Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47683.t1 | XP_024639518.1 | 84.7 | 596 | 37 | 2 | 21 | 562 | 93 | 688 | 1.40E-268 | 935.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47683.t1 | G7KCZ3 | 84.6 | 597 | 37 | 2 | 21 | 562 | 93 | 689 | 1.3e-268 | 934.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene47683 | 0.830568 | 2.73E-55 | -1.69E-46 |
| MS.gene049343 | MS.gene47683 | 0.815573 | 8.63E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene47683 | 0.80181 | 7.55E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene47683 | 0.819917 | 9.03E-53 | -1.69E-46 |
| MS.gene050026 | MS.gene47683 | 0.825444 | 4.67E-54 | -1.69E-46 |
| MS.gene050156 | MS.gene47683 | 0.840279 | 9.57E-58 | -1.69E-46 |
| MS.gene05045 | MS.gene47683 | 0.803708 | 3.06E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene47683 | 0.801785 | 7.64E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene47683 | 0.825296 | 5.06E-54 | -1.69E-46 |
| MS.gene051719 | MS.gene47683 | 0.804699 | 1.91E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene47683 | 0.805814 | 1.11E-49 | -1.69E-46 |
| MS.gene051957 | MS.gene47683 | 0.810373 | 1.19E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene47683 | 0.872961 | 2.13E-67 | -1.69E-46 |
| MS.gene052584 | MS.gene47683 | 0.803757 | 2.99E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene47683 | 0.804835 | 1.79E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene47683 | 0.822463 | 2.34E-53 | -1.69E-46 |
| MS.gene052863 | MS.gene47683 | 0.819919 | 9.02E-53 | -1.69E-46 |
| MS.gene053145 | MS.gene47683 | 0.816806 | 4.57E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene47683 | 0.829078 | 6.30E-55 | -1.69E-46 |
| MS.gene053900 | MS.gene47683 | 0.803824 | 2.90E-49 | -1.69E-46 |
| MS.gene053998 | MS.gene47683 | 0.804197 | 2.42E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene47683 | 0.817445 | 3.29E-52 | -1.69E-46 |
| MS.gene05423 | MS.gene47683 | 0.813843 | 2.08E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene47683 | 0.849373 | 3.37E-60 | -1.69E-46 |
| MS.gene054775 | MS.gene47683 | 0.828298 | 9.72E-55 | -1.69E-46 |
| MS.gene054991 | MS.gene47683 | 0.809052 | 2.29E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene47683 | 0.807348 | 5.28E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene47683 | 0.803311 | 3.70E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene47683 | 0.815035 | 1.14E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene47683 | 0.857895 | 1.19E-62 | -1.69E-46 |
| MS.gene056174 | MS.gene47683 | 0.832093 | 1.15E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene47683 | 0.80919 | 2.14E-50 | -1.69E-46 |
| MS.gene056373 | MS.gene47683 | 0.808051 | 3.74E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene47683 | 0.82806 | 1.11E-54 | -1.69E-46 |
| MS.gene05686 | MS.gene47683 | 0.809322 | 2.00E-50 | -1.69E-46 |
| MS.gene05690 | MS.gene47683 | 0.800986 | 1.11E-48 | -1.69E-46 |
| MS.gene057026 | MS.gene47683 | 0.801978 | 6.98E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene47683 | 0.812711 | 3.70E-51 | -1.69E-46 |
| MS.gene057855 | MS.gene47683 | 0.800484 | 1.41E-48 | -1.69E-46 |
| MS.gene057915 | MS.gene47683 | 0.808063 | 3.72E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene47683 | 0.835536 | 1.58E-56 | -1.69E-46 |
| MS.gene058625 | MS.gene47683 | 0.855487 | 6.11E-62 | -1.69E-46 |
| MS.gene058636 | MS.gene47683 | 0.815987 | 6.97E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene47683 | 0.824728 | 6.90E-54 | -1.69E-46 |
| MS.gene059272 | MS.gene47683 | 0.83787 | 4.03E-57 | -1.69E-46 |
| MS.gene059625 | MS.gene47683 | 0.830857 | 2.32E-55 | -1.69E-46 |
| MS.gene059842 | MS.gene47683 | 0.816016 | 6.87E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene47683 | 0.801037 | 1.09E-48 | -1.69E-46 |
| MS.gene060521 | MS.gene47683 | 0.820514 | 6.59E-53 | -1.69E-46 |
| MS.gene060572 | MS.gene47683 | 0.801542 | 8.57E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47683.t1 | MTR_5g090200 | 86.097 | 597 | 28 | 2 | 21 | 562 | 93 | 689 | 0.0 | 1017 |
| MS.gene47683.t1 | MTR_5g090215 | 67.511 | 237 | 27 | 3 | 32 | 227 | 16 | 243 | 4.64e-91 | 280 |
| MS.gene47683.t1 | MTR_7g451470 | 58.571 | 280 | 81 | 4 | 1 | 273 | 775 | 1026 | 6.09e-89 | 296 |
| MS.gene47683.t1 | MTR_2g031380 | 49.828 | 291 | 111 | 5 | 260 | 548 | 938 | 1195 | 1.31e-68 | 241 |
| MS.gene47683.t1 | MTR_2g031380 | 36.196 | 326 | 123 | 10 | 23 | 274 | 97 | 411 | 2.24e-27 | 118 |
| MS.gene47683.t1 | MTR_2g031380 | 49.828 | 291 | 111 | 5 | 260 | 548 | 981 | 1238 | 1.82e-68 | 240 |
| MS.gene47683.t1 | MTR_2g031380 | 36.196 | 326 | 123 | 10 | 23 | 274 | 97 | 411 | 2.00e-27 | 118 |
| MS.gene47683.t1 | MTR_2g031380 | 49.828 | 291 | 111 | 5 | 260 | 548 | 987 | 1244 | 1.85e-68 | 240 |
| MS.gene47683.t1 | MTR_2g031380 | 36.196 | 326 | 123 | 10 | 23 | 274 | 97 | 411 | 1.72e-27 | 118 |
| MS.gene47683.t1 | MTR_2g031380 | 49.828 | 291 | 111 | 5 | 260 | 548 | 1030 | 1287 | 2.05e-68 | 240 |
| MS.gene47683.t1 | MTR_2g031380 | 36.196 | 326 | 123 | 10 | 23 | 274 | 97 | 411 | 1.86e-27 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47683.t1 | AT2G34780 | 39.041 | 146 | 87 | 1 | 396 | 539 | 1141 | 1286 | 1.67e-22 | 102 |
| MS.gene47683.t1 | AT2G34780 | 39.041 | 146 | 87 | 1 | 396 | 539 | 1080 | 1225 | 1.90e-22 | 102 |
| MS.gene47683.t1 | AT2G34780 | 39.041 | 146 | 87 | 1 | 396 | 539 | 1080 | 1225 | 1.90e-22 | 102 |
