AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47728

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47728.t1 MTR_5g090660 94.316 475 27 0 1 475 1 475 0.0 932
MS.gene47728.t1 MTR_5g090630 78.992 476 93 1 1 476 1 469 0.0 778
MS.gene47728.t1 MTR_5g090670 78.958 480 97 3 1 476 1 480 0.0 778
MS.gene47728.t1 MTR_5g090700 75.833 480 112 2 1 476 1 480 0.0 751
MS.gene47728.t1 MTR_5g090580 77.244 479 105 4 1 476 1 478 0.0 749
MS.gene47728.t1 MTR_5g090610 75.420 476 105 1 1 476 1 464 0.0 745
MS.gene47728.t1 MTR_5g090620 74.113 479 121 3 1 476 1 479 0.0 733
MS.gene47728.t1 MTR_5g090600 72.537 477 110 4 1 476 1 457 0.0 697
MS.gene47728.t1 MTR_5g098930 67.427 482 140 7 1 476 1 471 0.0 651
MS.gene47728.t1 MTR_5g090650 66.286 350 87 2 1 350 1 319 4.60e-162 461
MS.gene47728.t1 MTR_5g090690 60.584 411 99 5 65 466 18 374 3.12e-154 444
MS.gene47728.t1 MTR_5g070040 42.181 486 241 14 2 473 8 467 5.15e-124 370
MS.gene47728.t1 MTR_2g046820 42.531 482 243 12 1 470 1 460 1.00e-121 363
MS.gene47728.t1 MTR_2g040530 41.909 482 248 11 1 470 1 462 1.59e-121 363
MS.gene47728.t1 MTR_2g046750 42.029 483 247 12 1 470 1 463 4.70e-121 362
MS.gene47728.t1 MTR_5g070090 41.736 484 239 13 2 472 8 461 5.66e-117 352
MS.gene47728.t1 MTR_3g009510 34.908 487 287 14 1 470 1 474 1.08e-85 271
MS.gene47728.t1 MTR_6g023665 33.402 482 282 14 2 468 10 467 7.20e-75 243
MS.gene47728.t1 MTR_6g488280 33.402 482 282 15 2 468 3 460 3.30e-73 238
MS.gene47728.t1 MTR_0428s0010 33.402 482 282 15 2 468 3 460 3.30e-73 238
MS.gene47728.t1 MTR_7g117170 34.656 479 274 15 6 468 16 471 9.56e-73 238
MS.gene47728.t1 MTR_8g465670 32.787 488 284 16 2 469 4 467 1.06e-71 235
MS.gene47728.t1 MTR_8g006710 31.967 488 294 16 2 474 3 467 1.17e-69 229
MS.gene47728.t1 MTR_8g006730 32.025 484 288 15 2 468 3 462 1.45e-69 229
MS.gene47728.t1 MTR_8g006220 32.657 493 287 17 2 469 3 475 2.18e-67 224
MS.gene47728.t1 MTR_1g019510 30.898 479 297 13 2 468 3 459 2.04e-66 221
MS.gene47728.t1 MTR_8g009055 30.801 487 290 13 2 468 3 462 5.22e-66 220
MS.gene47728.t1 MTR_8g027885 32.983 476 280 16 6 468 19 468 2.50e-65 218
MS.gene47728.t1 MTR_8g008970 31.866 477 296 13 2 468 3 460 4.62e-65 224
MS.gene47728.t1 MTR_8g008970 34.155 284 158 9 189 469 528 785 2.64e-38 149
MS.gene47728.t1 MTR_0184s0040 30.913 482 295 14 2 468 18 476 7.05e-65 217
MS.gene47728.t1 MTR_0078s0190 30.913 482 295 14 2 468 18 476 7.05e-65 217
MS.gene47728.t1 MTR_8g006260 31.942 479 282 17 3 461 4 458 1.02e-64 216
MS.gene47728.t1 MTR_6g033675 30.346 491 289 14 3 470 2 462 1.84e-64 216
MS.gene47728.t1 MTR_8g027870 32.911 474 283 14 6 468 19 468 2.09e-64 216
MS.gene47728.t1 MTR_8g006270 31.893 486 285 18 2 469 3 460 2.78e-64 215
MS.gene47728.t1 MTR_0184s0030 32.573 482 275 20 2 461 3 456 3.68e-64 215
MS.gene47728.t1 MTR_8g009073 31.524 479 295 14 2 468 3 460 3.90e-64 215
MS.gene47728.t1 MTR_0078s0060 32.371 485 284 19 2 468 3 461 7.01e-64 214
MS.gene47728.t1 MTR_8g009067 31.056 483 294 15 2 469 3 461 8.69e-64 214
MS.gene47728.t1 MTR_8g009050 31.828 487 285 19 2 468 3 462 1.26e-63 213
MS.gene47728.t1 MTR_8g074550 30.452 509 297 16 2 475 5 491 1.33e-62 212
MS.gene47728.t1 MTR_0078s0010 30.691 492 296 20 2 474 3 468 1.34e-61 208
MS.gene47728.t1 MTR_6g033615 31.723 476 284 13 3 468 2 446 1.79e-61 207
MS.gene47728.t1 MTR_8g009063 31.656 477 299 14 2 468 10 469 3.03e-61 207
MS.gene47728.t1 MTR_8g008990 31.120 482 297 16 2 468 3 464 4.34e-61 207
MS.gene47728.t1 MTR_6g033625 31.893 486 284 16 3 468 2 460 6.96e-61 206
MS.gene47728.t1 MTR_8g077590 31.568 491 274 21 4 468 8 462 1.46e-60 206
MS.gene47728.t1 MTR_8g012635 30.120 498 296 16 2 474 3 473 6.59e-60 204
MS.gene47728.t1 MTR_5g019580 30.909 495 290 16 2 468 4 474 1.46e-59 203
MS.gene47728.t1 MTR_7g047030 30.928 485 292 21 2 468 3 462 1.73e-59 202
MS.gene47728.t1 MTR_7g047270 30.928 485 292 21 2 468 3 462 1.73e-59 202
MS.gene47728.t1 MTR_6g033725 30.505 495 280 15 3 470 2 459 3.77e-58 199
MS.gene47728.t1 MTR_8g012745 30.103 485 292 17 2 465 3 461 3.93e-58 199
MS.gene47728.t1 MTR_6g033660 30.228 483 293 13 6 470 5 461 4.03e-58 199
MS.gene47728.t1 MTR_7g046490 32.317 492 275 20 2 469 3 460 1.58e-57 197
MS.gene47728.t1 MTR_8g009067 33.426 359 213 10 120 469 2 343 2.18e-55 189
MS.gene47728.t1 MTR_0536s0020 29.495 495 291 17 2 470 15 477 2.31e-54 189
MS.gene47728.t1 MTR_8g012650 30.601 366 226 9 109 461 110 460 2.67e-54 189
MS.gene47728.t1 MTR_8g066610 31.537 501 272 21 6 470 10 475 6.18e-54 188
MS.gene47728.t1 MTR_6g005600 29.436 479 306 15 3 468 4 463 9.47e-54 187
MS.gene47728.t1 MTR_4g095008 29.857 489 287 15 6 473 12 465 6.09e-53 187
MS.gene47728.t1 MTR_3g479520 29.207 517 280 18 2 475 12 485 1.01e-52 185
MS.gene47728.t1 MTR_5g019580 30.000 490 273 16 2 468 56 498 1.67e-52 185
MS.gene47728.t1 MTR_5g029800 28.916 498 293 21 5 472 11 477 2.31e-52 184
MS.gene47728.t1 MTR_7g102460 28.711 512 295 18 3 475 7 487 6.31e-52 183
MS.gene47728.t1 MTR_4g485630 28.968 504 285 18 2 470 6 471 1.39e-51 182
MS.gene47728.t1 MTR_2g098430 30.390 487 269 20 2 455 3 452 2.03e-51 182
MS.gene47728.t1 MTR_7g102490 28.655 513 296 19 3 475 7 489 3.16e-51 181
MS.gene47728.t1 MTR_8g009073 32.945 343 210 9 132 468 3 331 1.21e-50 176
MS.gene47728.t1 MTR_4g118000 29.039 489 292 20 8 475 15 469 2.25e-50 178
MS.gene47728.t1 MTR_7g012120 29.218 486 304 15 5 470 16 481 6.63e-50 177
MS.gene47728.t1 MTR_4g117890 27.888 502 294 17 2 472 10 474 2.77e-49 176
MS.gene47728.t1 MTR_3g069710 29.234 496 277 14 2 474 9 453 5.89e-49 174
MS.gene47728.t1 MTR_5g072810 26.875 480 303 13 4 472 11 453 1.54e-48 173
MS.gene47728.t1 MTR_1g107360 26.978 493 301 14 5 475 9 464 3.12e-48 172
MS.gene47728.t1 MTR_5g464760 28.231 503 299 15 2 473 9 480 3.54e-48 172
MS.gene47728.t1 MTR_4g031800 28.514 498 298 19 2 472 6 472 4.66e-48 172
MS.gene47728.t1 MTR_5g067170 27.846 492 298 18 8 470 14 477 6.74e-48 172
MS.gene47728.t1 MTR_2g035020 27.935 494 303 18 5 470 11 479 7.40e-48 172
MS.gene47728.t1 MTR_3g079480 28.346 508 296 17 2 475 18 491 1.87e-47 171
MS.gene47728.t1 MTR_8g012730 33.935 277 139 7 194 460 54 296 2.30e-47 166
MS.gene47728.t1 MTR_5g045970 25.540 509 310 18 5 474 16 494 2.31e-47 171
MS.gene47728.t1 MTR_6g035185 26.923 494 303 17 8 470 14 480 6.26e-47 169
MS.gene47728.t1 MTR_1g019520 39.381 226 120 3 257 476 2 216 7.93e-47 162
MS.gene47728.t1 MTR_4g094220 29.159 511 278 20 3 469 5 475 8.55e-47 169
MS.gene47728.t1 MTR_4g024020 28.600 507 281 20 3 463 7 478 1.34e-46 169
MS.gene47728.t1 MTR_4g094920 27.789 493 294 14 5 473 26 480 1.59e-46 169
MS.gene47728.t1 MTR_4g117960 26.273 491 308 17 8 470 14 478 2.63e-46 168
MS.gene47728.t1 MTR_3g069690 27.856 499 286 16 2 476 5 453 2.94e-46 167
MS.gene47728.t1 MTR_3g479490 27.273 506 304 17 2 475 3 476 3.52e-46 167
MS.gene47728.t1 MTR_6g038240 27.347 490 290 15 5 473 11 455 4.08e-46 167
