710 28.831 496 281 14 2 476 9 453 5.47e-47 169
MS.gene038259.t1 MTR_6g035185 27.309 498 298 19 8 472 14 480 1.01e-45 166
MS.gene038259.t1 MTR_7g102490 29.331 508 301 19 3 477 7 489 1.65e-45 166
MS.gene038259.t1 MTR_4g094920 28.106 491 297 16 5 475 26 480 1.70e-45 166
MS.gene038259.t1 MTR_8g012730 34.286 280 136 8 194 462 54 296 1.96e-45 161
MS.gene038259.t1 MTR_2g034990 28.770 504 288 24 5 472 11 479 2.14e-45 165
MS.gene038259.t1 MTR_4g117980 29.293 495 291 19 8 472 14 479 2.32e-45 165
MS.gene038259.t1 MTR_4g118000 28.629 496 287 21 8 477 15 469 2.53e-45 165
MS.gene038259.t1 MTR_7g012120 27.778 486 313 14 5 472 16 481 2.79e-45 165
MS.gene038259.t1 MTR_5g067170 27.755 490 303 17 8 472 14 477 6.06e-45 164
MS.gene038259.t1 MTR_1g062380 27.416 507 304 18 6 476 17 495 2.23e-44 163
MS.gene038259.t1 MTR_7g102450 27.419 496 301 17 7 477 13 474 2.78e-44 162
MS.gene038259.t1 MTR_3g069690 27.200 500 290 16 2 478 5 453 3.43e-44 161
MS.gene038259.t1 MTR_2g035020 27.108 498 304 20 5 472 11 479 4.57e-44 162
MS.gene038259.t1 MTR_5g035580 26.253 499 283 16 6 476 14 455 5.51e-44 161
MS.gene038259.t1 MTR_3g079480 27.290 513 297 15 2 477 18 491 6.66e-44 161
MS.gene038259.t1 MTR_6g014290 24.462 511 315 12 2 477 7 481 1.47e-43 160
MS.gene038259.t1 MTR_3g479490 26.535 505 299 15 2 471 3 470 1.69e-43 160
MS.gene038259.t1 MTR_4g117950 28.974 497 288 17 2 472 3 460 2.88e-43 159
MS.gene038259.t1 MTR_5g016660 27.647 510 291 15 3 471 8 480 5.30e-43 159
MS.gene038259.t1 MTR_5g087620 26.448 518 309 17 2 478 7 493 5.92e-43 159
MS.gene038259.t1 MTR_6g035265 26.078 487 309 14 8 472 14 471 6.72e-43 158
MS.gene038259.t1 MTR_7g070800 27.921 505 288 20 6 472 7 473 7.55e-43 158
MS.gene038259.t1 MTR_4g485620 25.820 488 288 13 20 472 4 452 7.80e-43 158
MS.gene038259.t1 MTR_7g070940 28.367 490 307 16 2 472 6 470 8.74e-43 158
MS.gene038259.t1 MTR_8g064880 27.716 451 273 14 6 432 10 431 1.21e-42 158
MS.gene038259.t1 MTR_1g107360 26.518 494 304 17 5 477 9 464 1.23e-42 157
MS.gene038259.t1 MTR_0536s0010 26.477 491 307 16 2 472 18 474 1.37e-42 157
MS.gene038259.t1 MTR_4g094220 26.204 519 285 19 3 471 5 475 1.79e-42 157
MS.gene038259.t1 MTR_7g080900 24.691 486 310 13 2 472 9 453 1.91e-42 157
MS.gene038259.t1 MTR_1g107350 29.517 393 232 13 90 467 99 461 2.08e-42 157
MS.gene038259.t1 MTR_5g045970 26.367 512 302 21 6 476 17 494 2.14e-42 157
MS.gene038259.t1 MTR_7g071040 26.863 510 297 17 3 472 15 488 2.14e-42 157
MS.gene038259.t1 MTR_4g024020 26.430 507 314 13 3 475 7 488 2.59e-42 157
MS.gene038259.t1 MTR_5g464760 27.059 510 295 13 3 478 10 476 3.33e-42 156
MS.gene038259.t1 MTR_1g019520 40.553 217 113 6 259 470 3 208 4.09e-42 149
MS.gene038259.t1 MTR_5g072810 25.773 485 304 13 4 474 11 453 4.46e-42 155
MS.gene038259.t1 MTR_7g070860 27.168 519 268 21 2 472 4 460 4.83e-42 156
MS.gene038259.t1 MTR_2g098430 27.579 504 304 19 2 474 3 476 6.03e-42 156
MS.gene038259.t1 MTR_8g012630 40.187 214 105 8 260 463 204 404 7.43e-42 154
MS.gene038259.t1 MTR_6g014220 25.536 513 294 16 2 471 7 474 8.43e-42 155
MS.gene038259.t1 MTR_7g070740 28.346 508 291 19 3 472 9 481 8.69e-42 155
MS.gene038259.t1 MTR_3g008010 25.200 500 310 11 3 471 8 474 1.08e-41 155
MS.gene038259.t1 MTR_8g064870 25.813 492 314 15 5 474 11 473 1.27e-41 155
MS.gene038259.t1 MTR_7g070660 27.088 491 311 16 5 472 11 477 1.53e-41 155
MS.gene038259.t1 MTR_5g045960 27.290 513 306 19 2 477 6 488 1.55e-41 155
MS.gene038259.t1 MTR_8g044140 30.287 383 220 9 113 472 88 446 1.57e-41 154
MS.gene038259.t1 MTR_6g078320 27.950 483 299 16 4 462 10 467 2.10e-41 154
MS.gene038259.t1 MTR_6g038240 25.413 484 301 14 6 472 12 452 2.19e-41 154
MS.gene038259.t1 MTR_2g035040 28.238 386 242 14 107 472 14 384 3.78e-41 152
MS.gene038259.t1 MTR_4g082820 28.543 494 288 20 4 471 6 460 5.13e-41 153
MS.gene038259.t1 MTR_0891s0010 33.110 299 155 7 194 477 24 292 6.07e-41 148
MS.gene038259.t1 MTR_7g070610 27.071 495 309 18 6 472 14 484 6.58e-41 153
MS.gene038259.t1 MTR_8g466240 28.745 494 278 22 3 471 6 450 9.92e-41 152
MS.gene038259.t1 MTR_7g117405 27.435 503 300 18 7 477 14 483 2.76e-40 151
MS.gene038259.t1 MTR_7g070780 27.181 493 310 16 6 472 12 481 3.28e-40 151
MS.gene038259.t1 MTR_7g102560 26.535 505 308 17 7 477 11 486 3.52e-40 151
MS.gene038259.t1 MTR_6g014250 24.213 508 307 14 2 471 7 474 5.01e-40 150
MS.gene038259.t1 MTR_7g070810 28.081 495 305 17 2 472 6 473 5.10e-40 150
MS.gene038259.t1 MTR_7g055710 26.680 491 315 14 6 472 12 481 6.68e-40 150
MS.gene038259.t1 MTR_5g035560 26.547 501 279 17 6 476 12 453 9.85e-40 150
MS.gene038259.t1 MTR_4g082810 30.713 407 246 14 4 394 6 392 1.09e-39 148
MS.gene038259.t1 MTR_1g040310 28.081 495 301 16 5 472 15 481 1.10e-39 150
MS.gene038259.t1 MTR_6g014040 25.341 513 298 14 2 471 7 477 1.31e-39 149
MS.gene038259.t1 MTR_1g032490 26.166 493 309 15 5 474 10 470 1.40e-39 149
MS.gene038259.t1 MTR_3g479470 27.075 506 294 15 2 471 10 476 1.71e-39 149
MS.gene038259.t1 MTR_3g049970 25.852 499 309 17 5 477 9 472 2.12e-39 149
MS.gene038259.t1 MTR_0288s0020 24.851 503 293 16 2 471 7 457 3.77e-39 147
MS.gene038259.t1 MTR_5g039900 25.896 502 303 15 5 471 13 480 8.37e-39 147
MS.gene038259.t1 MTR_7g070910 27.680 513 289 21 3 472 9 482 9.92e-39 147
MS.gene038259.t1 MTR_1g107285 25.605 496 303 16 5 474 8 463 1.83e-38 146
MS.gene038259.t1 MTR_6g038200 25.156 481 292 16 4 463 10 443 2.10e-38 145
MS.gene038259.t1 MTR_4g108250 27.381 504 299 18 6 472 12 485 2.14e-38 146
MS.gene038259.t1 MTR_4g031800 25.703 498 314 16 2 474 6 472 2.55e-38 145
MS.gene038259.t1 MTR_7g102520 26.786 504 308 17 7 476 14 490 2.76e-38 146
MS.gene038259.t1 MTR_6g014300 24.900 498 302 13 2 471 9 462 3.14e-38 145
MS.gene038259.t1 MTR_1g107375 25.407 492 299 15 5 474 8 453 3.30e-38 145
MS.gene038259.t1 MTR_6g013440 25.294 510 301 17 2 471 8 477 3.38e-38 145
MS.gene038259.t1 MTR_5g464810 26.000 500 302 13 4 471 11 474 3.92e-38 145
MS.gene038259.t1 MTR_5g064240 26.000 500 302 13 4 471 11 474 3.92e-38 145
MS.gene038259.t1 MTR_4g485590 30.963 436 229 17 4 418 8 392 5.05e-38 143
MS.gene038259.t1 MTR_4g008630 36.245 229 131 6 249 474 246 462 5.43e-38 144
MS.gene038259.t1 MTR_8g059425 24.314 510 304 13 2 471 7 474 6.37e-38 145
MS.gene038259.t1 MTR_1g107315 25.709 494 318 15 4 477 7 471 6.86e-38 144
MS.gene038259.t1 MTR_3g084530 25.051 495 314 17 7 474 8 472 6.99e-38 144
MS.gene038259.t1 MTR_3g479610 30.818 318 173 7 178 477 27 315 7.29e-38 141