| MS.gene47683.t1 | AT2G34780 | 39.041 | 146 | 87 | 1 | 396 | 539 | 1080 | 1225 | 1.90e-22 | 102 |
Find 108 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTACTTGCACATTTAAAAT+AGG | 0.173028 | 5.3:+72785668 | MS.gene47683:CDS |
| CTGTAGATTGAAGGAGCTTT+TGG | 0.189291 | 5.3:+72781250 | MS.gene47683:CDS |
| GATAGATGTTAGTATGAAAA+AGG | 0.216137 | 5.3:-72785509 | None:intergenic |
| CAAATTGATTTGTTAGATTC+TGG | 0.222278 | 5.3:+72783108 | MS.gene47683:CDS |
| ATTCAGCGCCTTCTAATAAT+TGG | 0.254250 | 5.3:-72783020 | None:intergenic |
| CAGAATCTAACAAATCAATT+TGG | 0.260614 | 5.3:-72783107 | None:intergenic |
| ACTTTGAGGAAGTGGTTCTT+TGG | 0.271730 | 5.3:+72785570 | MS.gene47683:CDS |
| CCATTTCAGTTTGATTTCTC+AGG | 0.311924 | 5.3:-72781750 | None:intergenic |
| TGCCGAAACTTGGAAGTTAC+TGG | 0.318427 | 5.3:+72781313 | MS.gene47683:CDS |
| TTCCAGTAACTTCCAAGTTT+CGG | 0.329335 | 5.3:-72781315 | None:intergenic |
| CTTTGAGGAAGTGGTTCTTT+GGG | 0.332707 | 5.3:+72785571 | MS.gene47683:CDS |
| CTCTTTGTCGTTCTTCCTCT+TGG | 0.345640 | 5.3:+72785477 | MS.gene47683:CDS |
| GATAGTTGCCAATTATTAGA+AGG | 0.346236 | 5.3:+72783012 | MS.gene47683:CDS |
| GATTGTTACTTCTGCTCATC+GGG | 0.347256 | 5.3:+72781151 | MS.gene47683:intron |
| CTGCTCATCGGGGATGCAAC+GGG | 0.348667 | 5.3:+72781162 | MS.gene47683:CDS |
| CATTGAGATGGTTAAATTAG+AGG | 0.356846 | 5.3:+72781591 | MS.gene47683:CDS |
| AGGCACTTGCACAAGATAAC+TGG | 0.361371 | 5.3:+72781620 | MS.gene47683:CDS |
| ATCGGGGATGCAACGGGGAT+GGG | 0.362558 | 5.3:+72781168 | MS.gene47683:CDS |
| TCGGGGATGCAACGGGGATG+GGG | 0.364245 | 5.3:+72781169 | MS.gene47683:CDS |
| GTACTTGCACATTTAAAATA+GGG | 0.367923 | 5.3:+72785669 | MS.gene47683:CDS |
| GACGAGAATGAGAAGGTATT+AGG | 0.370192 | 5.3:+72781191 | MS.gene47683:CDS |
| GATCAACAAATATTGCTATC+TGG | 0.378109 | 5.3:+72785603 | MS.gene47683:CDS |
| TTCGCAGCAAGTGTTAATAA+TGG | 0.380922 | 5.3:-72780615 | None:intergenic |
| TCGCAGCAAGTGTTAATAAT+GGG | 0.386484 | 5.3:-72780614 | None:intergenic |
| GTTGCTATCATTGTACTTCT+CGG | 0.387871 | 5.3:+72783784 | MS.gene47683:CDS |
| AATCAATTTGGTTTATCCCT+TGG | 0.397798 | 5.3:-72783095 | None:intergenic |
| CAAGCATGCAATTGCATCAA+TGG | 0.397885 | 5.3:-72783043 | None:intergenic |
| TAGACAATGTTGAAACTTTG+AGG | 0.401027 | 5.3:+72785556 | MS.gene47683:CDS |
| GGAAGAAAGTTGCCGAAACT+TGG | 0.407982 | 5.3:+72781303 | MS.gene47683:CDS |
| CCAATGACACGATATCAATA+AGG | 0.413203 | 5.3:-72783284 | None:intergenic |
| ACTGGAACAAGAAAAGAATA+AGG | 0.414135 | 5.3:+72781331 | MS.gene47683:CDS |
| AAATTAGGTTGTCTAAAGAT+TGG | 0.418099 | 5.3:+72781919 | MS.gene47683:CDS |
| GTATGCAGCTGATTTATTGC+AGG | 0.422049 | 5.3:-72782973 | None:intergenic |
| CATCGGGGATGCAACGGGGA+TGG | 0.424317 | 5.3:+72781167 | MS.gene47683:CDS |
| TGCAATTGCATGCTTGCTCT+TGG | 0.425841 | 5.3:+72783050 | MS.gene47683:CDS |
| CCTTATTGATATCGTGTCAT+TGG | 0.427463 | 5.3:+72783284 | MS.gene47683:CDS |
| CGCATCTCTTCCACGAAAGC+AGG | 0.427932 | 5.3:+72785423 | MS.gene47683:CDS |
| TATTAACACTTGCTGCGAAC+AGG | 0.428860 | 5.3:+72780619 | MS.gene47683:CDS |
| AAGAGAAAAGCCTGCTTTCG+TGG | 0.429189 | 5.3:-72785433 | None:intergenic |
| CTTGTATAGCTGAGAGGGAC+AGG | 0.429483 | 5.3:+72781222 | MS.gene47683:CDS |
| ATTGTACTTCTCGGTAAACT+TGG | 0.433908 | 5.3:+72783793 | MS.gene47683:CDS |
| CAGTGAAACCAACCTTTGCT+TGG | 0.435279 | 5.3:-72782014 | None:intergenic |
| AGCAGCTAGCAGAAGATAAG+AGG | 0.445083 | 5.3:+72781686 | MS.gene47683:CDS |
| CTCGTCGGACATGGCAGTGC+CGG | 0.445452 | 5.3:+72780568 | None:intergenic |
| CCTGAGAAATCAAACTGAAA+TGG | 0.447150 | 5.3:+72781750 | MS.gene47683:CDS |
| TCTACGTCACTTTGATGTAC+TGG | 0.457048 | 5.3:+72781954 | MS.gene47683:CDS |
| AGATTGTTACTTCTGCTCAT+CGG | 0.461787 | 5.3:+72781150 | MS.gene47683:intron |
| ATGTTGAAACTTTGAGGAAG+TGG | 0.470980 | 5.3:+72785562 | MS.gene47683:CDS |
| TTCAGGATTGGAGTTGATAA+CGG | 0.477336 | 5.3:+72785342 | MS.gene47683:intron |
| GTCTCTAGTTATGTTGCTTG+AGG | 0.478013 | 5.3:+72782915 | MS.gene47683:intron |
| TATCGTGTCATTGGTGGAAC+TGG | 0.478151 | 5.3:+72783293 | MS.gene47683:CDS |
| TCTCTAGTTATGTTGCTTGA+GGG | 0.479192 | 5.3:+72782916 | MS.gene47683:CDS |
| GGAGTTGATAACGGTGGATA+CGG | 0.485991 | 5.3:+72785351 | MS.gene47683:CDS |
| CGGTTGTTTGAAAAGATGCC+TGG | 0.489614 | 5.3:+72783215 | MS.gene47683:CDS |
| CTCTAATTTAACCATCTCAA+TGG | 0.491110 | 5.3:-72781590 | None:intergenic |
| AAGAAAAGCCGAGTTAGAAA+TGG | 0.492223 | 5.3:+72781525 | MS.gene47683:CDS |
| TTAGATTCTGGATTAATGCC+AGG | 0.498309 | 5.3:+72783120 | MS.gene47683:CDS |
| CATTTCAGTTTGATTTCTCA+GGG | 0.502026 | 5.3:-72781749 | None:intergenic |
| AACGGTGGATACGGAGATCA+AGG | 0.503959 | 5.3:+72785360 | MS.gene47683:CDS |
| TCAAGCAAGTCGAGCAGCAG+AGG | 0.509411 | 5.3:-72783736 | None:intergenic |
| AGATAACTGGAACAAGTTTG+TGG | 0.518705 | 5.3:+72781633 | MS.gene47683:CDS |
| TGTCGAACATTATCATTGCC+TGG | 0.519307 | 5.3:-72783138 | None:intergenic |
| TGGAAGAGATAAAGAACTGT+TGG | 0.520480 | 5.3:+72783070 | MS.gene47683:CDS |
| GGAACTGGTAGCAAACGAAA+TGG | 0.527388 | 5.3:+72783308 | MS.gene47683:CDS |
| CAGGGAAATCTGTAGATTGA+AGG | 0.527681 | 5.3:+72781241 | MS.gene47683:CDS |
| TAAAGAACTGTTGGCTCCAA+GGG | 0.528818 | 5.3:+72783079 | MS.gene47683:CDS |
| TATTGATATCGTGTCATTGG+TGG | 0.528862 | 5.3:+72783287 | MS.gene47683:CDS |
| GGACATGGCAGTGCCGGTGG+CGG | 0.536280 | 5.3:+72780574 | None:intergenic |
| AAAAGCTAACGAAAAGTTGA+AGG | 0.536384 | 5.3:+72781549 | MS.gene47683:CDS |
| ATAAAGAACTGTTGGCTCCA+AGG | 0.538367 | 5.3:+72783078 | MS.gene47683:CDS |
| TGATTTATTGCAGGAAGACA+AGG | 0.538740 | 5.3:-72782964 | None:intergenic |
