Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48347.t1 | XP_013457775.1 | 98.2 | 338 | 6 | 0 | 1 | 338 | 12 | 349 | 4.70E-179 | 637.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48347.t1 | Q6RVV4 | 44.2 | 312 | 170 | 2 | 13 | 324 | 9 | 316 | 1.5e-64 | 248.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48347.t1 | A0A072UR37 | 98.2 | 338 | 6 | 0 | 1 | 338 | 12 | 349 | 3.4e-179 | 637.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049350 | MS.gene48347 | 0.810227 | 1.28E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene48347 | 0.812546 | 4.01E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene48347 | 0.816821 | 4.54E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene48347 | 0.823908 | 1.08E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene48347 | 0.816838 | 4.50E-52 | -1.69E-46 |
| MS.gene053536 | MS.gene48347 | 0.805144 | 1.54E-49 | -1.69E-46 |
| MS.gene053538 | MS.gene48347 | 0.803542 | 3.32E-49 | -1.69E-46 |
| MS.gene053581 | MS.gene48347 | 0.805521 | 1.28E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene48347 | 0.829731 | 4.37E-55 | -1.69E-46 |
| MS.gene055144 | MS.gene48347 | 0.806214 | 9.17E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene48347 | 0.822166 | 2.74E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene48347 | 0.811777 | 5.91E-51 | -1.69E-46 |
| MS.gene055468 | MS.gene48347 | 0.801614 | 8.28E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene48347 | 0.805819 | 1.11E-49 | -1.69E-46 |
| MS.gene055537 | MS.gene48347 | 0.831963 | 1.24E-55 | -1.69E-46 |
| MS.gene055890 | MS.gene48347 | 0.804025 | 2.63E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene48347 | 0.81568 | 8.17E-52 | -1.69E-46 |
| MS.gene056308 | MS.gene48347 | 0.818293 | 2.11E-52 | -1.69E-46 |
| MS.gene05894 | MS.gene48347 | 0.803043 | 4.21E-49 | -1.69E-46 |
| MS.gene059424 | MS.gene48347 | 0.803403 | 3.54E-49 | -1.69E-46 |
| MS.gene059426 | MS.gene48347 | 0.804485 | 2.11E-49 | -1.69E-46 |
| MS.gene060519 | MS.gene48347 | 0.846737 | 1.80E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene061155 | MS.gene48347 | PPI |
| MS.gene006263 | MS.gene48347 | PPI |
| MS.gene48347 | MS.gene49117 | PPI |
| MS.gene48347 | MS.gene061158 | PPI |
| MS.gene34141 | MS.gene48347 | PPI |
| MS.gene48347 | MS.gene49120 | PPI |
| MS.gene48347 | MS.gene34138 | PPI |
| MS.gene48347 | MS.gene006265 | PPI |
| MS.gene48347 | MS.gene006264 | PPI |
| MS.gene48347 | MS.gene061157 | PPI |
| MS.gene48347 | MS.gene34140 | PPI |
| MS.gene48347 | MS.gene49118 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48347.t1 | MTR_4g105310 | 98.225 | 338 | 6 | 0 | 1 | 338 | 12 | 349 | 0.0 | 682 |
| MS.gene48347.t1 | MTR_3g077410 | 83.841 | 328 | 53 | 0 | 1 | 328 | 1 | 328 | 0.0 | 577 |
| MS.gene48347.t1 | MTR_4g105310 | 98.425 | 254 | 4 | 0 | 1 | 254 | 12 | 265 | 0.0 | 516 |
| MS.gene48347.t1 | MTR_8g099995 | 54.114 | 316 | 141 | 2 | 1 | 314 | 1 | 314 | 3.35e-121 | 352 |
| MS.gene48347.t1 | MTR_7g099850 | 48.916 | 323 | 160 | 3 | 1 | 322 | 1 | 319 | 2.98e-102 | 304 |
| MS.gene48347.t1 | MTR_1g068970 | 48.137 | 322 | 163 | 2 | 1 | 322 | 1 | 318 | 9.56e-102 | 302 |
| MS.gene48347.t1 | MTR_8g098415 | 44.444 | 315 | 171 | 2 | 7 | 321 | 2 | 312 | 2.27e-90 | 273 |
| MS.gene48347.t1 | MTR_8g098415 | 45.130 | 308 | 165 | 2 | 7 | 314 | 2 | 305 | 2.82e-90 | 273 |
| MS.gene48347.t1 | MTR_6g053550 | 47.742 | 310 | 157 | 2 | 14 | 321 | 17 | 323 | 3.63e-90 | 273 |
| MS.gene48347.t1 | MTR_1g100395 | 46.795 | 312 | 162 | 2 | 13 | 324 | 8 | 315 | 5.24e-90 | 272 |
| MS.gene48347.t1 | MTR_1g100305 | 43.910 | 312 | 171 | 2 | 13 | 324 | 8 | 315 | 6.11e-85 | 259 |
| MS.gene48347.t1 | MTR_1g100335 | 44.231 | 312 | 170 | 2 | 13 | 324 | 8 | 315 | 1.76e-83 | 256 |
| MS.gene48347.t1 | MTR_1g100315 | 43.269 | 312 | 173 | 2 | 13 | 324 | 8 | 315 | 4.70e-82 | 252 |
| MS.gene48347.t1 | MTR_1g068970 | 44.841 | 252 | 138 | 1 | 71 | 322 | 1 | 251 | 2.85e-72 | 225 |