MS.gene47728.t1 MTR_2g034990 27.992 493 304 20 5 470 11 479 1.01e-45 166
MS.gene47728.t1 MTR_5g464810 28.144 501 296 15 4 473 11 478 1.44e-45 166
MS.gene47728.t1 MTR_5g064240 28.144 501 296 15 4 473 11 478 1.44e-45 166
MS.gene47728.t1 MTR_4g117980 28.947 494 292 22 8 470 14 479 1.74e-45 166
MS.gene47728.t1 MTR_8g466240 29.652 489 278 18 3 469 6 450 1.98e-45 165
MS.gene47728.t1 MTR_1g107350 28.631 482 295 16 5 465 8 461 2.06e-45 165
MS.gene47728.t1 MTR_6g014220 26.233 507 304 17 2 473 7 478 2.14e-45 165
MS.gene47728.t1 MTR_3g008010 26.706 513 292 19 3 473 8 478 4.00e-45 164
MS.gene47728.t1 MTR_6g035265 26.789 489 301 17 8 470 14 471 5.45e-45 164
MS.gene47728.t1 MTR_4g117950 30.242 496 281 21 2 470 3 460 5.59e-45 164
MS.gene47728.t1 MTR_1g107285 26.613 496 296 13 5 472 8 463 6.84e-45 164
MS.gene47728.t1 MTR_0036s0220 28.827 503 288 15 5 473 12 478 7.81e-45 164
MS.gene47728.t1 MTR_5g035580 27.126 494 285 16 5 474 13 455 8.14e-45 163
MS.gene47728.t1 MTR_7g117405 26.946 501 303 17 7 475 14 483 8.90e-45 163
MS.gene47728.t1 MTR_5g072840 26.501 483 302 12 4 474 9 450 9.76e-45 162
MS.gene47728.t1 MTR_0536s0010 27.879 495 293 18 2 470 18 474 1.99e-44 162
MS.gene47728.t1 MTR_5g072830 25.988 481 303 11 4 472 9 448 2.63e-44 161
MS.gene47728.t1 MTR_7g070610 27.183 504 297 19 5 470 13 484 2.65e-44 162
MS.gene47728.t1 MTR_1g062380 26.295 502 314 16 6 474 17 495 3.21e-44 162
MS.gene47728.t1 MTR_6g014290 25.838 507 311 16 2 475 7 481 3.89e-44 162
MS.gene47728.t1 MTR_7g102450 27.218 496 300 17 7 475 13 474 5.28e-44 161
MS.gene47728.t1 MTR_7g080900 25.845 503 287 16 2 473 9 456 5.68e-44 160
MS.gene47728.t1 MTR_7g071040 25.956 497 316 16 3 470 15 488 9.14e-44 161
MS.gene47728.t1 MTR_5g016660 27.397 511 289 16 3 469 8 480 1.00e-43 160
MS.gene47728.t1 MTR_8g012630 39.336 211 110 6 259 461 204 404 1.07e-43 159
MS.gene47728.t1 MTR_7g070660 26.358 497 305 18 5 470 11 477 2.09e-43 160
MS.gene47728.t1 MTR_4g064987 28.571 476 298 16 3 473 6 444 2.27e-43 159
MS.gene47728.t1 MTR_1g107380 28.721 383 223 10 109 473 123 473 3.00e-43 159
MS.gene47728.t1 MTR_4g064987 28.571 476 304 16 3 473 6 450 4.12e-43 158
MS.gene47728.t1 MTR_8g064870 25.866 491 313 14 5 472 11 473 4.19e-43 159
MS.gene47728.t1 MTR_5g040030 26.008 496 317 14 2 469 11 484 5.67e-43 159
MS.gene47728.t1 MTR_3g049970 26.477 491 314 14 5 475 9 472 8.45e-43 158
MS.gene47728.t1 MTR_7g070740 26.000 500 311 15 3 470 9 481 1.44e-42 157
MS.gene47728.t1 MTR_8g064880 28.348 448 272 14 6 430 10 431 1.63e-42 157
MS.gene47728.t1 MTR_5g072820 26.611 481 300 12 4 472 9 448 1.89e-42 156
MS.gene47728.t1 MTR_7g070800 26.680 491 312 17 5 470 6 473 1.95e-42 157
MS.gene47728.t1 MTR_4g485590 31.455 426 220 17 4 407 8 383 2.15e-42 155
MS.gene47728.t1 MTR_7g070780 27.255 499 302 19 5 470 11 481 2.15e-42 157
MS.gene47728.t1 MTR_7g055710 25.963 493 316 16 5 470 11 481 2.28e-42 157
MS.gene47728.t1 MTR_7g070860 25.050 499 302 14 2 470 4 460 3.88e-42 156
MS.gene47728.t1 MTR_7g102550 29.268 492 283 20 7 461 11 474 5.09e-42 156
MS.gene47728.t1 MTR_0288s0020 25.651 499 300 17 2 473 7 461 5.54e-42 155
MS.gene47728.t1 MTR_0891s0010 33.808 281 143 8 210 475 40 292 6.10e-42 151
MS.gene47728.t1 MTR_5g087620 27.977 529 285 20 2 474 7 495 1.88e-41 154
MS.gene47728.t1 MTR_2g035040 27.390 387 242 15 107 470 14 384 2.21e-41 152
MS.gene47728.t1 MTR_7g070930 25.806 496 314 15 5 470 14 485 2.38e-41 154
MS.gene47728.t1 MTR_3g031450 26.721 494 278 13 4 470 17 453 2.86e-41 154
MS.gene47728.t1 MTR_7g102560 25.050 503 316 16 7 475 11 486 4.00e-41 154
MS.gene47728.t1 MTR_0009s0240 27.593 482 303 14 3 469 5 455 4.78e-41 153
MS.gene47728.t1 MTR_8g059425 25.984 508 304 18 2 473 7 478 8.61e-41 152
MS.gene47728.t1 MTR_3g009490 41.361 191 100 6 285 470 3 186 1.20e-40 144
MS.gene47728.t1 MTR_1g107315 26.200 500 310 13 3 476 6 472 1.24e-40 152
MS.gene47728.t1 MTR_6g014040 24.754 509 312 18 2 473 7 481 1.40e-40 152
MS.gene47728.t1 MTR_5g016480 26.471 510 296 19 2 474 5 472 1.56e-40 152
MS.gene47728.t1 MTR_5g045960 26.938 516 302 19 2 475 6 488 1.69e-40 152
MS.gene47728.t1 MTR_4g108250 26.627 507 299 16 5 470 11 485 1.74e-40 152
MS.gene47728.t1 MTR_6g014270 25.195 512 305 13 3 473 5 479 1.93e-40 152
MS.gene47728.t1 MTR_1g032490 25.911 494 307 13 5 472 10 470 2.14e-40 151
MS.gene47728.t1 MTR_7g070940 25.904 498 307 18 2 470 6 470 2.14e-40 151
MS.gene47728.t1 MTR_1g029540 26.722 479 297 18 10 472 19 459 2.63e-40 150
MS.gene47728.t1 MTR_7g080935 24.540 489 309 14 3 474 9 454 2.73e-40 151
MS.gene47728.t1 MTR_3g479470 27.540 443 266 15 2 412 10 429 3.13e-40 151
MS.gene47728.t1 MTR_6g014250 24.852 507 311 15 2 473 7 478 3.27e-40 151
MS.gene47728.t1 MTR_6g038300 25.358 489 296 14 5 470 11 453 3.60e-40 150
MS.gene47728.t1 MTR_5g035560 26.139 505 276 18 5 474 11 453 5.65e-40 150
MS.gene47728.t1 MTR_7g070910 26.854 499 309 17 3 470 9 482 6.67e-40 150
MS.gene47728.t1 MTR_3g479610 31.930 285 151 8 206 475 59 315 9.17e-40 146
MS.gene47728.t1 MTR_8g083290 26.389 504 291 15 6 473 5 464 1.22e-39 149
MS.gene47728.t1 MTR_5g075440 25.309 486 311 12 4 474 9 457 1.25e-39 149
MS.gene47728.t1 MTR_6g038230 25.051 487 283 14 4 461 10 443 1.82e-39 148
MS.gene47728.t1 MTR_6g014170 25.349 501 300 16 2 473 7 462 4.42e-39 147
MS.gene47728.t1 MTR_4g008630 35.918 245 132 10 237 472 234 462 4.85e-39 147
MS.gene47728.t1 MTR_6g078320 24.691 486 329 16 4 470 10 477 6.40e-39 147
MS.gene47728.t1 MTR_7g070810 25.000 496 317 16 2 470 6 473 6.83e-39 147
MS.gene47728.t1 MTR_6g038200 25.311 482 288 14 4 461 10 443 7.99e-39 147
MS.gene47728.t1 MTR_7g080950 25.000 492 303 16 3 474 4 449 8.17e-39 147
MS.gene47728.t1 MTR_4g485640 28.954 373 234 10 111 469 308 663 9.67e-39 149
MS.gene47728.t1 MTR_3g031400 26.294 483 276 14 1 461 14 438 1.15e-38 146
MS.gene47728.t1 MTR_7g011470 24.805 512 293 17 2 473 7 466 1.68e-38 146
MS.gene47728.t1 MTR_4g485620 29.659 381 220 10 111 470 99 452 2.94e-38 145
MS.gene47728.t1 MTR_7g080940 24.899 494 305 16 3 476 9 456 3.09e-38 145
MS.gene47728.t1 MTR_6g013960 25.641 507 309 18 2 473 7 480 3.19e-38 145
MS.gene47728.t1 MTR_7g013200 22.869 481 306 18 9 473 9 440 4.11e-38 144
MS.gene47728.t1 MTR_6g035295 25.948 501 306 16 5 470 12 482 5.56e-38 145
MS.gene47728.t1 MTR_6g038220 26.489 487 273 17 5 461 11 442 9.34e-38 144
MS.gene47728.t1 MTR_7g102520 25.591 508 307 18 7 474 14 490 1.17e-37 144
MS.gene47728.t1 MTR_6g014020 24.458 507 315 18 2 473 7 480 1.21e-37 144
MS.gene47728.t1 MTR_1g040310 26.946 501 297 17 5 470 15 481 1.54e-37 144
MS.gene47728.t1 MTR_6g014050 26.410 390 231 11 109 473 123 481 1.81e-37 143
MS.gene47728.t1 MTR_4g128690 28.173 394 241 11 85 472 95 452 2.29e-37 142
MS.gene47728.t1 MTR_5g039900 26.121 513 286 18 5 469 13 480 2.47e-37 143
MS.gene47728.t1 MTR_6g014150 26.535 505 307 16 2 473 4 477 3.78e-37 142
