Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05125.t1 | XP_018459315.1 | 46.8 | 342 | 157 | 6 | 1 | 340 | 1 | 319 | 6.30E-67 | 264.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05125.t1 | A0A2N9I863 | 42.2 | 358 | 172 | 9 | 1 | 343 | 1 | 338 | 3.1e-63 | 251.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05125 | MS.gene05415 | 0.801163 | 1.03E-48 | -1.69E-46 |
| MS.gene05125 | MS.gene058515 | 0.809383 | 1.94E-50 | -1.69E-46 |
| MS.gene05125 | MS.gene065904 | 0.8011 | 1.06E-48 | -1.69E-46 |
| MS.gene05125 | MS.gene067273 | 0.805066 | 1.60E-49 | -1.69E-46 |
| MS.gene05125 | MS.gene069956 | 0.801131 | 1.04E-48 | -1.69E-46 |
| MS.gene05125 | MS.gene071442 | 0.806047 | 9.94E-50 | -1.69E-46 |
| MS.gene05125 | MS.gene071444 | 0.801114 | 1.05E-48 | -1.69E-46 |
| MS.gene05125 | MS.gene07294 | 0.80363 | 3.18E-49 | -1.69E-46 |
| MS.gene05125 | MS.gene073139 | 0.802605 | 5.18E-49 | -1.69E-46 |
| MS.gene05125 | MS.gene20809 | 0.804997 | 1.65E-49 | -1.69E-46 |
| MS.gene05125 | MS.gene20859 | 0.801183 | 1.02E-48 | -1.69E-46 |
| MS.gene05125 | MS.gene23055 | 0.812607 | 3.89E-51 | -1.69E-46 |
| MS.gene05125 | MS.gene23190 | 0.815253 | 1.02E-51 | -1.69E-46 |
| MS.gene05125 | MS.gene25867 | 0.80747 | 4.98E-50 | -1.69E-46 |
| MS.gene05125 | MS.gene31231 | 0.81105 | 8.50E-51 | -1.69E-46 |
| MS.gene05125 | MS.gene31283 | 0.808436 | 3.10E-50 | -1.69E-46 |
| MS.gene05125 | MS.gene31735 | 0.808557 | 2.92E-50 | -1.69E-46 |
| MS.gene05125 | MS.gene32874 | 0.806553 | 7.78E-50 | -1.69E-46 |
| MS.gene05125 | MS.gene33624 | 0.809477 | 1.86E-50 | -1.69E-46 |
| MS.gene05125 | MS.gene38011 | 0.81503 | 1.14E-51 | -1.69E-46 |
| MS.gene05125 | MS.gene47834 | 0.802336 | 5.89E-49 | -1.69E-46 |
| MS.gene05125 | MS.gene52061 | 0.819044 | 1.43E-52 | -1.69E-46 |
| MS.gene05125 | MS.gene52525 | 0.81396 | 1.96E-51 | -1.69E-46 |
| MS.gene05125 | MS.gene53586 | 0.811859 | 5.67E-51 | -1.69E-46 |
| MS.gene05125 | MS.gene53786 | 0.800129 | 1.67E-48 | -1.69E-46 |
| MS.gene05125 | MS.gene54507 | 0.814737 | 1.32E-51 | -1.69E-46 |
| MS.gene05125 | MS.gene54717 | 0.80773 | 4.38E-50 | -1.69E-46 |
| MS.gene05125 | MS.gene64249 | 0.810803 | 9.61E-51 | -1.69E-46 |
| MS.gene05125 | MS.gene64567 | 0.830752 | 2.46E-55 | -1.69E-46 |
| MS.gene05125 | MS.gene65172 | 0.810004 | 1.43E-50 | -1.69E-46 |
| MS.gene05125 | MS.gene66700 | 0.804181 | 2.44E-49 | -1.69E-46 |
| MS.gene05125 | MS.gene74364 | 0.804354 | 2.25E-49 | -1.69E-46 |
| MS.gene05125 | MS.gene74367 | 0.804345 | 2.26E-49 | -1.69E-46 |