| MS.gene48347.t1 | MTR_6g053600 | 45.660 | 265 | 139 | 3 | 15 | 277 | 4 | 265 | 4.98e-69 | 218 |
| MS.gene48347.t1 | MTR_8g098415 | 42.972 | 249 | 141 | 1 | 66 | 314 | 1 | 248 | 1.99e-68 | 215 |
| MS.gene48347.t1 | MTR_1g100335 | 46.774 | 248 | 129 | 1 | 13 | 260 | 8 | 252 | 7.76e-66 | 209 |
| MS.gene48347.t1 | MTR_1g100335 | 45.968 | 248 | 130 | 2 | 13 | 260 | 8 | 251 | 1.60e-65 | 208 |
| MS.gene48347.t1 | MTR_8g098415 | 47.489 | 219 | 112 | 1 | 7 | 225 | 2 | 217 | 1.37e-61 | 196 |
| MS.gene48347.t1 | MTR_8g022500 | 51.200 | 125 | 36 | 1 | 28 | 152 | 417 | 516 | 3.89e-29 | 117 |
| MS.gene48347.t1 | MTR_3g009190 | 29.508 | 305 | 192 | 8 | 34 | 321 | 59 | 357 | 4.77e-28 | 112 |
| MS.gene48347.t1 | MTR_3g009190 | 29.508 | 305 | 192 | 8 | 34 | 321 | 77 | 375 | 6.41e-28 | 112 |
| MS.gene48347.t1 | MTR_6g453040 | 29.180 | 305 | 193 | 8 | 34 | 321 | 37 | 335 | 1.13e-27 | 111 |
| MS.gene48347.t1 | MTR_3g091070 | 30.263 | 304 | 171 | 9 | 35 | 321 | 38 | 317 | 1.41e-27 | 110 |
| MS.gene48347.t1 | MTR_6g041980 | 29.730 | 259 | 167 | 6 | 41 | 298 | 70 | 314 | 8.81e-26 | 105 |
| MS.gene48347.t1 | MTR_3g009190 | 29.252 | 294 | 185 | 8 | 45 | 321 | 69 | 356 | 9.39e-25 | 103 |
| MS.gene48347.t1 | MTR_6g081020 | 28.481 | 316 | 186 | 10 | 29 | 317 | 51 | 353 | 1.87e-23 | 100 |
| MS.gene48347.t1 | MTR_2g079710 | 27.329 | 322 | 182 | 12 | 39 | 321 | 88 | 396 | 1.03e-20 | 92.4 |
| MS.gene48347.t1 | MTR_6g041980 | 28.804 | 184 | 124 | 2 | 41 | 224 | 70 | 246 | 8.37e-19 | 85.1 |
| MS.gene48347.t1 | MTR_6g453040 | 30.693 | 202 | 125 | 4 | 34 | 224 | 59 | 256 | 1.13e-16 | 79.7 |
| MS.gene48347.t1 | MTR_3g098470 | 28.912 | 294 | 151 | 11 | 40 | 297 | 37 | 308 | 1.93e-16 | 79.3 |
| MS.gene48347.t1 | MTR_1g051165 | 31.651 | 218 | 113 | 7 | 41 | 245 | 20 | 214 | 7.43e-16 | 77.0 |
| MS.gene48347.t1 | MTR_4g058840 | 27.969 | 261 | 158 | 8 | 41 | 292 | 17 | 256 | 1.27e-15 | 76.3 |
| MS.gene48347.t1 | MTR_4g058820 | 27.969 | 261 | 158 | 8 | 41 | 292 | 17 | 256 | 1.27e-15 | 76.3 |
| MS.gene48347.t1 | MTR_4g087460 | 27.000 | 300 | 171 | 7 | 40 | 305 | 24 | 309 | 3.18e-14 | 72.8 |
| MS.gene48347.t1 | MTR_7g076660 | 27.907 | 301 | 138 | 12 | 40 | 292 | 9 | 278 | 3.19e-14 | 72.4 |
| MS.gene48347.t1 | MTR_7g076660 | 27.907 | 301 | 138 | 12 | 40 | 292 | 10 | 279 | 3.79e-14 | 72.4 |
| MS.gene48347.t1 | MTR_8g031610 | 26.433 | 314 | 154 | 11 | 36 | 297 | 3 | 291 | 4.52e-14 | 72.0 |
| MS.gene48347.t1 | MTR_6g453040 | 29.787 | 188 | 117 | 4 | 34 | 210 | 59 | 242 | 2.43e-13 | 69.3 |
| MS.gene48347.t1 | MTR_5g062280 | 24.920 | 313 | 163 | 11 | 36 | 299 | 5 | 294 | 4.06e-13 | 69.3 |
| MS.gene48347.t1 | MTR_8g031630 | 25.321 | 312 | 153 | 11 | 40 | 297 | 9 | 294 | 4.31e-12 | 66.2 |
| MS.gene48347.t1 | MTR_8g089575 | 34.965 | 143 | 84 | 3 | 40 | 178 | 50 | 187 | 1.21e-11 | 65.1 |
| MS.gene48347.t1 | MTR_8g031650 | 25.163 | 306 | 149 | 11 | 41 | 292 | 104 | 383 | 1.61e-11 | 65.1 |
| MS.gene48347.t1 | MTR_7g076655 | 25.806 | 279 | 149 | 9 | 40 | 280 | 9 | 267 | 1.88e-11 | 64.3 |
| MS.gene48347.t1 | MTR_8g031650 | 25.769 | 260 | 129 | 8 | 40 | 245 | 9 | 258 | 2.55e-11 | 65.1 |
| MS.gene48347.t1 | MTR_8g031650 | 25.080 | 311 | 153 | 11 | 41 | 297 | 270 | 554 | 2.55e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48347.t1 | AT5G50130 | 72.404 | 337 | 91 | 2 | 1 | 336 | 1 | 336 | 2.76e-175 | 490 |
| MS.gene48347.t1 | AT5G50130 | 71.284 | 296 | 85 | 0 | 41 | 336 | 7 | 302 | 7.27e-153 | 432 |
| MS.gene48347.t1 | AT5G50130 | 71.044 | 297 | 85 | 1 | 41 | 336 | 7 | 303 | 1.54e-151 | 428 |
| MS.gene48347.t1 | AT5G50130 | 76.619 | 278 | 63 | 2 | 1 | 277 | 1 | 277 | 1.65e-151 | 429 |
| MS.gene48347.t1 | AT5G50130 | 76.344 | 279 | 63 | 3 | 1 | 277 | 1 | 278 | 5.68e-150 | 425 |
| MS.gene48347.t1 | AT5G50130 | 76.265 | 257 | 60 | 1 | 1 | 257 | 1 | 256 | 1.26e-140 | 399 |
| MS.gene48347.t1 | AT5G50130 | 75.969 | 258 | 60 | 2 | 1 | 257 | 1 | 257 | 3.91e-139 | 395 |