MS.gene47728.t1 MTR_7g011470 24.016 508 298 15 2 473 7 462 4.19e-37 142
MS.gene47728.t1 MTR_7g013220 24.795 488 311 18 1 471 1 449 4.45e-37 142
MS.gene47728.t1 MTR_8g071070 26.747 501 306 17 3 476 5 471 5.43e-37 142
MS.gene47728.t1 MTR_6g014187 25.737 509 306 19 2 473 7 480 6.88e-37 142
MS.gene47728.t1 MTR_6g013450 25.145 517 298 19 3 473 8 481 7.95e-37 142
MS.gene47728.t1 MTR_2g008210 24.655 507 310 17 2 473 8 477 9.08e-37 141
MS.gene47728.t1 MTR_3g084540 25.407 492 315 16 7 472 8 473 9.55e-37 141
MS.gene47728.t1 MTR_6g013440 25.636 511 304 18 2 473 8 481 9.89e-37 141
MS.gene47728.t1 MTR_6g013990 24.704 506 313 16 2 473 7 478 1.11e-36 141
MS.gene47728.t1 MTR_8g044140 29.365 378 228 10 113 470 88 446 1.19e-36 140
MS.gene47728.t1 MTR_8g032950 25.558 493 314 16 5 470 12 478 1.45e-36 141
MS.gene47728.t1 MTR_1g107365 26.653 499 283 18 5 472 45 491 1.82e-36 141
MS.gene47728.t1 MTR_8g083280 24.554 505 296 15 5 473 7 462 2.03e-36 140
MS.gene47728.t1 MTR_5g072860 25.304 494 295 14 5 469 18 466 2.39e-36 140
MS.gene47728.t1 MTR_3g084530 25.102 490 318 14 7 472 8 472 3.65e-36 139
MS.gene47728.t1 MTR_4g082820 29.095 409 247 17 5 392 4 390 3.74e-36 139
MS.gene47728.t1 MTR_1g107375 25.100 498 291 13 5 472 8 453 5.48e-36 139
MS.gene47728.t1 MTR_6g011340 25.882 510 304 19 2 473 7 480 7.27e-36 139
MS.gene47728.t1 MTR_6g014310 25.147 509 307 17 3 473 9 481 7.82e-36 139
MS.gene47728.t1 MTR_7g071050 26.316 475 265 19 3 455 11 422 7.83e-36 138
MS.gene47728.t1 MTR_5g058320 24.750 501 304 17 3 473 8 465 2.10e-35 137
MS.gene47728.t1 MTR_6g014200 27.040 429 250 14 77 473 80 477 2.18e-35 137
MS.gene47728.t1 MTR_8g090095 24.390 492 301 16 10 472 30 479 2.57e-35 137
MS.gene47728.t1 MTR_5g031830 26.575 508 284 18 5 472 12 470 4.04e-35 137
MS.gene47728.t1 MTR_2g059240 28.684 380 219 10 113 473 123 469 4.60e-35 136
MS.gene47728.t1 MTR_7g070870 29.677 310 177 8 169 470 180 456 5.23e-35 136
MS.gene47728.t1 MTR_3g084520 23.819 487 306 14 7 461 8 461 1.50e-34 135
MS.gene47728.t1 MTR_7g039550 33.036 224 137 3 249 469 45 258 5.50e-34 129
MS.gene47728.t1 MTR_7g013180 23.469 490 309 19 1 471 1 443 9.24e-34 132
MS.gene47728.t1 MTR_4g082810 29.932 294 184 8 110 392 110 392 1.15e-33 131
MS.gene47728.t1 MTR_6g014190 30.000 280 152 8 208 473 38 287 1.95e-33 128
MS.gene47728.t1 MTR_7g013260 24.375 480 296 20 9 471 10 439 3.09e-33 131
MS.gene47728.t1 MTR_7g013240 23.431 478 302 17 9 471 10 438 3.29e-33 130
MS.gene47728.t1 MTR_7g470610 30.169 295 165 8 122 406 7 270 3.95e-33 127
MS.gene47728.t1 MTR_7g070583 30.169 295 165 8 122 406 7 270 3.95e-33 127
MS.gene47728.t1 MTR_6g014300 26.389 504 293 22 2 473 9 466 4.04e-33 131
MS.gene47728.t1 MTR_6g013920 25.964 389 234 13 109 473 121 479 7.68e-33 130
MS.gene47728.t1 MTR_8g088560 25.826 484 279 16 5 460 10 441 8.16e-33 130
MS.gene47728.t1 MTR_5g031840 25.151 497 311 16 1 472 1 461 8.99e-33 130
MS.gene47728.t1 MTR_6g013900 25.240 416 249 12 92 475 97 482 1.05e-32 130
MS.gene47728.t1 MTR_5g004940 32.031 256 132 7 220 472 161 377 5.27e-32 126
MS.gene47728.t1 MTR_8g009840 35.455 220 127 5 256 468 310 521 7.83e-32 128
MS.gene47728.t1 MTR_5g031860 26.938 516 271 21 5 472 12 469 9.17e-32 127
MS.gene47728.t1 MTR_0477s0010 31.651 218 121 5 259 473 125 317 1.14e-30 121
MS.gene47728.t1 MTR_2086s0010 34.359 195 103 4 283 475 3 174 1.47e-30 117
MS.gene47728.t1 MTR_1996s0010 34.359 195 103 4 283 475 3 174 1.47e-30 117
MS.gene47728.t1 MTR_5g027210 24.414 512 309 19 5 472 4 481 2.50e-30 123
MS.gene47728.t1 MTR_8g043470 32.727 220 120 5 257 473 184 378 2.62e-30 121
MS.gene47728.t1 MTR_8g007585 29.911 224 127 4 254 473 195 392 6.02e-30 120
MS.gene47728.t1 MTR_6g014240 24.111 506 288 17 2 473 4 447 2.60e-29 120
MS.gene47728.t1 MTR_4g123553 27.835 485 257 19 1 449 11 438 2.70e-29 120
MS.gene47728.t1 MTR_5g098960 26.752 471 275 17 1 450 3 424 7.20e-29 119
MS.gene47728.t1 MTR_7g070760 31.280 211 101 3 204 406 28 202 6.79e-27 107
MS.gene47728.t1 MTR_8g068330 26.693 502 299 21 2 476 5 464 8.94e-27 112
MS.gene47728.t1 MTR_2g046620 33.600 250 139 9 205 449 212 439 1.27e-26 112
MS.gene47728.t1 MTR_4g128720 24.380 484 315 15 1 472 11 455 2.14e-26 111
MS.gene47728.t1 MTR_2g008225 33.852 257 139 10 202 449 209 443 5.03e-26 110
MS.gene47728.t1 MTR_0078s0200 27.019 322 202 11 2 307 3 307 6.04e-26 108
MS.gene47728.t1 MTR_2g008220 33.071 254 143 9 201 449 211 442 7.14e-26 110
MS.gene47728.t1 MTR_5g072850 32.212 208 112 5 189 392 140 322 8.40e-26 108
MS.gene47728.t1 MTR_8g068360 25.966 466 297 18 2 449 9 444 1.63e-25 109
MS.gene47728.t1 MTR_8g068340 25.153 489 315 17 2 472 9 464 2.31e-25 108
MS.gene47728.t1 MTR_2g008226 30.952 252 143 9 205 450 222 448 1.04e-24 107
MS.gene47728.t1 MTR_4g077960 32.443 262 134 12 201 449 184 415 7.78e-24 103
MS.gene47728.t1 MTR_8g007565 33.040 227 120 8 231 446 234 439 9.21e-24 103
MS.gene47728.t1 MTR_8g007650 33.040 227 120 8 231 446 234 439 1.80e-23 103
MS.gene47728.t1 MTR_7g070995 36.923 130 78 2 345 470 13 142 2.19e-23 96.7
MS.gene47728.t1 MTR_7g067120 24.180 488 285 17 2 472 6 425 3.96e-23 102
MS.gene47728.t1 MTR_6g042310 26.708 483 265 22 1 449 14 441 6.21e-23 101
MS.gene47728.t1 MTR_8g006230 27.848 237 160 6 75 307 18 247 7.24e-23 98.6
MS.gene47728.t1 MTR_5g066410 32.035 231 121 8 231 446 206 415 1.01e-22 100
MS.gene47728.t1 MTR_0536s0030 36.424 151 87 5 328 470 200 349 1.31e-22 99.4
MS.gene47728.t1 MTR_6g014185 28.571 280 130 10 206 473 124 345 1.48e-22 99.4
MS.gene47728.t1 MTR_2g014900 30.041 243 141 6 231 472 238 452 5.37e-22 98.6
MS.gene47728.t1 MTR_5g066390 31.757 148 87 2 328 473 80 215 1.49e-21 93.2
MS.gene47728.t1 MTR_3g009500 29.699 266 167 10 1 252 1 260 1.52e-21 94.7
MS.gene47728.t1 MTR_3g435310 35.122 205 108 8 248 449 215 397 2.03e-21 96.7
MS.gene47728.t1 MTR_7g067330 23.457 486 291 15 2 472 6 425 2.37e-21 96.7
MS.gene47728.t1 MTR_6g036650 36.410 195 99 8 258 449 276 448 2.91e-21 96.7
MS.gene47728.t1 MTR_8g056740 28.339 307 150 13 111 406 55 302 4.50e-21 95.5
MS.gene47728.t1 MTR_6g014000 34.783 138 74 4 340 474 33 157 9.21e-21 95.1
MS.gene47728.t1 MTR_4g079250 28.194 227 142 5 240 465 241 447 5.20e-19 89.7
MS.gene47728.t1 MTR_3g009520 28.235 255 166 10 2 243 3 253 2.96e-18 84.7
MS.gene47728.t1 MTR_6g014160 23.920 301 161 9 109 388 104 357 8.44e-18 85.5
MS.gene47728.t1 MTR_1g090270 27.155 232 149 7 240 469 245 458 8.84e-18 85.9
MS.gene47728.t1 MTR_4g079270 25.283 265 174 6 202 465 206 447 1.22e-17 85.5
MS.gene47728.t1 MTR_4g059370 28.302 212 135 6 260 469 189 385 3.67e-17 83.6
MS.gene47728.t1 MTR_2g083480 28.761 226 138 6 233 456 234 438 3.77e-17 84.0
MS.gene47728.t1 MTR_1g107325 31.008 129 81 2 335 461 219 341 1.26e-16 81.6
MS.gene47728.t1 MTR_2g083430 30.088 226 135 7 233 456 234 438 1.42e-16 82.4
MS.gene47728.t1 MTR_5g090680 80.952 42 8 0 1 42 1 42 8.01e-16 73.9
MS.gene47728.t1 MTR_6g014186 22.441 508 286 19 2 473 4 439 2.28e-15 78.6