| MS.gene05125 | MS.gene77220 | 0.805279 | 1.44E-49 | -1.69E-46 |
| MS.gene05125 | MS.gene77781 | 0.800178 | 1.63E-48 | -1.69E-46 |
| MS.gene05125 | MS.gene80853 | 0.809552 | 1.79E-50 | -1.69E-46 |
| MS.gene05125 | MS.gene84803 | 0.800564 | 1.36E-48 | -1.69E-46 |
| MS.gene05125 | MS.gene84994 | 0.800582 | 1.35E-48 | -1.69E-46 |
| MS.gene05125 | MS.gene92567 | 0.802651 | 5.07E-49 | -1.69E-46 |
| MS.gene05125 | MS.gene97534 | 0.82365 | 1.24E-53 | -1.69E-46 |
| MS.gene05125 | MS.gene99849 | 0.804294 | 2.31E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05125.t1 | MTR_7g062720 | 40.541 | 148 | 80 | 3 | 1 | 146 | 1 | 142 | 2.06e-31 | 116 |
| MS.gene05125.t1 | MTR_4g037355 | 40.441 | 136 | 61 | 4 | 155 | 290 | 1 | 116 | 1.84e-22 | 92.0 |
| MS.gene05125.t1 | MTR_5g061150 | 35.354 | 99 | 64 | 0 | 52 | 150 | 38 | 136 | 3.64e-18 | 80.5 |
| MS.gene05125.t1 | MTR_4g112730 | 57.971 | 69 | 28 | 1 | 143 | 211 | 2 | 69 | 6.79e-18 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 69 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTCTTATTGCCCTCATTAA+TGG | 0.201947 | 3.4:-64781524 | MS.gene05125:CDS |
| AAAGTTGTGGCGTTTATTTC+AGG | 0.203868 | 3.4:+64781208 | None:intergenic |
| TGGATCAGTGGAACAAATTA+AGG | 0.229899 | 3.4:-64781504 | MS.gene05125:CDS |
| GACAAAATTAAGGCAAGATT+TGG | 0.257188 | 3.4:-64781559 | MS.gene05125:CDS |
| TGATTTGGTTACAGCTCTTC+TGG | 0.265964 | 3.4:-64781299 | MS.gene05125:CDS |
| GATTCTTGAGGGAGACGATT+TGG | 0.271296 | 3.4:-64781701 | MS.gene05125:CDS |
| CTCAATTAAGTTGTTGTTCC+AGG | 0.274617 | 3.4:+64781750 | None:intergenic |
| CACGGCCTCCACCACGAAAA+TGG | 0.277262 | 3.4:+64781092 | None:intergenic |
| CATAGGAGAAGATATTAATA+TGG | 0.311554 | 3.4:-64780798 | MS.gene05125:CDS |
| ATTTACTGAATACTCTGATT+TGG | 0.313227 | 3.4:-64781314 | MS.gene05125:CDS |
| CTTGATGATTCTTGTTGGTT+TGG | 0.339105 | 3.4:+64781032 | None:intergenic |
| GAAGAGGTTATATGAATTAT+AGG | 0.339571 | 3.4:-64781069 | MS.gene05125:CDS |
| GGGAGATGTCCCAGAGGAAT+TGG | 0.345733 | 3.4:-64781680 | MS.gene05125:CDS |
| ATTCTTGAGGGAGACGATTT+GGG | 0.354692 | 3.4:-64781700 | MS.gene05125:CDS |
| AAGACAGGTAGTATCATTCT+TGG | 0.359896 | 3.4:+64780835 | None:intergenic |
| TTTACCTTGATGATTCTTGT+TGG | 0.362649 | 3.4:+64781027 | None:intergenic |
| CTTGAGGCTGCTGATTTCAT+AGG | 0.363536 | 3.4:-64780815 | MS.gene05125:CDS |
| GATTTCTAGAGGGACCTTCC+TGG | 0.373636 | 3.4:+64780993 | None:intergenic |
| CATAGCCACCACGTCCTCTT+TGG | 0.374275 | 3.4:+64781158 | None:intergenic |
