Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45786.t1 | AFK48770.1 | 97.6 | 296 | 7 | 0 | 1 | 296 | 78 | 373 | 1.80E-163 | 585.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45786.t1 | Q9SJZ2 | 78.9 | 284 | 60 | 0 | 1 | 284 | 43 | 326 | 2.7e-131 | 469.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45786.t1 | G7JKU3 | 97.6 | 296 | 7 | 0 | 1 | 296 | 120 | 415 | 1.3e-163 | 585.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene20276 | MS.gene45786 | PPI |
MS.gene24236 | MS.gene45786 | PPI |
MS.gene67066 | MS.gene45786 | PPI |
MS.gene27263 | MS.gene45786 | PPI |
MS.gene35853 | MS.gene45786 | PPI |
MS.gene35931 | MS.gene45786 | PPI |
MS.gene90718 | MS.gene45786 | PPI |
MS.gene57204 | MS.gene45786 | PPI |
MS.gene35795 | MS.gene45786 | PPI |
MS.gene80170 | MS.gene45786 | PPI |
MS.gene27001 | MS.gene45786 | PPI |
MS.gene09575 | MS.gene45786 | PPI |
MS.gene029047 | MS.gene45786 | PPI |
MS.gene014924 | MS.gene45786 | PPI |
MS.gene32635 | MS.gene45786 | PPI |
MS.gene32715 | MS.gene45786 | PPI |
MS.gene072888 | MS.gene45786 | PPI |
MS.gene014836 | MS.gene45786 | PPI |
MS.gene015231 | MS.gene45786 | PPI |
MS.gene44482 | MS.gene45786 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45786.t1 | MTR_4g030890 | 97.635 | 296 | 7 | 0 | 1 | 296 | 120 | 415 | 0.0 | 601 |
MS.gene45786.t1 | MTR_4g031140 | 83.446 | 296 | 49 | 0 | 1 | 296 | 48 | 343 | 0.0 | 520 |
MS.gene45786.t1 | MTR_3g072190 | 49.458 | 277 | 130 | 3 | 4 | 277 | 49 | 318 | 4.85e-90 | 271 |
MS.gene45786.t1 | MTR_3g094650 | 46.454 | 282 | 139 | 4 | 1 | 277 | 48 | 322 | 6.96e-87 | 263 |
MS.gene45786.t1 | MTR_5g021060 | 47.500 | 280 | 143 | 3 | 3 | 278 | 52 | 331 | 1.91e-86 | 262 |
MS.gene45786.t1 | MTR_8g076820 | 47.331 | 281 | 144 | 3 | 1 | 277 | 50 | 330 | 4.60e-86 | 261 |
MS.gene45786.t1 | MTR_2g040000 | 47.703 | 283 | 138 | 4 | 3 | 277 | 51 | 331 | 4.03e-85 | 259 |
MS.gene45786.t1 | MTR_5g083860 | 46.809 | 282 | 138 | 4 | 1 | 277 | 51 | 325 | 1.13e-83 | 254 |
MS.gene45786.t1 | MTR_2g029740 | 44.718 | 284 | 152 | 3 | 1 | 279 | 49 | 332 | 1.55e-82 | 253 |
MS.gene45786.t1 | MTR_7g093370 | 44.876 | 283 | 150 | 4 | 1 | 277 | 89 | 371 | 3.72e-82 | 252 |
MS.gene45786.t1 | MTR_3g466200 | 45.936 | 283 | 140 | 5 | 1 | 277 | 45 | 320 | 3.84e-82 | 251 |
MS.gene45786.t1 | MTR_4g122640 | 44.840 | 281 | 149 | 4 | 1 | 277 | 58 | 336 | 4.40e-82 | 251 |
MS.gene45786.t1 | MTR_1g101830 | 48.000 | 275 | 140 | 3 | 4 | 277 | 50 | 322 | 2.15e-81 | 249 |
MS.gene45786.t1 | MTR_4g125940 | 45.745 | 282 | 144 | 4 | 3 | 277 | 50 | 329 | 2.61e-81 | 249 |
MS.gene45786.t1 | MTR_5g074860 | 48.571 | 280 | 130 | 5 | 4 | 276 | 52 | 324 | 3.53e-81 | 248 |
MS.gene45786.t1 | MTR_5g074970 | 46.127 | 284 | 139 | 5 | 1 | 277 | 50 | 326 | 7.44e-81 | 248 |
MS.gene45786.t1 | MTR_1g022970 | 46.809 | 282 | 145 | 3 | 1 | 277 | 66 | 347 | 1.06e-80 | 248 |
MS.gene45786.t1 | MTR_2g084010 | 47.331 | 281 | 137 | 4 | 1 | 277 | 45 | 318 | 1.22e-80 | 247 |
MS.gene45786.t1 | MTR_2g029800 | 44.366 | 284 | 153 | 3 | 1 | 279 | 49 | 332 | 3.72e-80 | 246 |
MS.gene45786.t1 | MTR_2g084080 | 45.714 | 280 | 142 | 3 | 1 | 277 | 45 | 317 | 4.48e-80 | 245 |
MS.gene45786.t1 | MTR_2g084020 | 46.263 | 281 | 140 | 4 | 1 | 277 | 45 | 318 | 5.44e-80 | 245 |
MS.gene45786.t1 | MTR_3g072190 | 48.249 | 257 | 123 | 3 | 24 | 277 | 2 | 251 | 5.88e-80 | 243 |
MS.gene45786.t1 | MTR_4g125940 | 45.455 | 275 | 141 | 4 | 10 | 277 | 2 | 274 | 6.62e-80 | 243 |
MS.gene45786.t1 | MTR_4g029180 | 47.872 | 282 | 135 | 5 | 1 | 277 | 47 | 321 | 3.81e-79 | 243 |
MS.gene45786.t1 | MTR_3g094670 | 45.645 | 287 | 134 | 4 | 1 | 277 | 48 | 322 | 4.68e-79 | 243 |
MS.gene45786.t1 | MTR_4g029170 | 47.163 | 282 | 137 | 5 | 1 | 277 | 47 | 321 | 5.46e-79 | 243 |
MS.gene45786.t1 | MTR_2g029750 | 43.662 | 284 | 155 | 3 | 1 | 279 | 49 | 332 | 5.68e-79 | 244 |
MS.gene45786.t1 | MTR_7g026990 | 44.444 | 279 | 146 | 2 | 1 | 277 | 51 | 322 | 5.86e-79 | 243 |
MS.gene45786.t1 | MTR_5g074760 | 47.183 | 284 | 136 | 5 | 1 | 277 | 45 | 321 | 1.91e-78 | 241 |
MS.gene45786.t1 | MTR_5g014100 | 45.263 | 285 | 143 | 5 | 4 | 277 | 49 | 331 | 2.09e-78 | 241 |
MS.gene45786.t1 | MTR_5g049280 | 44.755 | 286 | 148 | 5 | 1 | 277 | 53 | 337 | 2.32e-78 | 241 |
MS.gene45786.t1 | MTR_4g083710 | 45.423 | 284 | 142 | 5 | 1 | 277 | 47 | 324 | 2.76e-78 | 241 |
MS.gene45786.t1 | MTR_5g074740 | 47.183 | 284 | 136 | 5 | 1 | 277 | 45 | 321 | 4.00e-78 | 240 |
MS.gene45786.t1 | MTR_2g084000 | 44.840 | 281 | 144 | 4 | 1 | 277 | 46 | 319 | 4.30e-78 | 240 |
MS.gene45786.t1 | MTR_2g084110 | 46.263 | 281 | 139 | 5 | 1 | 277 | 45 | 317 | 6.18e-78 | 240 |
MS.gene45786.t1 | MTR_2g028980 | 44.404 | 277 | 149 | 3 | 8 | 279 | 56 | 332 | 1.46e-77 | 240 |
MS.gene45786.t1 | MTR_7g072510 | 45.000 | 280 | 144 | 3 | 1 | 277 | 40 | 312 | 2.15e-77 | 238 |
