Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47834.t1 | XP_003604651.1 | 78 | 496 | 42 | 4 | 1 | 430 | 1 | 495 | 6.00E-201 | 710.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47834.t1 | G7JN22 | 78.0 | 496 | 42 | 4 | 1 | 430 | 1 | 495 | 4.3e-201 | 710.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049435 | MS.gene47834 | 0.808158 | 3.55E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene47834 | 0.806564 | 7.74E-50 | -1.69E-46 |
| MS.gene050156 | MS.gene47834 | 0.808751 | 2.65E-50 | -1.69E-46 |
| MS.gene051147 | MS.gene47834 | 0.801711 | 7.91E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene47834 | 0.816116 | 6.53E-52 | -1.69E-46 |
| MS.gene05125 | MS.gene47834 | 0.802336 | 5.89E-49 | -1.69E-46 |
| MS.gene052190 | MS.gene47834 | 0.819153 | 1.35E-52 | -1.69E-46 |
| MS.gene052333 | MS.gene47834 | 0.811411 | 7.09E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene47834 | 0.808252 | 3.39E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene47834 | 0.800341 | 1.51E-48 | -1.69E-46 |
| MS.gene052584 | MS.gene47834 | 0.803763 | 2.98E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene47834 | 0.807356 | 5.26E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene47834 | 0.827313 | 1.68E-54 | -1.69E-46 |
| MS.gene053966 | MS.gene47834 | 0.813833 | 2.10E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene47834 | 0.816025 | 6.84E-52 | -1.69E-46 |
| MS.gene054291 | MS.gene47834 | -0.851262 | 9.95E-61 | -1.69E-46 |
| MS.gene054467 | MS.gene47834 | 0.820534 | 6.52E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene47834 | 0.824868 | 6.39E-54 | -1.69E-46 |
| MS.gene054775 | MS.gene47834 | 0.8034 | 3.55E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene47834 | 0.815979 | 7.00E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene47834 | 0.832141 | 1.12E-55 | -1.69E-46 |
| MS.gene055926 | MS.gene47834 | 0.810479 | 1.13E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene47834 | 0.843291 | 1.53E-58 | -1.69E-46 |
| MS.gene057444 | MS.gene47834 | 0.800299 | 1.54E-48 | -1.69E-46 |
| MS.gene057598 | MS.gene47834 | 0.822885 | 1.86E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene47834 | 0.8241 | 9.69E-54 | -1.69E-46 |
| MS.gene058829 | MS.gene47834 | 0.821027 | 5.02E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene47834 | 0.801215 | 1.00E-48 | -1.69E-46 |
| MS.gene059272 | MS.gene47834 | 0.800093 | 1.69E-48 | -1.69E-46 |
| MS.gene059625 | MS.gene47834 | 0.801586 | 8.39E-49 | -1.69E-46 |
| MS.gene060134 | MS.gene47834 | 0.814751 | 1.31E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene47834 | 0.81404 | 1.89E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47834.t1 | MTR_4g015550 | 76.482 | 523 | 53 | 5 | 1 | 457 | 1 | 519 | 0.0 | 751 |
| MS.gene47834.t1 | MTR_4g015550 | 78.307 | 378 | 27 | 3 | 1 | 324 | 1 | 377 | 0.0 | 569 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47834.t1 | AT5G01260 | 31.773 | 406 | 221 | 12 | 2 | 385 | 6 | 377 | 4.89e-48 | 170 |
| MS.gene47834.t1 | AT5G01260 | 34.675 | 323 | 173 | 8 | 2 | 310 | 6 | 304 | 2.85e-46 | 163 |
| MS.gene47834.t1 | AT5G01260 | 34.494 | 316 | 169 | 8 | 2 | 303 | 6 | 297 | 1.51e-45 | 160 |
Find 89 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATCCTAAACTTGGTTTA+TGG | 0.208760 | 4.4:-84928215 | MS.gene47834:CDS |
| GAAAAGAAGGTGATATTATT+TGG | 0.215755 | 4.4:-84927685 | MS.gene47834:CDS |
| TGTTCATAGTTTCCCATGTT+TGG | 0.263305 | 4.4:+84927639 | None:intergenic |
| TTAGATTCTTCTTCCATTGT+TGG | 0.308755 | 4.4:+84925354 | None:intergenic |
| CGCAAGGCATTACCATGAAT+TGG | 0.309591 | 4.4:+84925324 | None:intergenic |
| CGCAAGGCATTACCATGAAT+TGG | 0.309591 | 4.4:+84925998 | None:intergenic |
| CTATACAAGTTGATACTAAA+AGG | 0.314326 | 4.4:-84927707 | MS.gene47834:CDS |
| CTACTAAAAGATTGCGACTT+TGG | 0.316881 | 4.4:-84928261 | MS.gene47834:CDS |
| GGAGAACAGTTTCTAATAGT+TGG | 0.352666 | 4.4:-84928240 | MS.gene47834:CDS |
| AATAATTGTTCTTGAGGATT+GGG | 0.356549 | 4.4:-84927615 | MS.gene47834:CDS |
| GGGTTCCATAAACCAAGTTT+AGG | 0.360824 | 4.4:+84928210 | None:intergenic |
| GCTATGTTTGCCGAAAATAT+AGG | 0.378453 | 4.4:-84927506 | MS.gene47834:CDS |
| AGAACCGGAGGTTCTTCATT+TGG | 0.386077 | 4.4:+84927545 | None:intergenic |
| AACATAGCCATTGGCTTCTC+TGG | 0.387237 | 4.4:+84927521 | None:intergenic |
| GATCCTAGCTTATGAACTAT+AGG | 0.387560 | 4.4:+84929392 | None:intergenic |