| CGTGGTGGCTATGCTCGTTT+TGG | 0.395091 | 3.4:-64781148 | MS.gene05125:CDS |
| ACAAAATTAAGGCAAGATTT+GGG | 0.416566 | 3.4:-64781558 | MS.gene05125:CDS |
| TATAACTGAAAAGGAAAAGT+TGG | 0.422757 | 3.4:-64781401 | MS.gene05125:CDS |
| CGTGGTGGAGGCCGTGGAAG+AGG | 0.431707 | 3.4:-64781085 | MS.gene05125:CDS |
| AGATACAAAGAATCTGTTGA+TGG | 0.446469 | 3.4:-64780893 | MS.gene05125:CDS |
| TGGCAAAACTATAACTGAAA+AGG | 0.467052 | 3.4:-64781410 | MS.gene05125:CDS |
| ATCTGTTGATGGAAAGGAAA+AGG | 0.477668 | 3.4:-64780882 | MS.gene05125:CDS |
| AACCACCAGTTGCGTCCTAC+AGG | 0.478404 | 3.4:-64781244 | MS.gene05125:CDS |
| TTGTTCCTGTAGGACGCAAC+TGG | 0.480977 | 3.4:+64781239 | None:intergenic |
| AGACAGGTAGTATCATTCTT+GGG | 0.483328 | 3.4:+64780836 | None:intergenic |
| ATCAAGCACCACATTGATGA+TGG | 0.492315 | 3.4:-64781628 | MS.gene05125:CDS |
| TGCAACAACAATATAGAATG+AGG | 0.496917 | 3.4:-64781339 | MS.gene05125:CDS |
| CTGGAGACAACTACATAACC+TGG | 0.502040 | 3.4:-64781768 | MS.gene05125:CDS |
| AACAAGAATCATCAAGGTAA+AGG | 0.504207 | 3.4:-64781025 | MS.gene05125:CDS |
| TGTTATAGATGCGGAAAGAA+AGG | 0.506542 | 3.4:-64780959 | MS.gene05125:CDS |
| CAAAGAATCTGTTGATGGAA+AGG | 0.510693 | 3.4:-64780888 | MS.gene05125:CDS |
| GATGCGGAAAGAAAGGTCAT+TGG | 0.533423 | 3.4:-64780952 | MS.gene05125:CDS |
| GGACTCGACAAGATTCTTGA+GGG | 0.539594 | 3.4:-64781712 | MS.gene05125:CDS |
| GTTCCACTGATCCATTAATG+AGG | 0.543612 | 3.4:+64781513 | None:intergenic |
| TTGGTTTGGTCATATTTGAG+AGG | 0.544297 | 3.4:+64781046 | None:intergenic |
| TTCCACTGATCCATTAATGA+GGG | 0.554709 | 3.4:+64781514 | None:intergenic |
| CGTGGTCGAGGCAGAAGTCA+TGG | 0.554869 | 3.4:-64781121 | MS.gene05125:CDS |
| GAAATCAGCAGCCTCAAGAC+AGG | 0.558951 | 3.4:+64780820 | None:intergenic |
| TCTTTCCGCATCTATAACAA+CGG | 0.562205 | 3.4:+64780963 | None:intergenic |
| AATTGAGTATCTTGCATGTG+AGG | 0.565013 | 3.4:-64781734 | MS.gene05125:CDS |
| CAAACCAACAAGAATCATCA+AGG | 0.574004 | 3.4:-64781031 | MS.gene05125:CDS |
| AGGTAAAGGTAAAAGCATCC+AGG | 0.575090 | 3.4:-64781011 | MS.gene05125:CDS |
| ATTGAGTATCTTGCATGTGA+GGG | 0.575966 | 3.4:-64781733 | MS.gene05125:CDS |
| GGATATGCCATTGTTCCTGT+AGG | 0.578642 | 3.4:+64781229 | None:intergenic |
| GCAACAACAATATAGAATGA+GGG | 0.579939 | 3.4:-64781338 | MS.gene05125:CDS |
| TGCCCTCATTAATGGATCAG+TGG | 0.582546 | 3.4:-64781516 | MS.gene05125:CDS |
| TTCCTGTAGGACGCAACTGG+TGG | 0.593030 | 3.4:+64781242 | None:intergenic |
| AATTCATATAACCTCTTCCA+CGG | 0.595635 | 3.4:+64781074 | None:intergenic |
| ACGCCCTTGATTAAAAGTTG+TGG | 0.608515 | 3.4:+64781195 | None:intergenic |