MS.gene47728.t1 MTR_6g052375 31.383 188 100 7 171 350 28 194 2.35e-15 77.4
MS.gene47728.t1 MTR_2g083380 27.413 259 162 7 200 456 221 455 1.73e-14 75.9
MS.gene47728.t1 MTR_5g090590 61.111 54 21 0 401 454 1 54 1.37e-13 65.9
MS.gene47728.t1 MTR_2g083420 26.641 259 129 9 200 456 215 414 1.88e-12 69.3
MS.gene47728.t1 MTR_2g009740 32.653 98 50 1 254 351 197 278 1.20e-11 65.9
MS.gene47728.t1 MTR_1g090280 26.042 192 125 7 283 472 135 311 1.40e-11 65.9
MS.gene47728.t1 MTR_0475s0030 44.828 58 32 0 355 412 11 68 1.65e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47728.t1 AT3G21760 45.918 490 242 10 3 476 2 484 3.75e-139 409
MS.gene47728.t1 AT3G21750 41.189 488 256 9 3 476 2 472 4.66e-131 388
MS.gene47728.t1 AT3G21790 40.530 491 265 8 3 476 2 482 1.32e-127 380
MS.gene47728.t1 AT4G15280 41.822 483 265 9 3 476 2 477 1.35e-125 374
MS.gene47728.t1 AT4G15280 41.822 483 265 9 3 476 34 509 2.77e-125 374
MS.gene47728.t1 AT3G21780 41.788 481 263 8 3 476 2 472 4.78e-125 373
MS.gene47728.t1 AT3G21800 42.977 477 251 11 1 465 1 468 6.74e-123 367
MS.gene47728.t1 AT1G07250 41.564 486 249 12 1 469 2 469 5.74e-119 357
MS.gene47728.t1 AT1G07240 40.041 492 262 10 1 474 1 477 4.68e-116 350
MS.gene47728.t1 AT2G29740 41.068 487 250 14 2 470 5 472 1.41e-114 346
MS.gene47728.t1 AT1G07260 39.148 493 256 15 3 474 4 473 3.71e-112 340
MS.gene47728.t1 AT2G29730 40.125 481 254 12 1 469 1 459 1.16e-111 338
MS.gene47728.t1 AT4G15260 44.384 365 192 6 116 476 1 358 3.14e-108 325
MS.gene47728.t1 AT2G29710 39.474 494 247 17 1 473 1 463 3.58e-104 319
MS.gene47728.t1 AT2G29750 39.596 495 257 17 2 476 5 477 7.84e-104 318
MS.gene47728.t1 AT3G16520 33.814 485 278 15 1 470 1 457 7.46e-79 253
MS.gene47728.t1 AT3G16520 33.686 472 270 15 1 457 1 444 5.61e-76 245
MS.gene47728.t1 AT3G16520 33.686 472 270 15 1 457 1 444 1.02e-75 244
MS.gene47728.t1 AT4G01070 33.192 473 290 12 2 465 5 460 1.91e-73 239
MS.gene47728.t1 AT1G01420 33.263 472 290 11 5 468 8 462 2.42e-67 224
MS.gene47728.t1 AT1G01420 33.263 472 290 11 5 468 11 465 3.01e-67 223
MS.gene47728.t1 AT4G36770 33.120 468 265 16 8 455 7 446 9.97e-64 213
MS.gene47728.t1 AT5G26310 31.875 480 274 20 12 468 14 463 3.01e-63 213
MS.gene47728.t1 AT5G66690 31.185 481 266 20 12 464 14 457 1.73e-61 208
MS.gene47728.t1 AT1G01390 32.075 477 292 13 5 469 8 464 3.55e-61 207
MS.gene47728.t1 AT1G01390 32.075 477 292 13 5 469 25 481 5.96e-61 207
MS.gene47728.t1 AT2G18570 31.198 484 289 18 1 465 1 459 1.13e-60 206
MS.gene47728.t1 AT3G50740 29.026 503 305 19 1 476 3 480 2.04e-58 200
MS.gene47728.t1 AT5G12890 30.261 499 292 20 2 470 7 479 2.01e-55 192
MS.gene47728.t1 AT2G15480 28.994 507 301 12 2 472 7 490 2.18e-54 190
MS.gene47728.t1 AT2G15480 29.495 495 300 12 2 470 7 478 3.27e-54 189
MS.gene47728.t1 AT2G36760 29.518 498 302 17 7 476 16 492 5.96e-53 186
MS.gene47728.t1 AT2G36770 28.968 504 297 20 7 476 16 492 1.66e-52 185
MS.gene47728.t1 AT2G15490 28.457 499 307 13 2 472 4 480 1.91e-52 184
MS.gene47728.t1 AT2G15490 28.773 497 301 14 2 470 4 475 4.66e-52 183
MS.gene47728.t1 AT2G36750 28.543 501 298 16 7 474 12 485 1.38e-51 182
MS.gene47728.t1 AT2G18560 31.877 389 228 14 90 465 5 369 1.79e-51 179
MS.gene47728.t1 AT2G36780 28.773 497 303 15 7 474 16 490 1.27e-50 179
MS.gene47728.t1 AT4G34138 29.058 499 296 16 3 472 9 478 3.48e-50 178
MS.gene47728.t1 AT4G34131 29.051 506 287 18 2 470 7 477 5.69e-50 177
MS.gene47728.t1 AT1G22400 30.271 479 262 19 2 446 10 450 1.43e-48 174
MS.gene47728.t1 AT1G22380 27.490 502 304 12 2 473 10 481 3.90e-48 172
MS.gene47728.t1 AT2G36800 27.525 505 298 18 7 473 14 488 4.18e-48 173
MS.gene47728.t1 AT3G46700 26.789 489 292 13 1 472 5 444 1.21e-47 171
MS.gene47728.t1 AT3G46650 26.305 479 294 13 3 474 8 434 3.64e-47 169
MS.gene47728.t1 AT1G22360 27.470 506 299 15 2 473 7 478 3.72e-47 170
MS.gene47728.t1 AT3G46660 29.545 484 287 19 3 472 12 455 4.74e-47 169
MS.gene47728.t1 AT5G59590 28.542 480 295 16 1 470 6 447 1.48e-46 167
MS.gene47728.t1 AT3G55710 29.459 499 279 16 2 474 5 456 3.50e-46 167
MS.gene47728.t1 AT3G46690 26.775 493 292 16 1 472 5 449 4.28e-46 166
MS.gene47728.t1 AT3G46670 28.484 488 279 20 6 472 10 448 5.42e-46 166
MS.gene47728.t1 AT3G53160 29.077 509 288 20 7 475 10 485 1.12e-45 166
MS.gene47728.t1 AT4G34135 28.416 461 275 14 2 434 8 441 1.40e-45 166
MS.gene47728.t1 AT5G59580 27.766 479 295 16 3 470 7 445 1.55e-45 165
MS.gene47728.t1 AT1G22360 28.315 445 266 12 2 415 7 429 3.63e-45 164
MS.gene47728.t1 AT1G22370 29.283 502 290 16 2 473 10 476 4.22e-45 164
MS.gene47728.t1 AT1G22340 27.202 511 295 18 2 473 10 482 1.52e-44 163
MS.gene47728.t1 AT2G36790 27.778 504 299 17 7 474 15 489 2.00e-44 163
MS.gene47728.t1 AT3G55700 29.158 487 292 16 2 474 5 452 1.10e-43 160
MS.gene47728.t1 AT1G78270 26.834 518 287 20 2 473 10 481 7.59e-43 158
MS.gene47728.t1 AT3G46680 26.423 492 293 17 2 472 6 449 1.51e-42 157
MS.gene47728.t1 AT4G15490 26.113 494 316 15 2 475 5 469 3.81e-42 156
MS.gene47728.t1 AT2G31790 25.904 498 290 14 2 469 5 453 7.27e-42 155
MS.gene47728.t1 AT3G11340 27.126 494 284 15 3 474 7 446 1.24e-41 154
MS.gene47728.t1 AT5G05870 28.364 483 299 15 3 472 6 454 2.57e-41 154
MS.gene47728.t1 AT5G03490 27.984 486 290 14 2 469 16 459 4.16e-41 153
MS.gene47728.t1 AT4G15500 25.150 501 297 14 6 474 10 464 4.58e-41 153
MS.gene47728.t1 AT5G05880 27.479 484 290 13 6 472 9 448 1.01e-40 152
MS.gene47728.t1 AT2G31750 25.941 505 291 16 3 476 6 458 1.07e-40 152
MS.gene47728.t1 AT2G31750 26.096 502 288 16 3 473 6 455 1.15e-40 152
MS.gene47728.t1 AT1G05680 26.955 486 294 15 4 469 5 449 2.98e-40 150
MS.gene47728.t1 AT1G73880 26.854 499 296 15 3 474 12 468 4.72e-40 150
MS.gene47728.t1 AT4G01070 30.398 352 229 9 2 347 5 346 4.87e-40 147
MS.gene47728.t1 AT2G30150 26.250 480 310 11 5 476 13 456 5.97e-40 150
MS.gene47728.t1 AT1G51210 27.862 463 268 19 3 447 18 432 7.06e-40 149
MS.gene47728.t1 AT4G15550 26.434 488 304 16 7 470 15 471 1.04e-39 149
MS.gene47728.t1 AT5G38010 28.257 499 278 18 2 472 7 453 1.72e-39 148
MS.gene47728.t1 AT1G24100 26.347 501 287 17 3 472 9 458 2.66e-39 148
MS.gene47728.t1 AT2G30150 26.050 476 308 11 9 476 1 440 3.18e-39 147
MS.gene47728.t1 AT2G16890 27.767 497 294 17 6 476 10 467 3.53e-39 148
MS.gene47728.t1 AT1G05675 25.306 490 297 15 4 469 5 449 7.31e-39 147
MS.gene47728.t1 AT4G15480 27.559 381 238 11 95 461 111 467 1.06e-38 147
MS.gene47728.t1 AT2G43820 26.349 482 283 17 2 461 4 435 1.41e-38 146
MS.gene47728.t1 AT5G14860 27.711 498 296 17 7 472 10 475 1.74e-38 146
MS.gene47728.t1 AT2G30140 24.843 479 312 13 5 474 13 452 5.46e-38 144
MS.gene47728.t1 AT2G30140 24.486 486 306 13 5 474 13 453 1.94e-37 143
MS.gene47728.t1 AT5G38040 26.638 473 287 17 13 469 18 446 6.86e-37 141
MS.gene47728.t1 AT1G05560 25.820 488 315 16 1 475 1 454 2.61e-36 140
MS.gene47728.t1 AT1G05560 25.934 482 310 16 7 475 57 504 4.42e-36 140
