Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44893.t1 | XP_003615624.1 | 84.7 | 170 | 19 | 2 | 1 | 170 | 1 | 163 | 1.70E-71 | 278.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44893.t1 | Q56Y11 | 66.7 | 99 | 33 | 0 | 72 | 170 | 64 | 162 | 1.6e-33 | 144.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44893.t1 | G7K6E4 | 84.7 | 170 | 19 | 2 | 1 | 170 | 1 | 163 | 1.2e-71 | 278.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049396 | MS.gene44893 | 0.810577 | 1.08E-50 | -1.69E-46 |
| MS.gene049757 | MS.gene44893 | 0.84087 | 6.70E-58 | -1.69E-46 |
| MS.gene050170 | MS.gene44893 | 0.85304 | 3.11E-61 | -1.69E-46 |
| MS.gene050323 | MS.gene44893 | 0.803797 | 2.94E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene44893 | 0.818449 | 1.95E-52 | -1.69E-46 |
| MS.gene050502 | MS.gene44893 | 0.870765 | 1.14E-66 | -1.69E-46 |
| MS.gene050553 | MS.gene44893 | 0.832425 | 9.52E-56 | -1.69E-46 |
| MS.gene050697 | MS.gene44893 | 0.856696 | 2.70E-62 | -1.69E-46 |
| MS.gene050868 | MS.gene44893 | 0.800283 | 1.55E-48 | -1.69E-46 |
| MS.gene050871 | MS.gene44893 | 0.803152 | 4.00E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene44893 | 0.812056 | 5.14E-51 | -1.69E-46 |
| MS.gene051941 | MS.gene44893 | 0.845446 | 4.04E-59 | -1.69E-46 |
| MS.gene052346 | MS.gene44893 | 0.862403 | 5.20E-64 | -1.69E-46 |
| MS.gene052414 | MS.gene44893 | 0.834312 | 3.22E-56 | -1.69E-46 |
| MS.gene053169 | MS.gene44893 | 0.806919 | 6.51E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene44893 | 0.802893 | 4.52E-49 | -1.69E-46 |
| MS.gene053889 | MS.gene44893 | 0.808362 | 3.21E-50 | -1.69E-46 |
| MS.gene054181 | MS.gene44893 | -0.802375 | 5.78E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene44893 | 0.806387 | 8.43E-50 | -1.69E-46 |
| MS.gene055158 | MS.gene44893 | -0.80107 | 1.07E-48 | -1.69E-46 |
| MS.gene055159 | MS.gene44893 | -0.810147 | 1.33E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene44893 | 0.864055 | 1.60E-64 | -1.69E-46 |
| MS.gene055744 | MS.gene44893 | 0.86032 | 2.24E-63 | -1.69E-46 |
| MS.gene05589 | MS.gene44893 | 0.811845 | 5.71E-51 | -1.69E-46 |
| MS.gene055909 | MS.gene44893 | 0.818911 | 1.53E-52 | -1.69E-46 |
| MS.gene055911 | MS.gene44893 | 0.818026 | 2.43E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene44893 | 0.809525 | 1.81E-50 | -1.69E-46 |
| MS.gene056346 | MS.gene44893 | 0.816696 | 4.84E-52 | -1.69E-46 |
| MS.gene056387 | MS.gene44893 | 0.820903 | 5.36E-53 | -1.69E-46 |
| MS.gene056514 | MS.gene44893 | 0.800065 | 1.72E-48 | -1.69E-46 |
| MS.gene056877 | MS.gene44893 | 0.812369 | 4.39E-51 | -1.69E-46 |