| GCAATATCACTTGAGATGCA+TGG | 0.608661 | 3.4:+64781359 | None:intergenic |
| TATAATCGCCAAAGAGGACG+TGG | 0.608957 | 3.4:-64781166 | MS.gene05125:CDS |
| GGGACTCGACAAGATTCTTG+AGG | 0.610766 | 3.4:-64781713 | MS.gene05125:CDS |
| TGTTGATGGAAAGGAAAAGG+AGG | 0.612844 | 3.4:-64780879 | MS.gene05125:CDS |
| TTTGGTTACAGCTCTTCTGG+TGG | 0.621241 | 3.4:-64781296 | MS.gene05125:CDS |
| ACGGTCATCATGATTTCTAG+AGG | 0.628064 | 3.4:+64780982 | None:intergenic |
| GTCATTGGTCTAAAGCATGT+AGG | 0.629444 | 3.4:-64780937 | MS.gene05125:CDS |
| GAATGATACTACCTGTCTTG+AGG | 0.637144 | 3.4:-64780831 | MS.gene05125:CDS |
| GGTGGTTATAATCGCCAAAG+AGG | 0.642086 | 3.4:-64781172 | MS.gene05125:CDS |
| CGGTCATCATGATTTCTAGA+GGG | 0.646918 | 3.4:+64780983 | None:intergenic |
| GATGACCGTTGTTATAGATG+CGG | 0.650586 | 3.4:-64780968 | MS.gene05125:CDS |
| GTTGCGTCCTACAGGAACAA+TGG | 0.661047 | 3.4:-64781236 | MS.gene05125:CDS |
| AAAGGTAAAAGCATCCAGGA+AGG | 0.661440 | 3.4:-64781007 | MS.gene05125:CDS |
| AATCGCCAAAGAGGACGTGG+TGG | 0.698905 | 3.4:-64781163 | MS.gene05125:CDS |
| TTTGTAATCCATCATCAATG+TGG | 0.715751 | 3.4:+64781620 | None:intergenic |
| CGATTTGGGAGATGTCCCAG+AGG | 0.725435 | 3.4:-64781686 | MS.gene05125:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATGTTTAAAATTTTGAAT+TGG | + | chr3.4:64780813-64780832 | None:intergenic | 10.0% |
| !!! | TTCAAAATTTTAAACATAAC+TGG | - | chr3.4:64780814-64780833 | MS.gene05125:CDS | 15.0% |
| ! | ACAAAATTAAGGCAAGATTT+GGG | - | chr3.4:64781043-64781062 | MS.gene05125:CDS | 25.0% |
| ! | ATTTACTGAATACTCTGATT+TGG | - | chr3.4:64781287-64781306 | MS.gene05125:CDS | 25.0% |
| ! | CATAGGAGAAGATATTAATA+TGG | - | chr3.4:64781803-64781822 | MS.gene05125:CDS | 25.0% |
| ! | GAAGAGGTTATATGAATTAT+AGG | - | chr3.4:64781532-64781551 | MS.gene05125:CDS | 25.0% |
| ! | TATAACTGAAAAGGAAAAGT+TGG | - | chr3.4:64781200-64781219 | MS.gene05125:CDS | 25.0% |
| !! | AAAAGATCCCAAGATTTTAT+GGG | - | chr3.4:64781020-64781039 | MS.gene05125:CDS | 25.0% |
| !! | AATTTTGTCCCATAAAATCT+TGG | + | chr3.4:64781031-64781050 | None:intergenic | 25.0% |
| !! | ATTGCACAATTAGAATTTTG+TGG | - | chr3.4:64781171-64781190 | MS.gene05125:CDS | 25.0% |
| !! | ATTTTGTCCCATAAAATCTT+GGG | + | chr3.4:64781030-64781049 | None:intergenic | 25.0% |
| !! | GATTTTATGGGACAAAATTA+AGG | - | chr3.4:64781032-64781051 | MS.gene05125:CDS | 25.0% |
| !!! | CAACAACAGTTTTATAATCT+TGG | + | chr3.4:64781125-64781144 | None:intergenic | 25.0% |