MS.gene47728.t1 AT2G43840 26.789 489 292 16 3 472 5 446 8.12e-36 138
MS.gene47728.t1 AT2G23260 26.400 500 286 14 2 472 7 453 1.05e-35 138
MS.gene47728.t1 AT2G43840 26.789 489 292 16 3 472 5 446 1.06e-35 138
MS.gene47728.t1 AT4G14090 27.789 493 283 20 2 470 10 453 2.51e-35 137
MS.gene47728.t1 AT3G21560 24.800 500 305 17 5 472 12 472 3.33e-35 137
MS.gene47728.t1 AT3G46720 25.208 480 305 15 2 472 6 440 6.73e-35 135
MS.gene47728.t1 AT5G05890 27.122 483 297 16 6 472 9 452 7.13e-35 135
MS.gene47728.t1 AT2G36970 22.754 501 328 13 2 476 7 474 1.06e-34 135
MS.gene47728.t1 AT2G28080 23.232 495 312 13 9 476 22 475 1.24e-34 135
MS.gene47728.t1 AT5G05900 27.893 484 287 17 6 472 9 447 1.38e-34 135
MS.gene47728.t1 AT3G02100 24.405 504 304 15 1 476 9 463 3.19e-34 134
MS.gene47728.t1 AT2G23250 28.643 398 227 12 94 472 76 435 9.61e-34 132
MS.gene47728.t1 AT1G10400 25.050 503 309 16 1 475 3 465 1.00e-33 132
MS.gene47728.t1 AT2G16890 27.400 427 257 13 5 408 9 405 2.31e-33 131
MS.gene47728.t1 AT1G22370 31.288 326 168 11 171 473 14 306 2.42e-33 128
MS.gene47728.t1 AT3G53150 24.381 525 317 15 2 476 19 513 4.12e-33 132
MS.gene47728.t1 AT5G17050 28.856 402 237 14 85 474 94 458 9.81e-33 130
MS.gene47728.t1 AT5G17030 33.094 278 148 9 203 474 212 457 1.02e-31 127
MS.gene47728.t1 AT5G05860 26.987 478 300 16 6 473 10 448 1.13e-31 127
MS.gene47728.t1 AT1G06000 27.004 474 290 12 2 469 7 430 4.13e-31 125
MS.gene47728.t1 AT1G05530 25.847 472 310 14 1 461 1 443 7.74e-31 124
MS.gene47728.t1 AT1G30530 27.344 384 215 12 109 473 113 451 4.37e-29 119
MS.gene47728.t1 AT4G15270 32.258 217 125 6 3 205 2 210 5.58e-29 114
MS.gene47728.t1 AT4G15270 31.304 230 136 6 3 218 2 223 1.35e-28 115
MS.gene47728.t1 AT5G17040 27.822 381 215 10 109 474 106 441 1.82e-28 117
MS.gene47728.t1 AT5G37950 32.394 284 149 9 109 379 83 336 3.49e-28 115
MS.gene47728.t1 AT5G54010 25.358 489 297 17 3 472 4 443 1.04e-27 115
MS.gene47728.t1 AT5G37950 30.714 280 165 8 109 379 83 342 1.55e-27 113
MS.gene47728.t1 AT3G22250 23.849 478 294 15 2 451 5 440 2.33e-27 114
MS.gene47728.t1 AT5G17040 28.116 345 196 9 145 474 32 339 1.73e-26 110
MS.gene47728.t1 AT5G49690 27.329 483 262 24 2 449 4 432 2.93e-26 111
MS.gene47728.t1 AT4G15270 33.498 203 113 6 3 191 2 196 3.08e-26 106
MS.gene47728.t1 AT2G26480 25.403 496 300 18 1 476 4 449 1.15e-25 109
MS.gene47728.t1 AT1G64910 29.710 276 169 7 202 476 190 441 3.19e-25 108
MS.gene47728.t1 AT3G29630 29.603 277 171 8 202 476 190 444 5.21e-25 107
MS.gene47728.t1 AT5G65550 24.421 475 290 19 3 450 7 439 3.14e-24 105
MS.gene47728.t1 AT5G53990 28.261 276 173 6 202 476 190 441 8.28e-24 103
MS.gene47728.t1 AT1G50580 30.292 274 166 7 201 472 188 438 8.92e-24 103
MS.gene47728.t1 AT4G27560 28.000 275 173 6 203 476 197 447 3.52e-23 102
MS.gene47728.t1 AT3G29630 28.261 276 176 7 202 476 164 418 1.01e-22 100
MS.gene47728.t1 AT5G54060 24.694 490 313 17 6 476 14 466 1.68e-22 100
MS.gene47728.t1 AT4G27570 27.636 275 174 6 203 476 197 447 2.03e-22 100
MS.gene47728.t1 AT1G64920 27.740 292 178 7 192 476 180 445 2.62e-22 99.8
MS.gene47728.t1 AT2G22930 23.504 468 308 13 10 470 11 435 1.23e-21 97.4
MS.gene47728.t1 AT4G09500 24.583 480 302 15 3 470 4 435 1.63e-21 97.4
MS.gene47728.t1 AT2G22590 27.158 475 276 20 3 448 13 446 2.97e-21 96.7
MS.gene47728.t1 AT4G09500 29.756 205 124 4 267 470 225 410 1.08e-19 91.7
MS.gene47728.t1 AT4G34135 26.426 333 204 12 2 306 8 327 2.35e-19 89.4

Find 139 sgRNAs with CRISPR-Local

Find 161 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGAAATTGCGTTGGATTAT+AGG 0.154357 5.3:+72983046 MS.gene47728:CDS
ATCAACGGTGCCCTTGGTTT+TGG 0.188973 5.3:-72982578 None:intergenic
TTTCCTCTGCTTCGGGAGTA+TGG 0.212424 5.3:+72982651 MS.gene47728:CDS
GGGTCTTCTTACGCTTATTT+AGG 0.232646 5.3:+72983213 MS.gene47728:CDS
AATCGTTTATGATGGGTTAT+TGG 0.258206 5.3:+72982416 MS.gene47728:CDS
GTACTTGAGAGCATTTATTT+TGG 0.271763 5.3:+72982943 MS.gene47728:CDS
TGGCTGGGTGGGCTAGTATT+TGG 0.275320 5.3:-72982885 None:intergenic
CGAAATTGCGTTGGATTATA+GGG 0.280259 5.3:+72983047 MS.gene47728:CDS
GATTATAGGGCGGAGTTTAA+TGG 0.283292 5.3:+72983060 MS.gene47728:CDS
TTTGGGTTCCAGGTTCAGTA+TGG 0.283478 5.3:-72982560 None:intergenic
TATTCCTCTCTCAATCTTAT+CGG 0.302069 5.3:-72983106 None:intergenic
ATTGGTGTGTGAGTTGAAAA+TGG 0.306684 5.3:+72983020 MS.gene47728:CDS
GGGCTAGTATTTGGACTTGT+GGG 0.316245 5.3:-72982876 None:intergenic
ACACTTGTCTTCTTCACTTC+CGG 0.334459 5.3:+72982232 MS.gene47728:CDS
TAAAGCCATCAGCATTCTTT+AGG 0.341894 5.3:-72982444 None:intergenic
CTCACTACCAGATCAGAAAA+TGG 0.344871 5.3:+72982136 MS.gene47728:CDS
ATAAGATTGAGAGAGGAATA+AGG 0.350503 5.3:+72983109 MS.gene47728:CDS
GAGGAACCTGAATCAGTGTT+TGG 0.368735 5.3:-72982058 None:intergenic
ACTTCCGGTGTTGCGTTCCT+TGG 0.377556 5.3:+72982247 MS.gene47728:CDS
TTACGCTTATTTAGGTCGTT+TGG 0.383098 5.3:+72983221 MS.gene47728:CDS
AGGAACCTGAATCAGTGTTT+GGG 0.391955 5.3:-72982057 None:intergenic
TCGGCTGTTACAAGATAGTT+AGG 0.401827 5.3:-72983087 None:intergenic
TCATCTGATCCTGGTCTAGC+TGG 0.408828 5.3:+72982514 MS.gene47728:CDS
ATAGTGGGGCCCGGTTTATA+TGG 0.416113 5.3:+72982722 MS.gene47728:CDS
TTCTTTGCTTAGCACAGCAC+TGG 0.419779 5.3:-72982389 None:intergenic
AATAAGGAGTGTGTTGGATA+AGG 0.419886 5.3:+72983125 MS.gene47728:CDS
GATACGGCTTGTTTGACGTT+TGG 0.420004 5.3:-72982109 None:intergenic
GGGTTCTTTCGATGAGGATC+AGG 0.421963 5.3:+72982672 MS.gene47728:CDS
CACTCTATTTCATCTGATCC+TGG 0.430551 5.3:+72982505 MS.gene47728:CDS
TGTCCCGAGTTTCGCTAACT+TGG 0.434675 5.3:+72982348 MS.gene47728:CDS
ATGGGTCCTATCGGATATAT+AGG 0.435975 5.3:-72982541 None:intergenic
TGTAGGGACGGAGAACTCTT+TGG 0.437195 5.3:-72982212 None:intergenic
TACGAAGAGACCATATAAAC+CGG 0.447493 5.3:-72982732 None:intergenic
AGTAAGAAAACATTGTTAGA+AGG 0.447750 5.3:+72983189 MS.gene47728:CDS
AGAATGGGAATCGTTTATGA+TGG 0.452545 5.3:+72982408 MS.gene47728:CDS
TTCCTCTGCTTCGGGAGTAT+GGG 0.453583 5.3:+72982652 MS.gene47728:CDS
GGCGCGGCCATGGTGCCCTC+TGG 0.455189 5.3:-72982763 None:intergenic
AGATGACCCGCAGCCGGAAA+AGG 0.455686 5.3:-72981866 None:intergenic
GCACGCGCTATTGAGAATAG+TGG 0.456491 5.3:+72982706 MS.gene47728:CDS
AGGAGTGTGTTGGATAAGGA+TGG 0.460546 5.3:+72983129 MS.gene47728:CDS
TGCTGTGCTAAGCAAAGAAT+GGG 0.464239 5.3:+72982393 MS.gene47728:CDS
ATCGGAATCAACGGTGCCCT+TGG 0.465618 5.3:-72982584 None:intergenic
TTGGGTTCCAGGTTCAGTAT+GGG 0.471611 5.3:-72982559 None:intergenic
TCCTATCTCCGATTCACTCC+AGG 0.475342 5.3:+72982006 MS.gene47728:CDS
GCGGCCATGGTGCCCTCTGG+TGG 0.475512 5.3:-72982760 None:intergenic
GAAGCAAATCCTCCAATGGC+TGG 0.476354 5.3:-72982901 None:intergenic
AGCGGACAGCAGAGATTGGA+AGG 0.480370 5.3:+72982839 MS.gene47728:CDS
TAAAGCGGCCATGTGGCTAT+AGG 0.480437 5.3:-72982970 None:intergenic
TGGGCTAGTATTTGGACTTG+TGG 0.482074 5.3:-72982877 None:intergenic
TTAGAGCGGACAGCAGAGAT+TGG 0.485077 5.3:+72982835 MS.gene47728:CDS