| TCCCAATACAGAGCTGGCAC+TGG | 0.539914 | 5.3:+72783695 | MS.gene47683:intron |
| GGTTAAATTAGAGGAGCAGA+AGG | 0.543577 | 5.3:+72781600 | MS.gene47683:CDS |
| AAGAACGACAAAGAGTGTAT+TGG | 0.546568 | 5.3:-72785469 | None:intergenic |
| AGAGAAGGGCTGATTCTAAG+AGG | 0.557315 | 5.3:+72781282 | MS.gene47683:CDS |
| TCTGCTCATCGGGGATGCAA+CGG | 0.558030 | 5.3:+72781161 | MS.gene47683:CDS |
| TACTTCTCGGTAAACTTGGA+AGG | 0.566366 | 5.3:+72783797 | MS.gene47683:CDS |
| CACATCATTATTCTTGTCAG+TGG | 0.569862 | 5.3:-72783190 | None:intergenic |
| ATTAAAGTGGAGAAGGCTGA+GGG | 0.570181 | 5.3:+72781371 | MS.gene47683:CDS |
| GTCGGACATGGCAGTGCCGG+TGG | 0.571110 | 5.3:+72780571 | None:intergenic |
| AGAAGATAAGAGGACAATTG+AGG | 0.575896 | 5.3:+72781696 | MS.gene47683:CDS |
| TTTGGAGAGTGAAAAGAGAA+GGG | 0.578977 | 5.3:+72781268 | MS.gene47683:CDS |
| GACAAAGAGTGTATTGGCAG+TGG | 0.584750 | 5.3:-72785463 | None:intergenic |
| GACAAGAATAATGATGTGTC+CGG | 0.586527 | 5.3:+72783195 | MS.gene47683:CDS |
| AATTAAAGTGGAGAAGGCTG+AGG | 0.598799 | 5.3:+72781370 | MS.gene47683:CDS |
| ACGAGCTTGTATAGCTGAGA+GGG | 0.600679 | 5.3:+72781217 | MS.gene47683:CDS |
| AAGGAGCAGTAACATCGGAT+AGG | 0.611277 | 5.3:-72782945 | None:intergenic |
| AAAGCACAAAGCCATTGAGA+TGG | 0.613517 | 5.3:+72781579 | MS.gene47683:CDS |
| CGCAGCAAGTGTTAATAATG+GGG | 0.613845 | 5.3:-72780613 | None:intergenic |
| TTGTATAGCTGAGAGGGACA+GGG | 0.623146 | 5.3:+72781223 | MS.gene47683:CDS |
| GGATGGGGACGAGAATGAGA+AGG | 0.624011 | 5.3:+72781184 | MS.gene47683:CDS |
| AGGATTGGAGTTGATAACGG+TGG | 0.627045 | 5.3:+72785345 | MS.gene47683:intron |
| ACAACGGTCTAATGAAGAAG+TGG | 0.629540 | 5.3:+72783158 | MS.gene47683:CDS |
| GGACAATTGAGGATTTGAAG+CGG | 0.630311 | 5.3:+72781707 | MS.gene47683:CDS |
| TGCTCATCGGGGATGCAACG+GGG | 0.636567 | 5.3:+72781163 | MS.gene47683:CDS |
| CTGCTTTCGTGGAAGAGATG+CGG | 0.640184 | 5.3:-72785422 | None:intergenic |
| CTTGCTTGACACATGTGTAG+AGG | 0.645856 | 5.3:+72783750 | MS.gene47683:CDS |
| ATGACATTCTTAAGAGCATG+TGG | 0.657389 | 5.3:-72783252 | None:intergenic |
| AAAAGGGTTTCAAGACCAAG+AGG | 0.659478 | 5.3:-72785492 | None:intergenic |
| TACGAGCTTGTATAGCTGAG+AGG | 0.660649 | 5.3:+72781216 | MS.gene47683:CDS |
| GTGGTCGAGTATCAGAAACC+AGG | 0.666373 | 5.3:-72783233 | None:intergenic |
| CGATATCAATAAGGTGACAG+AGG | 0.669636 | 5.3:-72783275 | None:intergenic |
| ATTGTTACTTCTGCTCATCG+GGG | 0.682964 | 5.3:+72781152 | MS.gene47683:CDS |
| AAGACAAGGAGCAGTAACAT+CGG | 0.690748 | 5.3:-72782950 | None:intergenic |
| AAGTACACAAGACCAAGCAA+AGG | 0.709310 | 5.3:+72782002 | MS.gene47683:CDS |
| TGTGGAAGAGAAATGTCGTG+CGG | 0.716063 | 5.3:+72781651 | MS.gene47683:CDS |
| TTAAAGTGGAGAAGGCTGAG+GGG | 0.718891 | 5.3:+72781372 | MS.gene47683:CDS |
| GCAATGATAATGTTCGACAA+CGG | 0.731836 | 5.3:+72783142 | MS.gene47683:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTCAAAAATATGAAAT+TGG | + | chr5.3:72783472-72783491 | MS.gene47683:intron | 10.0% |
| !! | ATAAAACTTTACTTAATTAA+AGG | - | chr5.3:72782495-72782514 | None:intergenic | 10.0% |
| !! | ATATACATAATTTAAAAAAC+AGG | - | chr5.3:72783366-72783385 | None:intergenic | 10.0% |
| !! | ATTAAAATAAAATAAAACTG+GGG | + | chr5.3:72785207-72785226 | MS.gene47683:intron | 10.0% |
| !! | TAAAACTTTACTTAATTAAA+GGG | - | chr5.3:72782494-72782513 | None:intergenic | 10.0% |
| !! | TATACATAATTTAAAAAACA+GGG | - | chr5.3:72783365-72783384 | None:intergenic | 10.0% |
| !!! | TAACTTCATTAATTTTTTAA+AGG | - | chr5.3:72782582-72782601 | None:intergenic | 10.0% |
| !!! | TTGTAAATTTTATAAATTTC+AGG | + | chr5.3:72785325-72785344 | MS.gene47683:intron | 10.0% |
| !!! | TTTATTTTAATTTAGAATGA+TGG | - | chr5.3:72785198-72785217 | None:intergenic | 10.0% |
| !!! | TTTTGAAGAATAAAAAAAAT+GGG | - | chr5.3:72784633-72784652 | None:intergenic | 10.0% |
| !!! | TTTTTGAAGAATAAAAAAAA+TGG | - | chr5.3:72784634-72784653 | None:intergenic | 10.0% |
| !! | AAAAATAATTAATGTTGCAT+TGG | - | chr5.3:72784153-72784172 | None:intergenic | 15.0% |
| !! | TATATATGTGAAAATAGTAT+TGG | + | chr5.3:72784531-72784550 | MS.gene47683:intron | 15.0% |
| !! | TTAAAATAAAATAAAACTGG+GGG | + | chr5.3:72785208-72785227 | MS.gene47683:intron | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | - | chr5.3:72784178-72784197 | None:intergenic | 15.0% |
| !!! | AATTTTATAAATTTCAGGAT+TGG | + | chr5.3:72785330-72785349 | MS.gene47683:intron | 15.0% |
| !!! | ATTAATTGTGTTAATTTTGA+TGG | - | chr5.3:72784273-72784292 | None:intergenic | 15.0% |
| !!! | GATAAGATTAAGTTTTTATA+TGG | + | chr5.3:72783576-72783595 | MS.gene47683:intron | 15.0% |
| !!! | TATTTTTTTTAATGTAAAGG+AGG | + | chr5.3:72784911-72784930 | MS.gene47683:intron | 15.0% |
| !!! | TTATTGATTTTTTGTATAAC+TGG | - | chr5.3:72784039-72784058 | None:intergenic | 15.0% |
| !! | AAATATATTAACGTCAAAAG+GGG | - | chr5.3:72780663-72780682 | None:intergenic | 20.0% |
| !! | AATATGTTTATAAACCCAAA+AGG | - | chr5.3:72782287-72782306 | None:intergenic | 20.0% |
| !! | ATAGATGTTAGTATGAAAAA+GGG | - | chr5.3:72785511-72785530 | None:intergenic | 20.0% |
| !! | CAAATATATTAACGTCAAAA+GGG | - | chr5.3:72780664-72780683 | None:intergenic | 20.0% |
| !! | CACTCATAGTAATAAATATA+TGG | + | chr5.3:72783523-72783542 | MS.gene47683:intron | 20.0% |
| !! | CTAAATATAACTATAGTTCA+GGG | - | chr5.3:72780976-72780995 | None:intergenic | 20.0% |
| !! | CTGATAGTAATTTGATAAAA+TGG | + | chr5.3:72780846-72780865 | MS.gene47683:intron | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | - | chr5.3:72784189-72784208 | None:intergenic | 20.0% |