| AACAAGAATCATCAAGGTAA+AGG | - | chr3.4:64781576-64781595 | MS.gene05125:CDS | 30.0% | |
| AATTCATATAACCTCTTCCA+CGG | + | chr3.4:64781530-64781549 | None:intergenic | 30.0% | |
| AGATACAAAGAATCTGTTGA+TGG | - | chr3.4:64781708-64781727 | MS.gene05125:CDS | 30.0% | |
| GACAAAATTAAGGCAAGATT+TGG | - | chr3.4:64781042-64781061 | MS.gene05125:CDS | 30.0% | |
| GCAACAACAATATAGAATGA+GGG | - | chr3.4:64781263-64781282 | MS.gene05125:CDS | 30.0% | |
| TGCAACAACAATATAGAATG+AGG | - | chr3.4:64781262-64781281 | MS.gene05125:CDS | 30.0% | |
| TGGCAAAACTATAACTGAAA+AGG | - | chr3.4:64781191-64781210 | MS.gene05125:CDS | 30.0% | |
| TTTGTAATCCATCATCAATG+TGG | + | chr3.4:64780984-64781003 | None:intergenic | 30.0% | |
| ! | CAAAAGATCCCAAGATTTTA+TGG | - | chr3.4:64781019-64781038 | MS.gene05125:CDS | 30.0% |
| ! | TATCTTTTACACAGATACTC+TGG | + | chr3.4:64781693-64781712 | None:intergenic | 30.0% |
| ! | TTTACCTTGATGATTCTTGT+TGG | + | chr3.4:64781577-64781596 | None:intergenic | 30.0% |
| AAAGTTGTGGCGTTTATTTC+AGG | + | chr3.4:64781396-64781415 | None:intergenic | 35.0% | |
| AAGACAGGTAGTATCATTCT+TGG | + | chr3.4:64781769-64781788 | None:intergenic | 35.0% | |
| AATTGAGTATCTTGCATGTG+AGG | - | chr3.4:64780867-64780886 | MS.gene05125:CDS | 35.0% | |
| AGACAGGTAGTATCATTCTT+GGG | + | chr3.4:64781768-64781787 | None:intergenic | 35.0% | |
| ATTGAGTATCTTGCATGTGA+GGG | - | chr3.4:64780868-64780887 | MS.gene05125:CDS | 35.0% | |
| CAAACCAACAAGAATCATCA+AGG | - | chr3.4:64781570-64781589 | MS.gene05125:CDS | 35.0% | |
| TCTTTCCGCATCTATAACAA+CGG | + | chr3.4:64781641-64781660 | None:intergenic | 35.0% | |
| TGGATCAGTGGAACAAATTA+AGG | - | chr3.4:64781097-64781116 | MS.gene05125:CDS | 35.0% | |
| TGTTATAGATGCGGAAAGAA+AGG | - | chr3.4:64781642-64781661 | MS.gene05125:CDS | 35.0% | |
| TTCCACTGATCCATTAATGA+GGG | + | chr3.4:64781090-64781109 | None:intergenic | 35.0% | |
| ! | AACGCCACAACTTTTAATCA+AGG | - | chr3.4:64781402-64781421 | MS.gene05125:CDS | 35.0% |
| ! | ACGCCACAACTTTTAATCAA+GGG | - | chr3.4:64781403-64781422 | MS.gene05125:CDS | 35.0% |
| ! | ATCTGTTGATGGAAAGGAAA+AGG | - | chr3.4:64781719-64781738 | MS.gene05125:CDS | 35.0% |
| ! | CAAAGAATCTGTTGATGGAA+AGG | - | chr3.4:64781713-64781732 | MS.gene05125:CDS | 35.0% |
| ! | CTCAATTAAGTTGTTGTTCC+AGG | + | chr3.4:64780854-64780873 | None:intergenic | 35.0% |
| ! | CTTGATGATTCTTGTTGGTT+TGG | + | chr3.4:64781572-64781591 | None:intergenic | 35.0% |
| ! | TTTTCTTTGCCAATTCCTCT+GGG | + | chr3.4:64780933-64780952 | None:intergenic | 35.0% |