AACTAAGTTGTTACAACTCA+CGG 0.485577 5.3:+72982318 MS.gene47728:CDS
GCCATGGTGCCCTCTGGTGG+AGG 0.487632 5.3:-72982757 None:intergenic
GAGAGGAATAAGGAGTGTGT+TGG 0.494443 5.3:+72983119 MS.gene47728:CDS
GTGCTGTGCTAAGCAAAGAA+TGG 0.495094 5.3:+72982392 MS.gene47728:CDS
ATACTAGCCCACCCAGCCAT+TGG 0.505157 5.3:+72982889 MS.gene47728:CDS
GATTTGCTTCGCATTGTGGT+TGG 0.505761 5.3:+72982914 MS.gene47728:CDS
ACCTGGAGTGAATCGGAGAT+AGG 0.505865 5.3:-72982007 None:intergenic
GATGACCCGCAGCCGGAAAA+GGG 0.507089 5.3:-72981865 None:intergenic
GTTGTTACAACTCACGGACT+TGG 0.511420 5.3:+72982324 MS.gene47728:CDS
CACGCGCTATTGAGAATAGT+GGG 0.511450 5.3:+72982707 MS.gene47728:CDS
GCAGAGATTGGAAGGGTCGT+TGG 0.512102 5.3:+72982847 MS.gene47728:CDS
TTTATGATGGGTTATTGGAA+AGG 0.518347 5.3:+72982421 MS.gene47728:CDS
GTAATCAGAGGGCGCGGCCA+TGG 0.518576 5.3:-72982773 None:intergenic
GTTGATGACCTGGAGTGAAT+CGG 0.518934 5.3:-72982014 None:intergenic
TGGATAAGGATGGAGATGTA+AGG 0.521344 5.3:+72983139 MS.gene47728:CDS
AGATTGGAAGGGTCGTTGGA+TGG 0.526468 5.3:+72982851 MS.gene47728:CDS
AAAGATGAAAACTTAAACCA+AGG 0.527264 5.3:-72982264 None:intergenic
TTAGAAGCTTCGCGAACTCA+AGG 0.528827 5.3:-72981898 None:intergenic
AAGAAAACATTGTTAGAAGG+TGG 0.530165 5.3:+72983192 MS.gene47728:CDS
GGAGTGAATCGGAGATAGGA+AGG 0.531727 5.3:-72982003 None:intergenic
AATGGGAGTCGAAATTGCGT+TGG 0.531788 5.3:+72983038 MS.gene47728:CDS
AGCTTCGACTAGCGCAGTCA+TGG 0.532393 5.3:-72982080 None:intergenic
GGAACCAAGTTAGCGAAACT+CGG 0.533431 5.3:-72982352 None:intergenic
GATTGGAAGGGTCGTTGGAT+GGG 0.536023 5.3:+72982852 MS.gene47728:CDS
GAATGGGAATCGTTTATGAT+GGG 0.538709 5.3:+72982409 MS.gene47728:CDS
GTCTGTTGTTCTGCATAAAG+CGG 0.547309 5.3:-72982985 None:intergenic
GATAGGACCCATACTGAACC+TGG 0.547761 5.3:+72982552 MS.gene47728:CDS
TTGGTGTGTGAGTTGAAAAT+GGG 0.548699 5.3:+72983021 MS.gene47728:CDS
CAAGATGAAGAAAGCAGAAG+TGG 0.555837 5.3:+72981835 None:intergenic
AAATCCTCCAATGGCTGGGT+GGG 0.560743 5.3:-72982896 None:intergenic
CTAGCCCACCCAGCCATTGG+AGG 0.561551 5.3:+72982892 MS.gene47728:CDS
AGCGTAGACATCGGTTTCTG+TGG 0.564626 5.3:-72981975 None:intergenic
GAAACTAGATGACCCGCAGC+CGG 0.568902 5.3:-72981872 None:intergenic
GAAGTGAAGAAGACAAGTGT+AGG 0.569181 5.3:-72982229 None:intergenic
ACATCGGTTTCTGTGGTGTG+TGG 0.569627 5.3:-72981968 None:intergenic
GGCTAGTATTTGGACTTGTG+GGG 0.572847 5.3:-72982875 None:intergenic
AGAAAACATTGTTAGAAGGT+GGG 0.577699 5.3:+72983193 MS.gene47728:CDS
TAAACCAAGGAACGCAACAC+CGG 0.579202 5.3:-72982251 None:intergenic
AAGCAAATCCTCCAATGGCT+GGG 0.580166 5.3:-72982900 None:intergenic
TGAAATAGAGTGAACTGCAT+GGG 0.582502 5.3:-72982494 None:intergenic
AGGTTCAGTATGGGTCCTAT+CGG 0.583742 5.3:-72982550 None:intergenic
ATTCTGGAAGGTTGATGACC+TGG 0.584402 5.3:-72982024 None:intergenic
CAAATCCTCCAATGGCTGGG+TGG 0.585110 5.3:-72982897 None:intergenic
GAAGAAGACAAGTGTAGGGA+CGG 0.585947 5.3:-72982224 None:intergenic
CTATTGAGAATAGTGGGGCC+CGG 0.586704 5.3:+72982713 MS.gene47728:CDS
AACCCATACTCCCGAAGCAG+AGG 0.589515 5.3:-72982654 None:intergenic
CAGAGGAAAACTACTGAGGA+AGG 0.589925 5.3:-72982637 None:intergenic
AAGCCACTTGATGATGTCAT+CGG 0.592954 5.3:-72982602 None:intergenic
TCTGGTAGTGAGGTTAGATA+CGG 0.594098 5.3:-72982125 None:intergenic
TCTTTGCTTAGCACAGCACT+GGG 0.594965 5.3:-72982388 None:intergenic
GATGATGTCATCGGAATCAA+CGG 0.595845 5.3:-72982593 None:intergenic
GGAGGATTTGCTTCGCATTG+TGG 0.597768 5.3:+72982910 MS.gene47728:CDS
CATCGGTTTCTGTGGTGTGT+GGG 0.597782 5.3:-72981967 None:intergenic
ATGCGAAGCAAATCCTCCAA+TGG 0.612858 5.3:-72982905 None:intergenic
TAGAAGCTTCGCGAACTCAA+GGG 0.614878 5.3:-72981897 None:intergenic
AAGAGGGTAATCAGAGGGCG+CGG 0.615621 5.3:-72982779 None:intergenic
GAACCAAGTTAGCGAAACTC+GGG 0.615668 5.3:-72982351 None:intergenic
GGGGAAGAGAACATTCTGGA+AGG 0.616011 5.3:-72982036 None:intergenic
TTGGGTTCAAGTTTACCCGA+AGG 0.616281 5.3:+72982808 MS.gene47728:CDS
AAGTGAAGAAGACAAGTGTA+GGG 0.617160 5.3:-72982228 None:intergenic
ATGAAATAGAGTGAACTGCA+TGG 0.617380 5.3:-72982495 None:intergenic
ATAGGTAAACCAGCTAGACC+AGG 0.621690 5.3:-72982523 None:intergenic
TGATAACTAAAACAGTTACT+CGG 0.623393 5.3:-72981940 None:intergenic
ACCTCCACCAGAGGGCACCA+TGG 0.624215 5.3:+72982756 MS.gene47728:CDS
GAGTATGGGTTCTTTCGATG+AGG 0.625280 5.3:+72982666 MS.gene47728:CDS
ATTCCGATGACATCATCAAG+TGG 0.626801 5.3:+72982599 MS.gene47728:CDS
GAACATGTCAACAACAAAAG+CGG 0.630805 5.3:-72982167 None:intergenic
AAAGGCCTAAAGAATGCTGA+TGG 0.634071 5.3:+72982439 MS.gene47728:CDS
TCTTCGTAAACCTCCACCAG+AGG 0.637133 5.3:+72982747 MS.gene47728:CDS
GGTTTACCTATATATCCGAT+AGG 0.640240 5.3:+72982535 MS.gene47728:CDS
GCGGACAGCAGAGATTGGAA+GGG 0.645368 5.3:+72982840 MS.gene47728:CDS
AACCTGGAACCCAAAACCAA+GGG 0.647309 5.3:+72982568 MS.gene47728:CDS
AAGGGATTTAGCGTAGACAT+CGG 0.653091 5.3:-72981984 None:intergenic
GAACCTGGAACCCAAAACCA+AGG 0.654337 5.3:+72982567 MS.gene47728:CDS
GGAACCTGAATCAGTGTTTG+GGG 0.654898 5.3:-72982056 None:intergenic
TTCTGCATAAAGCGGCCATG+TGG 0.655565 5.3:-72982977 None:intergenic
ACAGCCGATAAGATTGAGAG+AGG 0.655724 5.3:+72983102 MS.gene47728:CDS
GAGTGAATCGGAGATAGGAA+GGG 0.656963 5.3:-72982002 None:intergenic
CTTCGTAAACCTCCACCAGA+GGG 0.665923 5.3:+72982748 MS.gene47728:CDS
ACGAAGAGACCATATAAACC+GGG 0.667971 5.3:-72982731 None:intergenic
TGTCAACAACAAAAGCGGCA+AGG 0.676346 5.3:-72982162 None:intergenic
TTGGTGTGCCTATAGCCACA+TGG 0.677910 5.3:+72982962 MS.gene47728:CDS
AGGAAAACTACTGAGGAAGG+AGG 0.682327 5.3:-72982634 None:intergenic
GAAGCAGAGGAAAACTACTG+AGG 0.695038 5.3:-72982641 None:intergenic
AATTGCGTTGGATTATAGGG+CGG 0.699009 5.3:+72983050 MS.gene47728:CDS
TTCGACTAGCGCAGTCATGG+AGG 0.704839 5.3:-72982077 None:intergenic
TTACTCGGAGACGATTATCA+CGG 0.713867 5.3:-72981925 None:intergenic
ACGCGCTATTGAGAATAGTG+GGG 0.735104 5.3:+72982708 MS.gene47728:CDS
GAACCTGAATCAGTGTTTGG+GGG 0.772719 5.3:-72982055 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAAGATGAAAACTTAAACCA+AGG - chr5.3:72982267-72982286 None:intergenic 25.0%
! AGTAAGAAAACATTGTTAGA+AGG + chr5.3:72983189-72983208 MS.gene47728:CDS 25.0%
! TGATAACTAAAACAGTTACT+CGG - chr5.3:72981943-72981962 None:intergenic 25.0%
!!! GGTTGATTATATTTTGAATC+AGG + chr5.3:72983242-72983261 MS.gene47728:CDS 25.0%
AACTAAGTTGTTACAACTCA+CGG + chr5.3:72982318-72982337 MS.gene47728:CDS 30.0%
AAGAAAACATTGTTAGAAGG+TGG + chr5.3:72983192-72983211 MS.gene47728:CDS 30.0%
AGAAAACATTGTTAGAAGGT+GGG + chr5.3:72983193-72983212 MS.gene47728:CDS 30.0%
ATAAGATTGAGAGAGGAATA+AGG + chr5.3:72983109-72983128 MS.gene47728:CDS 30.0%
TATTCCTCTCTCAATCTTAT+CGG - chr5.3:72983109-72983128 None:intergenic 30.0%
TTGAACCCAAATCAAAAAGA+GGG - chr5.3:72982798-72982817 None:intergenic 30.0%
! ACAGACTAATGCTTTTGAAT+TGG + chr5.3:72983002-72983021 MS.gene47728:CDS 30.0%
!! AATCGTTTATGATGGGTTAT+TGG + chr5.3:72982416-72982435 MS.gene47728:CDS 30.0%
!! TGATTACCCTCTTTTTGATT+TGG + chr5.3:72982789-72982808 MS.gene47728:CDS 30.0%