MS.gene038259.t1 MTR_0036s0220 26.305 498 299 14 6 471 13 474 1.77e-37 143
MS.gene038259.t1 MTR_5g040030 25.000 500 319 12 2 471 11 484 1.79e-37 144
MS.gene038259.t1 MTR_6g035295 25.889 506 302 16 5 472 12 482 1.82e-37 144
MS.gene038259.t1 MTR_1g029540 34.979 243 139 8 238 474 230 459 1.84e-37 143
MS.gene038259.t1 MTR_5g016480 31.786 280 154 8 209 476 218 472 3.55e-37 142
MS.gene038259.t1 MTR_7g070930 25.703 498 312 15 6 472 15 485 4.90e-37 142
MS.gene038259.t1 MTR_6g038230 23.770 488 306 14 4 471 10 451 4.94e-37 142
MS.gene038259.t1 MTR_6g038220 24.532 481 306 16 6 471 12 450 6.24e-37 141
MS.gene038259.t1 MTR_5g072830 24.435 487 305 13 4 474 9 448 2.06e-36 140
MS.gene038259.t1 MTR_0009s0240 27.992 493 289 25 3 471 5 455 2.93e-36 140
MS.gene038259.t1 MTR_1g107365 27.105 487 298 15 5 474 45 491 3.02e-36 140
MS.gene038259.t1 MTR_1g107380 30.097 309 177 8 178 475 193 473 3.11e-36 140
MS.gene038259.t1 MTR_6g014050 24.950 505 307 13 3 471 9 477 3.32e-36 140
MS.gene038259.t1 MTR_6g014310 25.648 386 241 8 109 475 123 481 3.88e-36 140
MS.gene038259.t1 MTR_2g008210 24.405 504 309 12 2 471 8 473 3.94e-36 139
MS.gene038259.t1 MTR_5g072860 25.610 492 304 15 5 476 18 467 5.57e-36 139
MS.gene038259.t1 MTR_6g014020 23.913 506 313 17 2 471 7 476 6.47e-36 139
MS.gene038259.t1 MTR_8g083290 26.157 497 303 16 6 475 5 464 7.31e-36 139
MS.gene038259.t1 MTR_4g128690 26.355 406 253 12 78 476 88 454 1.26e-35 138
MS.gene038259.t1 MTR_3g084540 24.649 499 312 19 7 474 8 473 1.29e-35 138
MS.gene038259.t1 MTR_7g070870 26.453 499 281 16 2 472 16 456 1.41e-35 138
MS.gene038259.t1 MTR_6g038300 23.750 480 315 10 6 472 12 453 1.73e-35 137
MS.gene038259.t1 MTR_3g009490 36.842 190 109 4 286 471 3 185 8.25e-35 129
MS.gene038259.t1 MTR_4g064987 26.598 485 298 16 3 475 6 444 8.36e-35 135
MS.gene038259.t1 MTR_6g014270 23.333 510 319 12 3 475 5 479 9.56e-35 135
MS.gene038259.t1 MTR_7g013200 20.551 472 330 11 7 473 7 438 1.79e-34 134
MS.gene038259.t1 MTR_5g075440 25.000 488 312 14 4 476 9 457 1.91e-34 134
MS.gene038259.t1 MTR_7g013180 22.490 498 306 15 1 473 1 443 2.53e-34 134
MS.gene038259.t1 MTR_2g059240 28.571 399 217 13 103 475 113 469 2.99e-34 134
MS.gene038259.t1 MTR_6g013450 24.078 515 300 16 3 471 8 477 3.02e-34 134
MS.gene038259.t1 MTR_6g014150 25.476 420 258 9 79 471 82 473 3.61e-34 134
MS.gene038259.t1 MTR_6g014187 24.554 505 311 15 2 471 7 476 3.68e-34 134
MS.gene038259.t1 MTR_7g011470 23.695 498 306 16 2 471 7 458 4.25e-34 134
MS.gene038259.t1 MTR_6g014200 26.425 386 230 10 109 471 119 473 4.84e-34 134
MS.gene038259.t1 MTR_5g072840 23.967 484 305 13 4 471 9 445 6.21e-34 133
MS.gene038259.t1 MTR_5g072820 24.641 487 304 13 4 474 9 448 6.86e-34 133
MS.gene038259.t1 MTR_6g013990 26.494 385 229 12 109 471 122 474 9.51e-34 133
MS.gene038259.t1 MTR_4g485640 28.150 373 239 8 111 471 308 663 1.13e-33 134
MS.gene038259.t1 MTR_7g080935 23.960 505 294 16 3 476 9 454 1.38e-33 132
MS.gene038259.t1 MTR_7g011470 23.904 502 304 17 2 471 7 462 1.39e-33 132
MS.gene038259.t1 MTR_3g031450 24.440 491 297 16 4 475 17 452 1.52e-33 132
MS.gene038259.t1 MTR_3g031400 24.262 474 293 13 4 463 17 438 2.86e-33 131
MS.gene038259.t1 MTR_8g071070 28.272 382 225 15 111 474 118 468 3.55e-33 131
MS.gene038259.t1 MTR_7g080940 24.851 503 293 17 3 478 9 453 3.91e-33 131
MS.gene038259.t1 MTR_8g083280 30.882 272 153 7 209 475 221 462 3.98e-33 131
MS.gene038259.t1 MTR_4g064987 26.176 489 303 16 3 476 6 451 6.25e-33 130
MS.gene038259.t1 MTR_7g039550 33.778 225 135 3 250 471 45 258 7.43e-33 126
MS.gene038259.t1 MTR_8g090095 35.714 224 120 8 260 474 271 479 8.38e-33 130
MS.gene038259.t1 MTR_8g032950 26.000 500 305 22 5 472 12 478 1.14e-32 130
MS.gene038259.t1 MTR_6g014170 24.016 508 292 16 2 471 7 458 1.28e-32 129
MS.gene038259.t1 MTR_5g058320 22.954 501 307 15 3 471 8 461 1.49e-32 129
MS.gene038259.t1 MTR_6g013960 22.817 504 321 13 2 471 7 476 2.23e-32 129
MS.gene038259.t1 MTR_6g013900 25.882 425 251 15 85 477 90 482 5.73e-32 128
MS.gene038259.t1 MTR_7g080950 23.868 486 310 15 3 472 4 445 5.86e-32 127
MS.gene038259.t1 MTR_8g043470 26.260 377 208 8 109 471 54 374 7.02e-32 126
MS.gene038259.t1 MTR_7g071050 26.611 481 252 20 6 457 14 422 9.91e-32 126
MS.gene038259.t1 MTR_3g084520 25.575 391 246 13 100 467 97 465 1.03e-31 127
MS.gene038259.t1 MTR_7g013220 20.868 484 337 10 1 473 1 449 1.11e-31 127
MS.gene038259.t1 MTR_6g013920 25.879 398 232 14 109 478 121 483 5.28e-31 125
MS.gene038259.t1 MTR_5g031840 24.366 513 297 13 1 474 1 461 6.16e-31 125
MS.gene038259.t1 MTR_7g470610 30.405 296 163 7 122 407 7 269 1.26e-30 120
MS.gene038259.t1 MTR_7g070583 30.405 296 163 7 122 407 7 269 1.26e-30 120
MS.gene038259.t1 MTR_8g009840 38.579 197 110 4 277 470 333 521 2.29e-30 124
MS.gene038259.t1 MTR_5g031830 25.296 506 295 19 5 474 12 470 3.60e-30 122
MS.gene038259.t1 MTR_6g014190 26.962 293 172 6 195 475 25 287 3.89e-30 119
MS.gene038259.t1 MTR_2086s0010 34.694 196 102 4 284 477 3 174 7.43e-30 115
MS.gene038259.t1 MTR_1996s0010 34.694 196 102 4 284 477 3 174 7.43e-30 115
MS.gene038259.t1 MTR_6g011340 24.156 385 240 9 109 471 122 476 1.16e-29 121
MS.gene038259.t1 MTR_5g031860 28.267 375 211 13 123 474 130 469 1.78e-29 120
MS.gene038259.t1 MTR_8g088560 23.577 492 306 14 5 472 10 455 3.60e-29 119
MS.gene038259.t1 MTR_7g013240 20.551 472 325 12 9 473 10 438 3.61e-29 119
MS.gene038259.t1 MTR_4g128720 23.984 492 313 15 1 476 11 457 3.79e-29 119
MS.gene038259.t1 MTR_5g004940 27.124 306 162 7 171 474 131 377 8.10e-29 117
MS.gene038259.t1 MTR_8g007585 31.628 215 120 4 259 471 199 388 6.99e-28 115
MS.gene038259.t1 MTR_0477s0010 25.691 362 204 8 122 471 5 313 1.08e-27 113
MS.gene038259.t1 MTR_7g013260 21.443 485 310 17 7 473 8 439 1.29e-27 115
MS.gene038259.t1 MTR_5g027210 33.333 219 132 5 259 474 274 481 1.31e-27 115
MS.gene038259.t1 MTR_0078s0200 26.183 317 212 9 2 308 3 307 1.87e-27 112
MS.gene038259.t1 MTR_8g068330 38.071 197 100 7 258 451 264 441 2.04e-27 114
MS.gene038259.t1 MTR_6g014240 25.895 363 219 11 122 471 118 443 5.94e-27 113
MS.gene038259.t1 MTR_5g098960 26.526 475 273 19 1 452 3 424 1.68e-26 112
MS.gene038259.t1 MTR_7g070760 33.019 212 96 4 204 407 28 201 7.95e-26 105
MS.gene038259.t1 MTR_8g006230 27.966 236 156 6 86 315 29 256 4.21e-24 102
MS.gene038259.t1 MTR_8g068360 33.333 219 123 9 237 451 245 444 5.79e-24 104
MS.gene038259.t1 MTR_5g066410 26.651 424 234 17 54 448 40 415 8.84e-24 103