| GCATGAAGAACAGTTTCATT+TGG | 0.387821 | 4.4:-84926053 | MS.gene47834:CDS |
| CATGGTCTGATGGTCATATA+TGG | 0.388044 | 4.4:-84928167 | MS.gene47834:CDS |
| AGGTGATATTATTTGGCAAC+CGG | 0.392152 | 4.4:-84927678 | MS.gene47834:CDS |
| ACATGAAGAGCAGTTTCATT+TGG | 0.393105 | 4.4:-84925379 | MS.gene47834:CDS |
| GGAAAGAGTGAAACAAGAAA+AGG | 0.394035 | 4.4:+84929331 | None:intergenic |
| GAATAATTGTTCTTGAGGAT+TGG | 0.398780 | 4.4:-84927616 | MS.gene47834:CDS |
| TGCAGTGCCATCTGAACAAC+AGG | 0.413359 | 4.4:-84929234 | MS.gene47834:intron |
| GTCAATGGTAATGCATCTAA+AGG | 0.413839 | 4.4:+84928189 | None:intergenic |
| TCTAACTCAGAGCCAATTCA+TGG | 0.434464 | 4.4:-84925336 | MS.gene47834:intron |
| GGAGGTCCTGTTCTTGTACC+TGG | 0.437575 | 4.4:-84927326 | MS.gene47834:CDS |
| GAAAGAGTGAAACAAGAAAA+GGG | 0.442955 | 4.4:+84929332 | None:intergenic |
| AGCTCTTATCCATCTTTCCC+AGG | 0.460639 | 4.4:+84925140 | None:intergenic |
| GTTGGAGATGATCCTAAACT+TGG | 0.469158 | 4.4:-84928222 | MS.gene47834:CDS |
| TTCTGATCCTGAGTTTCAAA+AGG | 0.469360 | 4.4:+84927221 | None:intergenic |
| ATTAAGCCAGGTACAAGAAC+AGG | 0.470486 | 4.4:+84927320 | None:intergenic |
| ATTGGCTTCTCTGGTAGAAC+CGG | 0.470881 | 4.4:+84927530 | None:intergenic |
| TCTTCTTCAACAACTTCACT+TGG | 0.473052 | 4.4:+84927272 | None:intergenic |
| TAAGAGCTCAAAGTGTTTCA+TGG | 0.475434 | 4.4:-84925125 | MS.gene47834:CDS |
| CTTAGAACTAAAACTTGTGA+AGG | 0.476857 | 4.4:+84929415 | None:intergenic |
| GAACAGAATAATTGTTCTTG+AGG | 0.486338 | 4.4:-84927621 | MS.gene47834:CDS |
| TCAAACTCAGAGCCAATTCA+TGG | 0.486763 | 4.4:-84926010 | MS.gene47834:CDS |
| CTTGAAACATGTACAAAACA+AGG | 0.506329 | 4.4:-84929273 | MS.gene47834:CDS |
| ATCATGTGTTCAGGATATGC+TGG | 0.508543 | 4.4:-84927744 | MS.gene47834:intron |
| GTACTTGTACTTATCTCTTG+TGG | 0.509169 | 4.4:+84925426 | None:intergenic |
| TCAATGGTAATGCATCTAAA+GGG | 0.510357 | 4.4:+84928190 | None:intergenic |
| TTACCGTTTCGAAGCCCCAC+TGG | 0.512596 | 4.4:+84925966 | None:intergenic |
| TGCCGAAAATATAGGTTCCT+CGG | 0.514374 | 4.4:-84927498 | MS.gene47834:CDS |
| TTGATACTAAAAGGAAAAGA+AGG | 0.516269 | 4.4:-84927698 | MS.gene47834:CDS |
| TTGGCATCAACAATGGAAGA+AGG | 0.534614 | 4.4:-84926034 | MS.gene47834:CDS |
| CATCCAGTGGGGCTTCGAAA+CGG | 0.535005 | 4.4:-84925969 | MS.gene47834:intron |
| TCAACCAAATGAAGAACCTC+CGG | 0.536881 | 4.4:-84927549 | MS.gene47834:CDS |
| TATTATTTGGCAACCGGGGT+CGG | 0.540226 | 4.4:-84927672 | MS.gene47834:CDS |
| TCAGTCAACGGTATTAAGCC+AGG | 0.540479 | 4.4:+84927308 | None:intergenic |
| AAATAAACCTGTTGTTCAGA+TGG | 0.543697 | 4.4:+84929227 | None:intergenic |
| TGTTCGCTTTGTTGAACTTG+AGG | 0.544102 | 4.4:+84928413 | None:intergenic |
| CGGATCGAGTAATCCAAACA+TGG | 0.544820 | 4.4:-84927652 | MS.gene47834:CDS |
| CAGATGGCACTGCATGCAAA+GGG | 0.546614 | 4.4:+84929243 | None:intergenic |
| AGAACTTCAGAAAATAATAG+AGG | 0.549395 | 4.4:-84927585 | MS.gene47834:CDS |
| AAGCCTATAGTTCATAAGCT+AGG | 0.553146 | 4.4:-84929395 | MS.gene47834:CDS |
| GTTTCAAAAGGTTCAACTGA+TGG | 0.554167 | 4.4:+84927233 | None:intergenic |
| AAGAGTGAAGAATCTGAAGA+TGG | 0.555921 | 4.4:-84927422 | MS.gene47834:CDS |
| TGGATTACTCGATCCGACCC+CGG | 0.556713 | 4.4:+84927659 | None:intergenic |
| TGACCATCAGACCATGTCAA+TGG | 0.564403 | 4.4:+84928174 | None:intergenic |
| GTTTCATTTGGCATCAACAA+TGG | 0.568666 | 4.4:-84926041 | MS.gene47834:CDS |
| TCAGATGGCACTGCATGCAA+AGG | 0.568931 | 4.4:+84929242 | None:intergenic |
| GGCTTCTCTGGTAGAACCGG+AGG | 0.575456 | 4.4:+84927533 | None:intergenic |
| TCATATATGGACTGTTGAGC+TGG | 0.575955 | 4.4:-84928154 | MS.gene47834:intron |
| GTTTCATTTGGCACCAACAA+TGG | 0.578517 | 4.4:-84925367 | MS.gene47834:CDS |
| AATGAAGAACTTTCTCCTAG+TGG | 0.580536 | 4.4:+84925219 | None:intergenic |
| CCAGCTTCTTCTTCAGTCAA+CGG | 0.590556 | 4.4:+84927296 | None:intergenic |
| TGTGTTCAGGATATGCTGGC+TGG | 0.594337 | 4.4:-84927740 | MS.gene47834:intron |
| CCACTGGATGTCATTTCGCA+AGG | 0.596297 | 4.4:+84925982 | None:intergenic |
| TGGCATCAACAATGGAAGAA+GGG | 0.602203 | 4.4:-84926033 | MS.gene47834:CDS |
| TGAAAATGTTCAGTTGAGCA+AGG | 0.604858 | 4.4:-84925472 | MS.gene47834:intron |
| TAGATGCATTACCATTGACA+TGG | 0.613812 | 4.4:-84928185 | MS.gene47834:CDS |
| CCTTGCGAAATGACATCCAG+TGG | 0.615325 | 4.4:-84925982 | MS.gene47834:CDS |
| GGTGATATTATTTGGCAACC+GGG | 0.626598 | 4.4:-84927677 | MS.gene47834:CDS |
| TGAAAATGCTCAGTTAAGCA+AGG | 0.630052 | 4.4:-84926140 | MS.gene47834:intron |
| ACTTCAGAAAATAATAGAGG+AGG | 0.634094 | 4.4:-84927582 | MS.gene47834:CDS |