| MS.gene48347.t1 | AT5G50130 | 75.630 | 238 | 57 | 1 | 41 | 277 | 7 | 244 | 4.77e-128 | 368 |
| MS.gene48347.t1 | AT5G50130 | 75.314 | 239 | 57 | 2 | 41 | 277 | 7 | 245 | 1.16e-126 | 365 |
| MS.gene48347.t1 | AT4G24050 | 54.747 | 316 | 138 | 2 | 1 | 314 | 1 | 313 | 6.30e-122 | 354 |
| MS.gene48347.t1 | AT1G64590 | 53.293 | 334 | 141 | 3 | 1 | 322 | 1 | 331 | 5.01e-106 | 314 |
| MS.gene48347.t1 | AT4G24050 | 53.763 | 279 | 122 | 3 | 1 | 277 | 1 | 274 | 2.78e-101 | 300 |
| MS.gene48347.t1 | AT5G02540 | 48.632 | 329 | 165 | 2 | 3 | 331 | 2 | 326 | 2.35e-94 | 284 |
| MS.gene48347.t1 | AT2G37540 | 47.604 | 313 | 160 | 2 | 3 | 315 | 2 | 310 | 2.61e-94 | 283 |
| MS.gene48347.t1 | AT4G23420 | 43.631 | 314 | 174 | 1 | 7 | 320 | 2 | 312 | 1.88e-87 | 266 |
| MS.gene48347.t1 | AT4G23420 | 43.631 | 314 | 174 | 1 | 7 | 320 | 2 | 312 | 1.88e-87 | 266 |
| MS.gene48347.t1 | AT4G23430 | 42.857 | 329 | 180 | 2 | 7 | 335 | 2 | 322 | 1.02e-86 | 264 |
| MS.gene48347.t1 | AT4G23420 | 44.118 | 306 | 168 | 1 | 15 | 320 | 27 | 329 | 3.94e-86 | 263 |
| MS.gene48347.t1 | AT4G11410 | 45.695 | 302 | 160 | 2 | 13 | 314 | 8 | 305 | 4.56e-85 | 260 |
| MS.gene48347.t1 | AT4G23430 | 43.161 | 329 | 177 | 4 | 7 | 335 | 2 | 320 | 1.21e-84 | 259 |
| MS.gene48347.t1 | AT4G23430 | 40.122 | 329 | 179 | 3 | 7 | 335 | 2 | 312 | 5.51e-76 | 236 |
| MS.gene48347.t1 | AT2G37540 | 48.980 | 245 | 122 | 1 | 3 | 247 | 2 | 243 | 7.75e-75 | 232 |
| MS.gene48347.t1 | AT4G23430 | 40.426 | 329 | 176 | 5 | 7 | 335 | 2 | 310 | 5.14e-74 | 231 |
| MS.gene48347.t1 | AT4G11410 | 46.341 | 246 | 129 | 1 | 13 | 258 | 8 | 250 | 1.98e-69 | 218 |
| MS.gene48347.t1 | AT4G23420 | 43.182 | 264 | 147 | 1 | 7 | 270 | 2 | 262 | 3.78e-69 | 217 |
| MS.gene48347.t1 | AT4G23420 | 46.444 | 239 | 125 | 1 | 7 | 245 | 2 | 237 | 6.74e-68 | 214 |
| MS.gene48347.t1 | AT4G09750 | 29.021 | 286 | 183 | 6 | 20 | 298 | 19 | 291 | 2.10e-28 | 112 |
| MS.gene48347.t1 | AT4G27760 | 31.847 | 314 | 180 | 10 | 31 | 321 | 49 | 351 | 7.80e-26 | 106 |
| MS.gene48347.t1 | AT5G53090 | 31.310 | 313 | 181 | 10 | 32 | 321 | 49 | 350 | 1.08e-24 | 103 |
| MS.gene48347.t1 | AT5G15940 | 29.667 | 300 | 186 | 8 | 41 | 322 | 64 | 356 | 3.47e-24 | 102 |
| MS.gene48347.t1 | AT5G15940 | 29.667 | 300 | 186 | 8 | 41 | 322 | 64 | 356 | 3.47e-24 | 102 |
| MS.gene48347.t1 | AT5G15940 | 30.000 | 300 | 185 | 8 | 41 | 322 | 63 | 355 | 3.50e-24 | 102 |
| MS.gene48347.t1 | AT5G04070 | 29.967 | 307 | 183 | 11 | 41 | 327 | 62 | 356 | 7.05e-24 | 100 |
| MS.gene48347.t1 | AT1G03630 | 29.430 | 316 | 182 | 12 | 39 | 321 | 89 | 396 | 2.96e-23 | 99.8 |
| MS.gene48347.t1 | AT1G03630 | 29.430 | 316 | 182 | 12 | 39 | 321 | 91 | 398 | 3.30e-23 | 99.8 |
| MS.gene48347.t1 | AT5G54190 | 26.433 | 314 | 191 | 12 | 41 | 321 | 96 | 402 | 9.35e-23 | 98.6 |
| MS.gene48347.t1 | AT5G53100 | 29.773 | 309 | 184 | 9 | 36 | 321 | 43 | 341 | 2.04e-22 | 97.1 |
| MS.gene48347.t1 | AT5G15940 | 30.916 | 262 | 156 | 8 | 41 | 284 | 64 | 318 | 3.02e-22 | 95.9 |
| MS.gene48347.t1 | AT4G27440 | 28.662 | 314 | 184 | 12 | 41 | 321 | 92 | 398 | 5.19e-22 | 96.3 |
| MS.gene48347.t1 | AT4G27440 | 28.662 | 314 | 184 | 12 | 41 | 321 | 92 | 398 | 5.19e-22 | 96.3 |
| MS.gene48347.t1 | AT3G46170 | 26.829 | 287 | 173 | 10 | 17 | 292 | 11 | 271 | 3.62e-16 | 78.2 |
| MS.gene48347.t1 | AT1G63380 | 28.571 | 238 | 139 | 8 | 18 | 248 | 8 | 221 | 3.06e-15 | 75.5 |
| MS.gene48347.t1 | AT3G55290 | 32.394 | 213 | 119 | 8 | 41 | 248 | 24 | 216 | 6.21e-15 | 74.3 |
| MS.gene48347.t1 | AT3G55290 | 32.394 | 213 | 119 | 8 | 41 | 248 | 23 | 215 | 6.62e-15 | 74.3 |
| MS.gene48347.t1 | AT5G61830 | 25.256 | 293 | 166 | 8 | 40 | 297 | 39 | 313 | 8.50e-15 | 74.7 |
| MS.gene48347.t1 | AT5G61830 | 25.256 | 293 | 166 | 8 | 40 | 297 | 39 | 313 | 8.50e-15 | 74.7 |
| MS.gene48347.t1 | AT1G63380 | 28.879 | 232 | 134 | 8 | 24 | 248 | 9 | 216 | 1.48e-14 | 73.6 |