MS.gene038259.t1 MTR_8g007565 27.882 373 216 14 93 448 103 439 1.01e-23 103
MS.gene038259.t1 MTR_4g123553 35.714 196 100 7 259 451 266 438 1.44e-23 103
MS.gene038259.t1 MTR_8g068340 30.233 258 151 11 199 451 212 445 2.02e-23 103
MS.gene038259.t1 MTR_8g007650 27.882 373 216 14 93 448 103 439 2.42e-23 102
MS.gene038259.t1 MTR_7g070995 40.602 133 69 2 347 472 13 142 2.73e-23 96.3
MS.gene038259.t1 MTR_5g072850 31.841 201 96 6 203 394 154 322 3.42e-23 101
MS.gene038259.t1 MTR_2g046620 29.779 272 154 9 194 451 191 439 8.39e-23 101
MS.gene038259.t1 MTR_6g014185 26.573 286 142 9 203 478 121 348 1.21e-22 99.8
MS.gene038259.t1 MTR_2g014900 23.673 490 304 15 5 471 7 449 2.08e-22 100
MS.gene038259.t1 MTR_2g008226 33.503 197 105 6 259 452 275 448 2.38e-22 100
MS.gene038259.t1 MTR_2g008225 35.204 196 101 6 259 451 271 443 6.08e-22 98.6
MS.gene038259.t1 MTR_2g008220 35.204 196 101 6 259 451 270 442 7.19e-22 98.6
MS.gene038259.t1 MTR_5g066390 32.877 146 84 2 328 471 78 211 1.17e-21 93.6
MS.gene038259.t1 MTR_7g067120 23.974 463 277 16 2 451 6 406 1.28e-21 97.4
MS.gene038259.t1 MTR_8g056740 28.383 303 155 13 111 407 55 301 6.15e-21 95.1
MS.gene038259.t1 MTR_0536s0030 33.775 151 91 5 330 472 200 349 9.09e-21 94.0
MS.gene038259.t1 MTR_4g077960 33.673 196 104 7 259 451 243 415 3.45e-20 93.2
MS.gene038259.t1 MTR_6g036650 35.204 196 101 8 259 451 276 448 4.54e-20 93.2
MS.gene038259.t1 MTR_4g079250 29.798 198 118 3 262 458 261 438 4.66e-20 92.8
MS.gene038259.t1 MTR_4g079270 26.493 268 165 7 195 458 199 438 5.30e-20 92.8
MS.gene038259.t1 MTR_6g014000 32.468 154 84 5 326 476 21 157 5.37e-20 92.8
MS.gene038259.t1 MTR_6g042310 32.143 196 107 6 259 451 269 441 1.73e-19 91.3
MS.gene038259.t1 MTR_1g090270 30.045 223 133 8 240 459 244 446 1.91e-19 91.3
MS.gene038259.t1 MTR_3g435310 32.653 196 106 6 259 451 225 397 3.12e-19 90.1
MS.gene038259.t1 MTR_6g014160 28.251 223 101 7 195 407 200 373 1.58e-18 87.8
MS.gene038259.t1 MTR_7g067330 29.442 197 109 6 257 451 238 406 1.93e-18 87.8
MS.gene038259.t1 MTR_4g059370 29.075 227 139 7 235 459 167 373 3.20e-18 86.7
MS.gene038259.t1 MTR_1g107325 32.143 140 87 2 337 474 219 352 7.73e-18 85.5
MS.gene038259.t1 MTR_2g083480 28.509 228 138 7 233 458 234 438 8.28e-17 83.2
MS.gene038259.t1 MTR_6g014186 20.635 504 294 14 2 471 4 435 4.73e-16 80.5
MS.gene038259.t1 MTR_3g009500 28.519 270 166 12 1 253 1 260 2.47e-15 76.6
MS.gene038259.t1 MTR_2g083430 27.149 221 137 5 240 458 240 438 7.90e-15 77.0
MS.gene038259.t1 MTR_5g090680 72.917 48 13 0 1 48 1 48 9.75e-15 70.9
MS.gene038259.t1 MTR_5g090590 61.111 54 21 0 403 456 1 54 1.99e-14 68.2
MS.gene038259.t1 MTR_6g052375 31.667 180 89 7 183 352 39 194 9.83e-14 72.4
MS.gene038259.t1 MTR_3g009520 27.344 256 160 12 6 244 7 253 1.17e-13 71.2
MS.gene038259.t1 MTR_2g009740 36.458 96 44 2 258 353 200 278 5.99e-13 70.1
MS.gene038259.t1 MTR_2g083390 33.333 132 79 3 329 458 290 414 4.84e-12 68.2
MS.gene038259.t1 MTR_6g005660 26.848 257 156 9 3 244 4 243 6.29e-12 66.2
MS.gene038259.t1 MTR_1g090280 29.213 178 108 7 284 459 135 296 1.99e-11 65.5
MS.gene038259.t1 MTR_2g083490 23.109 476 297 19 6 458 9 438 2.45e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038259.t1 AT3G21760 44.286 490 252 11 3 478 2 484 1.33e-132 392
MS.gene038259.t1 AT3G21750 40.994 483 266 8 3 478 2 472 8.69e-126 374
MS.gene038259.t1 AT4G15280 41.701 482 269 8 3 478 2 477 1.23e-124 372
MS.gene038259.t1 AT4G15280 41.701 482 269 8 3 478 34 509 3.17e-124 372
MS.gene038259.t1 AT3G21790 41.020 490 266 10 3 478 2 482 3.35e-123 369
MS.gene038259.t1 AT1G07250 40.741 486 255 11 1 471 2 469 2.07e-120 361
MS.gene038259.t1 AT3G21800 41.752 491 261 11 1 478 1 479 2.01e-118 356
MS.gene038259.t1 AT2G29740 41.358 486 252 15 2 472 5 472 5.15e-118 355
MS.gene038259.t1 AT3G21780 41.116 484 264 12 3 478 2 472 1.81e-116 351
MS.gene038259.t1 AT1G07240 41.164 481 248 10 1 463 1 464 8.13e-115 347
MS.gene038259.t1 AT1G07260 40.041 492 255 16 3 476 4 473 2.59e-111 337
MS.gene038259.t1 AT2G29730 39.588 485 253 13 1 471 1 459 4.37e-107 326
MS.gene038259.t1 AT4G15260 43.989 366 194 6 116 478 1 358 2.85e-104 315
MS.gene038259.t1 AT2G29750 40.041 492 261 16 2 478 5 477 3.17e-104 319
MS.gene038259.t1 AT2G29710 37.782 487 267 12 1 475 1 463 2.82e-100 309
MS.gene038259.t1 AT3G16520 31.828 487 285 14 1 471 1 456 3.25e-70 231
MS.gene038259.t1 AT4G01070 34.029 479 280 17 2 467 5 460 3.11e-69 229
MS.gene038259.t1 AT3G16520 31.579 475 278 14 1 459 1 444 3.54e-67 222
MS.gene038259.t1 AT3G16520 31.579 475 278 14 1 459 1 444 3.85e-67 222
MS.gene038259.t1 AT5G26310 31.743 482 274 18 12 470 14 463 6.56e-64 214
MS.gene038259.t1 AT5G66690 31.172 478 272 18 12 466 14 457 9.44e-63 212
MS.gene038259.t1 AT1G01390 33.680 481 281 18 5 471 8 464 2.27e-62 211
MS.gene038259.t1 AT1G01390 33.680 481 281 18 5 471 25 481 2.42e-62 211
MS.gene038259.t1 AT1G01420 33.608 485 271 16 6 470 12 465 5.66e-61 207
MS.gene038259.t1 AT1G01420 33.608 485 271 16 6 470 9 462 8.12e-61 206
MS.gene038259.t1 AT3G50740 29.800 500 292 21 1 472 3 471 4.58e-59 202
MS.gene038259.t1 AT4G36770 31.613 465 278 15 8 457 7 446 4.64e-55 191
MS.gene038259.t1 AT2G18570 30.081 492 286 18 1 467 1 459 9.92e-55 190
MS.gene038259.t1 AT4G34131 30.178 507 282 14 2 472 7 477 2.20e-51 181
MS.gene038259.t1 AT5G12890 29.644 506 288 22 2 472 7 479 2.51e-50 179
MS.gene038259.t1 AT2G36770 27.000 500 314 15 7 478 16 492 7.67e-50 177
MS.gene038259.t1 AT2G15480 29.317 498 299 14 2 472 7 478 1.24e-48 174
MS.gene038259.t1 AT2G36760 26.253 499 319 14 7 478 16 492 1.40e-48 174
MS.gene038259.t1 AT2G15480 28.937 508 298 14 2 472 7 488 1.46e-48 174
MS.gene038259.t1 AT1G22380 27.525 505 304 13 2 478 10 480 1.78e-48 174
MS.gene038259.t1 AT2G15490 28.862 492 301 13 6 472 8 475 6.03e-48 172
MS.gene038259.t1 AT2G36780 26.347 501 312 13 7 476 16 490 8.11e-48 172
MS.gene038259.t1 AT2G15490 28.484 488 311 13 6 472 8 478 1.37e-47 171
MS.gene038259.t1 AT4G34138 28.827 503 290 18 3 472 9 476 1.47e-46 169
MS.gene038259.t1 AT2G36800 26.824 507 301 15 7 475 14 488 3.30e-46 167
MS.gene038259.t1 AT2G36750 27.921 505 298 16 7 476 12 485 3.77e-46 167
MS.gene038259.t1 AT2G18560 30.905 398 230 15 86 467 1 369 6.82e-46 164
MS.gene038259.t1 AT3G53160 28.684 509 292 17 7 477 10 485 7.29e-45 164
MS.gene038259.t1 AT1G78270 26.796 515 293 21 2 475 10 481 8.61e-45 164
MS.gene038259.t1 AT1G22340 26.316 494 299 11 2 466 10 467 1.17e-44 163