| TTACCATTGACATGGTCTGA+TGG | 0.637869 | 4.4:-84928177 | MS.gene47834:CDS |
| CTTGCGAAATGACATCCAGT+GGG | 0.638788 | 4.4:-84925981 | MS.gene47834:CDS |
| GAAACATGAAAAGCAACACT+AGG | 0.641404 | 4.4:+84929362 | None:intergenic |
| TTGAAACATGTACAAAACAA+GGG | 0.648807 | 4.4:-84929272 | MS.gene47834:CDS |
| GGTTCTACCAGAGAAGCCAA+TGG | 0.652910 | 4.4:-84927528 | MS.gene47834:CDS |
| CCGTTGACTGAAGAAGAAGC+TGG | 0.654789 | 4.4:-84927296 | MS.gene47834:CDS |
| GTGATATTATTTGGCAACCG+GGG | 0.662994 | 4.4:-84927676 | MS.gene47834:CDS |
| TTCAACTGATGGCTCTACCA+CGG | 0.664103 | 4.4:+84927244 | None:intergenic |
| GGATCGAGTAATCCAAACAT+GGG | 0.665164 | 4.4:-84927651 | MS.gene47834:CDS |
| ACTTTCTGTGAGATCCTCCG+AGG | 0.674643 | 4.4:+84927481 | None:intergenic |
| CGAAAATATAGGTTCCTCGG+AGG | 0.707768 | 4.4:-84927495 | MS.gene47834:CDS |
| TCAGGATCAGAATATACCAG+AGG | 0.719056 | 4.4:-84927210 | MS.gene47834:intron |
| TGTTGAAGAAGAAAAGACCG+TGG | 0.738151 | 4.4:-84927261 | MS.gene47834:CDS |
| TTGCGAAATGACATCCAGTG+GGG | 0.750769 | 4.4:-84925980 | MS.gene47834:CDS |
| TTAGTAGCTGAAACTCAACA+CGG | 0.751100 | 4.4:+84928277 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTGAATTTGATAAAT+GGG | - | chr4.4:84925372-84925391 | MS.gene47834:CDS | 10.0% |
| !! | AAAAACAAAAGTTTCTTAAA+AGG | + | chr4.4:84925644-84925663 | None:intergenic | 15.0% |
| !! | AAAACAAAAGTTTCTTAAAA+GGG | + | chr4.4:84925643-84925662 | None:intergenic | 15.0% |
| !! | ACATATGAGTAAAAATTAAT+TGG | - | chr4.4:84925794-84925813 | MS.gene47834:intron | 15.0% |
| !! | ATAAAATGAGAAAATTTGTA+TGG | + | chr4.4:84928148-84928167 | None:intergenic | 15.0% |
| !! | ATTAATGATAACAATCAATT+TGG | + | chr4.4:84927614-84927633 | None:intergenic | 15.0% |
| !! | GATTGTTATATATACATTAA+GGG | - | chr4.4:84925863-84925882 | MS.gene47834:intron | 15.0% |
| !! | TCTTAATTTCAAAGATTTAA+CGG | + | chr4.4:84926663-84926682 | None:intergenic | 15.0% |
| !! | TGATTGTTATATATACATTA+AGG | - | chr4.4:84925862-84925881 | MS.gene47834:intron | 15.0% |
| !! | TTGGAAACAAAATAAAAAAA+AGG | + | chr4.4:84926517-84926536 | None:intergenic | 15.0% |
| !!! | AACACACAAATTAAAATTTT+AGG | + | chr4.4:84926225-84926244 | None:intergenic | 15.0% |
| !!! | ACACACAAATTAAAATTTTA+GGG | + | chr4.4:84926224-84926243 | None:intergenic | 15.0% |
| !!! | CTTTATTTGAATTTGATAAA+TGG | - | chr4.4:84925371-84925390 | MS.gene47834:CDS | 15.0% |
| !!! | GATTTTAATGTTATACTTTT+TGG | - | chr4.4:84925547-84925566 | MS.gene47834:intron | 15.0% |
| !!! | TCATTGCTTTAAATAATTAA+TGG | + | chr4.4:84928963-84928982 | None:intergenic | 15.0% |
| !!! | TGTTTTTGATTTTTTGTTTT+TGG | - | chr4.4:84925657-84925676 | MS.gene47834:intron | 15.0% |
| !!! | TTGCACATTTTTTTAATATA+TGG | - | chr4.4:84928315-84928334 | MS.gene47834:intron | 15.0% |
| !! | AAAAGAGAATAACTTCAAAT+AGG | + | chr4.4:84925703-84925722 | None:intergenic | 20.0% |
| !! | AAGAAGTTTCTAACAAAATT+TGG | - | chr4.4:84929274-84929293 | MS.gene47834:CDS | 20.0% |
| !! | AAGAGTTCTTGTAAATAAAA+CGG | + | chr4.4:84928832-84928851 | None:intergenic | 20.0% |
| !! | AATAACTTCAAATAGGAAAA+AGG | + | chr4.4:84925696-84925715 | None:intergenic | 20.0% |
| !! | ATAACTTCAAATAGGAAAAA+GGG | + | chr4.4:84925695-84925714 | None:intergenic | 20.0% |
| !! | CAAATCATTAAGATATTGTT+TGG | - | chr4.4:84926428-84926447 | MS.gene47834:intron | 20.0% |
| !! | CAGCGTTAAAAAATAAAAAA+GGG | - | chr4.4:84927162-84927181 | MS.gene47834:intron | 20.0% |
| !! | GTTGTAGTTATTTATTTGTT+TGG | - | chr4.4:84925394-84925413 | MS.gene47834:CDS | 20.0% |
| !! | TCAAATAAAGAACACAAATT+GGG | + | chr4.4:84925361-84925380 | None:intergenic | 20.0% |
| !! | TTCAAATAAAGAACACAAAT+TGG | + | chr4.4:84925362-84925381 | None:intergenic | 20.0% |
| !!! | AAATAAATTGTGTGTTGTTA+TGG | + | chr4.4:84927750-84927769 | None:intergenic | 20.0% |
| !!! | ATATAATTTTAGTGCTTGTT+TGG | + | chr4.4:84928110-84928129 | None:intergenic | 20.0% |
| !!! | CTTTTTGCCTAAATTTTTAT+TGG | - | chr4.4:84929381-84929400 | MS.gene47834:CDS | 20.0% |
| ! | AAAAAAAGATGTCCAAAATC+TGG | + | chr4.4:84928718-84928737 | None:intergenic | 25.0% |
| ! | AAAAAAGATGTCCAAAATCT+GGG | + | chr4.4:84928717-84928736 | None:intergenic | 25.0% |
| ! | AACAAACAAGTATGTTCTAA+TGG | - | chr4.4:84926150-84926169 | MS.gene47834:intron | 25.0% |
| ! | AAGATGTTTAAGTGAACTAA+TGG | - | chr4.4:84925935-84925954 | MS.gene47834:intron | 25.0% |
| ! | AATAATTGTTCTTGAGGATT+GGG | - | chr4.4:84926929-84926948 | MS.gene47834:intron | 25.0% |