MS.gene45786.t1 | MTR_4g029200 | 44.765 | 277 | 143 | 3 | 4 | 277 | 69 | 338 | 1.38e-76 | 237 |
MS.gene45786.t1 | MTR_2g084090 | 43.416 | 281 | 148 | 4 | 1 | 277 | 45 | 318 | 2.86e-76 | 236 |
MS.gene45786.t1 | MTR_3g094630 | 46.099 | 282 | 140 | 4 | 1 | 277 | 48 | 322 | 4.33e-76 | 235 |
MS.gene45786.t1 | MTR_5g074710 | 45.775 | 284 | 140 | 5 | 1 | 277 | 45 | 321 | 9.95e-76 | 234 |
MS.gene45786.t1 | MTR_1g054205 | 42.049 | 283 | 158 | 4 | 1 | 277 | 44 | 326 | 1.02e-75 | 234 |
MS.gene45786.t1 | MTR_5g017850 | 44.964 | 278 | 148 | 3 | 4 | 277 | 50 | 326 | 2.25e-75 | 233 |
MS.gene45786.t1 | MTR_2g029560 | 42.143 | 280 | 157 | 3 | 3 | 277 | 46 | 325 | 3.64e-75 | 234 |
MS.gene45786.t1 | MTR_3g466180 | 47.292 | 277 | 136 | 3 | 4 | 277 | 54 | 323 | 3.69e-75 | 233 |
MS.gene45786.t1 | MTR_2g029910 | 44.565 | 276 | 147 | 4 | 8 | 277 | 57 | 332 | 4.39e-75 | 234 |
MS.gene45786.t1 | MTR_5g017860 | 43.885 | 278 | 151 | 3 | 4 | 277 | 50 | 326 | 1.70e-74 | 231 |
MS.gene45786.t1 | MTR_2g029860 | 42.909 | 275 | 152 | 3 | 8 | 277 | 56 | 330 | 6.08e-74 | 231 |
MS.gene45786.t1 | MTR_7g072480 | 45.848 | 277 | 140 | 3 | 4 | 277 | 47 | 316 | 8.05e-74 | 229 |
MS.gene45786.t1 | MTR_2g029820 | 41.549 | 284 | 161 | 3 | 1 | 279 | 49 | 332 | 1.46e-73 | 230 |
MS.gene45786.t1 | MTR_4g074995 | 44.014 | 284 | 133 | 6 | 1 | 277 | 44 | 308 | 1.83e-73 | 228 |
MS.gene45786.t1 | MTR_2g029815 | 41.549 | 284 | 161 | 3 | 1 | 279 | 49 | 332 | 2.36e-73 | 229 |
MS.gene45786.t1 | MTR_2g029850 | 42.199 | 282 | 158 | 3 | 1 | 277 | 49 | 330 | 3.83e-72 | 226 |
MS.gene45786.t1 | MTR_4g074990 | 43.110 | 283 | 134 | 5 | 1 | 277 | 44 | 305 | 6.86e-72 | 224 |
MS.gene45786.t1 | MTR_2g029730 | 41.958 | 286 | 161 | 3 | 1 | 281 | 45 | 330 | 8.82e-72 | 225 |
MS.gene45786.t1 | MTR_2g029830 | 41.877 | 277 | 156 | 3 | 10 | 281 | 57 | 333 | 1.44e-71 | 224 |
MS.gene45786.t1 | MTR_3g467600 | 44.211 | 285 | 144 | 6 | 1 | 277 | 47 | 324 | 1.71e-71 | 223 |
MS.gene45786.t1 | MTR_4g029190 | 41.844 | 282 | 152 | 4 | 1 | 277 | 66 | 340 | 2.64e-71 | 224 |
MS.gene45786.t1 | MTR_8g075100 | 42.086 | 278 | 153 | 6 | 3 | 277 | 47 | 319 | 3.86e-71 | 223 |
MS.gene45786.t1 | MTR_0155s0040 | 41.577 | 279 | 151 | 5 | 1 | 277 | 47 | 315 | 6.86e-71 | 222 |
MS.gene45786.t1 | MTR_1g025980 | 41.877 | 277 | 157 | 4 | 1 | 276 | 44 | 317 | 7.18e-71 | 222 |
MS.gene45786.t1 | MTR_5g022870 | 42.182 | 275 | 154 | 4 | 4 | 277 | 46 | 316 | 2.43e-70 | 220 |
MS.gene45786.t1 | MTR_1g115900 | 41.869 | 289 | 154 | 5 | 1 | 283 | 47 | 327 | 4.40e-70 | 220 |
MS.gene45786.t1 | MTR_1g077000 | 43.011 | 279 | 147 | 5 | 1 | 277 | 59 | 327 | 1.12e-69 | 219 |
MS.gene45786.t1 | MTR_3g092990 | 40.569 | 281 | 163 | 3 | 1 | 277 | 46 | 326 | 8.57e-68 | 214 |
MS.gene45786.t1 | MTR_4g031040 | 63.793 | 174 | 20 | 2 | 40 | 213 | 1 | 131 | 1.31e-66 | 204 |
MS.gene45786.t1 | MTR_7g029030 | 41.791 | 268 | 147 | 5 | 14 | 277 | 58 | 320 | 3.71e-65 | 207 |
MS.gene45786.t1 | MTR_7g086820 | 39.716 | 282 | 160 | 6 | 1 | 279 | 40 | 314 | 4.89e-65 | 207 |
MS.gene45786.t1 | MTR_4g087965 | 42.403 | 283 | 139 | 8 | 7 | 273 | 68 | 342 | 1.87e-64 | 206 |
MS.gene45786.t1 | MTR_4g133800 | 41.091 | 275 | 150 | 7 | 7 | 277 | 67 | 333 | 5.07e-64 | 205 |
MS.gene45786.t1 | MTR_4g046713 | 39.927 | 273 | 159 | 4 | 9 | 277 | 55 | 326 | 5.55e-64 | 204 |
MS.gene45786.t1 | MTR_2g029830 | 40.769 | 260 | 149 | 3 | 27 | 281 | 6 | 265 | 1.56e-63 | 202 |
MS.gene45786.t1 | MTR_1g009750 | 39.927 | 273 | 157 | 5 | 11 | 277 | 57 | 328 | 5.35e-63 | 202 |
MS.gene45786.t1 | MTR_4g074980 | 40.143 | 279 | 136 | 6 | 1 | 277 | 45 | 294 | 2.04e-62 | 199 |
MS.gene45786.t1 | MTR_7g107520 | 39.706 | 272 | 157 | 5 | 9 | 277 | 53 | 320 | 3.93e-62 | 199 |
MS.gene45786.t1 | MTR_2g088770 | 40.364 | 275 | 157 | 6 | 9 | 278 | 54 | 326 | 3.34e-61 | 197 |
MS.gene45786.t1 | MTR_5g016010 | 37.234 | 282 | 171 | 4 | 1 | 276 | 47 | 328 | 1.49e-60 | 196 |
MS.gene45786.t1 | MTR_4g132490 | 36.397 | 272 | 167 | 3 | 10 | 277 | 58 | 327 | 1.96e-60 | 195 |
MS.gene45786.t1 | MTR_4g074980 | 46.047 | 215 | 106 | 3 | 1 | 211 | 45 | 253 | 3.51e-60 | 192 |
MS.gene45786.t1 | MTR_1g086320 | 41.549 | 284 | 159 | 5 | 1 | 277 | 50 | 333 | 1.43e-59 | 193 |
MS.gene45786.t1 | MTR_5g074860 | 41.071 | 280 | 112 | 5 | 4 | 276 | 52 | 285 | 1.59e-59 | 191 |
MS.gene45786.t1 | MTR_2g437770 | 40.741 | 270 | 147 | 7 | 12 | 277 | 81 | 341 | 3.49e-59 | 192 |
MS.gene45786.t1 | MTR_3g092990 | 40.784 | 255 | 147 | 3 | 27 | 277 | 61 | 315 | 4.16e-58 | 189 |
MS.gene45786.t1 | MTR_7g086870 | 37.226 | 274 | 147 | 6 | 13 | 277 | 54 | 311 | 6.58e-58 | 188 |
MS.gene45786.t1 | MTR_1g038680 | 40.426 | 282 | 161 | 6 | 3 | 277 | 51 | 332 | 1.67e-57 | 188 |
MS.gene45786.t1 | MTR_8g062780 | 39.068 | 279 | 165 | 4 | 9 | 282 | 51 | 329 | 3.64e-57 | 187 |
MS.gene45786.t1 | MTR_6g043460 | 38.321 | 274 | 155 | 7 | 15 | 283 | 70 | 334 | 7.08e-57 | 187 |