| MS.gene48347.t1 | AT1G63380 | 28.879 | 232 | 134 | 8 | 24 | 248 | 11 | 218 | 1.51e-14 | 73.6 |
| MS.gene48347.t1 | AT1G63380 | 28.879 | 232 | 134 | 8 | 24 | 248 | 7 | 214 | 1.54e-14 | 73.2 |
| MS.gene48347.t1 | AT3G55310 | 31.466 | 232 | 127 | 9 | 24 | 248 | 9 | 215 | 2.11e-14 | 72.8 |
| MS.gene48347.t1 | AT1G62610 | 29.694 | 229 | 130 | 9 | 24 | 245 | 7 | 211 | 6.32e-14 | 71.6 |
| MS.gene48347.t1 | AT1G62610 | 29.694 | 229 | 130 | 9 | 24 | 245 | 5 | 209 | 7.00e-14 | 71.2 |
| MS.gene48347.t1 | AT1G62610 | 29.310 | 232 | 133 | 9 | 24 | 248 | 11 | 218 | 7.19e-14 | 71.2 |
| MS.gene48347.t1 | AT1G62610 | 29.310 | 232 | 133 | 9 | 24 | 248 | 6 | 213 | 7.21e-14 | 71.2 |
| MS.gene48347.t1 | AT3G03980 | 29.114 | 237 | 125 | 9 | 26 | 243 | 1 | 213 | 1.00e-12 | 67.8 |
Find 50 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCAGGGCCTAGTGGTTT+TGG | 0.230469 | 8.3:-17411095 | MS.gene48347:CDS |
| ACACTTACATGAGAATATTA+AGG | 0.272671 | 8.3:+17410572 | None:intergenic |
| GAAGGGAACAATAAGGTATT+TGG | 0.288975 | 8.3:-17411123 | MS.gene48347:CDS |
| TCAATTGAAGGTGCTACTTC+TGG | 0.308401 | 8.3:-17410799 | MS.gene48347:intron |
| AGGTATTTGGCAGGCATTGC+AGG | 0.316972 | 8.3:-17411110 | MS.gene48347:CDS |
| TTATGCTGAGGTTATTCTAT+TGG | 0.355615 | 8.3:-17410662 | MS.gene48347:CDS |
| ATGAGAGCTGTTAGGTTTGA+AGG | 0.360069 | 8.3:+17411023 | None:intergenic |
| GAAGGTGCTACTTCTGGTAT+TGG | 0.364873 | 8.3:-17410793 | MS.gene48347:intron |
| TGGTGCCAGGGACATGAAAA+AGG | 0.383783 | 8.3:-17410722 | MS.gene48347:CDS |
| TTTCTTCAGTAATTCATAGC+TGG | 0.397861 | 8.3:-17408633 | MS.gene48347:CDS |
| CGACTTAGACAAGCAGCAAT+TGG | 0.406522 | 8.3:-17407754 | MS.gene48347:CDS |
| GCAAATAAAACAGGCATTCA+AGG | 0.411603 | 8.3:-17408670 | MS.gene48347:CDS |
| TGAGAGTTGTGGTTGGTGCC+AGG | 0.429651 | 8.3:-17410735 | MS.gene48347:CDS |
| TTCTTCAGTAATTCATAGCT+GGG | 0.432368 | 8.3:-17408632 | MS.gene48347:CDS |
| CAGCATAAGGACTCTCCTCT+TGG | 0.434439 | 8.3:+17410677 | None:intergenic |
| ATTCCTGTCTTCACAATGCC+TGG | 0.434455 | 8.3:+17408214 | None:intergenic |
| CATCGATGAAGGGAACAATA+AGG | 0.437595 | 8.3:-17411130 | None:intergenic |
| TTCCTTCACATGCAGAATCA+TGG | 0.450116 | 8.3:+17408421 | None:intergenic |
| ATAGATACTGCAAATAAAAC+AGG | 0.452810 | 8.3:-17408679 | MS.gene48347:CDS |
| ACATTTGCTACAAATTACTT+AGG | 0.455021 | 8.3:-17410191 | MS.gene48347:intron |
| GCACACAAGGGCTTAATAAC+GGG | 0.462839 | 8.3:-17408184 | MS.gene48347:intron |
| CACTTACATGAGAATATTAA+GGG | 0.464360 | 8.3:+17410573 | None:intergenic |
| AATAGAATAACCTCAGCATA+AGG | 0.472498 | 8.3:+17410664 | None:intergenic |
| AGCACACAAGGGCTTAATAA+CGG | 0.480180 | 8.3:-17408185 | MS.gene48347:CDS |
| TACCAGTGATGAGAGCTGTT+AGG | 0.489625 | 8.3:+17411015 | None:intergenic |
| TGCTTTAAAGACATGCTCAC+TGG | 0.492898 | 8.3:-17408592 | MS.gene48347:CDS |
| GGAAATGGCTAGACAACTAA+AGG | 0.519535 | 8.3:-17408402 | MS.gene48347:intron |
| TGAGAGCTGTTAGGTTTGAA+GGG | 0.521862 | 8.3:+17411024 | None:intergenic |
| AGATACATGGTCTAGAATAG+AGG | 0.530017 | 8.3:+17407719 | None:intergenic |
| GATTCTGCATGTGAAGGAAA+TGG | 0.534551 | 8.3:-17408417 | MS.gene48347:CDS |
| AACCTAACAGCTCTCATCAC+TGG | 0.543509 | 8.3:-17411017 | MS.gene48347:intron |
| ACTATCAATGCAGTGCATCC+AGG | 0.545366 | 8.3:-17408232 | MS.gene48347:CDS |
| CATCCAGGCATTGTGAAGAC+AGG | 0.549477 | 8.3:-17408217 | MS.gene48347:CDS |
| GAGAGTTGTGGTTGGTGCCA+GGG | 0.563988 | 8.3:-17410734 | MS.gene48347:CDS |
| GAATTTGAGCCAAAACCACT+AGG | 0.566141 | 8.3:+17411086 | None:intergenic |
| GCAGGCATTGCAGGGCCTAG+TGG | 0.577354 | 8.3:-17411101 | MS.gene48347:CDS |
| GATACATGGTCTAGAATAGA+GGG | 0.578220 | 8.3:+17407720 | None:intergenic |
| GGTATTTGGCAGGCATTGCA+GGG | 0.578276 | 8.3:-17411109 | MS.gene48347:CDS |
| GAGCTGTTAGGTTTGAAGGG+AGG | 0.584163 | 8.3:+17411027 | None:intergenic |
| AGCCATGATTCTGCATGTGA+AGG | 0.585391 | 8.3:-17408423 | MS.gene48347:CDS |
| AGGAATTATTAGAGCACACA+AGG | 0.596908 | 8.3:-17408197 | MS.gene48347:CDS |