| MS.gene057019 | MS.gene44893 | 0.85772 | 1.35E-62 | -1.69E-46 |
| MS.gene057086 | MS.gene44893 | 0.832875 | 7.36E-56 | -1.69E-46 |
| MS.gene059517 | MS.gene44893 | 0.80015 | 1.65E-48 | -1.69E-46 |
| MS.gene059667 | MS.gene44893 | 0.80289 | 4.53E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene44893 | 0.838675 | 2.50E-57 | -1.69E-46 |
| MS.gene060372 | MS.gene44893 | 0.866149 | 3.52E-65 | -1.69E-46 |
| MS.gene060593 | MS.gene44893 | -0.814828 | 1.26E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene44893 | 0.819439 | 1.16E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene44893 | 0.809269 | 2.06E-50 | -1.69E-46 |
| MS.gene06097 | MS.gene44893 | 0.814026 | 1.90E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene44893 | 0.804849 | 1.77E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44893.t1 | MTR_5g070210 | 84.706 | 170 | 19 | 2 | 1 | 170 | 1 | 163 | 9.69e-102 | 295 |
| MS.gene44893.t1 | MTR_5g070230 | 60.000 | 130 | 50 | 1 | 45 | 172 | 3 | 132 | 3.11e-53 | 168 |
| MS.gene44893.t1 | MTR_5g070270 | 48.413 | 126 | 44 | 7 | 1 | 115 | 1 | 116 | 4.32e-24 | 91.7 |
| MS.gene44893.t1 | MTR_5g070250 | 59.677 | 62 | 24 | 1 | 113 | 173 | 20 | 81 | 1.11e-19 | 82.8 |
| MS.gene44893.t1 | MTR_8g073540 | 46.753 | 77 | 41 | 0 | 85 | 161 | 33 | 109 | 2.00e-17 | 78.6 |
| MS.gene44893.t1 | MTR_1g095500 | 45.455 | 77 | 42 | 0 | 85 | 161 | 33 | 109 | 2.75e-17 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44893.t1 | AT5G58770 | 63.441 | 93 | 34 | 0 | 81 | 173 | 73 | 165 | 2.77e-40 | 138 |
| MS.gene44893.t1 | AT5G58782 | 53.000 | 100 | 47 | 0 | 74 | 173 | 46 | 145 | 2.73e-30 | 112 |
| MS.gene44893.t1 | AT5G58782 | 53.000 | 100 | 47 | 0 | 74 | 173 | 64 | 163 | 3.10e-30 | 112 |
| MS.gene44893.t1 | AT5G58780 | 55.914 | 93 | 41 | 0 | 78 | 170 | 63 | 155 | 3.90e-29 | 109 |
| MS.gene44893.t1 | AT2G23400 | 41.085 | 129 | 75 | 1 | 45 | 173 | 31 | 158 | 2.76e-28 | 104 |
| MS.gene44893.t1 | AT2G23400 | 41.085 | 129 | 75 | 1 | 45 | 173 | 31 | 158 | 3.28e-27 | 103 |
| MS.gene44893.t1 | AT2G23410 | 49.474 | 95 | 47 | 1 | 80 | 173 | 65 | 159 | 6.89e-25 | 98.2 |
| MS.gene44893.t1 | AT5G58784 | 48.889 | 90 | 46 | 0 | 84 | 173 | 69 | 158 | 1.83e-24 | 97.1 |
| MS.gene44893.t1 | AT2G17570 | 47.561 | 82 | 43 | 0 | 85 | 166 | 39 | 120 | 1.21e-18 | 81.3 |
Find 49 sgRNAs with CRISPR-Local
Find 68 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCATTCTCAACCGATAAT+TGG | 0.274745 | 5.2:-59377331 | MS.gene44893:CDS |
| TAAGCATGTGGCGGTGATTA+TGG | 0.306230 | 5.2:-59377480 | MS.gene44893:CDS |