| !! | GTAGACATATTTATGAATAT+AGG | + | chr5.3:72783875-72783894 | MS.gene47683:intron | 20.0% |
| !! | TCAAATATATTAACGTCAAA+AGG | - | chr5.3:72780665-72780684 | None:intergenic | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | - | chr5.3:72784190-72784209 | None:intergenic | 20.0% |
| !! | TTATGAATATAGGATATATG+AGG | + | chr5.3:72783885-72783904 | MS.gene47683:intron | 20.0% |
| !!! | AAGTTAACTACTTTTCTTAA+AGG | + | chr5.3:72782596-72782615 | MS.gene47683:intron | 20.0% |
| !!! | ACTTAATTAAAGGGTATTTT+AGG | - | chr5.3:72782485-72782504 | None:intergenic | 20.0% |
| !!! | AGTATTTTACATCACAAATT+AGG | + | chr5.3:72781904-72781923 | MS.gene47683:CDS | 20.0% |
| !!! | AGTTAACTACTTTTCTTAAA+GGG | + | chr5.3:72782597-72782616 | MS.gene47683:intron | 20.0% |
| !!! | ATTATTTTGAGAAGAAAAAG+TGG | - | chr5.3:72784115-72784134 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTCAAAAACACA+GGG | + | chr5.3:72784638-72784657 | MS.gene47683:intron | 20.0% |
| !!! | TTTTGCTTATATATTAAACC+AGG | + | chr5.3:72782636-72782655 | MS.gene47683:intron | 20.0% |
| !!! | TTTTTATTCTTCAAAAACAC+AGG | + | chr5.3:72784637-72784656 | MS.gene47683:intron | 20.0% |
| !!! | TTTTTTGACATGGATAATTT+TGG | + | chr5.3:72782871-72782890 | MS.gene47683:intron | 20.0% |
| ! | AAAAACTTAATCTTATCCCT+TGG | - | chr5.3:72783573-72783592 | None:intergenic | 25.0% |
| ! | AAACGACTATTATTTAGAGA+CGG | + | chr5.3:72784322-72784341 | MS.gene47683:intron | 25.0% |
| ! | AATAAGTGAATTGTTACCAA+GGG | + | chr5.3:72783554-72783573 | MS.gene47683:intron | 25.0% |
| ! | ATTTATAGCAACTAACACAA+AGG | - | chr5.3:72784685-72784704 | None:intergenic | 25.0% |
| ! | CAGAATCTAACAAATCAATT+TGG | - | chr5.3:72783110-72783129 | None:intergenic | 25.0% |
| ! | CATTTCGAAACTTAACAAAT+GGG | - | chr5.3:72784886-72784905 | None:intergenic | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | chr5.3:72784221-72784240 | MS.gene47683:intron | 25.0% |
| ! | CTCTAAATAATAGTCGTTTA+AGG | - | chr5.3:72784321-72784340 | None:intergenic | 25.0% |
| ! | GATAGATGTTAGTATGAAAA+AGG | - | chr5.3:72785512-72785531 | None:intergenic | 25.0% |
| ! | GCAAATTGCAAAAATTAAAG+TGG | + | chr5.3:72781358-72781377 | MS.gene47683:CDS | 25.0% |
| ! | GCTAAATATAACTATAGTTC+AGG | - | chr5.3:72780977-72780996 | None:intergenic | 25.0% |
| ! | TACTTACATGATTAAGGTAT+AGG | + | chr5.3:72782201-72782220 | MS.gene47683:intron | 25.0% |
| ! | TCATTTCGAAACTTAACAAA+TGG | - | chr5.3:72784887-72784906 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | chr5.3:72784220-72784239 | MS.gene47683:intron | 25.0% |
| ! | TTTGGAAAATGGTAATCTTA+AGG | + | chr5.3:72782335-72782354 | MS.gene47683:intron | 25.0% |
| !! | AAATTAGGTTGTCTAAAGAT+TGG | + | chr5.3:72781919-72781938 | MS.gene47683:CDS | 25.0% |
| !! | AGTTAGTGGAGTATTTAAAT+TGG | - | chr5.3:72784210-72784229 | None:intergenic | 25.0% |
| !! | ATTATTTAAAATACCCCTCA+TGG | - | chr5.3:72782540-72782559 | None:intergenic | 25.0% |
| !! | TAATGTCACTTGTCATTAAA+GGG | - | chr5.3:72783417-72783436 | None:intergenic | 25.0% |
| !! | TGGTTATGTTTCTAAAAGAA+AGG | - | chr5.3:72784445-72784464 | None:intergenic | 25.0% |
| !! | TTAAGATTACCATTTTCCAA+AGG | - | chr5.3:72782336-72782355 | None:intergenic | 25.0% |
| !! | TTAATGTCACTTGTCATTAA+AGG | - | chr5.3:72783418-72783437 | None:intergenic | 25.0% |
| !! | TTATTTAAAATACCCCTCAT+GGG | - | chr5.3:72782539-72782558 | None:intergenic | 25.0% |
| !!! | CAAATTGATTTGTTAGATTC+TGG | + | chr5.3:72783108-72783127 | MS.gene47683:CDS | 25.0% |
| !!! | TGCAAAACATGATTTTTTTG+TGG | - | chr5.3:72782409-72782428 | None:intergenic | 25.0% |
| !!! | TTAACTTGTTATAGGATATG+TGG | + | chr5.3:72782691-72782710 | MS.gene47683:intron | 25.0% |
| !!! | TTCAGTTGTTAACTTGTTAT+AGG | + | chr5.3:72782683-72782702 | MS.gene47683:intron | 25.0% |
| !!! | TTCTAACTTGTATTTTAGCT+TGG | - | chr5.3:72781872-72781891 | None:intergenic | 25.0% |
| AAAAGCTAACGAAAAGTTGA+AGG | + | chr5.3:72781549-72781568 | MS.gene47683:CDS | 30.0% | |
| AATAAAATAAAACTGGGGGT+AGG | + | chr5.3:72785212-72785231 | MS.gene47683:intron | 30.0% | |
| AATAGAACAATTTCCCATGA+GGG | + | chr5.3:72782523-72782542 | MS.gene47683:intron | 30.0% | |
| ACAACTGTGAACTAGAATTA+TGG | - | chr5.3:72783498-72783517 | None:intergenic | 30.0% | |
| ACGGTTAATGTCAAAAACAT+AGG | - | chr5.3:72780760-72780779 | None:intergenic | 30.0% | |
| ACTGGAACAAGAAAAGAATA+AGG | + | chr5.3:72781331-72781350 | MS.gene47683:CDS | 30.0% | |
| AGGTTTATGCACGATTATTA+AGG | - | chr5.3:72784301-72784320 | None:intergenic | 30.0% | |
| AGTACATATGCCTCAAAAAA+AGG | - | chr5.3:72784469-72784488 | None:intergenic | 30.0% | |
| ATACTAGAACCTAATTCCTT+GGG | + | chr5.3:72783666-72783685 | MS.gene47683:intron | 30.0% | |
| ATATCGAGCTCAAATTTGAA+AGG | + | chr5.3:72783382-72783401 | MS.gene47683:intron | 30.0% | |
| ATATTAGCAGTAACACTGAA+AGG | + | chr5.3:72782302-72782321 | MS.gene47683:intron | 30.0% | |
| ATTGGAAGAATTTAATGCTG+GGG | + | chr5.3:72781088-72781107 | MS.gene47683:intron | 30.0% | |
| CATCATGTGTTAAATCAGAT+GGG | - | chr5.3:72785267-72785286 | None:intergenic | 30.0% | |
| CATTGAGATGGTTAAATTAG+AGG | + | chr5.3:72781591-72781610 | MS.gene47683:CDS | 30.0% | |
| CCATAACTATAGATACAAGA+TGG | + | chr5.3:72784774-72784793 | MS.gene47683:intron | 30.0% | |
| CCATCTTGTATCTATAGTTA+TGG | - | chr5.3:72784777-72784796 | None:intergenic | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | - | chr5.3:72784224-72784243 | None:intergenic | 30.0% | |
| CTCTAATTTAACCATCTCAA+TGG | - | chr5.3:72781593-72781612 | None:intergenic | 30.0% | |