!! TTTATGATGGGTTATTGGAA+AGG + chr5.3:72982421-72982440 MS.gene47728:CDS 30.0%
!!! GATTACCCTCTTTTTGATTT+GGG + chr5.3:72982790-72982809 MS.gene47728:CDS 30.0%
!!! GTACTTGAGAGCATTTATTT+TGG + chr5.3:72982943-72982962 MS.gene47728:CDS 30.0%
AAGTGAAGAAGACAAGTGTA+GGG - chr5.3:72982231-72982250 None:intergenic 35.0%
AGAATGGGAATCGTTTATGA+TGG + chr5.3:72982408-72982427 MS.gene47728:CDS 35.0%
ATCAAAAAGAGGGTAATCAG+AGG - chr5.3:72982788-72982807 None:intergenic 35.0%
ATGAAATAGAGTGAACTGCA+TGG - chr5.3:72982498-72982517 None:intergenic 35.0%
CGAAATTGCGTTGGATTATA+GGG + chr5.3:72983047-72983066 MS.gene47728:CDS 35.0%
CTTGAACCCAAATCAAAAAG+AGG - chr5.3:72982799-72982818 None:intergenic 35.0%
GAACATGTCAACAACAAAAG+CGG - chr5.3:72982170-72982189 None:intergenic 35.0%
GAATGGGAATCGTTTATGAT+GGG + chr5.3:72982409-72982428 MS.gene47728:CDS 35.0%
GGTTTACCTATATATCCGAT+AGG + chr5.3:72982535-72982554 MS.gene47728:CDS 35.0%
TAAAGCCATCAGCATTCTTT+AGG - chr5.3:72982447-72982466 None:intergenic 35.0%
TACGAAGAGACCATATAAAC+CGG - chr5.3:72982735-72982754 None:intergenic 35.0%
TCAAAAAGAGGGTAATCAGA+GGG - chr5.3:72982787-72982806 None:intergenic 35.0%
TCGAAATTGCGTTGGATTAT+AGG + chr5.3:72983046-72983065 MS.gene47728:CDS 35.0%
TGAAATAGAGTGAACTGCAT+GGG - chr5.3:72982497-72982516 None:intergenic 35.0%
TTACGCTTATTTAGGTCGTT+TGG + chr5.3:72983221-72983240 MS.gene47728:CDS 35.0%
! AATAAGGAGTGTGTTGGATA+AGG + chr5.3:72983125-72983144 MS.gene47728:CDS 35.0%
! ATTGGTGTGTGAGTTGAAAA+TGG + chr5.3:72983020-72983039 MS.gene47728:CDS 35.0%
! TTGGTGTGTGAGTTGAAAAT+GGG + chr5.3:72983021-72983040 MS.gene47728:CDS 35.0%
AAAGGCCTAAAGAATGCTGA+TGG + chr5.3:72982439-72982458 MS.gene47728:CDS 40.0%
AAGGGATTTAGCGTAGACAT+CGG - chr5.3:72981987-72982006 None:intergenic 40.0%
AATTGCGTTGGATTATAGGG+CGG + chr5.3:72983050-72983069 MS.gene47728:CDS 40.0%
ACACTTGTCTTCTTCACTTC+CGG + chr5.3:72982232-72982251 MS.gene47728:CDS 40.0%
ACGAAGAGACCATATAAACC+GGG - chr5.3:72982734-72982753 None:intergenic 40.0%
AGGAACCTGAATCAGTGTTT+GGG - chr5.3:72982060-72982079 None:intergenic 40.0%
ATGGGTCCTATCGGATATAT+AGG - chr5.3:72982544-72982563 None:intergenic 40.0%
ATTCCGATGACATCATCAAG+TGG + chr5.3:72982599-72982618 MS.gene47728:CDS 40.0%
CACTCTATTTCATCTGATCC+TGG + chr5.3:72982505-72982524 MS.gene47728:CDS 40.0%
CTCACTACCAGATCAGAAAA+TGG + chr5.3:72982136-72982155 MS.gene47728:CDS 40.0%
GAAGTGAAGAAGACAAGTGT+AGG - chr5.3:72982232-72982251 None:intergenic 40.0%
GATGATGTCATCGGAATCAA+CGG - chr5.3:72982596-72982615 None:intergenic 40.0%
GATTATAGGGCGGAGTTTAA+TGG + chr5.3:72983060-72983079 MS.gene47728:CDS 40.0%
GGGTCTTCTTACGCTTATTT+AGG + chr5.3:72983213-72983232 MS.gene47728:CDS 40.0%
GTCTGTTGTTCTGCATAAAG+CGG - chr5.3:72982988-72983007 None:intergenic 40.0%
TCGGCTGTTACAAGATAGTT+AGG - chr5.3:72983090-72983109 None:intergenic 40.0%
TGCTGTGCTAAGCAAAGAAT+GGG + chr5.3:72982393-72982412 MS.gene47728:CDS 40.0%
TGGATAAGGATGGAGATGTA+AGG + chr5.3:72983139-72983158 MS.gene47728:CDS 40.0%
TTACTCGGAGACGATTATCA+CGG - chr5.3:72981928-72981947 None:intergenic 40.0%
! AAGGACTCCATTTTCTGATC+TGG - chr5.3:72982146-72982165 None:intergenic 40.0%
! TCAGTAGTTTTCCTCTGCTT+CGG + chr5.3:72982643-72982662 MS.gene47728:CDS 40.0%
! TCTGGTAGTGAGGTTAGATA+CGG - chr5.3:72982128-72982147 None:intergenic 40.0%
!! AAGCCACTTGATGATGTCAT+CGG - chr5.3:72982605-72982624 None:intergenic 40.0%
!! CATTTTCTGATCTGGTAGTG+AGG - chr5.3:72982138-72982157 None:intergenic 40.0%
!! TACCCGAAGGATTTTTAGAG+CGG + chr5.3:72982821-72982840 MS.gene47728:CDS 40.0%
!! TGTCCGCTCTAAAAATCCTT+CGG - chr5.3:72982827-72982846 None:intergenic 40.0%
AACCTGGAACCCAAAACCAA+GGG + chr5.3:72982568-72982587 MS.gene47728:CDS 45.0%
AAGCAAATCCTCCAATGGCT+GGG - chr5.3:72982903-72982922 None:intergenic 45.0%
AATGGGAGTCGAAATTGCGT+TGG + chr5.3:72983038-72983057 MS.gene47728:CDS 45.0%
ACAGCCGATAAGATTGAGAG+AGG + chr5.3:72983102-72983121 MS.gene47728:CDS 45.0%
ACGCGCTATTGAGAATAGTG+GGG + chr5.3:72982708-72982727 MS.gene47728:CDS 45.0%
AGGAAAACTACTGAGGAAGG+AGG - chr5.3:72982637-72982656 None:intergenic 45.0%
AGGTTCAGTATGGGTCCTAT+CGG - chr5.3:72982553-72982572 None:intergenic 45.0%
ATAGGTAAACCAGCTAGACC+AGG - chr5.3:72982526-72982545 None:intergenic 45.0%
ATGCGAAGCAAATCCTCCAA+TGG - chr5.3:72982908-72982927 None:intergenic 45.0%
CACGCGCTATTGAGAATAGT+GGG + chr5.3:72982707-72982726 MS.gene47728:CDS 45.0%
CAGAGGAAAACTACTGAGGA+AGG - chr5.3:72982640-72982659 None:intergenic 45.0%
GAACCAAGTTAGCGAAACTC+GGG - chr5.3:72982354-72982373 None:intergenic 45.0%
GAACCTGAATCAGTGTTTGG+GGG - chr5.3:72982058-72982077 None:intergenic 45.0%
GAAGAAGACAAGTGTAGGGA+CGG - chr5.3:72982227-72982246 None:intergenic 45.0%
GAAGCAGAGGAAAACTACTG+AGG - chr5.3:72982644-72982663 None:intergenic 45.0%
GAGGAACCTGAATCAGTGTT+TGG - chr5.3:72982061-72982080 None:intergenic 45.0%
GAGTATGGGTTCTTTCGATG+AGG + chr5.3:72982666-72982685 MS.gene47728:CDS 45.0%
GAGTGAATCGGAGATAGGAA+GGG - chr5.3:72982005-72982024 None:intergenic 45.0%
GGAACCAAGTTAGCGAAACT+CGG - chr5.3:72982355-72982374 None:intergenic 45.0%
GGAACCTGAATCAGTGTTTG+GGG - chr5.3:72982059-72982078 None:intergenic 45.0%
GGCTAGTATTTGGACTTGTG+GGG - chr5.3:72982878-72982897 None:intergenic 45.0%
GTGCTGTGCTAAGCAAAGAA+TGG + chr5.3:72982392-72982411 MS.gene47728:CDS 45.0%
GTTGTTACAACTCACGGACT+TGG + chr5.3:72982324-72982343 MS.gene47728:CDS 45.0%
TAAACCAAGGAACGCAACAC+CGG - chr5.3:72982254-72982273 None:intergenic 45.0%
TAGAAGCTTCGCGAACTCAA+GGG - chr5.3:72981900-72981919 None:intergenic 45.0%
TCTTTGCTTAGCACAGCACT+GGG - chr5.3:72982391-72982410 None:intergenic 45.0%
TGTCAACAACAAAAGCGGCA+AGG - chr5.3:72982165-72982184 None:intergenic 45.0%
TTAGAAGCTTCGCGAACTCA+AGG - chr5.3:72981901-72981920 None:intergenic 45.0%
TTCTTTGCTTAGCACAGCAC+TGG - chr5.3:72982392-72982411 None:intergenic 45.0%
TTGGGTTCCAGGTTCAGTAT+GGG - chr5.3:72982562-72982581 None:intergenic 45.0%
TTTGGGGGAAGAGAACATTC+TGG - chr5.3:72982043-72982062 None:intergenic 45.0%
! AGGAGTGTGTTGGATAAGGA+TGG + chr5.3:72983129-72983148 MS.gene47728:CDS 45.0%
! AGTGGTGTTTGTCCCTTTTC+CGG + chr5.3:72981853-72981872 MS.gene47728:CDS 45.0%
! CAGTAGTTTTCCTCTGCTTC+GGG + chr5.3:72982644-72982663 MS.gene47728:CDS 45.0%
! GAGAGGAATAAGGAGTGTGT+TGG + chr5.3:72983119-72983138 MS.gene47728:CDS 45.0%
! GATACGGCTTGTTTGACGTT+TGG - chr5.3:72982112-72982131 None:intergenic 45.0%
! GATTTGCTTCGCATTGTGGT+TGG + chr5.3:72982914-72982933 MS.gene47728:CDS 45.0%
! GGGCTAGTATTTGGACTTGT+GGG - chr5.3:72982879-72982898 None:intergenic 45.0%
! TTGGGTTCAAGTTTACCCGA+AGG + chr5.3:72982808-72982827 MS.gene47728:CDS 45.0%
! TTTGGGTTCCAGGTTCAGTA+TGG - chr5.3:72982563-72982582 None:intergenic 45.0%
!! ATTCTGGAAGGTTGATGACC+TGG - chr5.3:72982027-72982046 None:intergenic 45.0%
!! GTCCGCTCTAAAAATCCTTC+GGG - chr5.3:72982826-72982845 None:intergenic 45.0%