| GTGTTATAGTTGGGGAATAA+AGG | 0.324367 | 5.2:-59377366 | MS.gene44893:CDS |
| CTCATTCTCGATATTCTTCA+AGG | 0.331892 | 5.2:-59377628 | MS.gene44893:CDS |
| TTAGTAGTAGTAGTTGTCTT+TGG | 0.362349 | 5.2:+59377683 | None:intergenic |
| ATGGGAGGTGGGCAAAGATG+AGG | 0.382978 | 5.2:-59377451 | MS.gene44893:CDS |
| TACTACTAACCATGTTCATC+GGG | 0.399960 | 5.2:-59377669 | MS.gene44893:CDS |
| GGTGAGGTTGTGTTATAGTT+GGG | 0.400487 | 5.2:-59377375 | MS.gene44893:CDS |
| TTCAGAAATAGAGCCATTGC+CGG | 0.414839 | 5.2:-59377528 | MS.gene44893:CDS |
| CTTAGGTCGAATCCAATTAT+CGG | 0.425110 | 5.2:+59377319 | None:intergenic |
| GTAGTAGTAGTTGTCTTTGG+TGG | 0.450585 | 5.2:+59377686 | None:intergenic |
| TGGTGAGGTTGTGTTATAGT+TGG | 0.451686 | 5.2:-59377376 | MS.gene44893:CDS |
| CGGTGATTATGGACGGGAAT+GGG | 0.455731 | 5.2:-59377469 | MS.gene44893:CDS |
| TGGGAGGTGGGCAAAGATGA+GGG | 0.455809 | 5.2:-59377450 | MS.gene44893:CDS |
| GGGAGGTGGGCAAAGATGAG+GGG | 0.456021 | 5.2:-59377449 | MS.gene44893:CDS |
| GGAGGTGGGCAAAGATGAGG+GGG | 0.479875 | 5.2:-59377448 | MS.gene44893:CDS |
| CGATAATTGGATTCGACCTA+AGG | 0.480618 | 5.2:-59377318 | MS.gene44893:intron |
| ATTGCCGGAGGAACTGCAAT+CGG | 0.484701 | 5.2:-59377513 | MS.gene44893:CDS |
| AGCTCCGATTGCAGTTCCTC+CGG | 0.485552 | 5.2:+59377509 | None:intergenic |
| CGCGGCAATAGTGACGCGTT+TGG | 0.485624 | 5.2:+59377598 | None:intergenic |
| CCGTCTGCGGGTCATGTAGC+CGG | 0.489572 | 5.2:-59377419 | MS.gene44893:CDS |
| TTATGGACGGGAATGGGAGG+TGG | 0.493196 | 5.2:-59377463 | MS.gene44893:CDS |
| GCGGTGATTATGGACGGGAA+TGG | 0.517607 | 5.2:-59377470 | MS.gene44893:CDS |
| CTACTACTAACCATGTTCAT+CGG | 0.518028 | 5.2:-59377670 | MS.gene44893:CDS |
| GATTGCAGTTCCTCCGGCAA+TGG | 0.522861 | 5.2:+59377515 | None:intergenic |
| CGGCTACATGACCCGCAGAC+GGG | 0.532986 | 5.2:+59377420 | None:intergenic |
| AATTTATTGTTCTTTCAAAG+AGG | 0.535873 | 5.2:+59377165 | None:intergenic |
| GTGAGGTTGTGTTATAGTTG+GGG | 0.555675 | 5.2:-59377374 | MS.gene44893:CDS |
| ATAATCACCGCCACATGCTT+AGG | 0.560502 | 5.2:+59377482 | None:intergenic |
| TATGGACGGGAATGGGAGGT+GGG | 0.565954 | 5.2:-59377462 | MS.gene44893:CDS |
| ATGTGGCGGTGATTATGGAC+GGG | 0.576395 | 5.2:-59377475 | MS.gene44893:CDS |
| TGTAAAGTCGTTGAGAAGGA+TGG | 0.579930 | 5.2:-59377396 | MS.gene44893:CDS |
| GGCTACATGACCCGCAGACG+GGG | 0.586275 | 5.2:+59377421 | None:intergenic |
| CATGTGGCGGTGATTATGGA+CGG | 0.587809 | 5.2:-59377476 | MS.gene44893:CDS |
| CTGAAATTGAAGCACTAGAG+AGG | 0.594486 | 5.2:-59377142 | MS.gene44893:CDS |
| TGATTATGGACGGGAATGGG+AGG | 0.615382 | 5.2:-59377466 | MS.gene44893:CDS |