| CTCTTGATTACAGAGTTTAA+AGG | + | chr5.3:72785097-72785116 | MS.gene47683:intron | 30.0% | |
| GAATAAGTGAATTGTTACCA+AGG | + | chr5.3:72783553-72783572 | MS.gene47683:intron | 30.0% | |
| GATAGTTGCCAATTATTAGA+AGG | + | chr5.3:72783012-72783031 | MS.gene47683:CDS | 30.0% | |
| GATCAACAAATATTGCTATC+TGG | + | chr5.3:72785603-72785622 | MS.gene47683:CDS | 30.0% | |
| GATTGGAAGAATTTAATGCT+GGG | + | chr5.3:72781087-72781106 | MS.gene47683:intron | 30.0% | |
| GTGATTATTTGCTTGTTCTA+TGG | + | chr5.3:72784403-72784422 | MS.gene47683:intron | 30.0% | |
| TAATAGAACAATTTCCCATG+AGG | + | chr5.3:72782522-72782541 | MS.gene47683:intron | 30.0% | |
| TAATGAAATGCGTTGTAATG+CGG | + | chr5.3:72781010-72781029 | MS.gene47683:intron | 30.0% | |
| TAGACAATGTTGAAACTTTG+AGG | + | chr5.3:72785556-72785575 | MS.gene47683:CDS | 30.0% | |
| TAGAGACAATTATTGTGAGA+CGG | - | chr5.3:72784092-72784111 | None:intergenic | 30.0% | |
| TATGCTTATCATGAAAGTGA+GGG | + | chr5.3:72783914-72783933 | MS.gene47683:intron | 30.0% | |
| TCATCATGTGTTAAATCAGA+TGG | - | chr5.3:72785268-72785287 | None:intergenic | 30.0% | |
| TGATTGGAAGAATTTAATGC+TGG | + | chr5.3:72781086-72781105 | MS.gene47683:intron | 30.0% | |
| TGCAAAAATTAAAGTGGAGA+AGG | + | chr5.3:72781364-72781383 | MS.gene47683:CDS | 30.0% | |
| TTCATAGAGTGGTACATATA+CGG | + | chr5.3:72780812-72780831 | MS.gene47683:intron | 30.0% | |
| TTGTGGCTTATATTCAAAAC+CGG | - | chr5.3:72782392-72782411 | None:intergenic | 30.0% | |
| TTGTGTTCTTCTCATTCTTA+TGG | + | chr5.3:72783606-72783625 | MS.gene47683:intron | 30.0% | |
| ! | AATCAATTTGGTTTATCCCT+TGG | - | chr5.3:72783098-72783117 | None:intergenic | 30.0% |
| ! | AGTCTCTTAGATTTTGCAAA+TGG | + | chr5.3:72782790-72782809 | MS.gene47683:intron | 30.0% |
| ! | AGTTATGTCACTTGACAAAA+TGG | - | chr5.3:72784002-72784021 | None:intergenic | 30.0% |
| ! | CATAATTTTGCTTATCTGAG+TGG | + | chr5.3:72782840-72782859 | MS.gene47683:intron | 30.0% |
| ! | CATTTCAGTTTGATTTCTCA+GGG | - | chr5.3:72781752-72781771 | None:intergenic | 30.0% |
| ! | GTCTCTTAGATTTTGCAAAT+GGG | + | chr5.3:72782791-72782810 | MS.gene47683:intron | 30.0% |
| ! | TATTTCTGTCCAACTCAAAA+AGG | - | chr5.3:72785175-72785194 | None:intergenic | 30.0% |
| ! | TGTAAATTACGAGACCTTTT+GGG | + | chr5.3:72782270-72782289 | MS.gene47683:intron | 30.0% |
| ! | TTGTAAATTACGAGACCTTT+TGG | + | chr5.3:72782269-72782288 | MS.gene47683:intron | 30.0% |
| ! | TTTTGTCAAGTGACATAACT+TGG | + | chr5.3:72784002-72784021 | MS.gene47683:intron | 30.0% |
| !! | TACTTTTCTTAAAGGGTGTA+AGG | + | chr5.3:72782604-72782623 | MS.gene47683:intron | 30.0% |
| !!! | ACATAACCAACCTTTTTTTG+AGG | + | chr5.3:72784456-72784475 | MS.gene47683:intron | 30.0% |
| !!! | GCATATTTTTTGTCTGTTTC+TGG | + | chr5.3:72781979-72781998 | MS.gene47683:CDS | 30.0% |
| !!! | GCTTTAGTTTTTCGTTTTTG+GGG | + | chr5.3:72782713-72782732 | MS.gene47683:intron | 30.0% |
| !!! | GGCTTTAGTTTTTCGTTTTT+GGG | + | chr5.3:72782712-72782731 | MS.gene47683:intron | 30.0% |
| !!! | TCACTTTAAACGTGTTGTTT+TGG | - | chr5.3:72785011-72785030 | None:intergenic | 30.0% |
| !!! | TGACATGGATAATTTTGGTT+TGG | + | chr5.3:72782876-72782895 | MS.gene47683:intron | 30.0% |
| !!! | TGGCTTTAGTTTTTCGTTTT+TGG | + | chr5.3:72782711-72782730 | MS.gene47683:intron | 30.0% |
| AAGAAAAGCCGAGTTAGAAA+TGG | + | chr5.3:72781525-72781544 | MS.gene47683:CDS | 35.0% | |
| ACGCCTTCATAAAAATGAGT+GGG | - | chr5.3:72785136-72785155 | None:intergenic | 35.0% | |
| ACTTGACAAAATGGTCATCA+CGG | - | chr5.3:72783993-72784012 | None:intergenic | 35.0% | |
| AGAAGATAAGAGGACAATTG+AGG | + | chr5.3:72781696-72781715 | MS.gene47683:CDS | 35.0% | |
| AGATAACTGGAACAAGTTTG+TGG | + | chr5.3:72781633-72781652 | MS.gene47683:CDS | 35.0% | |
| AGCCAAAACAACACGTTTAA+AGG | + | chr5.3:72785006-72785025 | MS.gene47683:intron | 35.0% | |
| AGGGGAAATATGTGATCATT+TGG | + | chr5.3:72783933-72783952 | MS.gene47683:intron | 35.0% | |
| ATAGAACAATTTCCCATGAG+GGG | + | chr5.3:72782524-72782543 | MS.gene47683:intron | 35.0% | |
| ATATTAACGTCAAAAGGGGT+AGG | - | chr5.3:72780659-72780678 | None:intergenic | 35.0% | |
| ATGCTTATCATGAAAGTGAG+GGG | + | chr5.3:72783915-72783934 | MS.gene47683:intron | 35.0% | |
| ATTCAGCGCCTTCTAATAAT+TGG | - | chr5.3:72783023-72783042 | None:intergenic | 35.0% | |
| ATTGTACTTCTCGGTAAACT+TGG | + | chr5.3:72783793-72783812 | MS.gene47683:CDS | 35.0% | |
| CACATCATTATTCTTGTCAG+TGG | - | chr5.3:72783193-72783212 | None:intergenic | 35.0% | |
| CATACTAGAACCTAATTCCT+TGG | + | chr5.3:72783665-72783684 | MS.gene47683:intron | 35.0% | |
| CATATGCCTCAAAAAAAGGT+TGG | - | chr5.3:72784465-72784484 | None:intergenic | 35.0% | |
| CCAATGACACGATATCAATA+AGG | - | chr5.3:72783287-72783306 | None:intergenic | 35.0% | |
| CCTGAGAAATCAAACTGAAA+TGG | + | chr5.3:72781750-72781769 | MS.gene47683:CDS | 35.0% | |
| CCTTATTGATATCGTGTCAT+TGG | + | chr5.3:72783284-72783303 | MS.gene47683:CDS | 35.0% | |
| CTGGCATACTTACATGATTA+AGG | + | chr5.3:72782195-72782214 | MS.gene47683:intron | 35.0% | |
| GAATACATTATGACATCGTG+TGG | + | chr5.3:72783632-72783651 | MS.gene47683:intron | 35.0% | |
| GACAAGAATAATGATGTGTC+CGG | + | chr5.3:72783195-72783214 | MS.gene47683:CDS | 35.0% | |
| GACTATTATTTAGAGACGGA+GGG | + | chr5.3:72784326-72784345 | MS.gene47683:intron | 35.0% | |
| GATATATCTCCTAAACGATG+AGG | + | chr5.3:72784354-72784373 | MS.gene47683:intron | 35.0% | |
| GGGATAATACTAAGTCGTAT+TGG | + | chr5.3:72784596-72784615 | MS.gene47683:intron | 35.0% | |