| ! | AGAACTTCAGAAAATAATAG+AGG | - | chr4.4:84926959-84926978 | MS.gene47834:intron | 25.0% |
| ! | AGAGTTCTTGTAAATAAAAC+GGG | + | chr4.4:84928831-84928850 | None:intergenic | 25.0% |
| ! | ATATACATTAAGGGTCTATT+TGG | - | chr4.4:84925872-84925891 | MS.gene47834:intron | 25.0% |
| ! | ATCAGATATATTCTAGTCAA+TGG | + | chr4.4:84928857-84928876 | None:intergenic | 25.0% |
| ! | ATGATGATACAAACAAAACA+AGG | + | chr4.4:84927476-84927495 | None:intergenic | 25.0% |
| ! | ATGTTTCAAGAGACAAAAAA+TGG | + | chr4.4:84925261-84925280 | None:intergenic | 25.0% |
| ! | CAAATAAAGAACACAAATTG+GGG | + | chr4.4:84925360-84925379 | None:intergenic | 25.0% |
| ! | CATCATAGATTAAAACCAAA+AGG | + | chr4.4:84925462-84925481 | None:intergenic | 25.0% |
| ! | GAAAAGAAGGTGATATTATT+TGG | - | chr4.4:84926859-84926878 | MS.gene47834:intron | 25.0% |
| ! | GATTATATATGTACGAAACA+AGG | + | chr4.4:84927552-84927571 | None:intergenic | 25.0% |
| ! | GCAGCGTTAAAAAATAAAAA+AGG | - | chr4.4:84927161-84927180 | MS.gene47834:intron | 25.0% |
| ! | GTATTTATGTAGAATTCAAG+AGG | - | chr4.4:84925771-84925790 | MS.gene47834:intron | 25.0% |
| ! | TAACTTCAAATAGGAAAAAG+GGG | + | chr4.4:84925694-84925713 | None:intergenic | 25.0% |
| ! | TATAAACAACCACTACATAA+CGG | + | chr4.4:84926774-84926793 | None:intergenic | 25.0% |
| ! | TATATAATCAATGCATCTTG+AGG | - | chr4.4:84927563-84927582 | MS.gene47834:CDS | 25.0% |
| ! | TTGAAACATGTACAAAACAA+GGG | - | chr4.4:84925272-84925291 | MS.gene47834:intron | 25.0% |
| ! | TTGATACTAAAAGGAAAAGA+AGG | - | chr4.4:84926846-84926865 | MS.gene47834:intron | 25.0% |
| !! | ATATTTTTCATCATGTGTTC+AGG | - | chr4.4:84926791-84926810 | MS.gene47834:intron | 25.0% |
| !! | CTTTTAGTATCAACTTGTAT+AGG | + | chr4.4:84926839-84926858 | None:intergenic | 25.0% |
| !! | TTGTTCTGCATAAATTTTAC+AGG | - | chr4.4:84926085-84926104 | MS.gene47834:CDS | 25.0% |
| !! | TTTGGTCGAAAACATTTTTA+AGG | - | chr4.4:84926446-84926465 | MS.gene47834:intron | 25.0% |
| !!! | ACATTGGTTTAAATGATTAC+TGG | + | chr4.4:84928289-84928308 | None:intergenic | 25.0% |
| !!! | ACTTTTTTGTTCATTTCTGA+AGG | + | chr4.4:84925237-84925256 | None:intergenic | 25.0% |
| !!! | CTATACAAGTTGATACTAAA+AGG | - | chr4.4:84926837-84926856 | MS.gene47834:intron | 25.0% |
| !!! | GGTTTTAATAAAAAGGTTTG+CGG | + | chr4.4:84927925-84927944 | None:intergenic | 25.0% |
| !!! | GTTTGTTAAGTTTTTGTAAC+AGG | + | chr4.4:84927955-84927974 | None:intergenic | 25.0% |
| !!! | TATTTTAATCTGAAACAAGC+TGG | - | chr4.4:84927765-84927784 | MS.gene47834:intron | 25.0% |
| !!! | TTTTTATTTTTTAACGCTGC+AGG | + | chr4.4:84927161-84927180 | None:intergenic | 25.0% |
| AAATAAAAAAGGGACGATTG+TGG | - | chr4.4:84927172-84927191 | MS.gene47834:intron | 30.0% | |
| AAATAAACCTGTTGTTCAGA+TGG | + | chr4.4:84925320-84925339 | None:intergenic | 30.0% | |
| AAATGTGCAAGTTTACACAT+TGG | + | chr4.4:84928305-84928324 | None:intergenic | 30.0% | |
| ACTTCAGAAAATAATAGAGG+AGG | - | chr4.4:84926962-84926981 | MS.gene47834:intron | 30.0% | |
| ATGATCCTAAACTTGGTTTA+TGG | - | chr4.4:84926329-84926348 | MS.gene47834:intron | 30.0% | |
| CACTTAGAGAAGAACTAATT+AGG | - | chr4.4:84927435-84927454 | MS.gene47834:CDS | 30.0% | |
| CGGAATCAAACAATTTGAAA+AGG | + | chr4.4:84927384-84927403 | None:intergenic | 30.0% | |
| CTTAGAACTAAAACTTGTGA+AGG | + | chr4.4:84925132-84925151 | None:intergenic | 30.0% | |
| CTTCTGATGAAAAAACAACA+GGG | - | chr4.4:84928225-84928244 | MS.gene47834:CDS | 30.0% | |
| CTTGAAACATGTACAAAACA+AGG | - | chr4.4:84925271-84925290 | MS.gene47834:intron | 30.0% | |
| GAAAGAGTGAAACAAGAAAA+GGG | + | chr4.4:84925215-84925234 | None:intergenic | 30.0% | |
| GAACAGAATAATTGTTCTTG+AGG | - | chr4.4:84926923-84926942 | MS.gene47834:intron | 30.0% | |
| GAATAATTGTTCTTGAGGAT+TGG | - | chr4.4:84926928-84926947 | MS.gene47834:intron | 30.0% | |
| GAGTTCTTGTAAATAAAACG+GGG | + | chr4.4:84928830-84928849 | None:intergenic | 30.0% | |
| TCAAACAATTTGAAAAGGAG+CGG | + | chr4.4:84927379-84927398 | None:intergenic | 30.0% | |
| TTAGATTCTTCTTCCATTGT+TGG | + | chr4.4:84929193-84929212 | None:intergenic | 30.0% | |
| ! | ACGCAAAAATAGCTTGATTT+TGG | - | chr4.4:84926043-84926062 | MS.gene47834:CDS | 30.0% |
| ! | CGTTTCTTTAAAAGCTCATT+CGG | - | chr4.4:84927402-84927421 | MS.gene47834:CDS | 30.0% |
| ! | CTAATTAGTTCTTCTCTAAG+TGG | + | chr4.4:84927437-84927456 | None:intergenic | 30.0% |