| CCGGCTACATGACCCGCAGA+CGG | 0.616650 | 5.2:+59377419 | None:intergenic |
| CAAACGCGTCACTATTGCCG+CGG | 0.621205 | 5.2:-59377597 | MS.gene44893:CDS |
| CCGGTGTAAAGTCGTTGAGA+AGG | 0.624155 | 5.2:-59377400 | MS.gene44893:CDS |
| AGTCGTTGAGAAGGATGGTG+AGG | 0.625194 | 5.2:-59377391 | MS.gene44893:CDS |
| GGTGGATGGGGAAACTTCCG+TGG | 0.636917 | 5.2:-59377561 | MS.gene44893:CDS |
| CCTTCTCAACGACTTTACAC+CGG | 0.638232 | 5.2:+59377400 | None:intergenic |
| AGAAATAGAGCCATTGCCGG+AGG | 0.640104 | 5.2:-59377525 | MS.gene44893:CDS |
| CACCTGATCCTGAAAAGCCG+CGG | 0.664185 | 5.2:+59377580 | None:intergenic |
| GGAGCTGATGCCTAAGCATG+TGG | 0.668799 | 5.2:-59377492 | MS.gene44893:CDS |
| GCTACATGACCCGCAGACGG+GGG | 0.669075 | 5.2:+59377422 | None:intergenic |
| CTACTAACCATGTTCATCGG+GGG | 0.676277 | 5.2:-59377667 | MS.gene44893:CDS |
| ACTACTAACCATGTTCATCG+GGG | 0.699404 | 5.2:-59377668 | MS.gene44893:CDS |
| GCTGATGCCTAAGCATGTGG+CGG | 0.712093 | 5.2:-59377489 | MS.gene44893:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTCTTAGTTTTGATTAT+TGG | - | chr5.2:59377619-59377638 | MS.gene44893:CDS | 15.0% |
| !! | AATTTATTGTTCTTTCAAAG+AGG | + | chr5.2:59377687-59377706 | None:intergenic | 20.0% |
| ! | AGTGAAATTAAAATGACCTT+AGG | + | chr5.2:59377550-59377569 | None:intergenic | 25.0% |
| ! | ATGACATTAGTTATTGATAG+TGG | - | chr5.2:59377596-59377615 | MS.gene44893:CDS | 25.0% |
| !!! | GTTATAAGAGTTTTATCTAG+TGG | + | chr5.2:59377139-59377158 | None:intergenic | 25.0% |
| TTAGTAGTAGTAGTTGTCTT+TGG | + | chr5.2:59377169-59377188 | None:intergenic | 30.0% | |
| !!! | GTTTTGATTATTGGTGTTAC+TGG | - | chr5.2:59377628-59377647 | MS.gene44893:CDS | 30.0% |
| CTACTACTAACCATGTTCAT+CGG | - | chr5.2:59377179-59377198 | MS.gene44893:CDS | 35.0% | |
| CTCATTCTCGATATTCTTCA+AGG | - | chr5.2:59377221-59377240 | MS.gene44893:intron | 35.0% | |
| CTTAGGTCGAATCCAATTAT+CGG | + | chr5.2:59377533-59377552 | None:intergenic | 35.0% | |
| GTGTTATAGTTGGGGAATAA+AGG | - | chr5.2:59377483-59377502 | MS.gene44893:CDS | 35.0% | |
| TACTACTAACCATGTTCATC+GGG | - | chr5.2:59377180-59377199 | MS.gene44893:CDS | 35.0% | |
| TTGCATTCTCAACCGATAAT+TGG | - | chr5.2:59377518-59377537 | MS.gene44893:CDS | 35.0% | |
| ! | TTCTGAAAAATCTTCGTCCA+CGG | + | chr5.2:59377308-59377327 | None:intergenic | 35.0% |
| !! | AAGAGTTTTATCTAGTGGCA+TGG | + | chr5.2:59377134-59377153 | None:intergenic | 35.0% |
| !! | AGAGTTTTATCTAGTGGCAT+GGG | + | chr5.2:59377133-59377152 | None:intergenic | 35.0% |
| ACTACTAACCATGTTCATCG+GGG | - | chr5.2:59377181-59377200 | MS.gene44893:CDS | 40.0% | |
| CGATAATTGGATTCGACCTA+AGG | - | chr5.2:59377531-59377550 | MS.gene44893:CDS | 40.0% | |