| GGTTTATATGCTTCATAGAG+TGG | + | chr5.3:72780801-72780820 | MS.gene47683:intron | 35.0% | |
| GTATGCTTATCATGAAAGTG+AGG | + | chr5.3:72783913-72783932 | MS.gene47683:intron | 35.0% | |
| GTGATGTGAAAATCGAAACT+GGG | + | chr5.3:72781060-72781079 | MS.gene47683:intron | 35.0% | |
| GTTGCTATCATTGTACTTCT+CGG | + | chr5.3:72783784-72783803 | MS.gene47683:CDS | 35.0% | |
| TAACTCAATCCTCATCGTTT+AGG | - | chr5.3:72784366-72784385 | None:intergenic | 35.0% | |
| TCAAGCTCAACTAGTAATAC+TGG | - | chr5.3:72784492-72784511 | None:intergenic | 35.0% | |
| TCGCAGCAAGTGTTAATAAT+GGG | - | chr5.3:72780617-72780636 | None:intergenic | 35.0% | |
| TGATGTGAAAATCGAAACTG+GGG | + | chr5.3:72781061-72781080 | MS.gene47683:intron | 35.0% | |
| TGATTTATTGCAGGAAGACA+AGG | - | chr5.3:72782967-72782986 | None:intergenic | 35.0% | |
| TGGAAGAGATAAAGAACTGT+TGG | + | chr5.3:72783070-72783089 | MS.gene47683:CDS | 35.0% | |
| TGTGATGTGAAAATCGAAAC+TGG | + | chr5.3:72781059-72781078 | MS.gene47683:intron | 35.0% | |
| TTAGATTCTGGATTAATGCC+AGG | + | chr5.3:72783120-72783139 | MS.gene47683:CDS | 35.0% | |
| TTCCAGTAACTTCCAAGTTT+CGG | - | chr5.3:72781318-72781337 | None:intergenic | 35.0% | |
| TTCGCAGCAAGTGTTAATAA+TGG | - | chr5.3:72780618-72780637 | None:intergenic | 35.0% | |
| TTGCAAATGGGATTCTCTAA+TGG | + | chr5.3:72782803-72782822 | MS.gene47683:intron | 35.0% | |
| TTTGGAGAGTGAAAAGAGAA+GGG | + | chr5.3:72781268-72781287 | MS.gene47683:CDS | 35.0% | |
| ! | AAGAACGACAAAGAGTGTAT+TGG | - | chr5.3:72785472-72785491 | None:intergenic | 35.0% |
| ! | AGATTGTTACTTCTGCTCAT+CGG | + | chr5.3:72781150-72781169 | MS.gene47683:intron | 35.0% |
| ! | AGTTTTCACACTGATGTCAA+CGG | - | chr5.3:72781776-72781795 | None:intergenic | 35.0% |
| ! | ATGACATTCTTAAGAGCATG+TGG | - | chr5.3:72783255-72783274 | None:intergenic | 35.0% |
| ! | ATGTTGAAACTTTGAGGAAG+TGG | + | chr5.3:72785562-72785581 | MS.gene47683:CDS | 35.0% |
| ! | CCATTTCAGTTTGATTTCTC+AGG | - | chr5.3:72781753-72781772 | None:intergenic | 35.0% |
| ! | CTTTTATGTGCGTGATTTTG+TGG | + | chr5.3:72782746-72782765 | MS.gene47683:intron | 35.0% |
| ! | GCAATGATAATGTTCGACAA+CGG | + | chr5.3:72783142-72783161 | MS.gene47683:CDS | 35.0% |
| ! | GTTATCTTGCCTTTGGAAAA+TGG | + | chr5.3:72782324-72782343 | MS.gene47683:intron | 35.0% |
| ! | GTTGGTTGACTCACTTTAAA+AGG | - | chr5.3:72784971-72784990 | None:intergenic | 35.0% |
| ! | TATTGATATCGTGTCATTGG+TGG | + | chr5.3:72783287-72783306 | MS.gene47683:CDS | 35.0% |
| ! | TCTCTAGTTATGTTGCTTGA+GGG | + | chr5.3:72782916-72782935 | MS.gene47683:CDS | 35.0% |
| !! | ACACCCACTCATTTTTATGA+AGG | + | chr5.3:72785130-72785149 | MS.gene47683:intron | 35.0% |
| !! | AGCTTTTGCCATTTCTAACT+CGG | - | chr5.3:72781536-72781555 | None:intergenic | 35.0% |
| !! | TTCAGGATTGGAGTTGATAA+CGG | + | chr5.3:72785342-72785361 | MS.gene47683:intron | 35.0% |
| !! | TTTTGGAGAGTGAAAAGAGA+AGG | + | chr5.3:72781267-72781286 | MS.gene47683:CDS | 35.0% |
| !!! | CATGGATAATTTTGGTTTGG+TGG | + | chr5.3:72782879-72782898 | MS.gene47683:intron | 35.0% |
| !!! | GGACAGAAGTTTTTTTGACA+TGG | + | chr5.3:72782861-72782880 | MS.gene47683:intron | 35.0% |
| !!! | TGCCTTTAAACGTGTTGTTT+TGG | - | chr5.3:72785061-72785080 | None:intergenic | 35.0% |
| !!! | TGTTGTTTTGGCTTGTAGTA+TGG | - | chr5.3:72784999-72785018 | None:intergenic | 35.0% |
| AAAAGGGTTTCAAGACCAAG+AGG | - | chr5.3:72785495-72785514 | None:intergenic | 40.0% | |
| AAAGCACAAAGCCATTGAGA+TGG | + | chr5.3:72781579-72781598 | MS.gene47683:CDS | 40.0% | |
| AAGACAAGGAGCAGTAACAT+CGG | - | chr5.3:72782953-72782972 | None:intergenic | 40.0% | |
| AAGTACACAAGACCAAGCAA+AGG | + | chr5.3:72782002-72782021 | MS.gene47683:CDS | 40.0% | |
| AATTAAAGTGGAGAAGGCTG+AGG | + | chr5.3:72781370-72781389 | MS.gene47683:CDS | 40.0% | |
| ACAACGGTCTAATGAAGAAG+TGG | + | chr5.3:72783158-72783177 | MS.gene47683:CDS | 40.0% | |
| AGACAATTATTGTGAGACGG+AGG | - | chr5.3:72784089-72784108 | None:intergenic | 40.0% | |
| ATTAAAGTGGAGAAGGCTGA+GGG | + | chr5.3:72781371-72781390 | MS.gene47683:CDS | 40.0% | |
| CAAAAACACAGGGAGCTATA+AGG | + | chr5.3:72784648-72784667 | MS.gene47683:intron | 40.0% | |
| CAAGCATGCAATTGCATCAA+TGG | - | chr5.3:72783046-72783065 | None:intergenic | 40.0% | |
| CAATGAACAATTACTCCCTC+CGG | + | chr5.3:72782370-72782389 | MS.gene47683:intron | 40.0% | |
| CACGCCTTCATAAAAATGAG+TGG | - | chr5.3:72785137-72785156 | None:intergenic | 40.0% | |
| CAGGGAAATCTGTAGATTGA+AGG | + | chr5.3:72781241-72781260 | MS.gene47683:CDS | 40.0% | |
| CGACTATTATTTAGAGACGG+AGG | + | chr5.3:72784325-72784344 | MS.gene47683:intron | 40.0% | |
| CGATATCAATAAGGTGACAG+AGG | - | chr5.3:72783278-72783297 | None:intergenic | 40.0% | |
| CGCAGCAAGTGTTAATAATG+GGG | - | chr5.3:72780616-72780635 | None:intergenic | 40.0% | |
| CTGAAAGGTTATCTTGCCTT+TGG | + | chr5.3:72782317-72782336 | MS.gene47683:intron | 40.0% | |
| GACAATTATTGTGAGACGGA+GGG | - | chr5.3:72784088-72784107 | None:intergenic | 40.0% | |
| GCTTGTAGTATAGTGTGTGT+TGG | - | chr5.3:72785039-72785058 | None:intergenic | 40.0% | |
| GGACAATTGAGGATTTGAAG+CGG | + | chr5.3:72781707-72781726 | MS.gene47683:CDS | 40.0% | |
| GGCATTAGTGATTGTGAAGT+TGG | + | chr5.3:72782241-72782260 | MS.gene47683:intron | 40.0% | |
| GGCTTATATTCAAAACCGGA+GGG | - | chr5.3:72782388-72782407 | None:intergenic | 40.0% | |
| GGTTAAATTAGAGGAGCAGA+AGG | + | chr5.3:72781600-72781619 | MS.gene47683:CDS | 40.0% | |
| TACTTCTCGGTAAACTTGGA+AGG | + | chr5.3:72783797-72783816 | MS.gene47683:CDS | 40.0% | |