| GGAACAATAAGGTATTTGGC+AGG | 0.598423 | 8.3:-17411119 | MS.gene48347:CDS |
| AAAAGGGAATCATCGATGAA+GGG | 0.604378 | 8.3:-17411140 | None:intergenic |
| GCTGCTCAAAACGATATCAC+AGG | 0.618153 | 8.3:-17408035 | MS.gene48347:intron |
| AGGAGTGTACTCTCATAACC+TGG | 0.628213 | 8.3:-17410240 | MS.gene48347:CDS |
| ATGCACGGTGTCTAGATACA+TGG | 0.629660 | 8.3:+17407706 | None:intergenic |
| AGAGGAGTGAGAGTTGTGGT+TGG | 0.631623 | 8.3:-17410742 | MS.gene48347:CDS |
| AGAGGAGAGTCCTTATGCTG+AGG | 0.678257 | 8.3:-17410674 | MS.gene48347:CDS |
| ACTTACATGAGAATATTAAG+GGG | 0.701725 | 8.3:+17410574 | None:intergenic |
| GGAATTATTAGAGCACACAA+GGG | 0.746983 | 8.3:-17408196 | MS.gene48347:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAAAAACTAAAGTAA+TGG | - | chr8.3:17409613-17409632 | MS.gene48347:intron | 10.0% |
| !!! | ACTAATATTTTTTTGAATAT+TGG | - | chr8.3:17410556-17410575 | MS.gene48347:intron | 10.0% |
| !!! | ATGAAATTTTTGAAAATATA+TGG | + | chr8.3:17410758-17410777 | None:intergenic | 10.0% |
| !!! | CTAATATTTTTTTGAATATT+GGG | - | chr8.3:17410557-17410576 | MS.gene48347:intron | 10.0% |
| !!! | TACATTTTTGAATATTATTT+TGG | + | chr8.3:17409308-17409327 | None:intergenic | 10.0% |
| !! | TTAATGTATTATTCATACAT+AGG | + | chr8.3:17409535-17409554 | None:intergenic | 15.0% |
| !!! | AATGAATATATGTTTTGTTT+TGG | - | chr8.3:17408015-17408034 | MS.gene48347:intron | 15.0% |
| !!! | TACAAAGAGAAATATTTTAA+CGG | + | chr8.3:17409093-17409112 | None:intergenic | 15.0% |
| !!! | TCTATGCATTAATTAAATTT+TGG | - | chr8.3:17410327-17410346 | MS.gene48347:intron | 15.0% |
| !!! | TTGTTTCAAACAATTTTATA+TGG | - | chr8.3:17410717-17410736 | MS.gene48347:CDS | 15.0% |
| !! | AAAAAAAAAACAAAACCATG+AGG | - | chr8.3:17408819-17408838 | MS.gene48347:intron | 20.0% |
| !! | AACAAAAATGTAGTTACAAT+GGG | - | chr8.3:17410370-17410389 | MS.gene48347:intron | 20.0% |
| !! | ATTGTTAATTCATATAGTTG+TGG | + | chr8.3:17409822-17409841 | None:intergenic | 20.0% |
| !! | CATGAAGTATAGTAAAAATT+AGG | - | chr8.3:17409488-17409507 | MS.gene48347:intron | 20.0% |
| !! | GAATATTGGGAAATAATTAT+AGG | - | chr8.3:17410570-17410589 | MS.gene48347:intron | 20.0% |
| !! | GTCATATCATATATGATTAA+GGG | - | chr8.3:17410511-17410530 | MS.gene48347:intron | 20.0% |
| !! | TAACAAAAATGTAGTTACAA+TGG | - | chr8.3:17410369-17410388 | MS.gene48347:intron | 20.0% |
| !! | TGTCATATCATATATGATTA+AGG | - | chr8.3:17410510-17410529 | MS.gene48347:intron | 20.0% |
| !! | TTGAAAATATATGGCTTAAT+TGG | + | chr8.3:17410749-17410768 | None:intergenic | 20.0% |
| !!! | AACATTTTTGAAAGCTAATT+TGG | - | chr8.3:17409946-17409965 | MS.gene48347:intron | 20.0% |
| !!! | AATTTGTTTGAATTAGAAGA+AGG | - | chr8.3:17410008-17410027 | MS.gene48347:intron | 20.0% |
| !!! | CTAATTTTTACTATACTTCA+TGG | + | chr8.3:17409490-17409509 | None:intergenic | 20.0% |
| ! | AAATATTAAGGCAATTTGAG+AGG | + | chr8.3:17410483-17410502 | None:intergenic | 25.0% |
| ! | AAGCATAAGAAATGACAATA+AGG | + | chr8.3:17408315-17408334 | None:intergenic | 25.0% |
| ! | ACACAATATAATCACAATTG+AGG | + | chr8.3:17408442-17408461 | None:intergenic | 25.0% |
| ! | ACACTTACATGAGAATATTA+AGG | + | chr8.3:17408273-17408292 | None:intergenic | 25.0% |
| ! | ACTTACATGAGAATATTAAG+GGG | + | chr8.3:17408271-17408290 | None:intergenic | 25.0% |
| ! | ATAGATACTGCAAATAAAAC+AGG | - | chr8.3:17410163-17410182 | MS.gene48347:intron | 25.0% |
| ! | ATTCGTAAAATATAACGAGT+TGG | - | chr8.3:17409736-17409755 | MS.gene48347:intron | 25.0% |
| ! | ATTGTGATTATATTGTGTTG+TGG | - | chr8.3:17408444-17408463 | MS.gene48347:CDS | 25.0% |
| ! | CACTTACATGAGAATATTAA+GGG | + | chr8.3:17408272-17408291 | None:intergenic | 25.0% |
| ! | GAAGATAAGTTCAATATGTT+AGG | + | chr8.3:17408997-17409016 | None:intergenic | 25.0% |
| ! | GTCTTTAACACATTGTTTAA+GGG | + | chr8.3:17409271-17409290 | None:intergenic | 25.0% |
| ! | TAGCTTTCAAAAATGTTTCA+TGG | + | chr8.3:17409943-17409962 | None:intergenic | 25.0% |