MS.gene45786.t1 | MTR_0286s0010 | 38.214 | 280 | 161 | 7 | 6 | 277 | 59 | 334 | 1.22e-56 | 186 |
MS.gene45786.t1 | MTR_6g008075 | 38.214 | 280 | 161 | 7 | 6 | 277 | 59 | 334 | 1.22e-56 | 186 |
MS.gene45786.t1 | MTR_5g033470 | 38.489 | 278 | 161 | 6 | 9 | 277 | 101 | 377 | 1.67e-56 | 186 |
MS.gene45786.t1 | MTR_2g008710 | 39.259 | 270 | 152 | 6 | 15 | 277 | 61 | 325 | 4.49e-56 | 184 |
MS.gene45786.t1 | MTR_1g086490 | 40.206 | 291 | 160 | 5 | 1 | 277 | 50 | 340 | 7.20e-56 | 184 |
MS.gene45786.t1 | MTR_6g043280 | 37.456 | 283 | 164 | 7 | 1 | 279 | 61 | 334 | 1.26e-55 | 183 |
MS.gene45786.t1 | MTR_1g090760 | 37.091 | 275 | 167 | 5 | 9 | 277 | 56 | 330 | 3.07e-55 | 182 |
MS.gene45786.t1 | MTR_4g114210 | 38.434 | 281 | 156 | 6 | 7 | 277 | 47 | 320 | 1.85e-54 | 179 |
MS.gene45786.t1 | MTR_6g043240 | 37.884 | 293 | 161 | 9 | 1 | 284 | 58 | 338 | 4.83e-54 | 179 |
MS.gene45786.t1 | MTR_4g127670 | 37.546 | 269 | 159 | 5 | 11 | 273 | 54 | 319 | 7.09e-54 | 178 |
MS.gene45786.t1 | MTR_2g099175 | 36.496 | 274 | 161 | 6 | 12 | 277 | 67 | 335 | 2.50e-53 | 177 |
MS.gene45786.t1 | MTR_6g027440 | 35.897 | 273 | 168 | 4 | 7 | 277 | 47 | 314 | 2.03e-52 | 174 |
MS.gene45786.t1 | MTR_2g067440 | 36.577 | 298 | 153 | 6 | 14 | 277 | 93 | 388 | 2.65e-52 | 176 |
MS.gene45786.t1 | MTR_1g009750 | 36.900 | 271 | 151 | 6 | 11 | 277 | 57 | 311 | 8.47e-52 | 172 |
MS.gene45786.t1 | MTR_4g095450 | 35.662 | 272 | 164 | 5 | 11 | 276 | 57 | 323 | 1.30e-51 | 172 |
MS.gene45786.t1 | MTR_2g077990 | 36.949 | 295 | 150 | 6 | 14 | 273 | 109 | 402 | 7.49e-51 | 172 |
MS.gene45786.t1 | MTR_1g066640 | 35.165 | 273 | 165 | 4 | 11 | 277 | 57 | 323 | 8.73e-51 | 170 |
MS.gene45786.t1 | MTR_1g066710 | 34.799 | 273 | 166 | 5 | 11 | 277 | 57 | 323 | 3.74e-50 | 169 |
MS.gene45786.t1 | MTR_1g066380 | 34.799 | 273 | 166 | 4 | 11 | 277 | 57 | 323 | 3.94e-50 | 169 |
MS.gene45786.t1 | MTR_1g066680 | 34.767 | 279 | 170 | 4 | 5 | 277 | 50 | 322 | 2.68e-49 | 166 |
MS.gene45786.t1 | MTR_2g078610 | 36.271 | 295 | 152 | 6 | 14 | 273 | 109 | 402 | 3.53e-49 | 168 |
MS.gene45786.t1 | MTR_4g132110 | 33.692 | 279 | 173 | 4 | 7 | 279 | 58 | 330 | 3.28e-48 | 164 |
MS.gene45786.t1 | MTR_2g078280 | 36.299 | 281 | 145 | 5 | 14 | 261 | 109 | 388 | 5.94e-48 | 165 |
MS.gene45786.t1 | MTR_4g132110 | 33.099 | 284 | 173 | 5 | 7 | 279 | 58 | 335 | 4.34e-46 | 158 |
MS.gene45786.t1 | MTR_2g008730 | 38.017 | 242 | 141 | 5 | 43 | 277 | 62 | 301 | 1.51e-45 | 156 |
MS.gene45786.t1 | MTR_1g066380 | 33.977 | 259 | 159 | 4 | 25 | 277 | 3 | 255 | 2.65e-45 | 154 |
MS.gene45786.t1 | MTR_2g008160 | 35.439 | 285 | 171 | 7 | 1 | 277 | 44 | 323 | 6.04e-44 | 152 |
MS.gene45786.t1 | MTR_3g072210 | 44.503 | 191 | 94 | 4 | 92 | 277 | 55 | 238 | 9.79e-44 | 149 |
MS.gene45786.t1 | MTR_5g074700 | 40.611 | 229 | 112 | 6 | 54 | 277 | 5 | 214 | 7.94e-43 | 146 |
MS.gene45786.t1 | MTR_2g067450 | 36.264 | 273 | 147 | 9 | 20 | 276 | 49 | 310 | 8.69e-43 | 149 |
MS.gene45786.t1 | MTR_7g072490 | 38.034 | 234 | 85 | 5 | 27 | 260 | 2 | 175 | 5.06e-39 | 136 |
MS.gene45786.t1 | MTR_3g105790 | 33.692 | 279 | 168 | 8 | 8 | 277 | 52 | 322 | 2.11e-38 | 138 |
MS.gene45786.t1 | MTR_0147s0010 | 30.584 | 291 | 165 | 6 | 9 | 276 | 105 | 381 | 9.07e-36 | 132 |
MS.gene45786.t1 | MTR_2g029880 | 38.220 | 191 | 101 | 4 | 93 | 277 | 9 | 188 | 1.08e-35 | 128 |
MS.gene45786.t1 | MTR_3g072260 | 62.353 | 85 | 32 | 0 | 4 | 88 | 49 | 133 | 6.86e-32 | 115 |
MS.gene45786.t1 | MTR_2g008160 | 31.228 | 285 | 148 | 7 | 1 | 277 | 44 | 288 | 1.47e-31 | 119 |
MS.gene45786.t1 | MTR_3g105790 | 32.766 | 235 | 145 | 6 | 52 | 277 | 16 | 246 | 7.57e-30 | 113 |
MS.gene45786.t1 | MTR_2g008160 | 40.000 | 150 | 86 | 3 | 1 | 150 | 44 | 189 | 4.78e-29 | 110 |
MS.gene45786.t1 | MTR_2g077980 | 31.071 | 280 | 143 | 9 | 43 | 277 | 11 | 285 | 2.23e-25 | 102 |
MS.gene45786.t1 | MTR_7g086790 | 34.031 | 191 | 105 | 4 | 28 | 218 | 17 | 186 | 3.01e-25 | 100 |
MS.gene45786.t1 | MTR_5g058120 | 33.140 | 172 | 101 | 4 | 114 | 282 | 4 | 164 | 8.08e-21 | 89.7 |
MS.gene45786.t1 | MTR_3g462850 | 38.732 | 142 | 77 | 5 | 145 | 277 | 9 | 149 | 1.97e-20 | 85.9 |
MS.gene45786.t1 | MTR_2g078560 | 29.730 | 222 | 122 | 4 | 86 | 273 | 95 | 316 | 2.13e-20 | 89.7 |
MS.gene45786.t1 | MTR_6g048160 | 54.930 | 71 | 28 | 2 | 20 | 90 | 22 | 88 | 7.39e-20 | 82.8 |
MS.gene45786.t1 | MTR_4g114220 | 45.238 | 84 | 36 | 2 | 7 | 90 | 29 | 102 | 1.08e-16 | 75.9 |
MS.gene45786.t1 | MTR_1g098320 | 47.436 | 78 | 39 | 1 | 202 | 277 | 47 | 124 | 4.29e-16 | 73.9 |
MS.gene45786.t1 | MTR_5g022510 | 28.436 | 211 | 104 | 4 | 55 | 261 | 50 | 217 | 9.56e-15 | 72.8 |
MS.gene45786.t1 | MTR_5g022510 | 28.910 | 211 | 103 | 5 | 55 | 261 | 75 | 242 | 1.05e-14 | 73.2 |
MS.gene45786.t1 | MTR_7g086785 | 42.308 | 78 | 44 | 1 | 27 | 104 | 4 | 80 | 4.17e-12 | 63.2 |