| ! | GTTTCTTTAAAAGCTCATTC+GGG | - | chr4.4:84927403-84927422 | MS.gene47834:CDS | 30.0% |
| ! | TCAATGGTAATGCATCTAAA+GGG | + | chr4.4:84926357-84926376 | None:intergenic | 30.0% |
| ! | TTCTGCATAAATTTTACAGG+AGG | - | chr4.4:84926088-84926107 | MS.gene47834:CDS | 30.0% |
| !! | ATTTTAGTGCTTGTTTGGAT+TGG | + | chr4.4:84928105-84928124 | None:intergenic | 30.0% |
| !! | CGAATGAGCTTTTAAAGAAA+CGG | + | chr4.4:84927404-84927423 | None:intergenic | 30.0% |
| !! | TCTGCAGGGTTTTAATAAAA+AGG | + | chr4.4:84927932-84927951 | None:intergenic | 30.0% |
| !! | TTTGTTCTTTGTTGTTGAAG+TGG | + | chr4.4:84925608-84925627 | None:intergenic | 30.0% |
| !!! | ATTGGTTTTTCTGTGTTTAG+TGG | - | chr4.4:84925812-84925831 | MS.gene47834:intron | 30.0% |
| !!! | GATTGTTTTGATGTCAAATG+TGG | - | chr4.4:84928622-84928641 | MS.gene47834:intron | 30.0% |
| AAAGGTGAAAACAACGTAAC+TGG | + | chr4.4:84926499-84926518 | None:intergenic | 35.0% | |
| AACCAAAAGGAACAAACTCA+TGG | + | chr4.4:84925449-84925468 | None:intergenic | 35.0% | |
| AAGAGTGAAGAATCTGAAGA+TGG | - | chr4.4:84927122-84927141 | MS.gene47834:intron | 35.0% | |
| AAGCCTATAGTTCATAAGCT+AGG | - | chr4.4:84925149-84925168 | MS.gene47834:CDS | 35.0% | |
| AATGAAGAACTTTCTCCTAG+TGG | + | chr4.4:84929328-84929347 | None:intergenic | 35.0% | |
| ACATGAAGAGCAGTTTCATT+TGG | - | chr4.4:84929165-84929184 | MS.gene47834:intron | 35.0% | |
| AGACACTTAGTAATGCTAGA+TGG | + | chr4.4:84927981-84928000 | None:intergenic | 35.0% | |
| AGCATTACTAAGTGTCTGTT+TGG | - | chr4.4:84927984-84928003 | MS.gene47834:intron | 35.0% | |
| AGGTGATATTATTTGGCAAC+CGG | - | chr4.4:84926866-84926885 | MS.gene47834:intron | 35.0% | |
| ATTCAACAGCCAAAAGTTCA+TGG | + | chr4.4:84927719-84927738 | None:intergenic | 35.0% | |
| CTACTAAAAGATTGCGACTT+TGG | - | chr4.4:84926283-84926302 | MS.gene47834:intron | 35.0% | |
| GAAACATGAAAAGCAACACT+AGG | + | chr4.4:84925185-84925204 | None:intergenic | 35.0% | |
| GAGTGAAAGTTGTTAAGAAG+TGG | - | chr4.4:84925834-84925853 | MS.gene47834:intron | 35.0% | |
| GATCCTAGCTTATGAACTAT+AGG | + | chr4.4:84925155-84925174 | None:intergenic | 35.0% | |
| GCATGAAGAACAGTTTCATT+TGG | - | chr4.4:84928491-84928510 | MS.gene47834:intron | 35.0% | |
| GCTATGTTTGCCGAAAATAT+AGG | - | chr4.4:84927038-84927057 | MS.gene47834:intron | 35.0% | |
| GCTTCTGATGAAAAAACAAC+AGG | - | chr4.4:84928224-84928243 | MS.gene47834:CDS | 35.0% | |
| GGAAAGAGTGAAACAAGAAA+AGG | + | chr4.4:84925216-84925235 | None:intergenic | 35.0% | |
| GGAGAACAGTTTCTAATAGT+TGG | - | chr4.4:84926304-84926323 | MS.gene47834:intron | 35.0% | |
| GTTATACTCCATCATTGACA+TGG | + | chr4.4:84925730-84925749 | None:intergenic | 35.0% | |
| GTTTCAAAAGGTTCAACTGA+TGG | + | chr4.4:84927314-84927333 | None:intergenic | 35.0% | |
| GTTTCATTTGGCATCAACAA+TGG | - | chr4.4:84928503-84928522 | MS.gene47834:intron | 35.0% | |
| TAGATGCATTACCATTGACA+TGG | - | chr4.4:84926359-84926378 | MS.gene47834:intron | 35.0% | |
| TCCCAGGCCAATAAAAATTT+AGG | + | chr4.4:84929391-84929410 | None:intergenic | 35.0% | |
| TCTTCTTCAACAACTTCACT+TGG | + | chr4.4:84927275-84927294 | None:intergenic | 35.0% | |
| TGAAAATGCTCAGTTAAGCA+AGG | - | chr4.4:84928404-84928423 | MS.gene47834:intron | 35.0% | |
| TGAAAATGTTCAGTTGAGCA+AGG | - | chr4.4:84929072-84929091 | MS.gene47834:intron | 35.0% | |
| TGTTCATAGTTTCCCATGTT+TGG | + | chr4.4:84926908-84926927 | None:intergenic | 35.0% | |
| TTAGTAGCTGAAACTCAACA+CGG | + | chr4.4:84926270-84926289 | None:intergenic | 35.0% | |
| TTCTGATCCTGAGTTTCAAA+AGG | + | chr4.4:84927326-84927345 | None:intergenic | 35.0% | |
| TTTAGGGATTTGAGTCCTAA+AGG | + | chr4.4:84926208-84926227 | None:intergenic | 35.0% | |
| ! | CTTAAAACTCTGGTTTCCAT+CGG | + | chr4.4:84926619-84926638 | None:intergenic | 35.0% |
| ! | GAGATGTTACCATGAACTTT+TGG | - | chr4.4:84927707-84927726 | MS.gene47834:CDS | 35.0% |
| ! | GTCAATGGTAATGCATCTAA+AGG | + | chr4.4:84926358-84926377 | None:intergenic | 35.0% |
| ! | TAAGAGCTCAAAGTGTTTCA+TGG | - | chr4.4:84929419-84929438 | MS.gene47834:CDS | 35.0% |
| ! | TGCCTAAATTTTTATTGGCC+TGG | - | chr4.4:84929386-84929405 | MS.gene47834:CDS | 35.0% |
| ! | TTCACTTGTAGGCTTTAGTT+AGG | - | chr4.4:84928249-84928268 | MS.gene47834:CDS | 35.0% |
| ! | TTTTCCATCCATGTCAATGA+TGG | - | chr4.4:84925719-84925738 | MS.gene47834:intron | 35.0% |
| !! | AAAGTCGATGCTAGTCTTAA+TGG | - | chr4.4:84929017-84929036 | MS.gene47834:intron | 35.0% |
| !! | AGCTTAATCGATTTTGAAGG+AGG | - | chr4.4:84927200-84927219 | MS.gene47834:intron | 35.0% |