| ! | TCATGAAAAATTGAGAATGT+TGG | - | chr8.3:17409421-17409440 | MS.gene48347:intron | 25.0% |
| ! | TGACAAGAGCAAAAATATTA+AGG | + | chr8.3:17410495-17410514 | None:intergenic | 25.0% |
| ! | TGCAAGTATATACATAATAC+TGG | + | chr8.3:17407963-17407982 | None:intergenic | 25.0% |
| ! | TGTCTTTAACACATTGTTTA+AGG | + | chr8.3:17409272-17409291 | None:intergenic | 25.0% |
| ! | TTAATAAAAGTAAAGACACG+CGG | + | chr8.3:17409043-17409062 | None:intergenic | 25.0% |
| ! | TTCGTAAAATATAACGAGTT+GGG | - | chr8.3:17409737-17409756 | MS.gene48347:intron | 25.0% |
| ! | TTTATGTATATCGGACTAAA+CGG | + | chr8.3:17409687-17409706 | None:intergenic | 25.0% |
| ! | TTTGTTAACAAAAATGCTAC+TGG | - | chr8.3:17410132-17410151 | MS.gene48347:intron | 25.0% |
| !! | AACTCGTTATATTTTACGAA+TGG | + | chr8.3:17409737-17409756 | None:intergenic | 25.0% |
| !! | ACATTTGCTACAAATTACTT+AGG | - | chr8.3:17408651-17408670 | MS.gene48347:CDS | 25.0% |
| !! | ATTCAGGATTTTCAGTTAAT+GGG | - | chr8.3:17408851-17408870 | MS.gene48347:intron | 25.0% |
| !! | CAAATCTAAAGCTAAAAACT+CGG | + | chr8.3:17408248-17408267 | None:intergenic | 25.0% |
| !! | GCATTTTTGTCTTTTGTTAA+GGG | + | chr8.3:17408772-17408791 | None:intergenic | 25.0% |
| !! | TGCATTTTTGTCTTTTGTTA+AGG | + | chr8.3:17408773-17408792 | None:intergenic | 25.0% |
| !! | TGTCAATTCAATTTTCTCTT+CGG | + | chr8.3:17408634-17408653 | None:intergenic | 25.0% |
| !! | TTCTTAATTTTGCAGAGAAA+AGG | + | chr8.3:17410301-17410320 | None:intergenic | 25.0% |
| !! | TTTTCATTCTTACATATGAG+AGG | - | chr8.3:17408679-17408698 | MS.gene48347:CDS | 25.0% |
| !!! | GTTTTGGAATTTTCAATTGA+AGG | - | chr8.3:17408031-17408050 | MS.gene48347:intron | 25.0% |
| AAAACTAAAGTAATGGTGCA+TGG | - | chr8.3:17409620-17409639 | MS.gene48347:intron | 30.0% | |
| AATAGAATAACCTCAGCATA+AGG | + | chr8.3:17408181-17408200 | None:intergenic | 30.0% | |
| AATGTACCTACCTAATTAGA+AGG | + | chr8.3:17409586-17409605 | None:intergenic | 30.0% | |
| AGTGAAAGAAAAAATCCAAG+AGG | - | chr8.3:17408150-17408169 | MS.gene48347:intron | 30.0% | |
| ATATATGTTTGCACTTTGCA+GGG | - | chr8.3:17410908-17410927 | MS.gene48347:intron | 30.0% | |
| CTTCGATGCAATAAAAAACA+AGG | + | chr8.3:17410788-17410807 | None:intergenic | 30.0% | |
| GAAAAATTGAGAATGTTGGT+GGG | - | chr8.3:17409425-17409444 | MS.gene48347:intron | 30.0% | |
| TATATATGTTTGCACTTTGC+AGG | - | chr8.3:17410907-17410926 | MS.gene48347:intron | 30.0% | |
| TCGTAAAATATAACGAGTTG+GGG | - | chr8.3:17409738-17409757 | MS.gene48347:intron | 30.0% | |
| TGAAAAATTGAGAATGTTGG+TGG | - | chr8.3:17409424-17409443 | MS.gene48347:intron | 30.0% | |
| TTAGCACAACATGAATTAAC+AGG | + | chr8.3:17408540-17408559 | None:intergenic | 30.0% | |
| TTATGCTGAGGTTATTCTAT+TGG | - | chr8.3:17408180-17408199 | MS.gene48347:intron | 30.0% | |
| TTATGTATATCGGACTAAAC+GGG | + | chr8.3:17409686-17409705 | None:intergenic | 30.0% | |
| TTCTTCAGTAATTCATAGCT+GGG | - | chr8.3:17410210-17410229 | MS.gene48347:CDS | 30.0% | |
| TTCTTGTGTTCTTAAATTGC+AGG | - | chr8.3:17410103-17410122 | MS.gene48347:intron | 30.0% | |
| TTGGGAAATAATTATAGGCA+AGG | - | chr8.3:17410575-17410594 | MS.gene48347:intron | 30.0% | |
| TTTCTTCAGTAATTCATAGC+TGG | - | chr8.3:17410209-17410228 | MS.gene48347:CDS | 30.0% | |
| ! | GATTCAGGATTTTCAGTTAA+TGG | - | chr8.3:17408850-17408869 | MS.gene48347:intron | 30.0% |
| ! | TCTGACTACAATTTAAAACC+CGG | + | chr8.3:17408370-17408389 | None:intergenic | 30.0% |
| ! | TGATGACATCATTTTCACTA+TGG | - | chr8.3:17408935-17408954 | MS.gene48347:intron | 30.0% |
| ! | TTCAGGATTTTCAGTTAATG+GGG | - | chr8.3:17408852-17408871 | MS.gene48347:intron | 30.0% |
| ! | TTTTTACTATACTTCATGGC+AGG | + | chr8.3:17409486-17409505 | None:intergenic | 30.0% |
| !! | TATTGTTGATTCAAGTTGAG+TGG | + | chr8.3:17409870-17409889 | None:intergenic | 30.0% |
| ACGTGCGAGTTTATGTATAT+CGG | + | chr8.3:17409696-17409715 | None:intergenic | 35.0% | |
| AGAAAAGAATACCCACAGAT+AGG | - | chr8.3:17410034-17410053 | MS.gene48347:intron | 35.0% | |