MS.gene45786.t1 | MTR_3g107060 | 32.903 | 155 | 88 | 5 | 1 | 151 | 96 | 238 | 1.06e-11 | 64.7 |
MS.gene45786.t1 | MTR_5g074770 | 37.363 | 91 | 53 | 2 | 190 | 276 | 18 | 108 | 1.18e-11 | 60.8 |
MS.gene45786.t1 | MTR_7g086810 | 31.624 | 117 | 53 | 3 | 1 | 117 | 26 | 115 | 1.64e-11 | 63.2 |
MS.gene45786.t1 | MTR_1g089005 | 39.560 | 91 | 48 | 2 | 9 | 93 | 43 | 132 | 2.03e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45786.t1 | AT2G22420 | 78.596 | 285 | 61 | 0 | 1 | 285 | 43 | 327 | 3.60e-171 | 477 |
MS.gene45786.t1 | AT5G19890 | 51.071 | 280 | 128 | 4 | 4 | 278 | 53 | 328 | 1.01e-92 | 278 |
MS.gene45786.t1 | AT4G36430 | 48.029 | 279 | 141 | 3 | 3 | 277 | 52 | 330 | 1.08e-87 | 265 |
MS.gene45786.t1 | AT2G18150 | 47.143 | 280 | 144 | 3 | 3 | 278 | 58 | 337 | 2.02e-86 | 262 |
MS.gene45786.t1 | AT5G66390 | 47.163 | 282 | 145 | 3 | 3 | 280 | 55 | 336 | 3.20e-86 | 261 |
MS.gene45786.t1 | AT4G16270 | 47.500 | 280 | 143 | 4 | 1 | 277 | 70 | 348 | 3.31e-85 | 259 |
MS.gene45786.t1 | AT5G06730 | 44.718 | 284 | 152 | 3 | 1 | 279 | 53 | 336 | 2.07e-84 | 258 |
MS.gene45786.t1 | AT5G06720 | 46.454 | 282 | 146 | 3 | 1 | 277 | 52 | 333 | 3.24e-84 | 256 |
MS.gene45786.t1 | AT2G18140 | 47.500 | 280 | 143 | 3 | 3 | 278 | 57 | 336 | 1.21e-83 | 255 |
MS.gene45786.t1 | AT3G50990 | 45.161 | 279 | 149 | 3 | 3 | 277 | 63 | 341 | 5.29e-83 | 254 |
MS.gene45786.t1 | AT5G05340 | 45.230 | 283 | 141 | 4 | 1 | 277 | 50 | 324 | 2.06e-82 | 251 |
MS.gene45786.t1 | AT2G38390 | 47.122 | 278 | 141 | 4 | 8 | 279 | 58 | 335 | 2.36e-82 | 252 |
MS.gene45786.t1 | AT1G44970 | 45.745 | 282 | 148 | 3 | 1 | 277 | 65 | 346 | 6.73e-82 | 251 |
MS.gene45786.t1 | AT2G38380 | 47.331 | 281 | 142 | 4 | 5 | 279 | 55 | 335 | 1.40e-81 | 250 |
MS.gene45786.t1 | AT4G08770 | 46.290 | 283 | 145 | 4 | 4 | 279 | 47 | 329 | 3.10e-81 | 249 |
MS.gene45786.t1 | AT4G08780 | 45.230 | 283 | 148 | 4 | 4 | 279 | 47 | 329 | 5.25e-80 | 246 |
MS.gene45786.t1 | AT5G58400 | 45.583 | 283 | 141 | 5 | 1 | 277 | 50 | 325 | 6.32e-79 | 243 |
MS.gene45786.t1 | AT1G14540 | 45.552 | 281 | 143 | 4 | 1 | 277 | 41 | 315 | 3.69e-78 | 240 |
MS.gene45786.t1 | AT3G49120 | 45.139 | 288 | 147 | 5 | 1 | 277 | 48 | 335 | 6.90e-78 | 241 |
MS.gene45786.t1 | AT5G58390 | 44.928 | 276 | 139 | 5 | 8 | 277 | 48 | 316 | 1.84e-77 | 238 |
MS.gene45786.t1 | AT3G32980 | 46.570 | 277 | 141 | 4 | 8 | 277 | 58 | 334 | 9.81e-77 | 238 |
MS.gene45786.t1 | AT3G49110 | 45.848 | 277 | 143 | 4 | 8 | 277 | 60 | 336 | 1.60e-76 | 238 |
MS.gene45786.t1 | AT5G19880 | 46.667 | 285 | 144 | 5 | 1 | 277 | 45 | 329 | 6.73e-76 | 235 |
MS.gene45786.t1 | AT1G49570 | 44.765 | 277 | 147 | 4 | 3 | 273 | 70 | 346 | 2.07e-74 | 232 |
MS.gene45786.t1 | AT1G68850 | 42.361 | 288 | 150 | 6 | 3 | 277 | 51 | 335 | 1.18e-73 | 229 |
MS.gene45786.t1 | AT2G35380 | 45.583 | 283 | 145 | 5 | 4 | 277 | 53 | 335 | 1.25e-73 | 229 |
MS.gene45786.t1 | AT5G51890 | 43.369 | 279 | 154 | 3 | 1 | 277 | 46 | 322 | 1.08e-72 | 226 |
MS.gene45786.t1 | AT1G14550 | 43.262 | 282 | 149 | 5 | 1 | 277 | 46 | 321 | 7.77e-72 | 224 |
MS.gene45786.t1 | AT4G33420 | 45.161 | 279 | 141 | 5 | 1 | 277 | 57 | 325 | 4.99e-71 | 223 |
MS.gene45786.t1 | AT4G33420 | 45.161 | 279 | 141 | 5 | 1 | 277 | 104 | 372 | 1.06e-70 | 223 |
MS.gene45786.t1 | AT5G42180 | 42.599 | 277 | 155 | 4 | 1 | 276 | 43 | 316 | 2.30e-70 | 220 |
MS.gene45786.t1 | AT5G17820 | 42.279 | 272 | 144 | 6 | 9 | 277 | 52 | 313 | 1.33e-68 | 216 |
MS.gene45786.t1 | AT1G71695 | 42.612 | 291 | 153 | 7 | 1 | 284 | 64 | 347 | 1.25e-67 | 215 |
MS.gene45786.t1 | AT5G17820 | 42.279 | 272 | 144 | 6 | 9 | 277 | 105 | 366 | 1.49e-67 | 215 |
MS.gene45786.t1 | AT3G03670 | 39.437 | 284 | 160 | 4 | 1 | 277 | 43 | 321 | 1.49e-66 | 211 |
MS.gene45786.t1 | AT3G49960 | 38.163 | 283 | 169 | 4 | 1 | 277 | 47 | 329 | 3.63e-63 | 202 |
MS.gene45786.t1 | AT5G15180 | 42.143 | 280 | 148 | 8 | 6 | 277 | 56 | 329 | 5.30e-62 | 199 |
MS.gene45786.t1 | AT5G67400 | 39.194 | 273 | 160 | 4 | 11 | 277 | 57 | 329 | 2.70e-61 | 197 |
MS.gene45786.t1 | AT4G37520 | 37.363 | 273 | 165 | 4 | 11 | 277 | 57 | 329 | 5.03e-61 | 197 |
MS.gene45786.t1 | AT4G37530 | 37.456 | 283 | 171 | 4 | 1 | 277 | 47 | 329 | 8.90e-61 | 196 |
MS.gene45786.t1 | AT5G64120 | 39.194 | 273 | 157 | 6 | 8 | 277 | 62 | 328 | 2.83e-60 | 195 |
MS.gene45786.t1 | AT1G05260 | 40.146 | 274 | 157 | 6 | 9 | 277 | 54 | 325 | 5.27e-60 | 194 |
MS.gene45786.t1 | AT4G11290 | 40.942 | 276 | 154 | 6 | 9 | 277 | 53 | 326 | 6.13e-60 | 194 |
MS.gene45786.t1 | AT2G34060 | 41.219 | 279 | 148 | 9 | 9 | 275 | 70 | 344 | 3.30e-59 | 192 |
MS.gene45786.t1 | AT3G01190 | 41.281 | 281 | 150 | 8 | 4 | 277 | 49 | 321 | 9.64e-59 | 191 |
MS.gene45786.t1 | AT5G39580 | 39.051 | 274 | 157 | 7 | 8 | 277 | 52 | 319 | 2.07e-58 | 190 |
MS.gene45786.t1 | AT4G37520 | 36.630 | 273 | 164 | 5 | 11 | 277 | 57 | 326 | 3.10e-58 | 189 |