| ! | TTTTTCTTTGCCAATTCCTC+TGG | + | chr3.4:64780934-64780953 | None:intergenic | 35.0% |
| !! | AGTCTTATTGCCCTCATTAA+TGG | - | chr3.4:64781077-64781096 | MS.gene05125:CDS | 35.0% |
| !! | TTGGTTTGGTCATATTTGAG+AGG | + | chr3.4:64781558-64781577 | None:intergenic | 35.0% |
| ACGCCCTTGATTAAAAGTTG+TGG | + | chr3.4:64781409-64781428 | None:intergenic | 40.0% | |
| ATCAAGCACCACATTGATGA+TGG | - | chr3.4:64780973-64780992 | MS.gene05125:CDS | 40.0% | |
| ATTCTTGAGGGAGACGATTT+GGG | - | chr3.4:64780901-64780920 | MS.gene05125:CDS | 40.0% | |
| GAATGATACTACCTGTCTTG+AGG | - | chr3.4:64781770-64781789 | MS.gene05125:CDS | 40.0% | |
| GATGACCGTTGTTATAGATG+CGG | - | chr3.4:64781633-64781652 | MS.gene05125:CDS | 40.0% | |
| GCAATATCACTTGAGATGCA+TGG | + | chr3.4:64781245-64781264 | None:intergenic | 40.0% | |
| GTTCCACTGATCCATTAATG+AGG | + | chr3.4:64781091-64781110 | None:intergenic | 40.0% | |
| ! | ACAACTTTTAATCAAGGGCG+TGG | - | chr3.4:64781408-64781427 | MS.gene05125:CDS | 40.0% |
| ! | ACGGTCATCATGATTTCTAG+AGG | + | chr3.4:64781622-64781641 | None:intergenic | 40.0% |
| ! | CGGTCATCATGATTTCTAGA+GGG | + | chr3.4:64781621-64781640 | None:intergenic | 40.0% |
| ! | GTCATTGGTCTAAAGCATGT+AGG | - | chr3.4:64781664-64781683 | MS.gene05125:CDS | 40.0% |
| ! | TGTTGATGGAAAGGAAAAGG+AGG | - | chr3.4:64781722-64781741 | MS.gene05125:CDS | 40.0% |
| !! | AAAGGTAAAAGCATCCAGGA+AGG | - | chr3.4:64781594-64781613 | MS.gene05125:CDS | 40.0% |
| !! | AGGTAAAGGTAAAAGCATCC+AGG | - | chr3.4:64781590-64781609 | MS.gene05125:CDS | 40.0% |
| !! | TGATTTGGTTACAGCTCTTC+TGG | - | chr3.4:64781302-64781321 | MS.gene05125:CDS | 40.0% |
| CTGGAGACAACTACATAACC+TGG | - | chr3.4:64780833-64780852 | MS.gene05125:CDS | 45.0% | |
| GATGCGGAAAGAAAGGTCAT+TGG | - | chr3.4:64781649-64781668 | MS.gene05125:CDS | 45.0% | |
| GATTCTTGAGGGAGACGATT+TGG | - | chr3.4:64780900-64780919 | MS.gene05125:CDS | 45.0% | |
| GGACTCGACAAGATTCTTGA+GGG | - | chr3.4:64780889-64780908 | MS.gene05125:CDS | 45.0% | |
| GGATATGCCATTGTTCCTGT+AGG | + | chr3.4:64781375-64781394 | None:intergenic | 45.0% | |
| GGTGGTTATAATCGCCAAAG+AGG | - | chr3.4:64781429-64781448 | MS.gene05125:CDS | 45.0% | |
| TATAATCGCCAAAGAGGACG+TGG | - | chr3.4:64781435-64781454 | MS.gene05125:CDS | 45.0% | |
| TTTGGTTACAGCTCTTCTGG+TGG | - | chr3.4:64781305-64781324 | MS.gene05125:CDS | 45.0% | |
| ! | CATGGTCGAAACCATTTTCG+TGG | - | chr3.4:64781498-64781517 | MS.gene05125:CDS | 45.0% |
| ! | TGCCCTCATTAATGGATCAG+TGG | - | chr3.4:64781085-64781104 | MS.gene05125:CDS | 45.0% |