MS.gene038259.t1 AT1G22400 27.235 481 276 15 2 448 10 450 5.24e-44 162
MS.gene038259.t1 AT4G34135 29.067 461 274 14 2 436 8 441 6.61e-44 161
MS.gene038259.t1 AT2G31790 27.273 495 295 14 2 474 5 456 3.19e-43 159
MS.gene038259.t1 AT3G46660 27.105 487 297 17 3 474 12 455 8.51e-43 157
MS.gene038259.t1 AT2G36790 27.237 503 305 15 7 476 15 489 4.11e-42 156
MS.gene038259.t1 AT1G22360 25.494 506 313 15 2 478 7 477 2.27e-41 154
MS.gene038259.t1 AT1G22370 28.241 432 260 12 2 407 10 417 9.65e-41 152
MS.gene038259.t1 AT1G22360 25.996 477 291 12 2 451 7 448 2.86e-40 151
MS.gene038259.t1 AT3G46670 26.531 490 288 18 6 474 10 448 1.03e-39 149
MS.gene038259.t1 AT5G17050 27.361 413 249 10 78 478 87 460 1.25e-39 149
MS.gene038259.t1 AT1G73880 28.797 507 278 21 3 476 12 468 1.36e-39 149
MS.gene038259.t1 AT5G14860 29.563 504 277 25 7 472 10 473 4.17e-39 148
MS.gene038259.t1 AT3G46690 27.273 495 289 20 1 474 5 449 9.66e-39 146
MS.gene038259.t1 AT2G16890 26.305 498 292 17 6 471 10 464 1.08e-38 147
MS.gene038259.t1 AT3G21560 26.096 502 292 18 6 472 13 470 1.09e-38 147
MS.gene038259.t1 AT2G30150 26.305 479 297 13 6 471 14 449 3.04e-38 145
MS.gene038259.t1 AT3G11340 26.243 503 279 19 3 476 7 446 3.15e-38 145
MS.gene038259.t1 AT5G59580 26.667 480 301 15 3 472 7 445 9.45e-38 144
MS.gene038259.t1 AT2G30150 26.050 476 296 13 9 471 1 433 1.44e-37 143
MS.gene038259.t1 AT5G59590 26.446 484 302 16 1 472 6 447 1.46e-37 143
MS.gene038259.t1 AT4G15480 25.707 389 255 10 95 472 111 476 1.04e-36 141
MS.gene038259.t1 AT3G46650 25.105 478 301 13 3 475 8 433 1.05e-36 140
MS.gene038259.t1 AT2G30140 23.760 484 312 11 6 476 14 453 1.07e-36 140
MS.gene038259.t1 AT4G15490 24.547 497 322 13 2 477 5 469 1.43e-36 141
MS.gene038259.t1 AT2G23260 25.918 490 303 16 2 474 7 453 3.52e-36 139
MS.gene038259.t1 AT3G55700 25.813 492 304 15 2 476 5 452 3.59e-36 139
MS.gene038259.t1 AT2G30140 24.224 483 310 12 6 476 14 452 3.81e-36 139
MS.gene038259.t1 AT4G01070 31.006 358 221 13 2 349 5 346 3.27e-35 134
MS.gene038259.t1 AT3G53150 24.809 524 318 17 2 478 19 513 4.16e-35 137
MS.gene038259.t1 AT3G46680 24.335 489 309 15 2 474 6 449 5.31e-35 136
MS.gene038259.t1 AT5G17030 28.492 358 220 8 125 476 130 457 6.52e-35 136
MS.gene038259.t1 AT2G23250 30.110 362 210 13 124 474 106 435 6.63e-35 135
MS.gene038259.t1 AT4G15500 26.238 404 241 13 94 476 97 464 8.45e-35 136
MS.gene038259.t1 AT2G31750 24.409 508 297 16 3 478 6 458 1.08e-34 135
MS.gene038259.t1 AT1G51210 25.751 466 276 15 3 449 18 432 1.24e-34 134
MS.gene038259.t1 AT5G05870 32.215 298 164 10 185 474 187 454 1.28e-34 135
MS.gene038259.t1 AT5G38010 25.720 486 303 15 2 471 7 450 1.48e-34 135
MS.gene038259.t1 AT3G55710 25.355 493 309 14 2 476 5 456 1.88e-34 135
MS.gene038259.t1 AT1G05680 23.868 486 311 14 4 471 5 449 1.94e-34 134
MS.gene038259.t1 AT2G31750 24.603 504 295 16 3 475 6 455 2.42e-34 134
MS.gene038259.t1 AT4G15270 32.510 243 150 6 3 233 2 242 2.48e-34 131
MS.gene038259.t1 AT2G43820 25.506 494 290 16 2 471 4 443 3.18e-34 134
MS.gene038259.t1 AT1G24100 26.482 506 278 22 3 472 9 456 5.30e-34 133
MS.gene038259.t1 AT4G15270 34.597 211 128 5 3 205 2 210 9.92e-34 127
MS.gene038259.t1 AT1G10400 25.832 511 295 19 1 476 3 464 1.95e-33 132
MS.gene038259.t1 AT1G22370 33.735 249 127 7 171 407 25 247 2.95e-33 128
MS.gene038259.t1 AT1G05675 23.663 486 312 14 4 471 5 449 6.15e-33 130
MS.gene038259.t1 AT4G15550 25.800 500 294 18 7 472 15 471 7.32e-33 130
MS.gene038259.t1 AT3G46700 24.187 492 303 16 1 474 5 444 8.65e-33 130
MS.gene038259.t1 AT5G38040 25.316 474 291 18 16 474 21 446 1.71e-32 129
MS.gene038259.t1 AT2G36970 27.599 279 171 7 203 478 224 474 1.91e-32 129
MS.gene038259.t1 AT2G16890 26.353 425 258 14 6 407 10 402 2.19e-32 128
MS.gene038259.t1 AT5G05880 32.727 275 154 10 204 474 201 448 2.79e-32 128
MS.gene038259.t1 AT1G30530 27.612 402 242 13 85 476 90 452 3.84e-32 128
MS.gene038259.t1 AT5G03490 26.844 488 295 19 2 471 16 459 6.49e-32 127
MS.gene038259.t1 AT5G17040 25.737 509 277 17 1 476 1 441 4.67e-30 122
MS.gene038259.t1 AT1G06000 32.323 297 171 9 185 471 154 430 9.67e-30 121
MS.gene038259.t1 AT2G43840 24.949 489 303 13 3 474 5 446 3.39e-29 119
MS.gene038259.t1 AT4G15270 34.518 197 119 5 3 191 2 196 3.87e-29 114
MS.gene038259.t1 AT2G43840 24.544 493 300 13 3 474 5 446 4.53e-29 119
MS.gene038259.t1 AT1G05560 23.663 486 318 16 7 477 7 454 2.44e-28 117
MS.gene038259.t1 AT3G46720 25.155 485 301 19 2 474 6 440 2.48e-28 117
MS.gene038259.t1 AT5G05890 27.368 380 238 12 102 474 104 452 3.58e-28 117
MS.gene038259.t1 AT1G05560 23.663 486 318 16 7 477 57 504 3.75e-28 117
MS.gene038259.t1 AT3G02100 23.960 505 307 17 1 478 9 463 4.29e-28 117
MS.gene038259.t1 AT2G28080 24.551 501 300 15 9 478 22 475 1.10e-27 115
MS.gene038259.t1 AT5G17040 26.781 351 199 11 142 476 31 339 3.91e-27 112
MS.gene038259.t1 AT1G05530 25.000 488 296 18 1 463 1 443 4.73e-27 113
MS.gene038259.t1 AT5G05860 28.417 278 162 8 205 475 201 448 2.00e-26 111
MS.gene038259.t1 AT5G05900 25.673 483 301 19 6 474 9 447 2.16e-25 108
MS.gene038259.t1 AT5G49690 32.061 262 137 13 197 451 205 432 2.26e-25 108
MS.gene038259.t1 AT1G64910 24.116 481 303 17 10 478 11 441 1.06e-24 106
MS.gene038259.t1 AT2G26480 24.230 487 319 17 1 478 4 449 2.28e-24 105
MS.gene038259.t1 AT5G54010 24.486 486 303 17 3 472 4 441 3.96e-24 105
MS.gene038259.t1 AT5G37950 27.368 285 180 9 104 381 78 342 6.93e-24 102
MS.gene038259.t1 AT5G37950 27.208 283 177 7 104 381 78 336 1.01e-23 102
MS.gene038259.t1 AT5G65550 25.745 470 276 21 3 444 7 431 1.27e-23 103
MS.gene038259.t1 AT4G14090 30.435 276 145 10 209 472 213 453 2.10e-23 103
MS.gene038259.t1 AT3G22250 23.173 479 298 14 2 453 5 440 1.20e-22 100
MS.gene038259.t1 AT4G27560 30.213 235 139 6 240 472 230 441 1.55e-21 97.4
MS.gene038259.t1 AT3G29630 27.622 286 181 7 195 478 183 444 1.66e-21 97.4
MS.gene038259.t1 AT1G64920 22.782 496 311 17 2 478 3 445 3.45e-21 96.3
MS.gene038259.t1 AT3G29630 30.275 218 132 4 262 478 220 418 4.72e-21 95.5
MS.gene038259.t1 AT5G53990 23.347 484 299 16 10 476 11 439 6.35e-21 95.5
MS.gene038259.t1 AT5G54060 24.540 489 301 18 6 470 14 458 1.68e-20 94.4
MS.gene038259.t1 AT4G27570 30.357 224 131 6 240 461 230 430 1.92e-20 94.0
MS.gene038259.t1 AT1G50580 29.487 234 142 5 241 472 224 436 9.01e-20 92.0
MS.gene038259.t1 AT2G22590 32.057 209 120 7 245 450 257 446 4.37e-19 90.1