MS.gene45786.t1 | AT1G05240 | 39.350 | 277 | 159 | 6 | 7 | 277 | 52 | 325 | 3.15e-58 | 189 |
MS.gene45786.t1 | AT1G05250 | 39.350 | 277 | 159 | 6 | 7 | 277 | 52 | 325 | 3.15e-58 | 189 |
MS.gene45786.t1 | AT5G40150 | 38.628 | 277 | 160 | 4 | 6 | 277 | 57 | 328 | 3.81e-58 | 189 |
MS.gene45786.t1 | AT1G24110 | 36.918 | 279 | 168 | 5 | 6 | 278 | 47 | 323 | 7.99e-58 | 188 |
MS.gene45786.t1 | AT3G28200 | 38.489 | 278 | 158 | 5 | 6 | 277 | 46 | 316 | 1.04e-57 | 188 |
MS.gene45786.t1 | AT4G30170 | 36.462 | 277 | 158 | 6 | 11 | 277 | 57 | 325 | 3.35e-57 | 187 |
MS.gene45786.t1 | AT2G41480 | 39.362 | 282 | 150 | 7 | 8 | 277 | 56 | 328 | 7.54e-57 | 186 |
MS.gene45786.t1 | AT2G35380 | 43.725 | 247 | 130 | 5 | 40 | 277 | 1 | 247 | 8.70e-57 | 183 |
MS.gene45786.t1 | AT1G30870 | 38.971 | 272 | 152 | 7 | 14 | 279 | 84 | 347 | 7.07e-56 | 184 |
MS.gene45786.t1 | AT2G18980 | 36.429 | 280 | 154 | 5 | 11 | 277 | 55 | 323 | 7.54e-56 | 183 |
MS.gene45786.t1 | AT3G21770 | 38.078 | 281 | 151 | 6 | 9 | 276 | 57 | 327 | 2.64e-55 | 182 |
MS.gene45786.t1 | AT2G39040 | 38.516 | 283 | 161 | 8 | 6 | 277 | 70 | 350 | 5.49e-55 | 182 |
MS.gene45786.t1 | AT4G17690 | 38.267 | 277 | 159 | 6 | 7 | 277 | 52 | 322 | 3.68e-54 | 179 |
MS.gene45786.t1 | AT5G64110 | 38.489 | 278 | 159 | 6 | 6 | 277 | 59 | 330 | 6.34e-54 | 179 |
MS.gene45786.t1 | AT5G64100 | 37.143 | 280 | 152 | 8 | 9 | 277 | 65 | 331 | 7.89e-54 | 178 |
MS.gene45786.t1 | AT4G26010 | 39.114 | 271 | 148 | 7 | 12 | 278 | 53 | 310 | 1.29e-53 | 177 |
MS.gene45786.t1 | AT4G26010 | 39.483 | 271 | 147 | 7 | 12 | 278 | 81 | 338 | 2.07e-53 | 177 |
MS.gene45786.t1 | AT5G14130 | 35.252 | 278 | 154 | 5 | 14 | 277 | 65 | 330 | 2.42e-53 | 177 |
MS.gene45786.t1 | AT4G21960 | 33.935 | 277 | 171 | 4 | 7 | 277 | 57 | 327 | 5.82e-53 | 176 |
MS.gene45786.t1 | AT5G14130 | 35.252 | 278 | 154 | 5 | 14 | 277 | 106 | 371 | 5.85e-53 | 177 |
MS.gene45786.t1 | AT4G33870 | 34.323 | 303 | 160 | 4 | 9 | 273 | 96 | 397 | 6.45e-53 | 178 |
MS.gene45786.t1 | AT3G17070 | 35.439 | 285 | 173 | 4 | 1 | 277 | 58 | 339 | 1.33e-51 | 173 |
MS.gene45786.t1 | AT4G25980 | 36.525 | 282 | 167 | 6 | 4 | 277 | 49 | 326 | 1.89e-51 | 172 |
MS.gene45786.t1 | AT1G77100 | 37.241 | 290 | 155 | 9 | 1 | 277 | 44 | 319 | 5.16e-51 | 171 |
MS.gene45786.t1 | AT4G37530 | 38.983 | 236 | 140 | 3 | 1 | 232 | 47 | 282 | 8.08e-51 | 169 |
MS.gene45786.t1 | AT5G22410 | 37.193 | 285 | 154 | 8 | 3 | 274 | 50 | 322 | 1.09e-50 | 170 |
MS.gene45786.t1 | AT2G37130 | 35.036 | 274 | 165 | 6 | 11 | 277 | 29 | 296 | 8.85e-50 | 167 |
MS.gene45786.t1 | AT2G43480 | 36.101 | 277 | 162 | 7 | 10 | 277 | 65 | 335 | 1.30e-49 | 167 |
MS.gene45786.t1 | AT5G47000 | 34.859 | 284 | 170 | 6 | 6 | 283 | 58 | 332 | 1.66e-49 | 167 |
MS.gene45786.t1 | AT2G37130 | 35.036 | 274 | 165 | 6 | 11 | 277 | 60 | 327 | 1.90e-49 | 167 |
MS.gene45786.t1 | AT1G34510 | 36.232 | 276 | 149 | 8 | 12 | 278 | 53 | 310 | 4.82e-49 | 165 |
MS.gene45786.t1 | AT2G24800 | 35.336 | 283 | 173 | 5 | 1 | 277 | 51 | 329 | 4.94e-48 | 163 |
MS.gene45786.t1 | AT5G24070 | 34.686 | 271 | 163 | 6 | 15 | 277 | 71 | 335 | 1.57e-46 | 160 |
MS.gene45786.t1 | AT4G31760 | 35.789 | 285 | 168 | 7 | 1 | 277 | 49 | 326 | 2.65e-46 | 159 |
MS.gene45786.t1 | AT3G17070 | 35.075 | 268 | 162 | 5 | 18 | 277 | 13 | 276 | 2.70e-45 | 154 |
MS.gene45786.t1 | AT5G39580 | 39.735 | 151 | 86 | 3 | 8 | 158 | 52 | 197 | 5.57e-30 | 114 |
MS.gene45786.t1 | AT4G25980 | 40.690 | 145 | 82 | 3 | 4 | 148 | 94 | 234 | 4.63e-27 | 107 |
MS.gene45786.t1 | AT2G24800 | 37.584 | 149 | 89 | 2 | 1 | 149 | 51 | 195 | 7.39e-23 | 95.1 |
MS.gene45786.t1 | AT1G77490 | 31.795 | 195 | 106 | 6 | 74 | 261 | 165 | 339 | 5.97e-18 | 84.0 |
MS.gene45786.t1 | AT1G77490 | 31.795 | 195 | 106 | 6 | 74 | 261 | 165 | 339 | 7.32e-18 | 83.6 |
MS.gene45786.t1 | AT4G32320 | 29.084 | 251 | 127 | 8 | 13 | 258 | 115 | 319 | 1.95e-16 | 78.6 |
MS.gene45786.t1 | AT3G42570 | 40.000 | 95 | 56 | 1 | 53 | 146 | 53 | 147 | 8.94e-16 | 73.6 |
MS.gene45786.t1 | AT4G08390 | 27.477 | 222 | 127 | 7 | 48 | 261 | 165 | 360 | 3.44e-14 | 72.4 |
MS.gene45786.t1 | AT4G08390 | 27.477 | 222 | 127 | 7 | 48 | 261 | 165 | 360 | 3.44e-14 | 72.4 |
MS.gene45786.t1 | AT4G08390 | 27.477 | 222 | 127 | 7 | 48 | 261 | 165 | 360 | 3.44e-14 | 72.4 |
MS.gene45786.t1 | AT4G08390 | 27.477 | 222 | 127 | 7 | 48 | 261 | 164 | 359 | 3.90e-14 | 72.4 |
Find 62 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTGCTGATATTATAATTA+TGG | 0.196768 | 4.1:-69848170 | MS.gene45786:CDS |
CAACCAAGTCCTTGAAATAT+TGG | 0.258540 | 4.1:+69847312 | None:intergenic |
TGTTGAAGGGATGTTGAAAA+TGG | 0.280353 | 4.1:-69847183 | MS.gene45786:CDS |
TGACAGTGAGATTGAATCTT+TGG | 0.289658 | 4.1:+69847543 | None:intergenic |
ATAACAGAGGCAACACTTCT+TGG | 0.295424 | 4.1:+69848851 | None:intergenic |