| !! | GCCTAAATTTTTATTGGCCT+GGG | - | chr4.4:84929387-84929406 | MS.gene47834:CDS | 35.0% |
| !! | GGAAGCTTAATCGATTTTGA+AGG | - | chr4.4:84927197-84927216 | MS.gene47834:intron | 35.0% |
| !! | TTCCATGAGTTTGTTCCTTT+TGG | - | chr4.4:84925444-84925463 | MS.gene47834:CDS | 35.0% |
| !!! | AGTTGAACCTTTTGAAACTC+AGG | - | chr4.4:84927316-84927335 | MS.gene47834:CDS | 35.0% |
| !!! | CTCTTTTGGTCTTAAAACTC+TGG | + | chr4.4:84926629-84926648 | None:intergenic | 35.0% |
| AAAAAAGGGACGATTGTGGA+GGG | - | chr4.4:84927176-84927195 | MS.gene47834:intron | 40.0% | |
| ACTTCCTGTGATATACCGTT+AGG | - | chr4.4:84928893-84928912 | MS.gene47834:intron | 40.0% | |
| AGTCACGATCCTTGATATTG+CGG | - | chr4.4:84927810-84927829 | MS.gene47834:intron | 40.0% | |
| ATCATGTGTTCAGGATATGC+TGG | - | chr4.4:84926800-84926819 | MS.gene47834:intron | 40.0% | |
| ATCTTGAGGCCAAAAGAAAG+GGG | - | chr4.4:84927577-84927596 | MS.gene47834:CDS | 40.0% | |
| ATTAAGCCAGGTACAAGAAC+AGG | + | chr4.4:84927227-84927246 | None:intergenic | 40.0% | |
| CATCTTGAGGCCAAAAGAAA+GGG | - | chr4.4:84927576-84927595 | MS.gene47834:CDS | 40.0% | |
| CATGGTCTGATGGTCATATA+TGG | - | chr4.4:84926377-84926396 | MS.gene47834:intron | 40.0% | |
| CGGTGAATTTGACACAATCA+TGG | + | chr4.4:84928082-84928101 | None:intergenic | 40.0% | |
| CTTCCTGTGATATACCGTTA+GGG | - | chr4.4:84928894-84928913 | MS.gene47834:intron | 40.0% | |
| CTTGCGAAATGACATCGAAT+GGG | - | chr4.4:84929237-84929256 | MS.gene47834:CDS | 40.0% | |
| GAAACTTCTTTACCGTTTCG+CGG | + | chr4.4:84929264-84929283 | None:intergenic | 40.0% | |
| GAGTCTTTGCAACAAGTCTA+GGG | + | chr4.4:84928745-84928764 | None:intergenic | 40.0% | |
| GATGTATGCAACCTCAATTG+TGG | - | chr4.4:84928647-84928666 | MS.gene47834:intron | 40.0% | |
| GGATCGAGTAATCCAAACAT+GGG | - | chr4.4:84926893-84926912 | MS.gene47834:intron | 40.0% | |
| GGGTTCCATAAACCAAGTTT+AGG | + | chr4.4:84926337-84926356 | None:intergenic | 40.0% | |
| GGTGATATTATTTGGCAACC+GGG | - | chr4.4:84926867-84926886 | MS.gene47834:intron | 40.0% | |
| GTGATATTATTTGGCAACCG+GGG | - | chr4.4:84926868-84926887 | MS.gene47834:intron | 40.0% | |
| GTTGGAGATGATCCTAAACT+TGG | - | chr4.4:84926322-84926341 | MS.gene47834:intron | 40.0% | |
| GTTTCATTTGGCACCAACAA+TGG | - | chr4.4:84929177-84929196 | MS.gene47834:intron | 40.0% | |
| TAAAAAAGGGACGATTGTGG+AGG | - | chr4.4:84927175-84927194 | MS.gene47834:intron | 40.0% | |
| TACTCCATCATTGACATGGA+TGG | + | chr4.4:84925726-84925745 | None:intergenic | 40.0% | |
| TCAAACTCAGAGCCAATTCA+TGG | - | chr4.4:84928534-84928553 | MS.gene47834:intron | 40.0% | |
| TCAACCAAATGAAGAACCTC+CGG | - | chr4.4:84926995-84927014 | MS.gene47834:intron | 40.0% | |
| TCAGGATCAGAATATACCAG+AGG | - | chr4.4:84927334-84927353 | MS.gene47834:CDS | 40.0% | |
| TCCAAAATGTTCTCGAAACC+TGG | - | chr4.4:84926532-84926551 | MS.gene47834:intron | 40.0% | |
| TCTAACTCAGAGCCAATTCA+TGG | - | chr4.4:84929208-84929227 | MS.gene47834:intron | 40.0% | |
| TCTTCTGCATGTCTTCCTTT+AGG | - | chr4.4:84926190-84926209 | MS.gene47834:intron | 40.0% | |
| TGAGTCTTTGCAACAAGTCT+AGG | + | chr4.4:84928746-84928765 | None:intergenic | 40.0% | |
| TGCCGAAAATATAGGTTCCT+CGG | - | chr4.4:84927046-84927065 | MS.gene47834:intron | 40.0% | |
| TGGCATCAACAATGGAAGAA+GGG | - | chr4.4:84928511-84928530 | MS.gene47834:intron | 40.0% | |
| TGTTGAAGAAGAAAAGACCG+TGG | - | chr4.4:84927283-84927302 | MS.gene47834:CDS | 40.0% | |
| TTACCATTGACATGGTCTGA+TGG | - | chr4.4:84926367-84926386 | MS.gene47834:intron | 40.0% | |
| TTGCGAAATGACATCGAATG+GGG | - | chr4.4:84929238-84929257 | MS.gene47834:CDS | 40.0% | |
| TTGGCATCAACAATGGAAGA+AGG | - | chr4.4:84928510-84928529 | MS.gene47834:intron | 40.0% | |
| ! | AGTTTTTGTAACAGGTCTGC+AGG | + | chr4.4:84927947-84927966 | None:intergenic | 40.0% |
| ! | CGGTGAAAACAACACTCTTT+TGG | + | chr4.4:84926643-84926662 | None:intergenic | 40.0% |
| ! | CTCCGAGGAACCTATATTTT+CGG | + | chr4.4:84927051-84927070 | None:intergenic | 40.0% |
| ! | CTCCTAGTGGTTCTGTAAAA+AGG | + | chr4.4:84929315-84929334 | None:intergenic | 40.0% |
| ! | CTCCTTTTTACAGAACCACT+AGG | - | chr4.4:84929310-84929329 | MS.gene47834:CDS | 40.0% |
| ! | GCAATGTTTCCCCTTTCTTT+TGG | + | chr4.4:84927589-84927608 | None:intergenic | 40.0% |
| ! | GTTTTTGTAACAGGTCTGCA+GGG | + | chr4.4:84927946-84927965 | None:intergenic | 40.0% |
| ! | TCATATATGGACTGTTGAGC+TGG | - | chr4.4:84926390-84926409 | MS.gene47834:intron | 40.0% |