MS.gene038259.t1 AT4G34135 26.205 332 211 10 2 309 8 329 5.63e-18 85.5
MS.gene038259.t1 AT2G22930 27.468 233 146 6 241 472 225 435 1.01e-17 85.9
MS.gene038259.t1 AT4G09500 22.947 475 296 19 3 461 4 424 1.07e-15 79.7
MS.gene038259.t1 AT4G09500 27.979 193 118 4 270 461 227 399 2.49e-15 78.2

Find 152 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGAACTTGGTTCGATGTT+TGG 0.210178 5.4:-71545637 None:intergenic
ACCAACGGTTCCCTTGGTTT+TGG 0.224093 5.4:-71546160 None:intergenic
TGGAACTTGGTTCGATGTTT+GGG 0.231171 5.4:-71545636 None:intergenic
TGATTACTCTCTTACTGAAT+TGG 0.253277 5.4:+71546374 MS.gene038259:CDS
ATACTTGAGAGCATATATTT+TGG 0.259296 5.4:+71546528 MS.gene038259:CDS
TAGATCAGGGTGAGAGAAAA+AGG 0.279182 5.4:-71546088 None:intergenic
TCATGACTAAGACAGTTATT+TGG 0.284500 5.4:-71545519 None:intergenic
TTTGGGCTCAGGGTTTATAA+TGG 0.293607 5.4:-71546142 None:intergenic
ATGGCGACGCCCTTCGGTTT+GGG 0.299519 5.4:-71546339 None:intergenic
TCGCTTGTCTTCTTCACTTC+CGG 0.304211 5.4:+71545811 MS.gene038259:CDS
TTTCGATGAGGATCAGATTA+AGG 0.308450 5.4:+71546260 MS.gene038259:CDS
GGATCTTCTTACAGTCATTT+AGG 0.309123 5.4:+71546798 MS.gene038259:CDS
CATGGCGACGCCCTTCGGTT+TGG 0.316397 5.4:-71546340 None:intergenic
CGAAGGGACTGAAAATTCTT+TGG 0.328180 5.4:-71545791 None:intergenic
TTTGGCAATATCAATCATAT+TGG 0.329593 5.4:-71545773 None:intergenic
CTCTCTTACTGAATTGGGCT+TGG 0.330437 5.4:+71546380 MS.gene038259:CDS
TTCCTTGTTTAGCATGGAAC+TGG 0.335999 5.4:-71545968 None:intergenic
TTGGGCTCAGGGTTTATAAT+GGG 0.340745 5.4:-71546141 None:intergenic
GAGTAGGAAAACTTTGTTAG+AGG 0.347946 5.4:+71546773 MS.gene038259:CDS
GATTACTCTCTTACTGAATT+GGG 0.351013 5.4:+71546375 MS.gene038259:CDS
ACAAGATTGAGAGAGGAATA+AGG 0.357686 5.4:+71546694 MS.gene038259:CDS
TTCTCTCACCCTGATCTAGC+TGG 0.381686 5.4:+71546093 MS.gene038259:CDS
TCAGCAGTTACAAGATAGTT+AGG 0.383017 5.4:-71546672 None:intergenic
TTTCCTCTGCTTTGGGACTA+GGG 0.384153 5.4:+71546233 MS.gene038259:CDS
GCAACCATGGCGACGCCCTT+CGG 0.389566 5.4:-71546345 None:intergenic
GGCTCCGCAGACTCAAATAT+TGG 0.395625 5.4:+71546458 MS.gene038259:CDS
ATCGGTAAACCAGCTAGATC+AGG 0.397776 5.4:-71546102 None:intergenic
GAGACGGCTTGTTTGACGTT+TGG 0.404077 5.4:-71545688 None:intergenic
AATCTACATTGTCTCTTTCA+CGG 0.405411 5.4:-71545873 None:intergenic
ACATCTGATTGTGTTGTGTA+TGG 0.407211 5.4:-71545547 None:intergenic
GCAGGGATTGGAAGGGTCAT+TGG 0.413137 5.4:+71546432 MS.gene038259:CDS
ACTTCCGGTGTTGCTTCCCT+TGG 0.413686 5.4:+71545826 MS.gene038259:CDS
GAAACAAATCCTCCCGTGGC+TGG 0.417526 5.4:-71546486 None:intergenic
GTTGCAGCAGCAGACTGAAT+TGG 0.418663 5.4:+71545903 MS.gene038259:CDS
TACCCGAAGGGTTCTTAGAT+AGG 0.427402 5.4:+71546406 MS.gene038259:CDS
GATTTGTTTCCCATTGTGGC+TGG 0.436533 5.4:+71546499 MS.gene038259:CDS
CGTTTGGTTTCTGTGCTTCG+AGG 0.438592 5.4:-71545672 None:intergenic
TTCGAGGAAAGCCATCATTC+TGG 0.444159 5.4:-71545656 None:intergenic
ATCTGAACCAACGGTTCCCT+TGG 0.446845 5.4:-71546166 None:intergenic
AGATGGCTCGGACCGGGAAA+AGG 0.448137 5.4:-71545445 None:intergenic
TGTCCTATCTAAGAACCCTT+CGG 0.454375 5.4:-71546409 None:intergenic
GTCCTATCTAAGAACCCTTC+GGG 0.456381 5.4:-71546408 None:intergenic
TGTTTAGCATGGAACTGGGC+AGG 0.458526 5.4:-71545963 None:intergenic
GGAATCTAGATGGCTCGGAC+CGG 0.463519 5.4:-71545452 None:intergenic
AAGAGCGGCCACGTGGCAAT+GGG 0.468807 5.4:-71546555 None:intergenic
TTCCCATTCCTTGTTTAGCA+TGG 0.475048 5.4:-71545974 None:intergenic
AAAGAGCGGCCACGTGGCAA+TGG 0.477140 5.4:-71546556 None:intergenic
CTCAGGGTTTATAATGGGTC+CGG 0.481886 5.4:-71546136 None:intergenic
TTAGATAGGACAGCAGGGAT+TGG 0.483362 5.4:+71546420 MS.gene038259:CDS
AAAGCCATCATTCTGGAACT+TGG 0.484584 5.4:-71545649 None:intergenic
TACGAAGAGACCATATGAAA+TGG 0.485625 5.4:-71546314 None:intergenic
GGAGATTGCACGTGCTATTG+AGG 0.488024 5.4:+71546281 MS.gene038259:CDS
TTCCATGCTAAACAAGGAAT+GGG 0.488054 5.4:+71545972 MS.gene038259:CDS
ACTCAAGGGTGGAATCTAGA+TGG 0.488352 5.4:-71545462 None:intergenic
TTGGAGGCGGTTATCACGGT+TGG 0.490973 5.4:-71545500 None:intergenic
AATAAGGAATGTGTTGGAAA+AGG 0.493111 5.4:+71546710 MS.gene038259:CDS
AAATCCTCCCGTGGCTGGGT+GGG 0.497209 5.4:-71546481 None:intergenic
GGTCCGGCAGGATAAATAAT+CGG 0.497425 5.4:-71546120 None:intergenic
GGAGGATTTGTTTCCCATTG+TGG 0.498356 5.4:+71546495 MS.gene038259:CDS
ATAGTGGTGTCCATTTCATA+TGG 0.500113 5.4:+71546304 MS.gene038259:CDS
GGGTTCTTAGATAGGACAGC+AGG 0.501106 5.4:+71546414 MS.gene038259:CDS
GTTGATGATGTCGAGAGAAT+CGG 0.501159 5.4:-71545593 None:intergenic
TATTGAATTCCAGCCACAAT+GGG 0.504269 5.4:-71546508 None:intergenic
AAACAAATCCTCCCGTGGCT+GGG 0.507384 5.4:-71546485 None:intergenic
GGTGGCCTCAAGAAAGCAAA+TGG 0.510456 5.4:+71546018 MS.gene038259:CDS
CGAACCAAGTTCCAGAATGA+TGG 0.511255 5.4:+71545645 MS.gene038259:CDS
TTAGAAGCTTTGCAAACTCA+AGG 0.514455 5.4:-71545477 None:intergenic
CAAATCCTCCCGTGGCTGGG+TGG 0.515319 5.4:-71546482 None:intergenic
CGAGAGAATCGGAGGTGGGA+AGG 0.520434 5.4:-71545582 None:intergenic
AGTAGGAAAACTTTGTTAGA+GGG 0.520802 5.4:+71546774 MS.gene038259:CDS
GATGGCTCGGACCGGGAAAA+GGG 0.522044 5.4:-71545444 None:intergenic
GAATCTAGATGGCTCGGACC+GGG 0.524207 5.4:-71545451 None:intergenic
ATAGGACAGCAGGGATTGGA+AGG 0.524911 5.4:+71546424 MS.gene038259:CDS
AGGAATGTGTTGGAAAAGGA+TGG 0.524997 5.4:+71546714 MS.gene038259:CDS
TGACTAAGACAGTTATTTGG+AGG 0.526608 5.4:-71545516 None:intergenic
GGAACTTGGTTCGATGTTTG+GGG 0.529090 5.4:-71545635 None:intergenic
TTCCTCTGCTTTGGGACTAG+GGG 0.532477 5.4:+71546234 MS.gene038259:CDS
GGATTGGAAGGGTCATTGGA+TGG 0.533790 5.4:+71546436 MS.gene038259:CDS
GTTCCATGCTAAACAAGGAA+TGG 0.538019 5.4:+71545971 MS.gene038259:CDS
AAGAGATGAGTGAAAAGAGT+AGG 0.538493 5.4:+71546757 MS.gene038259:CDS
TTACCGATTATTTATCCTGC+CGG 0.540162 5.4:+71546117 MS.gene038259:CDS
CGAGTTGGCGAAAGTTGGTA+TGG 0.541673 5.4:-71545926 None:intergenic
GAGAGAATCGGAGGTGGGAA+GGG 0.543583 5.4:-71545581 None:intergenic
CCCAAAACCAAGGGAACCGT+TGG 0.544135 5.4:+71546159 MS.gene038259:CDS
GCACGTGCTATTGAGGATAG+TGG 0.544608 5.4:+71546288 MS.gene038259:CDS
GAACTGGGCAGGGAGTATAT+AGG 0.550771 5.4:-71545952 None:intergenic
GATTGGAAGGGTCATTGGAT+GGG 0.552682 5.4:+71546437 MS.gene038259:CDS
GAGAGGAATAAGGAATGTGT+TGG 0.553376 5.4:+71546704 MS.gene038259:CDS
AAGGGAACCGTTGGTTCAGA+TGG 0.553594 5.4:+71546168 MS.gene038259:CDS
TAATGCCATTTGCTTTCTTG+AGG 0.554233 5.4:-71546023 None:intergenic
TTATTTGGAGGCGGTTATCA+CGG 0.554498 5.4:-71545504 None:intergenic
TGAACCAAGGGAAGCAACAC+CGG 0.556380 5.4:-71545830 None:intergenic