| GGTGAGGTTGTGTTATAGTT+GGG | - | chr5.2:59377474-59377493 | MS.gene44893:CDS | 40.0% | |
| GTAGTAGTAGTTGTCTTTGG+TGG | + | chr5.2:59377166-59377185 | None:intergenic | 40.0% | |
| GTGAGGTTGTGTTATAGTTG+GGG | - | chr5.2:59377475-59377494 | MS.gene44893:CDS | 40.0% | |
| TGGTGAGGTTGTGTTATAGT+TGG | - | chr5.2:59377473-59377492 | MS.gene44893:CDS | 40.0% | |
| TGTAAAGTCGTTGAGAAGGA+TGG | - | chr5.2:59377453-59377472 | MS.gene44893:CDS | 40.0% | |
| TTCAGAAATAGAGCCATTGC+CGG | - | chr5.2:59377321-59377340 | MS.gene44893:CDS | 40.0% | |
| ! | CTGAAATTGAAGCACTAGAG+AGG | - | chr5.2:59377707-59377726 | MS.gene44893:CDS | 40.0% |
| ATAATCACCGCCACATGCTT+AGG | + | chr5.2:59377370-59377389 | None:intergenic | 45.0% | |
| CCTTCTCAACGACTTTACAC+CGG | + | chr5.2:59377452-59377471 | None:intergenic | 45.0% | |
| CTACTAACCATGTTCATCGG+GGG | - | chr5.2:59377182-59377201 | MS.gene44893:CDS | 45.0% | |
| TAAGCATGTGGCGGTGATTA+TGG | - | chr5.2:59377369-59377388 | MS.gene44893:CDS | 45.0% | |
| TGTTACTGGTGATATGCAGG+TGG | - | chr5.2:59377642-59377661 | MS.gene44893:CDS | 45.0% | |
| !! | CTTTTCAGGATCAGGTGGAT+GGG | - | chr5.2:59377275-59377294 | MS.gene44893:intron | 45.0% |
| !! | TGGTGTTACTGGTGATATGC+AGG | - | chr5.2:59377639-59377658 | MS.gene44893:CDS | 45.0% |
| !! | TTTTCAGGATCAGGTGGATG+GGG | - | chr5.2:59377276-59377295 | MS.gene44893:intron | 45.0% |
| AGAAATAGAGCCATTGCCGG+AGG | - | chr5.2:59377324-59377343 | MS.gene44893:CDS | 50.0% | |
| AGTCGTTGAGAAGGATGGTG+AGG | - | chr5.2:59377458-59377477 | MS.gene44893:CDS | 50.0% | |
| ATGTGGCGGTGATTATGGAC+GGG | - | chr5.2:59377374-59377393 | MS.gene44893:CDS | 50.0% | |
| ATTGCCGGAGGAACTGCAAT+CGG | - | chr5.2:59377336-59377355 | MS.gene44893:CDS | 50.0% | |
| CATGTGGCGGTGATTATGGA+CGG | - | chr5.2:59377373-59377392 | MS.gene44893:CDS | 50.0% | |
| CCGGTGTAAAGTCGTTGAGA+AGG | - | chr5.2:59377449-59377468 | MS.gene44893:CDS | 50.0% | |
| CGGTGATTATGGACGGGAAT+GGG | - | chr5.2:59377380-59377399 | MS.gene44893:CDS | 50.0% | |
| TGATTATGGACGGGAATGGG+AGG | - | chr5.2:59377383-59377402 | MS.gene44893:CDS | 50.0% | |
| !! | GCTTTTCAGGATCAGGTGGA+TGG | - | chr5.2:59377274-59377293 | MS.gene44893:intron | 50.0% |
| AGCTCCGATTGCAGTTCCTC+CGG | + | chr5.2:59377343-59377362 | None:intergenic | 55.0% | |
| ATGGGAGGTGGGCAAAGATG+AGG | - | chr5.2:59377398-59377417 | MS.gene44893:CDS | 55.0% | |
| CAAACGCGTCACTATTGCCG+CGG | - | chr5.2:59377252-59377271 | MS.gene44893:intron | 55.0% | |
| CACCTGATCCTGAAAAGCCG+CGG | + | chr5.2:59377272-59377291 | None:intergenic | 55.0% | |