| ! | TGCGATTTTCCGCAATATCA+AGG | + | chr4.4:84927822-84927841 | None:intergenic | 40.0% |
| ! | TGTTCGCTTTGTTGAACTTG+AGG | + | chr4.4:84926134-84926153 | None:intergenic | 40.0% |
| ! | TTAGTGCTTGTTTGGATTGG+CGG | + | chr4.4:84928102-84928121 | None:intergenic | 40.0% |
| ! | TTTTCGGCAAACATAGCCAT+TGG | + | chr4.4:84927035-84927054 | None:intergenic | 40.0% |
| !! | TTTTATTGGCCTGGGAAAGA+TGG | - | chr4.4:84929395-84929414 | MS.gene47834:CDS | 40.0% |
| AAATGTTCTCGAAACCTGGC+TGG | - | chr4.4:84926536-84926555 | MS.gene47834:intron | 45.0% | |
| AACAACAGGGCTTCACTTGT+AGG | - | chr4.4:84928238-84928257 | MS.gene47834:CDS | 45.0% | |
| AAGCCCTAACGGTATATCAC+AGG | + | chr4.4:84928900-84928919 | None:intergenic | 45.0% | |
| AATCTGGGCAGCAACATCAA+TGG | + | chr4.4:84928702-84928721 | None:intergenic | 45.0% | |
| AGAACCGGAGGTTCTTCATT+TGG | + | chr4.4:84927002-84927021 | None:intergenic | 45.0% | |
| AGCTCTTATCCATCTTTCCC+AGG | + | chr4.4:84929407-84929426 | None:intergenic | 45.0% | |
| AGTCTTTGCAACCACAACTG+AGG | + | chr4.4:84927869-84927888 | None:intergenic | 45.0% | |
| CCAGCTTCTTCTTCAGTCAA+CGG | + | chr4.4:84927251-84927270 | None:intergenic | 45.0% | |
| CCTTGCGAAATGACATCGAA+TGG | - | chr4.4:84929236-84929255 | MS.gene47834:CDS | 45.0% | |
| CGAAAATATAGGTTCCTCGG+AGG | - | chr4.4:84927049-84927068 | MS.gene47834:intron | 45.0% | |
| CGGATCGAGTAATCCAAACA+TGG | - | chr4.4:84926892-84926911 | MS.gene47834:intron | 45.0% | |
| CTAACTCAACCCTACAAAGC+TGG | + | chr4.4:84928925-84928944 | None:intergenic | 45.0% | |
| CTTGCGAAATGACATCCAGT+GGG | - | chr4.4:84928563-84928582 | MS.gene47834:intron | 45.0% | |
| GAAAGCAGACCGTTATGTAG+TGG | - | chr4.4:84926762-84926781 | MS.gene47834:intron | 45.0% | |
| GCATCTTGAGGCCAAAAGAA+AGG | - | chr4.4:84927575-84927594 | MS.gene47834:CDS | 45.0% | |
| TATTATTTGGCAACCGGGGT+CGG | - | chr4.4:84926872-84926891 | MS.gene47834:intron | 45.0% | |
| TCAGTCAACGGTATTAAGCC+AGG | + | chr4.4:84927239-84927258 | None:intergenic | 45.0% | |
| TGACCATCAGACCATGTCAA+TGG | + | chr4.4:84926373-84926392 | None:intergenic | 45.0% | |
| TGATGTTGCAACCCAGATCA+CGG | - | chr4.4:84927899-84927918 | MS.gene47834:intron | 45.0% | |
| TTGCGAAATGACATCCAGTG+GGG | - | chr4.4:84928564-84928583 | MS.gene47834:intron | 45.0% | |
| ! | AACAAGGTGATGATGAGCGT+TGG | + | chr4.4:84927536-84927555 | None:intergenic | 45.0% |
| ! | AACTCTGGTTTCCATCGGAA+AGG | + | chr4.4:84926614-84926633 | None:intergenic | 45.0% |
| ! | ACTCTGGTTTCCATCGGAAA+GGG | + | chr4.4:84926613-84926632 | None:intergenic | 45.0% |
| ! | ATGGCGACTCATGGTGATTT+TGG | + | chr4.4:84928063-84928082 | None:intergenic | 45.0% |
| ! | ATTGGCTTCTCTGGTAGAAC+CGG | + | chr4.4:84927017-84927036 | None:intergenic | 45.0% |
| ! | CAGCTTTGTAGGGTTGAGTT+AGG | - | chr4.4:84928923-84928942 | MS.gene47834:intron | 45.0% |
| ! | CCATTCGATGTCATTTCGCA+AGG | + | chr4.4:84929239-84929258 | None:intergenic | 45.0% |
| ! | CGCAAGGCATTACCATGAAT+TGG | + | chr4.4:84928549-84928568 | None:intergenic | 45.0% |
| ! | CTCAATTGTGGTTTGCGTTG+CGG | - | chr4.4:84928659-84928678 | MS.gene47834:intron | 45.0% |
| ! | GCCAGGTTTCGAGAACATTT+TGG | + | chr4.4:84926536-84926555 | None:intergenic | 45.0% |
| ! | GCTGGCAATGTTCTAAGTCA+TGG | - | chr4.4:84927783-84927802 | MS.gene47834:intron | 45.0% |
| ! | TGATGTTGCTGCCCAGATTT+TGG | - | chr4.4:84928703-84928722 | MS.gene47834:intron | 45.0% |
| ! | TGTCTGTTTGGAACCAATCG+CGG | - | chr4.4:84927996-84928015 | MS.gene47834:intron | 45.0% |
| ! | TTCAACTGATGGCTCTACCA+CGG | + | chr4.4:84927303-84927322 | None:intergenic | 45.0% |
| !! | AACATAGCCATTGGCTTCTC+TGG | + | chr4.4:84927026-84927045 | None:intergenic | 45.0% |
| ACTCATCAAGCGGTTACCTC+TGG | + | chr4.4:84927353-84927372 | None:intergenic | 50.0% | |
| ACTTTCTGTGAGATCCTCCG+AGG | + | chr4.4:84927066-84927085 | None:intergenic | 50.0% | |
| ATTACCAGAGCCCTTTCCGA+TGG | - | chr4.4:84926600-84926619 | MS.gene47834:intron | 50.0% | |
| CAAAGCTGGTGAAGCCCTAA+CGG | + | chr4.4:84928911-84928930 | None:intergenic | 50.0% | |
| CAGATGGCACTGCATGCAAA+GGG | + | chr4.4:84925304-84925323 | None:intergenic | 50.0% | |
| CCTTGCGAAATGACATCCAG+TGG | - | chr4.4:84928562-84928581 | MS.gene47834:intron | 50.0% | |
| CGCAACGCAAACCACAATTG+AGG | + | chr4.4:84928661-84928680 | None:intergenic | 50.0% | |
| CGGAAAATCGCAGTCAAGTG+TGG | - | chr4.4:84927830-84927849 | MS.gene47834:intron | 50.0% | |