| AGGAATTATTAGAGCACACA+AGG | - | chr8.3:17410645-17410664 | MS.gene48347:CDS | 35.0% | |
| ATTAAGATCCCTATTCACCA+TGG | + | chr8.3:17410888-17410907 | None:intergenic | 35.0% | |
| CTCTAAGCCAAAAAATCGAA+GGG | - | chr8.3:17410954-17410973 | MS.gene48347:intron | 35.0% | |
| GAGACAGACAAAATCATTCA+AGG | + | chr8.3:17409564-17409583 | None:intergenic | 35.0% | |
| GCAAATAAAACAGGCATTCA+AGG | - | chr8.3:17410172-17410191 | MS.gene48347:intron | 35.0% | |
| GGAATTATTAGAGCACACAA+GGG | - | chr8.3:17410646-17410665 | MS.gene48347:CDS | 35.0% | |
| GTGATTAATCAAGTATCCCA+GGG | - | chr8.3:17409899-17409918 | MS.gene48347:intron | 35.0% | |
| GTTAAGGGCTACAAACTAAA+GGG | + | chr8.3:17408757-17408776 | None:intergenic | 35.0% | |
| TATGTATATCGGACTAAACG+GGG | + | chr8.3:17409685-17409704 | None:intergenic | 35.0% | |
| TATTCATACATAGGTCACCT+AGG | + | chr8.3:17409526-17409545 | None:intergenic | 35.0% | |
| TCATCCATCAGTTGAGAAAA+GGG | - | chr8.3:17408340-17408359 | MS.gene48347:intron | 35.0% | |
| TCTAAGCCAAAAAATCGAAG+GGG | - | chr8.3:17410955-17410974 | MS.gene48347:intron | 35.0% | |
| TGATTAATCAAGTATCCCAG+GGG | - | chr8.3:17409900-17409919 | MS.gene48347:intron | 35.0% | |
| TGCAGAGAAAAGGAAACAAA+TGG | + | chr8.3:17410291-17410310 | None:intergenic | 35.0% | |
| TGTTAAGGGCTACAAACTAA+AGG | + | chr8.3:17408758-17408777 | None:intergenic | 35.0% | |
| TTCATCCATCAGTTGAGAAA+AGG | - | chr8.3:17408339-17408358 | MS.gene48347:intron | 35.0% | |
| TTGTCTGTCTCCTTCTAATT+AGG | - | chr8.3:17409573-17409592 | MS.gene48347:intron | 35.0% | |
| TTTCCAAACCATGGTGAATA+GGG | - | chr8.3:17410877-17410896 | MS.gene48347:intron | 35.0% | |
| ! | AGATACATGGTCTAGAATAG+AGG | + | chr8.3:17411126-17411145 | None:intergenic | 35.0% |
| ! | GAAGGGAACAATAAGGTATT+TGG | - | chr8.3:17407719-17407738 | MS.gene48347:CDS | 35.0% |
| ! | GATACATGGTCTAGAATAGA+GGG | + | chr8.3:17411125-17411144 | None:intergenic | 35.0% |
| ! | TCAGGATTTTCAGTTAATGG+GGG | - | chr8.3:17408853-17408872 | MS.gene48347:intron | 35.0% |
| ! | TGTATTGTTCCACAGCTTTT+TGG | + | chr8.3:17411050-17411069 | None:intergenic | 35.0% |
| ! | TTTTCCAAACCATGGTGAAT+AGG | - | chr8.3:17410876-17410895 | MS.gene48347:intron | 35.0% |
| !! | TTGTTTTGCAGAAACAATGC+AGG | - | chr8.3:17408582-17408601 | MS.gene48347:intron | 35.0% |
| !!! | TACCTTTGTTTTCCAAACCA+TGG | - | chr8.3:17410868-17410887 | MS.gene48347:intron | 35.0% |
| AAAAAATCGAAGGGGTGAGT+GGG | - | chr8.3:17410963-17410982 | MS.gene48347:intron | 40.0% | |
| AAAAAGAGGAGTGAGAGTTG+TGG | - | chr8.3:17408096-17408115 | MS.gene48347:intron | 40.0% | |
| AATCAGAAGCCAAAAAGCTG+TGG | - | chr8.3:17411038-17411057 | MS.gene48347:CDS | 40.0% | |
| ACTATACTTCATGGCAGGAA+CGG | + | chr8.3:17409481-17409500 | None:intergenic | 40.0% | |
| AGATTTGCGACTGCAATCTA+GGG | + | chr8.3:17408500-17408519 | None:intergenic | 40.0% | |
| AGCACACAAGGGCTTAATAA+CGG | - | chr8.3:17410657-17410676 | MS.gene48347:CDS | 40.0% | |
| ATGAGAGCTGTTAGGTTTGA+AGG | + | chr8.3:17407822-17407841 | None:intergenic | 40.0% | |
| CGTGATTAATCAAGTATCCC+AGG | - | chr8.3:17409898-17409917 | MS.gene48347:intron | 40.0% | |
| CTGTCTCCTTCTAATTAGGT+AGG | - | chr8.3:17409577-17409596 | MS.gene48347:intron | 40.0% | |
| GAATTTGAGCCAAAACCACT+AGG | + | chr8.3:17407759-17407778 | None:intergenic | 40.0% | |
| GATTCTGCATGTGAAGGAAA+TGG | - | chr8.3:17410425-17410444 | MS.gene48347:intron | 40.0% | |
| GGAAATGGCTAGACAACTAA+AGG | - | chr8.3:17410440-17410459 | MS.gene48347:intron | 40.0% | |
| GTGTGGAATTCATATTCTGC+TGG | + | chr8.3:17408735-17408754 | None:intergenic | 40.0% | |
| TGAGAGCTGTTAGGTTTGAA+GGG | + | chr8.3:17407821-17407840 | None:intergenic | 40.0% | |
| TTCCTTCACATGCAGAATCA+TGG | + | chr8.3:17410424-17410443 | None:intergenic | 40.0% | |
| ! | ATCCCAGGGGTACAAAAAAA+TGG | - | chr8.3:17409913-17409932 | MS.gene48347:intron | 40.0% |
| ! | ATCTCCCTTTTCTCAACTGA+TGG | + | chr8.3:17408347-17408366 | None:intergenic | 40.0% |