CATACCAACTTTCGCCAACT+CGG 0.556718 5.4:+71545927 MS.gene038259:CDS
GTTTAGCATGGAACTGGGCA+GGG 0.557705 5.4:-71545962 None:intergenic
CATCTGATTGTGTTGTGTAT+GGG 0.563936 5.4:-71545546 None:intergenic
TCCTTGTTTAGCATGGAACT+GGG 0.565196 5.4:-71545967 None:intergenic
AATATTGGCCCACCCAGCCA+CGG 0.566881 5.4:+71546473 MS.gene038259:CDS
CTAAGACAGTTATTTGGAGG+CGG 0.568577 5.4:-71545513 None:intergenic
AGGAAAACTTTGTTAGAGGG+TGG 0.571832 5.4:+71546777 MS.gene038259:CDS
GGAACCGAGTTGGCGAAAGT+TGG 0.574609 5.4:-71545931 None:intergenic
GTCAACAACAAAGGCAGCGA+GGG 0.576148 5.4:-71545740 None:intergenic
GGAGTATATAGGAACCGAGT+TGG 0.578646 5.4:-71545941 None:intergenic
ATATTGGCCCACCCAGCCAC+GGG 0.579171 5.4:+71546474 MS.gene038259:CDS
GGGTTTATAATGGGTCCGGC+AGG 0.580616 5.4:-71546132 None:intergenic
GATTGTGTTAGATTATAGAG+TGG 0.583178 5.4:+71546635 MS.gene038259:CDS
AATATGAAGATTTGAACCAA+GGG 0.583266 5.4:-71545842 None:intergenic
GAAGTGAAGAAGACAAGCGA+AGG 0.583298 5.4:-71545808 None:intergenic
AACCCTGAGCCCAAAACCAA+GGG 0.584453 5.4:+71546150 MS.gene038259:CDS
AGGGTGGAATCTAGATGGCT+CGG 0.585486 5.4:-71545457 None:intergenic
GATGTCGAGAGAATCGGAGG+TGG 0.588633 5.4:-71545587 None:intergenic
TAGAAGCTTTGCAAACTCAA+GGG 0.590954 5.4:-71545476 None:intergenic
ATTGGTGTGTGAGCTGAAGA+TGG 0.591081 5.4:+71546605 MS.gene038259:CDS
TGTGTTGGAAAAGGATGGAG+AGG 0.593136 5.4:+71546719 MS.gene038259:CDS
GCCCAGTTCCATGCTAAACA+AGG 0.593517 5.4:+71545966 MS.gene038259:CDS
CAAACCGAAGGGCGTCGCCA+TGG 0.595031 5.4:+71546341 MS.gene038259:CDS
TCTAGTAGTGAGATTAGAGA+CGG 0.595637 5.4:-71545704 None:intergenic
TCTTCGTAAACCCAAACCGA+AGG 0.597629 5.4:+71546329 MS.gene038259:CDS
GTAATCAGAGGGTGCAACCA+TGG 0.599824 5.4:-71546358 None:intergenic
GTGTGAGCTGAAGATGGCTG+TGG 0.601171 5.4:+71546611 MS.gene038259:CDS
AGGAAAACTACAGAGGAAAG+AGG 0.609069 5.4:-71546216 None:intergenic
TCGGTAAACCAGCTAGATCA+GGG 0.610098 5.4:-71546101 None:intergenic
GTTCAGATGGTATCATCAAG+TGG 0.611139 5.4:+71546181 MS.gene038259:CDS
CTCACTACTAGAGAACAACA+TGG 0.614257 5.4:+71545715 MS.gene038259:CDS
TACCCCTAGTCCCAAAGCAG+AGG 0.616832 5.4:-71546236 None:intergenic
GATTATAGAGTGGAGTACAA+TGG 0.618298 5.4:+71546645 MS.gene038259:CDS
AAGCTTTGCAAACTCAAGGG+TGG 0.619499 5.4:-71545473 None:intergenic
ATGTCGAGAGAATCGGAGGT+GGG 0.620825 5.4:-71545586 None:intergenic
TTCAGTAAGAGAGTAATCAG+AGG 0.620922 5.4:-71546370 None:intergenic
AAACCCTGAGCCCAAAACCA+AGG 0.621240 5.4:+71546149 MS.gene038259:CDS
TGGGCCAATATTTGAGTCTG+CGG 0.621392 5.4:-71546462 None:intergenic
GAATATGAAGATTTGAACCA+AGG 0.623644 5.4:-71545843 None:intergenic
GTCTGTTGTTCAGCAAAGAG+CGG 0.624299 5.4:-71546570 None:intergenic
GGGGAAGAGAAACTTCTGGA+AGG 0.625930 5.4:-71545615 None:intergenic
GATGATACCATCTGAACCAA+CGG 0.626991 5.4:-71546175 None:intergenic
GAACTTGGTTCGATGTTTGG+GGG 0.629732 5.4:-71545634 None:intergenic
TCAGTAAGAGAGTAATCAGA+GGG 0.633852 5.4:-71546369 None:intergenic
TTGGCCCACCCAGCCACGGG+AGG 0.636752 5.4:+71546477 MS.gene038259:CDS
CTTCGTAAACCCAAACCGAA+GGG 0.641032 5.4:+71546330 MS.gene038259:CDS
ACTGCTGACAAGATTGAGAG+AGG 0.645137 5.4:+71546687 MS.gene038259:CDS
GATGATGTCGAGAGAATCGG+AGG 0.647208 5.4:-71545590 None:intergenic
GTATTGAATTCCAGCCACAA+TGG 0.647499 5.4:-71546509 None:intergenic
GACTAGGGGTACTTTCGATG+AGG 0.655196 5.4:+71546248 MS.gene038259:CDS
TAGGACAGCAGGGATTGGAA+GGG 0.657102 5.4:+71546425 MS.gene038259:CDS
GGTTCTTAGATAGGACAGCA+GGG 0.660300 5.4:+71546415 MS.gene038259:CDS
GCAGAACATGTCAACAACAA+AGG 0.660721 5.4:-71545749 None:intergenic
AAGTGAAGAAGACAAGCGAA+GGG 0.661051 5.4:-71545807 None:intergenic
ATGGGAAACAAATCCTCCCG+TGG 0.667802 5.4:-71546490 None:intergenic
TTCAGCAAAGAGCGGCCACG+TGG 0.670684 5.4:-71546562 None:intergenic
TGTCAACAACAAAGGCAGCG+AGG 0.687793 5.4:-71545741 None:intergenic
AAAGCAGAGGAAAACTACAG+AGG 0.716171 5.4:-71546223 None:intergenic
TTGGTGTGCCCATTGCCACG+TGG 0.732476 5.4:+71546547 MS.gene038259:CDS
TGAAGAGCTAGAATCCCATG+CGG 0.773972 5.4:+71546059 MS.gene038259:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AATATGAAGATTTGAACCAA+GGG - chr5.4:71545845-71545864 None:intergenic 25.0%
! TTTGGCAATATCAATCATAT+TGG - chr5.4:71545776-71545795 None:intergenic 25.0%
!!! ATACTTGAGAGCATATATTT+TGG + chr5.4:71546528-71546547 MS.gene038259:CDS 25.0%
AATAAGGAATGTGTTGGAAA+AGG + chr5.4:71546710-71546729 MS.gene038259:CDS 30.0%
AATCTACATTGTCTCTTTCA+CGG - chr5.4:71545876-71545895 None:intergenic 30.0%
ACCAGCATAGTTCATAAAAA+AGG - chr5.4:71546001-71546020 None:intergenic 30.0%
AGTAGGAAAACTTTGTTAGA+GGG + chr5.4:71546774-71546793 MS.gene038259:CDS 30.0%
GAATATGAAGATTTGAACCA+AGG - chr5.4:71545846-71545865 None:intergenic 30.0%
GATTACTCTCTTACTGAATT+GGG + chr5.4:71546375-71546394 MS.gene038259:CDS 30.0%
GATTGTGTTAGATTATAGAG+TGG + chr5.4:71546635-71546654 MS.gene038259:CDS 30.0%
TCATGACTAAGACAGTTATT+TGG - chr5.4:71545522-71545541 None:intergenic 30.0%
TGATTACTCTCTTACTGAAT+TGG + chr5.4:71546374-71546393 MS.gene038259:CDS 30.0%
! ACAGACTAATGCTTTTCAAT+TGG + chr5.4:71546587-71546606 MS.gene038259:CDS 30.0%
!!! TCCTTTTTTATGAACTATGC+TGG + chr5.4:71545997-71546016 MS.gene038259:CDS 30.0%
!!! TTTTTTATGAACTATGCTGG+TGG + chr5.4:71546000-71546019 MS.gene038259:CDS 30.0%
AAGAGATGAGTGAAAAGAGT+AGG + chr5.4:71546757-71546776 MS.gene038259:CDS 35.0%
ACAAGATTGAGAGAGGAATA+AGG + chr5.4:71546694-71546713 MS.gene038259:CDS 35.0%
ACATCTGATTGTGTTGTGTA+TGG - chr5.4:71545550-71545569 None:intergenic 35.0%
ATAGTGGTGTCCATTTCATA+TGG + chr5.4:71546304-71546323 MS.gene038259:CDS 35.0%
CATCTGATTGTGTTGTGTAT+GGG - chr5.4:71545549-71545568 None:intergenic 35.0%
GAGTAGGAAAACTTTGTTAG+AGG + chr5.4:71546773-71546792 MS.gene038259:CDS 35.0%
GATTATAGAGTGGAGTACAA+TGG + chr5.4:71546645-71546664 MS.gene038259:CDS 35.0%
GGATCTTCTTACAGTCATTT+AGG + chr5.4:71546798-71546817 MS.gene038259:CDS 35.0%
TACGAAGAGACCATATGAAA+TGG - chr5.4:71546317-71546336 None:intergenic 35.0%
TAGAAGCTTTGCAAACTCAA+GGG - chr5.4:71545479-71545498 None:intergenic 35.0%
TATTGAATTCCAGCCACAAT+GGG - chr5.4:71546511-71546530 None:intergenic 35.0%
TCAGCAGTTACAAGATAGTT+AGG - chr5.4:71546675-71546694 None:intergenic 35.0%
TCAGTAAGAGAGTAATCAGA+GGG - chr5.4:71546372-71546391 None:intergenic 35.0%
TCTAGTAGTGAGATTAGAGA+CGG - chr5.4:71545707-71545726 None:intergenic 35.0%
TGACTAAGACAGTTATTTGG+AGG - chr5.4:71545519-71545538 None:intergenic 35.0%
TTAGAAGCTTTGCAAACTCA+AGG - chr5.4:71545480-71545499 None:intergenic 35.0%
TTCAGTAAGAGAGTAATCAG+AGG - chr5.4:71546373-71546392 None:intergenic 35.0%