| !! | ACTTTTAATCAAGGGCGTGG+TGG | - | chr3.4:64781411-64781430 | MS.gene05125:CDS | 45.0% |
| !! | CTTGAGGCTGCTGATTTCAT+AGG | - | chr3.4:64781786-64781805 | MS.gene05125:CDS | 45.0% |
| GAAATCAGCAGCCTCAAGAC+AGG | + | chr3.4:64781784-64781803 | None:intergenic | 50.0% | |
| GGGACTCGACAAGATTCTTG+AGG | - | chr3.4:64780888-64780907 | MS.gene05125:CDS | 50.0% | |
| GTTGCGTCCTACAGGAACAA+TGG | - | chr3.4:64781365-64781384 | MS.gene05125:CDS | 50.0% | |
| TTGTTCCTGTAGGACGCAAC+TGG | + | chr3.4:64781365-64781384 | None:intergenic | 50.0% | |
| ! | CGAAACCATTTTCGTGGTGG+AGG | - | chr3.4:64781504-64781523 | MS.gene05125:CDS | 50.0% |
| ! | GATTTCTAGAGGGACCTTCC+TGG | + | chr3.4:64781611-64781630 | None:intergenic | 50.0% |
| ! | GGTCGAAACCATTTTCGTGG+TGG | - | chr3.4:64781501-64781520 | MS.gene05125:CDS | 50.0% |
| !! | TATGCTCGTTTTGGTGGTCG+TGG | - | chr3.4:64781462-64781481 | MS.gene05125:CDS | 50.0% |
| AACCACCAGTTGCGTCCTAC+AGG | - | chr3.4:64781357-64781376 | MS.gene05125:CDS | 55.0% | |
| AATCGCCAAAGAGGACGTGG+TGG | - | chr3.4:64781438-64781457 | MS.gene05125:CDS | 55.0% | |
| CATAGCCACCACGTCCTCTT+TGG | + | chr3.4:64781446-64781465 | None:intergenic | 55.0% | |
| GGGAGATGTCCCAGAGGAAT+TGG | - | chr3.4:64780921-64780940 | MS.gene05125:CDS | 55.0% | |
| TTCCTGTAGGACGCAACTGG+TGG | + | chr3.4:64781362-64781381 | None:intergenic | 55.0% | |
| ! | CGATTTGGGAGATGTCCCAG+AGG | - | chr3.4:64780915-64780934 | MS.gene05125:CDS | 55.0% |
| ! | CGTGGTGGCTATGCTCGTTT+TGG | - | chr3.4:64781453-64781472 | MS.gene05125:CDS | 55.0% |
| ! | GGTGGCTATGCTCGTTTTGG+TGG | - | chr3.4:64781456-64781475 | MS.gene05125:CDS | 55.0% |
| CACGGCCTCCACCACGAAAA+TGG | + | chr3.4:64781512-64781531 | None:intergenic | 60.0% | |
| CGTGGTCGAGGCAGAAGTCA+TGG | - | chr3.4:64781480-64781499 | MS.gene05125:CDS | 60.0% | |
| !! | CATTTTCGTGGTGGAGGCCG+TGG | - | chr3.4:64781510-64781529 | MS.gene05125:CDS | 60.0% |
| !! | CGTTTTGGTGGTCGTGGTCG+AGG | - | chr3.4:64781468-64781487 | MS.gene05125:CDS | 60.0% |
| ! | CGTGGTGGAGGCCGTGGAAG+AGG | - | chr3.4:64781516-64781535 | MS.gene05125:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 64780793 | 64781830 | 64780793 | ID=MS.gene05125 |
| chr3.4 | mRNA | 64780793 | 64781830 | 64780793 | ID=MS.gene05125.t1;Parent=MS.gene05125 |
| chr3.4 | exon | 64780793 | 64781830 | 64780793 | ID=MS.gene05125.t1.exon1;Parent=MS.gene05125.t1 |
| chr3.4 | CDS | 64780793 | 64781830 | 64780793 | ID=cds.MS.gene05125.t1;Parent=MS.gene05125.t1 |
| Gene Sequence |
| Protein sequence |