AACCATGCTTGGAGAGAAAT+TGG | 0.296203 | 4.1:-69848281 | MS.gene45786:CDS |
GGAGGTGAGGTTAGGAAGAT+TGG | 0.319221 | 4.1:-69847648 | MS.gene45786:CDS |
TGAAGTTGTTGATGAGGTTA+AGG | 0.386837 | 4.1:-69848227 | MS.gene45786:CDS |
TCTGCATCTTGTGTTGAAAC+AGG | 0.387999 | 4.1:+69847087 | None:intergenic |
TTCACTTACCCTCGGACAAA+GGG | 0.407652 | 4.1:-69847254 | MS.gene45786:CDS |
CCTAACCTCACCTCCCAATC+TGG | 0.410911 | 4.1:+69847656 | None:intergenic |
AGAGTACTTGCATTAGCTCT+TGG | 0.415352 | 4.1:+69847578 | None:intergenic |
GACCTGCAGTCCGGTCGGCC+TGG | 0.423724 | 4.1:-69847158 | MS.gene45786:CDS |
CTTGCATTAGCTCTTGGACT+TGG | 0.425085 | 4.1:+69847584 | None:intergenic |
AAGGACTTGGTTGGTGGAAG+AGG | 0.432566 | 4.1:-69847302 | MS.gene45786:CDS |
TTTCGATAACCAATATTTCA+AGG | 0.438590 | 4.1:-69847321 | MS.gene45786:CDS |
CCGGTCGGCCTGGAGAGGTT+AGG | 0.438880 | 4.1:-69847148 | MS.gene45786:CDS |
CCAGATTGGGAGGTGAGGTT+AGG | 0.444088 | 4.1:-69847656 | MS.gene45786:CDS |
TGCAGACAGGAGGACCAGAT+TGG | 0.458093 | 4.1:-69847670 | MS.gene45786:intron |
TTCTAGAGATGCTGTAGCAC+TGG | 0.460212 | 4.1:-69848146 | MS.gene45786:intron |
TAACCAATATTTCAAGGACT+TGG | 0.464692 | 4.1:-69847315 | MS.gene45786:CDS |
AAAGACCTTGTAGCACTCTC+AGG | 0.474322 | 4.1:-69847521 | MS.gene45786:CDS |
TTTCACTTACCCTCGGACAA+AGG | 0.476931 | 4.1:-69847255 | MS.gene45786:CDS |
CTCCAGGCCGACCGGACTGC+AGG | 0.477606 | 4.1:+69847156 | None:intergenic |
CAATTCCTCCTAACCTCTCC+AGG | 0.478911 | 4.1:+69847140 | None:intergenic |
GATGTTGATCAAAATAAGAC+AGG | 0.489751 | 4.1:-69847368 | MS.gene45786:CDS |
GTTGAAGGGATGTTGAAAAT+GGG | 0.491299 | 4.1:-69847182 | MS.gene45786:CDS |
AGCAGGATCAAGTGCAGGGT+CGG | 0.497906 | 4.1:+69847424 | None:intergenic |
CTAAAAGCAGGATCAAGTGC+AGG | 0.499939 | 4.1:+69847419 | None:intergenic |
CAATATTTCAAGGACTTGGT+TGG | 0.502030 | 4.1:-69847311 | MS.gene45786:CDS |
TTTCGGCTATACAATCAATC+AGG | 0.502523 | 4.1:-69847458 | MS.gene45786:CDS |
GCAGACAGGAGGACCAGATT+GGG | 0.504736 | 4.1:-69847669 | MS.gene45786:intron |
GCAGGATCAAGTGCAGGGTC+GGG | 0.507890 | 4.1:+69847425 | None:intergenic |
ATCATTTGAAGTTGTTGATG+AGG | 0.515377 | 4.1:-69848233 | MS.gene45786:CDS |
CCTAACCTCTCCAGGCCGAC+CGG | 0.519904 | 4.1:+69847148 | None:intergenic |
TCAGCACAAGAAACAACTCC+AGG | 0.529028 | 4.1:+69848184 | None:intergenic |
GCTGTAGAGAAGGCTTGCCC+TGG | 0.531221 | 4.1:-69848202 | MS.gene45786:CDS |
GATGATACACCAACCATGCT+TGG | 0.535946 | 4.1:-69848292 | MS.gene45786:CDS |
TATTTCAAGGACTTGGTTGG+TGG | 0.538804 | 4.1:-69847308 | MS.gene45786:CDS |
AAATCACAGGAGTTGAATCA+AGG | 0.542544 | 4.1:+69847342 | None:intergenic |
CTCTCAGGATCTCACTCTAT+CGG | 0.551228 | 4.1:-69847506 | MS.gene45786:CDS |
AAAATGGGTGACCTGCAGTC+CGG | 0.562097 | 4.1:-69847167 | MS.gene45786:CDS |
GCAGTCCGGTCGGCCTGGAG+AGG | 0.564531 | 4.1:-69847153 | MS.gene45786:CDS |
AGCCAATTTCTCTCCAAGCA+TGG | 0.571093 | 4.1:+69848279 | None:intergenic |
GGTTAAGGAAGCTGTAGAGA+AGG | 0.574618 | 4.1:-69848212 | MS.gene45786:CDS |
CTCACTAACCCCTTTGTCCG+AGG | 0.579169 | 4.1:+69847245 | None:intergenic |
TCAAGCTCTAGTCTAAAAGC+AGG | 0.579701 | 4.1:+69847407 | None:intergenic |
GGATCTCACTCTATCGGCCA+AGG | 0.583713 | 4.1:-69847500 | MS.gene45786:CDS |
GTCGGCCTGGAGAGGTTAGG+AGG | 0.583830 | 4.1:-69847145 | MS.gene45786:CDS |
TCACTAACCCCTTTGTCCGA+GGG | 0.588575 | 4.1:+69847246 | None:intergenic |
TATTGGTTATCGAAAATCAC+AGG | 0.593232 | 4.1:+69847329 | None:intergenic |
AATTTCTCTCCAAGCATGGT+TGG | 0.597888 | 4.1:+69848283 | None:intergenic |
CTATACAATCAATCAGGCAG+CGG | 0.615388 | 4.1:-69847452 | MS.gene45786:CDS |
GAGATCCTGAGAGTGCTACA+AGG | 0.617824 | 4.1:+69847516 | None:intergenic |
TGGGTGACCTGCAGTCCGGT+CGG | 0.618415 | 4.1:-69847163 | MS.gene45786:CDS |
GACAGGAGGACCAGATTGGG+AGG | 0.631702 | 4.1:-69847666 | MS.gene45786:CDS |
TAAAAGCAGGATCAAGTGCA+GGG | 0.654038 | 4.1:+69847420 | None:intergenic |
GAGGACCAGATTGGGAGGTG+AGG | 0.674270 | 4.1:-69847661 | MS.gene45786:CDS |
TCACTTACCCTCGGACAAAG+GGG | 0.682108 | 4.1:-69847253 | MS.gene45786:CDS |
CAGCACAAGAAACAACTCCA+GGG | 0.688008 | 4.1:+69848185 | None:intergenic |
AAATTGAAATCTCATAACAG+AGG | 0.697630 | 4.1:+69848838 | None:intergenic |
ATGTTGATCAAAATAAGACA+GGG | 0.715518 | 4.1:-69847367 | MS.gene45786:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAGATAAATATTTTTGATG+TGG | + | chr4.1:69848154-69848173 | None:intergenic | 15.0% |
!!! | AAGATAAATATTTTTGATGT+GGG | + | chr4.1:69848153-69848172 | None:intergenic | 15.0% |
!!! | AATTTTTAGATATGAAAAGT+TGG | - | chr4.1:69847337-69847356 | MS.gene45786:CDS | 15.0% |
!!! | CATCAAAAATATTTATCTTT+TGG | - | chr4.1:69848154-69848173 | MS.gene45786:CDS | 15.0% |
!!! | TTGAAAAGATAAAATTTTGA+TGG | + | chr4.1:69847176-69847195 | None:intergenic | 15.0% |
!!! | AATAATACATCTTGTTTACA+TGG | + | chr4.1:69848207-69848226 | None:intergenic | 20.0% |