TTCCATGCTAAACAAGGAAT+GGG + chr5.4:71545972-71545991 MS.gene038259:CDS 35.0%
TTTCGATGAGGATCAGATTA+AGG + chr5.4:71546260-71546279 MS.gene038259:CDS 35.0%
! TAATGCCATTTGCTTTCTTG+AGG - chr5.4:71546026-71546045 None:intergenic 35.0%
! TTACCGATTATTTATCCTGC+CGG + chr5.4:71546117-71546136 MS.gene038259:CDS 35.0%
AAAGCAGAGGAAAACTACAG+AGG - chr5.4:71546226-71546245 None:intergenic 40.0%
AAGTGAAGAAGACAAGCGAA+GGG - chr5.4:71545810-71545829 None:intergenic 40.0%
AGAAAAAGGATTGAACCGCA+TGG - chr5.4:71546077-71546096 None:intergenic 40.0%
AGGAAAACTACAGAGGAAAG+AGG - chr5.4:71546219-71546238 None:intergenic 40.0%
AGGAAAACTTTGTTAGAGGG+TGG + chr5.4:71546777-71546796 MS.gene038259:CDS 40.0%
AGGAATGTGTTGGAAAAGGA+TGG + chr5.4:71546714-71546733 MS.gene038259:CDS 40.0%
CGAAGGGACTGAAAATTCTT+TGG - chr5.4:71545794-71545813 None:intergenic 40.0%
CTAAGACAGTTATTTGGAGG+CGG - chr5.4:71545516-71545535 None:intergenic 40.0%
CTCACTACTAGAGAACAACA+TGG + chr5.4:71545715-71545734 MS.gene038259:CDS 40.0%
GAAAAAGGATTGAACCGCAT+GGG - chr5.4:71546076-71546095 None:intergenic 40.0%
GAGAGGAATAAGGAATGTGT+TGG + chr5.4:71546704-71546723 MS.gene038259:CDS 40.0%
GATGATACCATCTGAACCAA+CGG - chr5.4:71546178-71546197 None:intergenic 40.0%
GCAGAACATGTCAACAACAA+AGG - chr5.4:71545752-71545771 None:intergenic 40.0%
GTATTGAATTCCAGCCACAA+TGG - chr5.4:71546512-71546531 None:intergenic 40.0%
GTTCAGATGGTATCATCAAG+TGG + chr5.4:71546181-71546200 MS.gene038259:CDS 40.0%
GTTCCATGCTAAACAAGGAA+TGG + chr5.4:71545971-71545990 MS.gene038259:CDS 40.0%
TAGATCAGGGTGAGAGAAAA+AGG - chr5.4:71546091-71546110 None:intergenic 40.0%
TGTCCTATCTAAGAACCCTT+CGG - chr5.4:71546412-71546431 None:intergenic 40.0%
TTATTTGGAGGCGGTTATCA+CGG - chr5.4:71545507-71545526 None:intergenic 40.0%
TTGGGCTCAGGGTTTATAAT+GGG - chr5.4:71546144-71546163 None:intergenic 40.0%
TTTGGGCTCAGGGTTTATAA+TGG - chr5.4:71546145-71546164 None:intergenic 40.0%
! CTGTAGTTTTCCTCTGCTTT+GGG + chr5.4:71546226-71546245 MS.gene038259:CDS 40.0%
! TCCTTGTTTAGCATGGAACT+GGG - chr5.4:71545970-71545989 None:intergenic 40.0%
! TCTGTAGTTTTCCTCTGCTT+TGG + chr5.4:71546225-71546244 MS.gene038259:CDS 40.0%
! TGGAACTTGGTTCGATGTTT+GGG - chr5.4:71545639-71545658 None:intergenic 40.0%
! TTCCCATTCCTTGTTTAGCA+TGG - chr5.4:71545977-71545996 None:intergenic 40.0%
! TTCCTTGTTTAGCATGGAAC+TGG - chr5.4:71545971-71545990 None:intergenic 40.0%
!! AAAGCCATCATTCTGGAACT+TGG - chr5.4:71545652-71545671 None:intergenic 40.0%
!! GTTGATGATGTCGAGAGAAT+CGG - chr5.4:71545596-71545615 None:intergenic 40.0%
AAGCTTTGCAAACTCAAGGG+TGG - chr5.4:71545476-71545495 None:intergenic 45.0%
ACTCAAGGGTGGAATCTAGA+TGG - chr5.4:71545465-71545484 None:intergenic 45.0%
ACTGCTGACAAGATTGAGAG+AGG + chr5.4:71546687-71546706 MS.gene038259:CDS 45.0%
ATCGGTAAACCAGCTAGATC+AGG - chr5.4:71546105-71546124 None:intergenic 45.0%
ATTGGTGTGTGAGCTGAAGA+TGG + chr5.4:71546605-71546624 MS.gene038259:CDS 45.0%
CATACCAACTTTCGCCAACT+CGG + chr5.4:71545927-71545946 MS.gene038259:CDS 45.0%
CGAACCAAGTTCCAGAATGA+TGG + chr5.4:71545645-71545664 MS.gene038259:CDS 45.0%
CTCTCTTACTGAATTGGGCT+TGG + chr5.4:71546380-71546399 MS.gene038259:CDS 45.0%
CTTCGTAAACCCAAACCGAA+GGG + chr5.4:71546330-71546349 MS.gene038259:CDS 45.0%
GAAGTGAAGAAGACAAGCGA+AGG - chr5.4:71545811-71545830 None:intergenic 45.0%
GATTGGAAGGGTCATTGGAT+GGG + chr5.4:71546437-71546456 MS.gene038259:CDS 45.0%
GGAGTATATAGGAACCGAGT+TGG - chr5.4:71545944-71545963 None:intergenic 45.0%
GGTCCGGCAGGATAAATAAT+CGG - chr5.4:71546123-71546142 None:intergenic 45.0%
GGTTCTTAGATAGGACAGCA+GGG + chr5.4:71546415-71546434 MS.gene038259:CDS 45.0%
GTCCTATCTAAGAACCCTTC+GGG - chr5.4:71546411-71546430 None:intergenic 45.0%
GTCTGTTGTTCAGCAAAGAG+CGG - chr5.4:71546573-71546592 None:intergenic 45.0%
TACCCGAAGGGTTCTTAGAT+AGG + chr5.4:71546406-71546425 MS.gene038259:CDS 45.0%
TCGCTTGTCTTCTTCACTTC+CGG + chr5.4:71545811-71545830 MS.gene038259:CDS 45.0%
TCGGTAAACCAGCTAGATCA+GGG - chr5.4:71546104-71546123 None:intergenic 45.0%
TCTTCGTAAACCCAAACCGA+AGG + chr5.4:71546329-71546348 MS.gene038259:CDS 45.0%
TGAAGAGCTAGAATCCCATG+CGG + chr5.4:71546059-71546078 MS.gene038259:CDS 45.0%
TGGGCCAATATTTGAGTCTG+CGG - chr5.4:71546465-71546484 None:intergenic 45.0%
TGTGTTGGAAAAGGATGGAG+AGG + chr5.4:71546719-71546738 MS.gene038259:CDS 45.0%
TTAGATAGGACAGCAGGGAT+TGG + chr5.4:71546420-71546439 MS.gene038259:CDS 45.0%
TTCGAGGAAAGCCATCATTC+TGG - chr5.4:71545659-71545678 None:intergenic 45.0%
TTTGGGGGAAGAGAAACTTC+TGG - chr5.4:71545622-71545641 None:intergenic 45.0%
! CTGGAACTTGGTTCGATGTT+TGG - chr5.4:71545640-71545659 None:intergenic 45.0%
! GAACTTGGTTCGATGTTTGG+GGG - chr5.4:71545637-71545656 None:intergenic 45.0%
! GATTTGTTTCCCATTGTGGC+TGG + chr5.4:71546499-71546518 MS.gene038259:CDS 45.0%
! GGAACTTGGTTCGATGTTTG+GGG - chr5.4:71545638-71545657 None:intergenic 45.0%
! GGAGGATTTGTTTCCCATTG+TGG + chr5.4:71546495-71546514 MS.gene038259:CDS 45.0%
! GTTGTGTTTGTCCCTTTTCC+CGG + chr5.4:71545433-71545452 MS.gene038259:CDS 45.0%
!! CTCAGGGTTTATAATGGGTC+CGG - chr5.4:71546139-71546158 None:intergenic 45.0%
!! TTTCCTCTGCTTTGGGACTA+GGG + chr5.4:71546233-71546252 MS.gene038259:CDS 45.0%
!!! TTTTCCTCTGCTTTGGGACT+AGG + chr5.4:71546232-71546251 MS.gene038259:CDS 45.0%
AAACAAATCCTCCCGTGGCT+GGG - chr5.4:71546488-71546507 None:intergenic 50.0%
AAACCCTGAGCCCAAAACCA+AGG + chr5.4:71546149-71546168 MS.gene038259:CDS 50.0%
AACCCTGAGCCCAAAACCAA+GGG + chr5.4:71546150-71546169 MS.gene038259:CDS 50.0%
AGGGTGGAATCTAGATGGCT+CGG - chr5.4:71545460-71545479 None:intergenic 50.0%
ATAGGACAGCAGGGATTGGA+AGG + chr5.4:71546424-71546443 MS.gene038259:CDS 50.0%
ATCTGAACCAACGGTTCCCT+TGG - chr5.4:71546169-71546188 None:intergenic 50.0%
ATGGGAAACAAATCCTCCCG+TGG - chr5.4:71546493-71546512 None:intergenic 50.0%
ATGTCGAGAGAATCGGAGGT+GGG - chr5.4:71545589-71545608 None:intergenic 50.0%
GATGATGTCGAGAGAATCGG+AGG - chr5.4:71545593-71545612 None:intergenic 50.0%
GCCCAGTTCCATGCTAAACA+AGG + chr5.4:71545966-71545985 MS.gene038259:CDS 50.0%
GGATTGGAAGGGTCATTGGA+TGG + chr5.4:71546436-71546455 MS.gene038259:CDS 50.0%
GGCTCCGCAGACTCAAATAT+TGG + chr5.4:71546458-71546477 MS.gene038259:CDS 50.0%
GGGGAAGAGAAACTTCTGGA+AGG - chr5.4:71545618-71545637 None:intergenic 50.0%
GGGTTCTTAGATAGGACAGC+AGG + chr5.4:71546414-71546433 MS.gene038259:CDS 50.0%
GGTGGCCTCAAGAAAGCAAA+TGG + chr5.4:71546018-71546037 MS.gene038259:CDS 50.0%
GTCAACAACAAAGGCAGCGA+GGG - chr5.4:71545743-71545762 None:intergenic 50.0%