| CTGGTAATCCAGAGTTCGGT+CGG | + | chr4.4:84926588-84926607 | None:intergenic | 50.0% | |
| GACACAATCATGGCGACTCA+TGG | + | chr4.4:84928072-84928091 | None:intergenic | 50.0% | |
| GATGCATGCAACCTCAGTTG+TGG | - | chr4.4:84927855-84927874 | MS.gene47834:intron | 50.0% | |
| GGTTCTACCAGAGAAGCCAA+TGG | - | chr4.4:84927016-84927035 | MS.gene47834:intron | 50.0% | |
| TCAGATGGCACTGCATGCAA+AGG | + | chr4.4:84925305-84925324 | None:intergenic | 50.0% | |
| TGCAGTGCCATCTGAACAAC+AGG | - | chr4.4:84925310-84925329 | MS.gene47834:intron | 50.0% | |
| TGGTAATCCAGAGTTCGGTC+GGG | + | chr4.4:84926587-84926606 | None:intergenic | 50.0% | |
| TGTGTTCAGGATATGCTGGC+TGG | - | chr4.4:84926804-84926823 | MS.gene47834:intron | 50.0% | |
| ! | AGGGCTTCACCAGCTTTGTA+GGG | - | chr4.4:84928913-84928932 | MS.gene47834:intron | 50.0% |
| ! | CCACTGGATGTCATTTCGCA+AGG | + | chr4.4:84928565-84928584 | None:intergenic | 50.0% |
| ! | CCGTTGACTGAAGAAGAAGC+TGG | - | chr4.4:84927248-84927267 | MS.gene47834:CDS | 50.0% |
| ! | GGCTCTGGTAATCCAGAGTT+CGG | + | chr4.4:84926592-84926611 | None:intergenic | 50.0% |
| ! | TAGGGCTTCACCAGCTTTGT+AGG | - | chr4.4:84928912-84928931 | MS.gene47834:intron | 50.0% |
| AAAGGTTTGCGGCCGTGATC+TGG | + | chr4.4:84927914-84927933 | None:intergenic | 55.0% | |
| AAGGTTTGCGGCCGTGATCT+GGG | + | chr4.4:84927913-84927932 | None:intergenic | 55.0% | |
| CATCCAGTGGGGCTTCGAAA+CGG | - | chr4.4:84928575-84928594 | MS.gene47834:intron | 55.0% | |
| GGAGGTCCTGTTCTTGTACC+TGG | - | chr4.4:84927218-84927237 | MS.gene47834:CDS | 55.0% | |
| GTTTCCATCGGAAAGGGCTC+TGG | + | chr4.4:84926607-84926626 | None:intergenic | 55.0% | |
| TAATCCAGAGTTCGGTCGGG+AGG | + | chr4.4:84926584-84926603 | None:intergenic | 55.0% | |
| TGGATTACTCGATCCGACCC+CGG | + | chr4.4:84926888-84926907 | None:intergenic | 55.0% | |
| TTACCGTTTCGAAGCCCCAC+TGG | + | chr4.4:84928581-84928600 | None:intergenic | 55.0% | |
| ! | CTGTTTGGAACCAATCGCGG+TGG | - | chr4.4:84927999-84928018 | MS.gene47834:intron | 55.0% |
| AACCTGGCTGGAGCAGTCCT+TGG | - | chr4.4:84926548-84926567 | MS.gene47834:intron | 60.0% | |
| AATCACAGCGCCACCGCGAT+TGG | + | chr4.4:84928012-84928031 | None:intergenic | 60.0% | |
| CATCGAATGGGGCCGCGAAA+CGG | - | chr4.4:84929249-84929268 | MS.gene47834:CDS | 60.0% | |
| GGAGCGGCACACTCATCAAG+CGG | + | chr4.4:84927363-84927382 | None:intergenic | 60.0% | |
| GGCTTCTCTGGTAGAACCGG+AGG | + | chr4.4:84927014-84927033 | None:intergenic | 60.0% | |
| TTCACCTCCCGACCGAACTC+TGG | - | chr4.4:84926577-84926596 | MS.gene47834:intron | 60.0% | |
| TTCGGTCGGGAGGTGAAGTC+TGG | + | chr4.4:84926574-84926593 | None:intergenic | 60.0% | |
| CGGGAGGTGAAGTCTGGCCA+AGG | + | chr4.4:84926568-84926587 | None:intergenic | 65.0% | |
| GGCCAAGGACTGCTCCAGCC+AGG | + | chr4.4:84926553-84926572 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 84925122 | 84929444 | 84925122 | ID=MS.gene47834 |
| chr4.4 | mRNA | 84925122 | 84929444 | 84925122 | ID=MS.gene47834.t1;Parent=MS.gene47834 |
| chr4.4 | exon | 84929235 | 84929444 | 84929235 | ID=MS.gene47834.t1.exon1;Parent=MS.gene47834.t1 |
| chr4.4 | CDS | 84929235 | 84929444 | 84929235 | ID=cds.MS.gene47834.t1;Parent=MS.gene47834.t1 |
| chr4.4 | exon | 84928408 | 84928459 | 84928408 | ID=MS.gene47834.t1.exon2;Parent=MS.gene47834.t1 |
| chr4.4 | CDS | 84928408 | 84928459 | 84928408 | ID=cds.MS.gene47834.t1;Parent=MS.gene47834.t1 |
| chr4.4 | exon | 84928155 | 84928315 | 84928155 | ID=MS.gene47834.t1.exon3;Parent=MS.gene47834.t1 |
| chr4.4 | CDS | 84928155 | 84928315 | 84928155 | ID=cds.MS.gene47834.t1;Parent=MS.gene47834.t1 |
| chr4.4 | exon | 84927211 | 84927753 | 84927211 | ID=MS.gene47834.t1.exon4;Parent=MS.gene47834.t1 |
| chr4.4 | CDS | 84927211 | 84927753 | 84927211 | ID=cds.MS.gene47834.t1;Parent=MS.gene47834.t1 |
| chr4.4 | exon | 84925970 | 84926149 | 84925970 | ID=MS.gene47834.t1.exon5;Parent=MS.gene47834.t1 |
| chr4.4 | CDS | 84925970 | 84926149 | 84925970 | ID=cds.MS.gene47834.t1;Parent=MS.gene47834.t1 |
| chr4.4 | exon | 84925337 | 84925481 | 84925337 | ID=MS.gene47834.t1.exon6;Parent=MS.gene47834.t1 |
| chr4.4 | CDS | 84925337 | 84925481 | 84925337 | ID=cds.MS.gene47834.t1;Parent=MS.gene47834.t1 |
| chr4.4 | exon | 84925122 | 84925243 | 84925122 | ID=MS.gene47834.t1.exon7;Parent=MS.gene47834.t1 |
| chr4.4 | CDS | 84925122 | 84925243 | 84925122 | ID=cds.MS.gene47834.t1;Parent=MS.gene47834.t1 |
| Gene Sequence |
| Protein sequence |