!!! | TTATTTGTTGAATTTGTGAA+GGG | - | chr4.1:69847605-69847624 | MS.gene45786:CDS | 20.0% |
!!! | TTGTGCTGATATTATAATTA+TGG | - | chr4.1:69847772-69847791 | MS.gene45786:intron | 20.0% |
!!! | TTTATTTGTTGAATTTGTGA+AGG | - | chr4.1:69847604-69847623 | MS.gene45786:CDS | 20.0% |
! | AAATTGAAATCTCATAACAG+AGG | + | chr4.1:69847107-69847126 | None:intergenic | 25.0% |
! | ATGTTGATCAAAATAAGACA+GGG | - | chr4.1:69848575-69848594 | MS.gene45786:intron | 25.0% |
! | GAAATAGCCAAATTCAAATT+CGG | + | chr4.1:69847456-69847475 | None:intergenic | 25.0% |
! | GAATTTGAATTTGGCTATTT+CGG | - | chr4.1:69847455-69847474 | MS.gene45786:CDS | 25.0% |
! | TTGTTTACATGGACAAAATT+TGG | + | chr4.1:69848196-69848215 | None:intergenic | 25.0% |
! | TTTCGATAACCAATATTTCA+AGG | - | chr4.1:69848621-69848640 | MS.gene45786:intron | 25.0% |
!! | TATTTGTTGAATTTGTGAAG+GGG | - | chr4.1:69847606-69847625 | MS.gene45786:CDS | 25.0% |
!! | TTTTCAAAGCTTTTGTTGAA+GGG | - | chr4.1:69848746-69848765 | MS.gene45786:intron | 25.0% |
!!! | TATTTTGATCAACATCTAGT+GGG | + | chr4.1:69848570-69848589 | None:intergenic | 25.0% |
!!! | TTATTTTGATCAACATCTAG+TGG | + | chr4.1:69848571-69848590 | None:intergenic | 25.0% |
!!! | TTTTTCAAAGCTTTTGTTGA+AGG | - | chr4.1:69848745-69848764 | MS.gene45786:intron | 25.0% |
AACATTTCACCCTTAGAAAA+CGG | + | chr4.1:69848006-69848025 | None:intergenic | 30.0% | |
ACAAAAACAGATATCACTAC+AGG | + | chr4.1:69848102-69848121 | None:intergenic | 30.0% | |
AGATATCTCAACAGTTAACA+AGG | - | chr4.1:69847911-69847930 | MS.gene45786:intron | 30.0% | |
CAAAAACAGATATCACTACA+GGG | + | chr4.1:69848101-69848120 | None:intergenic | 30.0% | |
CATAATCATTGATCTCCATA+GGG | - | chr4.1:69847404-69847423 | MS.gene45786:CDS | 30.0% | |
GATGTTGATCAAAATAAGAC+AGG | - | chr4.1:69848574-69848593 | MS.gene45786:intron | 30.0% | |
GTAACCACAAAGTAGATATA+AGG | + | chr4.1:69847264-69847283 | None:intergenic | 30.0% | |
TAACCAATATTTCAAGGACT+TGG | - | chr4.1:69848627-69848646 | MS.gene45786:intron | 30.0% | |
TACATGGACAAAATTTGGAA+AGG | + | chr4.1:69848191-69848210 | None:intergenic | 30.0% | |
TCATAATCATTGATCTCCAT+AGG | - | chr4.1:69847403-69847422 | MS.gene45786:CDS | 30.0% | |
TGATCCTTATATCTACTTTG+TGG | - | chr4.1:69847257-69847276 | MS.gene45786:CDS | 30.0% | |
! | ATCATTTGAAGTTGTTGATG+AGG | - | chr4.1:69847709-69847728 | MS.gene45786:intron | 30.0% |
! | CACTAAAGTATCACTTTAGA+AGG | + | chr4.1:69847880-69847899 | None:intergenic | 30.0% |
! | TATTGGTTATCGAAAATCAC+AGG | + | chr4.1:69848616-69848635 | None:intergenic | 30.0% |
!! | GATGTTTTTCGATCATGTTT+CGG | - | chr4.1:69848467-69848486 | MS.gene45786:intron | 30.0% |
!! | TGTTTACTTTTATTGCAGAC+AGG | - | chr4.1:69848259-69848278 | MS.gene45786:CDS | 30.0% |
!!! | TGATTTATGCCGTTTTCTAA+GGG | - | chr4.1:69847994-69848013 | MS.gene45786:intron | 30.0% |
!!! | TTGATTTATGCCGTTTTCTA+AGG | - | chr4.1:69847993-69848012 | MS.gene45786:intron | 30.0% |
AAATCACAGGAGTTGAATCA+AGG | + | chr4.1:69848603-69848622 | None:intergenic | 35.0% | |
ACTTCGACCGAATTTGAATT+TGG | - | chr4.1:69847446-69847465 | MS.gene45786:CDS | 35.0% | |
CAACCAAGTCCTTGAAATAT+TGG | + | chr4.1:69848633-69848652 | None:intergenic | 35.0% | |
GATTGCTTGTTTCAGTTGTT+TGG | - | chr4.1:69847527-69847546 | MS.gene45786:CDS | 35.0% | |
GTTGAAGGGATGTTGAAAAT+GGG | - | chr4.1:69848760-69848779 | MS.gene45786:intron | 35.0% | |
TGACAGTGAGATTGAATCTT+TGG | + | chr4.1:69848402-69848421 | None:intergenic | 35.0% | |
TGAGCAAGCAGTAAGAAAAT+AGG | - | chr4.1:69848065-69848084 | MS.gene45786:intron | 35.0% | |
TGTTGAAGGGATGTTGAAAA+TGG | - | chr4.1:69848759-69848778 | MS.gene45786:intron | 35.0% | |
TTTCGGCTATACAATCAATC+AGG | - | chr4.1:69848484-69848503 | MS.gene45786:intron | 35.0% | |
! | AAACACTTTTCACTTACCCT+CGG | - | chr4.1:69848680-69848699 | MS.gene45786:intron | 35.0% |
! | CAATATTTCAAGGACTTGGT+TGG | - | chr4.1:69848631-69848650 | MS.gene45786:intron | 35.0% |
! | TGAAGTTGTTGATGAGGTTA+AGG | - | chr4.1:69847715-69847734 | MS.gene45786:intron | 35.0% |
!! | TTACTTTTATTGCAGACAGG+AGG | - | chr4.1:69848262-69848281 | MS.gene45786:CDS | 35.0% |
AACAAGCAATCGAGCTTAAG+TGG | + | chr4.1:69847518-69847537 | None:intergenic | 40.0% | |
AACCATGCTTGGAGAGAAAT+TGG | - | chr4.1:69847661-69847680 | MS.gene45786:CDS | 40.0% | |
AATCATTGATCTCCATAGGG+AGG | - | chr4.1:69847407-69847426 | MS.gene45786:CDS | 40.0% | |
AATTTCTCTCCAAGCATGGT+TGG | + | chr4.1:69847662-69847681 | None:intergenic | 40.0% | |
ATAACAGAGGCAACACTTCT+TGG | + | chr4.1:69847094-69847113 | None:intergenic | 40.0% | |
ATCATTGATCTCCATAGGGA+GGG | - | chr4.1:69847408-69847427 | MS.gene45786:CDS | 40.0% | |
ATTCAAATTCGGTCGAAGTC+TGG | + | chr4.1:69847445-69847464 | None:intergenic | 40.0% | |
CTATACAATCAATCAGGCAG+CGG | - | chr4.1:69848490-69848509 | MS.gene45786:intron | 40.0% | |
TAAAAGCAGGATCAAGTGCA+GGG | + | chr4.1:69848525-69848544 | None:intergenic | 40.0% | |