| TCTAAGTGTTCGAAACGTGT+AGG | - | chr5.3:72780914-72780933 | None:intergenic | 40.0% | |
| TGAGCAGAAGTAACAATCTG+AGG | - | chr5.3:72781149-72781168 | None:intergenic | 40.0% | |
| TGGCTTATATTCAAAACCGG+AGG | - | chr5.3:72782389-72782408 | None:intergenic | 40.0% | |
| TGTCGAACATTATCATTGCC+TGG | - | chr5.3:72783141-72783160 | None:intergenic | 40.0% | |
| TTGACATACACTGACACATG+TGG | - | chr5.3:72780888-72780907 | None:intergenic | 40.0% | |
| ! | ACTTTGAGGAAGTGGTTCTT+TGG | + | chr5.3:72785570-72785589 | MS.gene47683:CDS | 40.0% |
| ! | ATTGTTACTTCTGCTCATCG+GGG | + | chr5.3:72781152-72781171 | MS.gene47683:CDS | 40.0% |
| ! | CAGGCATCTTTTCAAACAAC+CGG | - | chr5.3:72783217-72783236 | None:intergenic | 40.0% |
| ! | CTGTAGATTGAAGGAGCTTT+TGG | + | chr5.3:72781250-72781269 | MS.gene47683:CDS | 40.0% |
| ! | CTTTGAGGAAGTGGTTCTTT+GGG | + | chr5.3:72785571-72785590 | MS.gene47683:CDS | 40.0% |
| ! | GATTGTTACTTCTGCTCATC+GGG | + | chr5.3:72781151-72781170 | MS.gene47683:intron | 40.0% |
| ! | GTATGCAGCTGATTTATTGC+AGG | - | chr5.3:72782976-72782995 | None:intergenic | 40.0% |
| ! | GTCTCTAGTTATGTTGCTTG+AGG | + | chr5.3:72782915-72782934 | MS.gene47683:intron | 40.0% |
| ! | TAGGGTTCAGATTGGTCAAT+TGG | + | chr5.3:72781397-72781416 | MS.gene47683:intron | 40.0% |
| ! | TATTAACACTTGCTGCGAAC+AGG | + | chr5.3:72780619-72780638 | MS.gene47683:CDS | 40.0% |
| ! | TCTACGTCACTTTGATGTAC+TGG | + | chr5.3:72781954-72781973 | MS.gene47683:CDS | 40.0% |
| !! | ATAAAGAACTGTTGGCTCCA+AGG | + | chr5.3:72783078-72783097 | MS.gene47683:CDS | 40.0% |
| !! | GACGAGAATGAGAAGGTATT+AGG | + | chr5.3:72781191-72781210 | MS.gene47683:CDS | 40.0% |
| !! | TAAAGAACTGTTGGCTCCAA+GGG | + | chr5.3:72783079-72783098 | MS.gene47683:CDS | 40.0% |
| !! | TAGGACTAGCTATCTATGTC+AGG | + | chr5.3:72782220-72782239 | MS.gene47683:intron | 40.0% |
| AAGAGAAAAGCCTGCTTTCG+TGG | - | chr5.3:72785436-72785455 | None:intergenic | 45.0% | |
| AAGGAGCAGTAACATCGGAT+AGG | - | chr5.3:72782948-72782967 | None:intergenic | 45.0% | |
| AATCGAAACTGGGGAGTGAT+TGG | + | chr5.3:72781070-72781089 | MS.gene47683:intron | 45.0% | |
| ACACAAGACCAAGCAAAGGT+TGG | + | chr5.3:72782006-72782025 | MS.gene47683:intron | 45.0% | |
| ACGAGCTTGTATAGCTGAGA+GGG | + | chr5.3:72781217-72781236 | MS.gene47683:CDS | 45.0% | |
| AGAATTTAATGCTGGGGCAC+CGG | + | chr5.3:72781094-72781113 | MS.gene47683:intron | 45.0% | |
| AGCAGCTAGCAGAAGATAAG+AGG | + | chr5.3:72781686-72781705 | MS.gene47683:CDS | 45.0% | |
| AGGCACTTGCACAAGATAAC+TGG | + | chr5.3:72781620-72781639 | MS.gene47683:CDS | 45.0% | |
| AGTATGCCAGAGTGAGACAA+CGG | - | chr5.3:72782185-72782204 | None:intergenic | 45.0% | |
| CAAAGACATCTGACACGACA+CGG | - | chr5.3:72780779-72780798 | None:intergenic | 45.0% | |
| CACACAAACACACATGAGCT+AGG | + | chr5.3:72782113-72782132 | MS.gene47683:intron | 45.0% | |
| CAGTGAAACCAACCTTTGCT+TGG | - | chr5.3:72782017-72782036 | None:intergenic | 45.0% | |
| CGGTTGTTTGAAAAGATGCC+TGG | + | chr5.3:72783215-72783234 | MS.gene47683:CDS | 45.0% | |
| CTCTTTGTCGTTCTTCCTCT+TGG | + | chr5.3:72785477-72785496 | MS.gene47683:CDS | 45.0% | |
| CTTGCTTGACACATGTGTAG+AGG | + | chr5.3:72783750-72783769 | MS.gene47683:CDS | 45.0% | |
| GCTTGTAGTATGGTGTGTGT+TGG | - | chr5.3:72784989-72785008 | None:intergenic | 45.0% | |
| GGAACTGGTAGCAAACGAAA+TGG | + | chr5.3:72783308-72783327 | MS.gene47683:CDS | 45.0% | |
| GGAAGAAAGTTGCCGAAACT+TGG | + | chr5.3:72781303-72781322 | MS.gene47683:CDS | 45.0% | |
| GTCGTGTCAGATGTCTTTGT+CGG | + | chr5.3:72780780-72780799 | MS.gene47683:intron | 45.0% | |
| TACGAGCTTGTATAGCTGAG+AGG | + | chr5.3:72781216-72781235 | MS.gene47683:CDS | 45.0% | |
| TGAGACGTCTGCGTTTAAAG+CGG | + | chr5.3:72781457-72781476 | MS.gene47683:intron | 45.0% | |
| TGCAATTGCATGCTTGCTCT+TGG | + | chr5.3:72783050-72783069 | MS.gene47683:CDS | 45.0% | |
| TGCCGAAACTTGGAAGTTAC+TGG | + | chr5.3:72781313-72781332 | MS.gene47683:CDS | 45.0% | |
| TGTGGAAGAGAAATGTCGTG+CGG | + | chr5.3:72781651-72781670 | MS.gene47683:CDS | 45.0% | |
| TTAAAGTGGAGAAGGCTGAG+GGG | + | chr5.3:72781372-72781391 | MS.gene47683:CDS | 45.0% | |
| TTGTATAGCTGAGAGGGACA+GGG | + | chr5.3:72781223-72781242 | MS.gene47683:CDS | 45.0% | |
| ! | AGAGAAGGGCTGATTCTAAG+AGG | + | chr5.3:72781282-72781301 | MS.gene47683:CDS | 45.0% |
| ! | GACAAAGAGTGTATTGGCAG+TGG | - | chr5.3:72785466-72785485 | None:intergenic | 45.0% |
| ! | GTGTGTGTGCATGCTTTTGA+CGG | - | chr5.3:72782098-72782117 | None:intergenic | 45.0% |
| ! | TATCGTGTCATTGGTGGAAC+TGG | + | chr5.3:72783293-72783312 | MS.gene47683:CDS | 45.0% |
| ! | TGTGTGTGCATGCTTTTGAC+GGG | - | chr5.3:72782097-72782116 | None:intergenic | 45.0% |
| !! | AGGATTGGAGTTGATAACGG+TGG | + | chr5.3:72785345-72785364 | MS.gene47683:intron | 45.0% |
| !! | AGTGCTGATATATAAGCGCC+TGG | - | chr5.3:72782657-72782676 | None:intergenic | 45.0% |
| !! | GGAGTTGATAACGGTGGATA+CGG | + | chr5.3:72785351-72785370 | MS.gene47683:CDS | 45.0% |
| !!! | CAAGACGCACCTTTTTGAGT+TGG | + | chr5.3:72785163-72785182 | MS.gene47683:intron | 45.0% |
| !!! | GCTTTTAAAATCCTGCCGTC+TGG | - | chr5.3:72781486-72781505 | None:intergenic | 45.0% |
| !! | AAATTAAAATAAAATAAAAC+TGG | + | chr5.3:72785205-72785224 | MS.gene47683:intron | 5.0% |
| !! | AATTAAAATAAAATAAAACT+GGG | + | chr5.3:72785206-72785225 | MS.gene47683:intron | 5.0% |
| !! | ATAAATTAATATATTTGTAT+TGG | + | chr5.3:72780731-72780750 | MS.gene47683:intron | 5.0% |
| !!! | TATTATTTTTTTTAATGTAA+AGG | + | chr5.3:72784908-72784927 | MS.gene47683:intron | 5.0% |