GTTGCAGCAGCAGACTGAAT+TGG + chr5.4:71545903-71545922 MS.gene038259:CDS 50.0%
GTTTAGCATGGAACTGGGCA+GGG - chr5.4:71545965-71545984 None:intergenic 50.0%
TAGGACAGCAGGGATTGGAA+GGG + chr5.4:71546425-71546444 MS.gene038259:CDS 50.0%
TGAACCAAGGGAAGCAACAC+CGG - chr5.4:71545833-71545852 None:intergenic 50.0%
TGTCAACAACAAAGGCAGCG+AGG - chr5.4:71545744-71545763 None:intergenic 50.0%
TGTTTAGCATGGAACTGGGC+AGG - chr5.4:71545966-71545985 None:intergenic 50.0%
TTCTCTCACCCTGATCTAGC+TGG + chr5.4:71546093-71546112 MS.gene038259:CDS 50.0%
! ACCAACGGTTCCCTTGGTTT+TGG - chr5.4:71546163-71546182 None:intergenic 50.0%
! CGTTTGGTTTCTGTGCTTCG+AGG - chr5.4:71545675-71545694 None:intergenic 50.0%
! GAACTGGGCAGGGAGTATAT+AGG - chr5.4:71545955-71545974 None:intergenic 50.0%
! GAGACGGCTTGTTTGACGTT+TGG - chr5.4:71545691-71545710 None:intergenic 50.0%
! GCACGTGCTATTGAGGATAG+TGG + chr5.4:71546288-71546307 MS.gene038259:CDS 50.0%
! GGAGATTGCACGTGCTATTG+AGG + chr5.4:71546281-71546300 MS.gene038259:CDS 50.0%
! GTAATCAGAGGGTGCAACCA+TGG - chr5.4:71546361-71546380 None:intergenic 50.0%
!! AAGGGAACCGTTGGTTCAGA+TGG + chr5.4:71546168-71546187 MS.gene038259:CDS 50.0%
!! CCAACGGTTCCCTTGGTTTT+GGG - chr5.4:71546162-71546181 None:intergenic 50.0%
!! CGAGTTGGCGAAAGTTGGTA+TGG - chr5.4:71545929-71545948 None:intergenic 50.0%
!! GACTAGGGGTACTTTCGATG+AGG + chr5.4:71546248-71546267 MS.gene038259:CDS 50.0%
!! TTCCTCTGCTTTGGGACTAG+GGG + chr5.4:71546234-71546253 MS.gene038259:CDS 50.0%
!!! TGGGCTTGGTTTTACCCGAA+GGG + chr5.4:71546394-71546413 MS.gene038259:CDS 50.0%
!!! TTCCCTTGGTTTTGGGCTCA+GGG - chr5.4:71546155-71546174 None:intergenic 50.0%
!!! TTGGGCTTGGTTTTACCCGA+AGG + chr5.4:71546393-71546412 MS.gene038259:CDS 50.0%
AATATTGGCCCACCCAGCCA+CGG + chr5.4:71546473-71546492 MS.gene038259:CDS 55.0%
CCCAAAACCAAGGGAACCGT+TGG + chr5.4:71546159-71546178 MS.gene038259:CDS 55.0%
GAAACAAATCCTCCCGTGGC+TGG - chr5.4:71546489-71546508 None:intergenic 55.0%
GAGAGAATCGGAGGTGGGAA+GGG - chr5.4:71545584-71545603 None:intergenic 55.0%
GATGTCGAGAGAATCGGAGG+TGG - chr5.4:71545590-71545609 None:intergenic 55.0%
GCAGGGATTGGAAGGGTCAT+TGG + chr5.4:71546432-71546451 MS.gene038259:CDS 55.0%
GTGTGAGCTGAAGATGGCTG+TGG + chr5.4:71546611-71546630 MS.gene038259:CDS 55.0%
TACCCCTAGTCCCAAAGCAG+AGG - chr5.4:71546239-71546258 None:intergenic 55.0%
TTGGAGGCGGTTATCACGGT+TGG - chr5.4:71545503-71545522 None:intergenic 55.0%
! GAATCTAGATGGCTCGGACC+GGG - chr5.4:71545454-71545473 None:intergenic 55.0%
! GGAACCGAGTTGGCGAAAGT+TGG - chr5.4:71545934-71545953 None:intergenic 55.0%
! GGAATCTAGATGGCTCGGAC+CGG - chr5.4:71545455-71545474 None:intergenic 55.0%
!! ACTTCCGGTGTTGCTTCCCT+TGG + chr5.4:71545826-71545845 MS.gene038259:CDS 55.0%
!! GGGTTTATAATGGGTCCGGC+AGG - chr5.4:71546135-71546154 None:intergenic 55.0%
!!! GTTCCCTTGGTTTTGGGCTC+AGG - chr5.4:71546156-71546175 None:intergenic 55.0%
AAAGAGCGGCCACGTGGCAA+TGG - chr5.4:71546559-71546578 None:intergenic 60.0%
AAATCCTCCCGTGGCTGGGT+GGG - chr5.4:71546484-71546503 None:intergenic 60.0%
AAGAGCGGCCACGTGGCAAT+GGG - chr5.4:71546558-71546577 None:intergenic 60.0%
ATATTGGCCCACCCAGCCAC+GGG + chr5.4:71546474-71546493 MS.gene038259:CDS 60.0%
ATGGCGACGCCCTTCGGTTT+GGG - chr5.4:71546342-71546361 None:intergenic 60.0%
CGAGAGAATCGGAGGTGGGA+AGG - chr5.4:71545585-71545604 None:intergenic 60.0%
TTCAGCAAAGAGCGGCCACG+TGG - chr5.4:71546565-71546584 None:intergenic 60.0%
TTGGTGTGCCCATTGCCACG+TGG + chr5.4:71546547-71546566 MS.gene038259:CDS 60.0%
! AGATGGCTCGGACCGGGAAA+AGG - chr5.4:71545448-71545467 None:intergenic 60.0%
! GATGGCTCGGACCGGGAAAA+GGG - chr5.4:71545447-71545466 None:intergenic 60.0%
CAAATCCTCCCGTGGCTGGG+TGG - chr5.4:71546485-71546504 None:intergenic 65.0%
CATGGCGACGCCCTTCGGTT+TGG - chr5.4:71546343-71546362 None:intergenic 65.0%
GCAACCATGGCGACGCCCTT+CGG - chr5.4:71546348-71546367 None:intergenic 65.0%
!! CAAACCGAAGGGCGTCGCCA+TGG + chr5.4:71546341-71546360 MS.gene038259:CDS 65.0%
TTGGCCCACCCAGCCACGGG+AGG + chr5.4:71546477-71546496 MS.gene038259:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 71545418 71546854 71545418 ID=MS.gene038259
chr5.4 mRNA 71545418 71546854 71545418 ID=MS.gene038259.t1;Parent=MS.gene038259
chr5.4 exon 71545418 71546854 71545418 ID=MS.gene038259.t1.exon1;Parent=MS.gene038259.t1
chr5.4 CDS 71545418 71546854 71545418 ID=cds.MS.gene038259.t1;Parent=MS.gene038259.t1
Gene Sequence

>MS.gene038259

ATGAAGAAAGCAGAAGTTGTGTTTGTCCCTTTTCCCGGTCCGAGCCATCTAGATTCCACCCTTGAGTTTGCAAAGCTTCTAACCAACCGTGATAACCGCCTCCAAATAACTGTCTTAGTCATGAGACTCCCATACACAACACAATCAGATGTTAACACTAAATCCCTTCCCACCTCCGATTCTCTCGACATCATCAACCTTCCAGAAGTTTCTCTTCCCCCAAACATCGAACCAAGTTCCAGAATGATGGCTTTCCTCGAAGCACAGAAACCAAACGTCAAACAAGCCGTCTCTAATCTCACTACTAGAGAACAACATGGAACCCTCGCTGCCTTTGTTGTTGACATGTTCTGCACCAATATGATTGATATTGCCAAAGAATTTTCAGTCCCTTCGCTTGTCTTCTTCACTTCCGGTGTTGCTTCCCTTGGTTCAAATCTTCATATTCACACTCTCCGTGAAAGAGACAATGTAGATTCGAATCAGTTGCAGCAGCAGACTGAATTGGCCATACCAACTTTCGCCAACTCGGTTCCTATATACTCCCTGCCCAGTTCCATGCTAAACAAGGAATGGGAATCCTTTTTTATGAACTATGCTGGTGGCCTCAAGAAAGCAAATGGCATTATAGTAAATTCATTTGAAGAGCTAGAATCCCATGCGGTTCAATCCTTTTTCTCTCACCCTGATCTAGCTGGTTTACCGATTATTTATCCTGCCGGACCCATTATAAACCCTGAGCCCAAAACCAAGGGAACCGTTGGTTCAGATGGTATCATCAAGTGGCTTGATGATCAACCTCTTTCCTCTGTAGTTTTCCTCTGCTTTGGGACTAGGGGTACTTTCGATGAGGATCAGATTAAGGAGATTGCACGTGCTATTGAGGATAGTGGTGTCCATTTCATATGGTCTCTTCGTAAACCCAAACCGAAGGGCGTCGCCATGGTTGCACCCTCTGATTACTCTCTTACTGAATTGGGCTTGGTTTTACCCGAAGGGTTCTTAGATAGGACAGCAGGGATTGGAAGGGTCATTGGATGGGCTCCGCAGACTCAAATATTGGCCCACCCAGCCACGGGAGGATTTGTTTCCCATTGTGGCTGGAATTCAATACTTGAGAGCATATATTTTGGTGTGCCCATTGCCACGTGGCCGCTCTTTGCTGAACAACAGACTAATGCTTTTCAATTGGTGTGTGAGCTGAAGATGGCTGTGGAGATTGTGTTAGATTATAGAGTGGAGTACAATGGTGAGCCTAACTATCTTGTAACTGCTGACAAGATTGAGAGAGGAATAAGGAATGTGTTGGAAAAGGATGGAGAGGTCAGAAAGAAAGTGAAAGAGATGAGTGAAAAGAGTAGGAAAACTTTGTTAGAGGGTGGATCTTCTTACAGTCATTTAGGTCGTTTAATAGATTTTATTGTGAATCAAATATGA
Protein sequence

>MS.gene038259.t1

MKKAEVVFVPFPGPSHLDSTLEFAKLLTNRDNRLQITVLVMRLPYTTQSDVNTKSLPTSDSLDIINLPEVSLPPNIEPSSRMMAFLEAQKPNVKQAVSNLTTREQHGTLAAFVVDMFCTNMIDIAKEFSVPSLVFFTSGVASLGSNLHIHTLRERDNVDSNQLQQQTELAIPTFANSVPIYSLPSSMLNKEWESFFMNYAGGLKKANGIIVNSFEELESHAVQSFFSHPDLAGLPIIYPAGPIINPEPKTKGTVGSDGIIKWLDDQPLSSVVFLCFGTRGTFDEDQIKEIARAIEDSGVHFIWSLRKPKPKGVAMVAPSDYSLTELGLVLPEGFLDRTAGIGRVIGWAPQTQILAHPATGGFVSHCGWNSILESIYFGVPIATWPLFAEQQTNAFQLVCELKMAVEIVLDYRVEYNGEPNYLVTADKIERGIRNVLEKDGEVRKKVKEMSEKSRKTLLEGGSSYSHLGRLIDFIVNQI