TCTGCATCTTGTGTTGAAAC+AGG | + | chr4.1:69848858-69848877 | None:intergenic | 40.0% | |
TGATCGAAAAACATCGACCT+TGG | + | chr4.1:69848462-69848481 | None:intergenic | 40.0% | |
! | AGAGTACTTGCATTAGCTCT+TGG | + | chr4.1:69848367-69848386 | None:intergenic | 40.0% |
! | TATTTCAAGGACTTGGTTGG+TGG | - | chr4.1:69848634-69848653 | MS.gene45786:intron | 40.0% |
! | TCAAGCTCTAGTCTAAAAGC+AGG | + | chr4.1:69848538-69848557 | None:intergenic | 40.0% |
AAAGACCTTGTAGCACTCTC+AGG | - | chr4.1:69848421-69848440 | MS.gene45786:intron | 45.0% | |
AGCCAATTTCTCTCCAAGCA+TGG | + | chr4.1:69847666-69847685 | None:intergenic | 45.0% | |
CAGCACAAGAAACAACTCCA+GGG | + | chr4.1:69847760-69847779 | None:intergenic | 45.0% | |
CTAAAAGCAGGATCAAGTGC+AGG | + | chr4.1:69848526-69848545 | None:intergenic | 45.0% | |
CTCTCAGGATCTCACTCTAT+CGG | - | chr4.1:69848436-69848455 | MS.gene45786:intron | 45.0% | |
GATGATACACCAACCATGCT+TGG | - | chr4.1:69847650-69847669 | MS.gene45786:CDS | 45.0% | |
GGTTAAGGAAGCTGTAGAGA+AGG | - | chr4.1:69847730-69847749 | MS.gene45786:intron | 45.0% | |
TCAGCACAAGAAACAACTCC+AGG | + | chr4.1:69847761-69847780 | None:intergenic | 45.0% | |
TCATTGATCTCCATAGGGAG+GGG | - | chr4.1:69847409-69847428 | MS.gene45786:CDS | 45.0% | |
TTCACTTACCCTCGGACAAA+GGG | - | chr4.1:69848688-69848707 | MS.gene45786:intron | 45.0% | |
TTTCACTTACCCTCGGACAA+AGG | - | chr4.1:69848687-69848706 | MS.gene45786:intron | 45.0% | |
! | CTTGCATTAGCTCTTGGACT+TGG | + | chr4.1:69848361-69848380 | None:intergenic | 45.0% |
! | TTCTAGAGATGCTGTAGCAC+TGG | - | chr4.1:69847796-69847815 | MS.gene45786:intron | 45.0% |
AAAATGGGTGACCTGCAGTC+CGG | - | chr4.1:69848775-69848794 | MS.gene45786:intron | 50.0% | |
ATTACCAGAACCCCTCCCTA+TGG | + | chr4.1:69847422-69847441 | None:intergenic | 50.0% | |
CAATTCCTCCTAACCTCTCC+AGG | + | chr4.1:69848805-69848824 | None:intergenic | 50.0% | |
GGAGGTGAGGTTAGGAAGAT+TGG | - | chr4.1:69848294-69848313 | MS.gene45786:CDS | 50.0% | |
TCACTAACCCCTTTGTCCGA+GGG | + | chr4.1:69848699-69848718 | None:intergenic | 50.0% | |
TCACTTACCCTCGGACAAAG+GGG | - | chr4.1:69848689-69848708 | MS.gene45786:intron | 50.0% | |
!! | AAGGACTTGGTTGGTGGAAG+AGG | - | chr4.1:69848640-69848659 | MS.gene45786:intron | 50.0% |
!! | GAGATCCTGAGAGTGCTACA+AGG | + | chr4.1:69848429-69848448 | None:intergenic | 50.0% |
AGCAGGATCAAGTGCAGGGT+CGG | + | chr4.1:69848521-69848540 | None:intergenic | 55.0% | |
ATCTCCATAGGGAGGGGTTC+TGG | - | chr4.1:69847415-69847434 | MS.gene45786:CDS | 55.0% | |
CCAGATTGGGAGGTGAGGTT+AGG | - | chr4.1:69848286-69848305 | MS.gene45786:CDS | 55.0% | |
CCTAACCTCACCTCCCAATC+TGG | + | chr4.1:69848289-69848308 | None:intergenic | 55.0% | |
CTCACTAACCCCTTTGTCCG+AGG | + | chr4.1:69848700-69848719 | None:intergenic | 55.0% | |
GCAGACAGGAGGACCAGATT+GGG | - | chr4.1:69848273-69848292 | MS.gene45786:CDS | 55.0% | |
GGATCTCACTCTATCGGCCA+AGG | - | chr4.1:69848442-69848461 | MS.gene45786:intron | 55.0% | |
TGCAGACAGGAGGACCAGAT+TGG | - | chr4.1:69848272-69848291 | MS.gene45786:CDS | 55.0% | |
GACAGGAGGACCAGATTGGG+AGG | - | chr4.1:69848276-69848295 | MS.gene45786:CDS | 60.0% | |
GAGGACCAGATTGGGAGGTG+AGG | - | chr4.1:69848281-69848300 | MS.gene45786:CDS | 60.0% | |
GCAGGATCAAGTGCAGGGTC+GGG | + | chr4.1:69848520-69848539 | None:intergenic | 60.0% | |
GCTGTAGAGAAGGCTTGCCC+TGG | - | chr4.1:69847740-69847759 | MS.gene45786:intron | 60.0% | |
CCTAACCTCTCCAGGCCGAC+CGG | + | chr4.1:69848797-69848816 | None:intergenic | 65.0% | |
GTCGGCCTGGAGAGGTTAGG+AGG | - | chr4.1:69848797-69848816 | MS.gene45786:intron | 65.0% | |
TGGGTGACCTGCAGTCCGGT+CGG | - | chr4.1:69848779-69848798 | MS.gene45786:intron | 65.0% | |
CCGGTCGGCCTGGAGAGGTT+AGG | - | chr4.1:69848794-69848813 | MS.gene45786:intron | 70.0% | |
CTCCAGGCCGACCGGACTGC+AGG | + | chr4.1:69848789-69848808 | None:intergenic | 75.0% | |
GACCTGCAGTCCGGTCGGCC+TGG | - | chr4.1:69848784-69848803 | MS.gene45786:intron | 75.0% | |
GCAGTCCGGTCGGCCTGGAG+AGG | - | chr4.1:69848789-69848808 | MS.gene45786:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 69847067 | 69848897 | 69847067 | ID=MS.gene45786 |
chr4.1 | mRNA | 69847067 | 69848897 | 69847067 | ID=MS.gene45786.t1;Parent=MS.gene45786 |
chr4.1 | exon | 69848820 | 69848897 | 69848820 | ID=MS.gene45786.t1.exon1;Parent=MS.gene45786.t1 |
chr4.1 | CDS | 69848820 | 69848897 | 69848820 | ID=cds.MS.gene45786.t1;Parent=MS.gene45786.t1 |
chr4.1 | exon | 69848147 | 69848338 | 69848147 | ID=MS.gene45786.t1.exon2;Parent=MS.gene45786.t1 |
chr4.1 | CDS | 69848147 | 69848338 | 69848147 | ID=cds.MS.gene45786.t1;Parent=MS.gene45786.t1 |
chr4.1 | exon | 69847067 | 69847687 | 69847067 | ID=MS.gene45786.t1.exon3;Parent=MS.gene45786.t1 |
chr4.1 | CDS | 69847067 | 69847687 | 69847067 | ID=cds.MS.gene45786.t1;Parent=MS.gene45786.t1 |
Gene Sequence |
Protein sequence |