!! GTTGATGACCTGGAGTGAAT+CGG - chr5.3:72982017-72982036 None:intergenic 45.0%
!! TGGGCTAGTATTTGGACTTG+TGG - chr5.3:72982880-72982899 None:intergenic 45.0%
AAATCCTCCAATGGCTGGGT+GGG - chr5.3:72982899-72982918 None:intergenic 50.0%
ACCTGGAGTGAATCGGAGAT+AGG - chr5.3:72982010-72982029 None:intergenic 50.0%
AGATTGGAAGGGTCGTTGGA+TGG + chr5.3:72982851-72982870 MS.gene47728:CDS 50.0%
CTTCGTAAACCTCCACCAGA+GGG + chr5.3:72982748-72982767 MS.gene47728:CDS 50.0%
GAACCTGGAACCCAAAACCA+AGG + chr5.3:72982567-72982586 MS.gene47728:CDS 50.0%
GAAGCAAATCCTCCAATGGC+TGG - chr5.3:72982904-72982923 None:intergenic 50.0%
GATAGGACCCATACTGAACC+TGG + chr5.3:72982552-72982571 MS.gene47728:CDS 50.0%
GATTGGAAGGGTCGTTGGAT+GGG + chr5.3:72982852-72982871 MS.gene47728:CDS 50.0%
GCACGCGCTATTGAGAATAG+TGG + chr5.3:72982706-72982725 MS.gene47728:CDS 50.0%
GGAGTGAATCGGAGATAGGA+AGG - chr5.3:72982006-72982025 None:intergenic 50.0%
GGGGAAGAGAACATTCTGGA+AGG - chr5.3:72982039-72982058 None:intergenic 50.0%
GGGTTCTTTCGATGAGGATC+AGG + chr5.3:72982672-72982691 MS.gene47728:CDS 50.0%
TAAAGCGGCCATGTGGCTAT+AGG - chr5.3:72982973-72982992 None:intergenic 50.0%
TCATCTGATCCTGGTCTAGC+TGG + chr5.3:72982514-72982533 MS.gene47728:CDS 50.0%
TCCTATCTCCGATTCACTCC+AGG + chr5.3:72982006-72982025 MS.gene47728:CDS 50.0%
TCTTCGTAAACCTCCACCAG+AGG + chr5.3:72982747-72982766 MS.gene47728:CDS 50.0%
TGTAGGGACGGAGAACTCTT+TGG - chr5.3:72982215-72982234 None:intergenic 50.0%
TGTCCCGAGTTTCGCTAACT+TGG + chr5.3:72982348-72982367 MS.gene47728:CDS 50.0%
TTAGAGCGGACAGCAGAGAT+TGG + chr5.3:72982835-72982854 MS.gene47728:CDS 50.0%
TTCTGCATAAAGCGGCCATG+TGG - chr5.3:72982980-72982999 None:intergenic 50.0%
TTGGTGTGCCTATAGCCACA+TGG + chr5.3:72982962-72982981 MS.gene47728:CDS 50.0%
TTTCCTCTGCTTCGGGAGTA+TGG + chr5.3:72982651-72982670 MS.gene47728:CDS 50.0%
! ATAGTGGGGCCCGGTTTATA+TGG + chr5.3:72982722-72982741 MS.gene47728:CDS 50.0%
! ATCAACGGTGCCCTTGGTTT+TGG - chr5.3:72982581-72982600 None:intergenic 50.0%
! CTATTGAGAATAGTGGGGCC+CGG + chr5.3:72982713-72982732 MS.gene47728:CDS 50.0%
! GGAGGATTTGCTTCGCATTG+TGG + chr5.3:72982910-72982929 MS.gene47728:CDS 50.0%
! TTCCTCTGCTTCGGGAGTAT+GGG + chr5.3:72982652-72982671 MS.gene47728:CDS 50.0%
!! ACATCGGTTTCTGTGGTGTG+TGG - chr5.3:72981971-72981990 None:intergenic 50.0%
!! AGCGTAGACATCGGTTTCTG+TGG - chr5.3:72981978-72981997 None:intergenic 50.0%
!! CATCGGTTTCTGTGGTGTGT+GGG - chr5.3:72981970-72981989 None:intergenic 50.0%
!! CTTCCCCCAAACACTGATTC+AGG + chr5.3:72982052-72982071 MS.gene47728:CDS 50.0%
!! TCAACGGTGCCCTTGGTTTT+GGG - chr5.3:72982580-72982599 None:intergenic 50.0%
AACCCATACTCCCGAAGCAG+AGG - chr5.3:72982657-72982676 None:intergenic 55.0%
AAGAGGGTAATCAGAGGGCG+CGG - chr5.3:72982782-72982801 None:intergenic 55.0%
AGCGGACAGCAGAGATTGGA+AGG + chr5.3:72982839-72982858 MS.gene47728:CDS 55.0%
AGCTTCGACTAGCGCAGTCA+TGG - chr5.3:72982083-72982102 None:intergenic 55.0%
ATACTAGCCCACCCAGCCAT+TGG + chr5.3:72982889-72982908 MS.gene47728:CDS 55.0%
ATCGGAATCAACGGTGCCCT+TGG - chr5.3:72982587-72982606 None:intergenic 55.0%
CAAATCCTCCAATGGCTGGG+TGG - chr5.3:72982900-72982919 None:intergenic 55.0%
GAAACTAGATGACCCGCAGC+CGG - chr5.3:72981875-72981894 None:intergenic 55.0%
GCAGAGATTGGAAGGGTCGT+TGG + chr5.3:72982847-72982866 MS.gene47728:CDS 55.0%
GCGGACAGCAGAGATTGGAA+GGG + chr5.3:72982840-72982859 MS.gene47728:CDS 55.0%
TTCGACTAGCGCAGTCATGG+AGG - chr5.3:72982080-72982099 None:intergenic 55.0%
! GCACTGGGCAACGCTTTTGA+TGG - chr5.3:72982376-72982395 None:intergenic 55.0%
! GTTTGTCCCTTTTCCGGCTG+CGG + chr5.3:72981859-72981878 MS.gene47728:CDS 55.0%
! TTTGTCCCTTTTCCGGCTGC+GGG + chr5.3:72981860-72981879 MS.gene47728:CDS 55.0%
!! ACTTCCGGTGTTGCGTTCCT+TGG + chr5.3:72982247-72982266 MS.gene47728:CDS 55.0%
!! TGGCTGGGTGGGCTAGTATT+TGG - chr5.3:72982888-72982907 None:intergenic 55.0%
!!! TGCCCTTGGTTTTGGGTTCC+AGG - chr5.3:72982573-72982592 None:intergenic 55.0%
AGATGACCCGCAGCCGGAAA+AGG - chr5.3:72981869-72981888 None:intergenic 60.0%
GATGACCCGCAGCCGGAAAA+GGG - chr5.3:72981868-72981887 None:intergenic 60.0%
CTAGCCCACCCAGCCATTGG+AGG + chr5.3:72982892-72982911 MS.gene47728:CDS 65.0%
! GTAATCAGAGGGCGCGGCCA+TGG - chr5.3:72982776-72982795 None:intergenic 65.0%
!! ACCTCCACCAGAGGGCACCA+TGG + chr5.3:72982756-72982775 MS.gene47728:CDS 65.0%
GCCATGGTGCCCTCTGGTGG+AGG - chr5.3:72982760-72982779 None:intergenic 70.0%
GCGGCCATGGTGCCCTCTGG+TGG - chr5.3:72982763-72982782 None:intergenic 75.0%
! GGCGCGGCCATGGTGCCCTC+TGG - chr5.3:72982766-72982785 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 72981839 72983269 72981839 ID=MS.gene47728
chr5.3 mRNA 72981839 72983269 72981839 ID=MS.gene47728.t1;Parent=MS.gene47728
chr5.3 exon 72981839 72983269 72981839 ID=MS.gene47728.t1.exon1;Parent=MS.gene47728.t1
chr5.3 CDS 72981839 72983269 72981839 ID=cds.MS.gene47728.t1;Parent=MS.gene47728.t1
Gene Sequence

>MS.gene47728

ATGAAGAAAGCAGAAGTGGTGTTTGTCCCTTTTCCGGCTGCGGGTCATCTAGTTTCTGCCCTTGAGTTCGCGAAGCTTCTAATCAACCGTGATAATCGTCTCCGAGTAACTGTTTTAGTTATCAAATTCCCACACACCACAGAAACCGATGTCTACGCTAAATCCCTTCCTATCTCCGATTCACTCCAGGTCATCAACCTTCCAGAATGTTCTCTTCCCCCAAACACTGATTCAGGTTCCTCCATGACTGCGCTAGTCGAAGCTCAGAAACCAAACGTCAAACAAGCCGTATCTAACCTCACTACCAGATCAGAAAATGGAGTCCTTGCCGCTTTTGTTGTTGACATGTTCTGCACAAACATGATTGATGTTGCCAAAGAGTTCTCCGTCCCTACACTTGTCTTCTTCACTTCCGGTGTTGCGTTCCTTGGTTTAAGTTTTCATCTTTACGCTATTCGTCAACGAGATAATGTCTATTCAACTAAGTTGTTACAACTCACGGACTTGGCTGTCCCGAGTTTCGCTAACTTGGTTCCATCAAAAGCGTTGCCCAGTGCTGTGCTAAGCAAAGAATGGGAATCGTTTATGATGGGTTATTGGAAAGGCCTAAAGAATGCTGATGGCTTTATAGTAAATTCATTTGAAGAGCTAGAATCCCATGCAGTTCACTCTATTTCATCTGATCCTGGTCTAGCTGGTTTACCTATATATCCGATAGGACCCATACTGAACCTGGAACCCAAAACCAAGGGCACCGTTGATTCCGATGACATCATCAAGTGGCTTGATGATCAACCTCCTTCCTCAGTAGTTTTCCTCTGCTTCGGGAGTATGGGTTCTTTCGATGAGGATCAGGTTAAGCAGATTGCACGCGCTATTGAGAATAGTGGGGCCCGGTTTATATGGTCTCTTCGTAAACCTCCACCAGAGGGCACCATGGCCGCGCCCTCTGATTACCCTCTTTTTGATTTGGGTTCAAGTTTACCCGAAGGATTTTTAGAGCGGACAGCAGAGATTGGAAGGGTCGTTGGATGGGCCCCACAAGTCCAAATACTAGCCCACCCAGCCATTGGAGGATTTGCTTCGCATTGTGGTTGGAATTCAGTACTTGAGAGCATTTATTTTGGTGTGCCTATAGCCACATGGCCGCTTTATGCAGAACAACAGACTAATGCTTTTGAATTGGTGTGTGAGTTGAAAATGGGAGTCGAAATTGCGTTGGATTATAGGGCGGAGTTTAATGGTGTGCCTAACTATCTTGTAACAGCCGATAAGATTGAGAGAGGAATAAGGAGTGTGTTGGATAAGGATGGAGATGTAAGGAAGAAAGTGAAAGAGATGAGTGAAAAAAGTAAGAAAACATTGTTAGAAGGTGGGTCTTCTTACGCTTATTTAGGTCGTTTGGTTGATTATATTTTGAATCAGGTATGA
Protein sequence

>MS.gene47728.t1

MKKAEVVFVPFPAAGHLVSALEFAKLLINRDNRLRVTVLVIKFPHTTETDVYAKSLPISDSLQVINLPECSLPPNTDSGSSMTALVEAQKPNVKQAVSNLTTRSENGVLAAFVVDMFCTNMIDVAKEFSVPTLVFFTSGVAFLGLSFHLYAIRQRDNVYSTKLLQLTDLAVPSFANLVPSKALPSAVLSKEWESFMMGYWKGLKNADGFIVNSFEELESHAVHSISSDPGLAGLPIYPIGPILNLEPKTKGTVDSDDIIKWLDDQPPSSVVFLCFGSMGSFDEDQVKQIARAIENSGARFIWSLRKPPPEGTMAAPSDYPLFDLGSSLPEGFLERTAEIGRVVGWAPQVQILAHPAIGGFASHCGWNSVLESIYFGVPIATWPLYAEQQTNAFELVCELKMGVEIALDYRAEFNGVPNYLVTADKIERGIRSVLDKDGDVRKKVKEMSEKSKKTLLEGGSSYAYLGRLVDYILNQV