| GAGTGATCCCCCGATGAACA+TGG | + | chr5.2:59377192-59377211 | None:intergenic | 55.0% | |
| GATTGCAGTTCCTCCGGCAA+TGG | + | chr5.2:59377337-59377356 | None:intergenic | 55.0% | |
| GCGGTGATTATGGACGGGAA+TGG | - | chr5.2:59377379-59377398 | MS.gene44893:CDS | 55.0% | |
| GCTGATGCCTAAGCATGTGG+CGG | - | chr5.2:59377360-59377379 | MS.gene44893:CDS | 55.0% | |
| GGAGCTGATGCCTAAGCATG+TGG | - | chr5.2:59377357-59377376 | MS.gene44893:CDS | 55.0% | |
| TATGGACGGGAATGGGAGGT+GGG | - | chr5.2:59377387-59377406 | MS.gene44893:CDS | 55.0% | |
| TGGGAGGTGGGCAAAGATGA+GGG | - | chr5.2:59377399-59377418 | MS.gene44893:CDS | 55.0% | |
| TTATGGACGGGAATGGGAGG+TGG | - | chr5.2:59377386-59377405 | MS.gene44893:CDS | 55.0% | |
| ! | CACTATTGCCGCGGCTTTTC+AGG | - | chr5.2:59377261-59377280 | MS.gene44893:intron | 55.0% |
| CGCGGCAATAGTGACGCGTT+TGG | + | chr5.2:59377254-59377273 | None:intergenic | 60.0% | |
| GGAGGTGGGCAAAGATGAGG+GGG | - | chr5.2:59377401-59377420 | MS.gene44893:CDS | 60.0% | |
| GGGAGGTGGGCAAAGATGAG+GGG | - | chr5.2:59377400-59377419 | MS.gene44893:CDS | 60.0% | |
| GGTGGATGGGGAAACTTCCG+TGG | - | chr5.2:59377288-59377307 | MS.gene44893:intron | 60.0% | |
| !! | CGCGGCTTTTCAGGATCAGG+TGG | - | chr5.2:59377270-59377289 | MS.gene44893:intron | 60.0% |
| !! | TGCCGCGGCTTTTCAGGATC+AGG | - | chr5.2:59377267-59377286 | MS.gene44893:intron | 60.0% |
| CCGGCTACATGACCCGCAGA+CGG | + | chr5.2:59377433-59377452 | None:intergenic | 65.0% | |
| CCGTCTGCGGGTCATGTAGC+CGG | - | chr5.2:59377430-59377449 | MS.gene44893:CDS | 65.0% | |
| CGGCTACATGACCCGCAGAC+GGG | + | chr5.2:59377432-59377451 | None:intergenic | 65.0% | |
| GCTACATGACCCGCAGACGG+GGG | + | chr5.2:59377430-59377449 | None:intergenic | 65.0% | |
| GGCTACATGACCCGCAGACG+GGG | + | chr5.2:59377431-59377450 | None:intergenic | 65.0% | |
| AGGGGGTTACCCCCGTCTGC+GGG | - | chr5.2:59377418-59377437 | MS.gene44893:CDS | 70.0% | |
| GAGGGGGTTACCCCCGTCTG+CGG | - | chr5.2:59377417-59377436 | MS.gene44893:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 59377112 | 59377759 | 59377112 | ID=MS.gene44893 |
| chr5.2 | mRNA | 59377112 | 59377759 | 59377112 | ID=MS.gene44893.t1;Parent=MS.gene44893 |
| chr5.2 | exon | 59377319 | 59377759 | 59377319 | ID=MS.gene44893.t1.exon1;Parent=MS.gene44893.t1 |
| chr5.2 | CDS | 59377319 | 59377759 | 59377319 | ID=cds.MS.gene44893.t1;Parent=MS.gene44893.t1 |
| chr5.2 | exon | 59377112 | 59377210 | 59377112 | ID=MS.gene44893.t1.exon2;Parent=MS.gene44893.t1 |
| chr5.2 | CDS | 59377112 | 59377210 | 59377112 | ID=cds.MS.gene44893.t1;Parent=MS.gene44893.t1 |
| Gene Sequence |
| Protein sequence |