| AACGGTGGATACGGAGATCA+AGG | + | chr5.3:72785360-72785379 | MS.gene47683:CDS | 50.0% | |
| AATCTAGCCCCCAAAGACAC+GGG | + | chr5.3:72784737-72784756 | MS.gene47683:intron | 50.0% | |
| CAATCTAGCCCCCAAAGACA+CGG | + | chr5.3:72784736-72784755 | MS.gene47683:intron | 50.0% | |
| CTGAGTCCATTATTCACCGC+CGG | - | chr5.3:72781116-72781135 | None:intergenic | 50.0% | |
| CTGCTTTCGTGGAAGAGATG+CGG | - | chr5.3:72785425-72785444 | None:intergenic | 50.0% | |
| CTTGTATAGCTGAGAGGGAC+AGG | + | chr5.3:72781222-72781241 | MS.gene47683:CDS | 50.0% | |
| GTGGTCGAGTATCAGAAACC+AGG | - | chr5.3:72783236-72783255 | None:intergenic | 50.0% | |
| TAGAAGCCGTTGTCTCACTC+TGG | + | chr5.3:72782176-72782195 | MS.gene47683:intron | 50.0% | |
| TCCAGTGCCAGCTCTGTATT+GGG | - | chr5.3:72783699-72783718 | None:intergenic | 50.0% | |
| TGCCAGCTCTGTATTGGGAA+AGG | - | chr5.3:72783694-72783713 | None:intergenic | 50.0% | |
| TGCCTTTCCCAATACAGAGC+TGG | + | chr5.3:72783689-72783708 | MS.gene47683:intron | 50.0% | |
| TTATAGCCCCCCGTGTCTTT+GGG | - | chr5.3:72784749-72784768 | None:intergenic | 50.0% | |
| ! | TGTCTTTGGGGGCTAGATTG+AGG | - | chr5.3:72784736-72784755 | None:intergenic | 50.0% |
| !! | CGGCAGGATTTTAAAAGCGC+AGG | + | chr5.3:72781488-72781507 | MS.gene47683:intron | 50.0% |
| !! | GGAAAGGCACCCAAGGAATT+AGG | - | chr5.3:72783678-72783697 | None:intergenic | 50.0% |
| !! | TGTATTGGGAAAGGCACCCA+AGG | - | chr5.3:72783685-72783704 | None:intergenic | 50.0% |
| ATCTAGCCCCCAAAGACACG+GGG | + | chr5.3:72784738-72784757 | MS.gene47683:intron | 55.0% | |
| CAAAGACACGGGGGGCTATA+AGG | + | chr5.3:72784748-72784767 | MS.gene47683:intron | 55.0% | |
| CGCATCTCTTCCACGAAAGC+AGG | + | chr5.3:72785423-72785442 | MS.gene47683:CDS | 55.0% | |
| CTTATAGCCCCCCGTGTCTT+TGG | - | chr5.3:72784750-72784769 | None:intergenic | 55.0% | |
| GGATGGGGACGAGAATGAGA+AGG | + | chr5.3:72781184-72781203 | MS.gene47683:CDS | 55.0% | |
| GTCCAGTGCCAGCTCTGTAT+TGG | - | chr5.3:72783700-72783719 | None:intergenic | 55.0% | |
| TATAGCCCCCCGTGTCTTTG+GGG | - | chr5.3:72784748-72784767 | None:intergenic | 55.0% | |
| TCAAGCAAGTCGAGCAGCAG+AGG | - | chr5.3:72783739-72783758 | None:intergenic | 55.0% | |
| TCCCAATACAGAGCTGGCAC+TGG | + | chr5.3:72783695-72783714 | MS.gene47683:intron | 55.0% | |
| TCTGCTCATCGGGGATGCAA+CGG | + | chr5.3:72781161-72781180 | MS.gene47683:CDS | 55.0% | |
| ! | GACGTCTGCGTTTAAAGCGG+CGG | + | chr5.3:72781460-72781479 | MS.gene47683:intron | 55.0% |
| ! | GAGGGGTGTAGGGTTCAGAT+TGG | + | chr5.3:72781389-72781408 | MS.gene47683:intron | 55.0% |
| ! | GTGCATGCTTTTGACGGGAG+TGG | - | chr5.3:72782092-72782111 | None:intergenic | 55.0% |
| !! | ATTTAATGCTGGGGCACCGG+CGG | + | chr5.3:72781097-72781116 | MS.gene47683:intron | 55.0% |
| !! | GATTTTAGCGTCTCCGCCAC+CGG | - | chr5.3:72780590-72780609 | None:intergenic | 55.0% |
| ATAGCCCCCCGTGTCTTTGG+GGG | - | chr5.3:72784747-72784766 | None:intergenic | 60.0% | |
| ATCGGGGATGCAACGGGGAT+GGG | + | chr5.3:72781168-72781187 | MS.gene47683:CDS | 60.0% | |
| CTGCTCATCGGGGATGCAAC+GGG | + | chr5.3:72781162-72781181 | MS.gene47683:CDS | 60.0% | |
| TCTAGCCCCCAAAGACACGG+GGG | + | chr5.3:72784739-72784758 | MS.gene47683:intron | 60.0% | |
| TGCTCATCGGGGATGCAACG+GGG | + | chr5.3:72781163-72781182 | MS.gene47683:CDS | 60.0% | |
| ! | CGTTTAAAGCGGCGGCCAGA+CGG | + | chr5.3:72781468-72781487 | MS.gene47683:intron | 60.0% |
| ! | GGAGAAGGCTGAGGGGTGTA+GGG | + | chr5.3:72781379-72781398 | MS.gene47683:intron | 60.0% |
| ! | TGGAGAAGGCTGAGGGGTGT+AGG | + | chr5.3:72781378-72781397 | MS.gene47683:intron | 60.0% |
| CATCGGGGATGCAACGGGGA+TGG | + | chr5.3:72781167-72781186 | MS.gene47683:CDS | 65.0% | |
| CTAGCCCCCAAAGACACGGG+GGG | + | chr5.3:72784740-72784759 | MS.gene47683:intron | 65.0% | |
| TCGGGGATGCAACGGGGATG+GGG | + | chr5.3:72781169-72781188 | MS.gene47683:CDS | 65.0% | |
| !! | GGGGCACCGGCGGTGAATAA+TGG | + | chr5.3:72781107-72781126 | MS.gene47683:intron | 65.0% |
| TAAAGCGGCGGCCAGACGGC+AGG | + | chr5.3:72781472-72781491 | MS.gene47683:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 72780578 | 72785689 | 72780578 | ID=MS.gene47683 |
| chr5.3 | mRNA | 72780578 | 72785689 | 72780578 | ID=MS.gene47683.t1;Parent=MS.gene47683 |
| chr5.3 | exon | 72780578 | 72780640 | 72780578 | ID=MS.gene47683.t1.exon1;Parent=MS.gene47683.t1 |
| chr5.3 | CDS | 72780578 | 72780640 | 72780578 | ID=cds.MS.gene47683.t1;Parent=MS.gene47683.t1 |
| chr5.3 | exon | 72781152 | 72781393 | 72781152 | ID=MS.gene47683.t1.exon2;Parent=MS.gene47683.t1 |
| chr5.3 | CDS | 72781152 | 72781393 | 72781152 | ID=cds.MS.gene47683.t1;Parent=MS.gene47683.t1 |
| chr5.3 | exon | 72781510 | 72782023 | 72781510 | ID=MS.gene47683.t1.exon3;Parent=MS.gene47683.t1 |
| chr5.3 | CDS | 72781510 | 72782023 | 72781510 | ID=cds.MS.gene47683.t1;Parent=MS.gene47683.t1 |
| chr5.3 | exon | 72782916 | 72783329 | 72782916 | ID=MS.gene47683.t1.exon4;Parent=MS.gene47683.t1 |
| chr5.3 | CDS | 72782916 | 72783329 | 72782916 | ID=cds.MS.gene47683.t1;Parent=MS.gene47683.t1 |
| chr5.3 | exon | 72783706 | 72783818 | 72783706 | ID=MS.gene47683.t1.exon5;Parent=MS.gene47683.t1 |
| chr5.3 | CDS | 72783706 | 72783818 | 72783706 | ID=cds.MS.gene47683.t1;Parent=MS.gene47683.t1 |
| chr5.3 | exon | 72785347 | 72785689 | 72785347 | ID=MS.gene47683.t1.exon6;Parent=MS.gene47683.t1 |
| chr5.3 | CDS | 72785347 | 72785689 | 72785347 | ID=cds.MS.gene47683.t1;Parent=MS.gene47683.t1 |
| Gene Sequence |
| Protein sequence |