| ! | CACCATGGTTTGGAAAACAA+AGG | + | chr8.3:17410873-17410892 | None:intergenic | 40.0% |
| ! | GCTAGAGTGTTAGCAAAAAG+AGG | - | chr8.3:17408082-17408101 | MS.gene48347:intron | 40.0% |
| ! | GCTCTAAGCCAAAAAATCGA+AGG | - | chr8.3:17410953-17410972 | MS.gene48347:intron | 40.0% |
| ! | GGAACAATAAGGTATTTGGC+AGG | - | chr8.3:17407723-17407742 | MS.gene48347:CDS | 40.0% |
| ! | TTTGTACTGTGTTGATCCGT+GGG | - | chr8.3:17409775-17409794 | MS.gene48347:intron | 40.0% |
| ! | TTTTCTCTTCGGAGAATTCC+AGG | + | chr8.3:17408623-17408642 | None:intergenic | 40.0% |
| !! | GTTGATTCAAGTTGAGTGGA+TGG | + | chr8.3:17409866-17409885 | None:intergenic | 40.0% |
| !! | TCAATTGAAGGTGCTACTTC+TGG | - | chr8.3:17408043-17408062 | MS.gene48347:CDS | 40.0% |
| !! | TGCTTTAAAGACATGCTCAC+TGG | - | chr8.3:17410250-17410269 | MS.gene48347:CDS | 40.0% |
| !!! | AGCCATTTTTTTGTACCCCT+GGG | + | chr8.3:17409918-17409937 | None:intergenic | 40.0% |
| !!! | ATACTAGCTTGTTTTGCCCA+CGG | + | chr8.3:17409794-17409813 | None:intergenic | 40.0% |
| AACCTAACAGCTCTCATCAC+TGG | - | chr8.3:17407825-17407844 | MS.gene48347:CDS | 45.0% | |
| ACAAAACCATGAGGCAGTGA+CGG | - | chr8.3:17408828-17408847 | MS.gene48347:intron | 45.0% | |
| ACTATCAATGCAGTGCATCC+AGG | - | chr8.3:17410610-17410629 | MS.gene48347:CDS | 45.0% | |
| AGCCATGATTCTGCATGTGA+AGG | - | chr8.3:17410419-17410438 | MS.gene48347:intron | 45.0% | |
| AGTTGAGAAAAGGGAGATCC+GGG | - | chr8.3:17408349-17408368 | MS.gene48347:intron | 45.0% | |
| ATAGGCAACAGAGAGGGATT+TGG | - | chr8.3:17410052-17410071 | MS.gene48347:intron | 45.0% | |
| ATCCACGTTGAGGTAATTGG+GGG | + | chr8.3:17409458-17409477 | None:intergenic | 45.0% | |
| ATTCCTGTCTTCACAATGCC+TGG | + | chr8.3:17410631-17410650 | None:intergenic | 45.0% | |
| CAAAAAATCGAAGGGGTGAG+TGG | - | chr8.3:17410962-17410981 | MS.gene48347:intron | 45.0% | |
| CAGTTGAGAAAAGGGAGATC+CGG | - | chr8.3:17408348-17408367 | MS.gene48347:intron | 45.0% | |
| CGACTTAGACAAGCAGCAAT+TGG | - | chr8.3:17411088-17411107 | MS.gene48347:CDS | 45.0% | |
| GAGATTTGCGACTGCAATCT+AGG | + | chr8.3:17408501-17408520 | None:intergenic | 45.0% | |
| GATCCACGTTGAGGTAATTG+GGG | + | chr8.3:17409459-17409478 | None:intergenic | 45.0% | |
| GATCCCTATTCACCATGGTT+TGG | + | chr8.3:17410883-17410902 | None:intergenic | 45.0% | |
| GCACACAAGGGCTTAATAAC+GGG | - | chr8.3:17410658-17410677 | MS.gene48347:CDS | 45.0% | |
| GCTGCTCAAAACGATATCAC+AGG | - | chr8.3:17410807-17410826 | MS.gene48347:intron | 45.0% | |
| GGATCCACGTTGAGGTAATT+GGG | + | chr8.3:17409460-17409479 | None:intergenic | 45.0% | |
| GGGCAAAACAAGCTAGTATG+AGG | - | chr8.3:17409795-17409814 | MS.gene48347:intron | 45.0% | |
| TACCAGTGATGAGAGCTGTT+AGG | + | chr8.3:17407830-17407849 | None:intergenic | 45.0% | |
| TTAGGCTCAAACAGAGTCCT+AGG | - | chr8.3:17409506-17409525 | MS.gene48347:intron | 45.0% | |
| ! | AGGAGTGTACTCTCATAACC+TGG | - | chr8.3:17408602-17408621 | MS.gene48347:CDS | 45.0% |
| ! | ATGGACAGCCACTCTTTTAG+CGG | - | chr8.3:17409639-17409658 | MS.gene48347:intron | 45.0% |
| ! | GTTTGTACTGTGTTGATCCG+TGG | - | chr8.3:17409774-17409793 | MS.gene48347:intron | 45.0% |
| !! | CATAGCCTTTTTCATGTCCC+TGG | + | chr8.3:17408128-17408147 | None:intergenic | 45.0% |
| !! | GAAGGTGCTACTTCTGGTAT+TGG | - | chr8.3:17408049-17408068 | MS.gene48347:CDS | 45.0% |
| !!! | CACTCACCCCTTCGATTTTT+TGG | + | chr8.3:17410964-17410983 | None:intergenic | 45.0% |
| !!! | CAGCCATTTTTTTGTACCCC+TGG | + | chr8.3:17409919-17409938 | None:intergenic | 45.0% |
| !!! | AAATTTTACAAAAATATTTA+TGG | + | chr8.3:17408891-17408910 | None:intergenic | 5.0% |
| !!! | ATAAATTTAATTTTTTTCTT+AGG | + | chr8.3:17409393-17409412 | None:intergenic | 5.0% |
| AGAGGAGAGTCCTTATGCTG+AGG | - | chr8.3:17408168-17408187 | MS.gene48347:intron | 50.0% | |
| AGAGGAGTGAGAGTTGTGGT+TGG | - | chr8.3:17408100-17408119 | MS.gene48347:intron | 50.0% | |
| AGTACCCACCGCTAAAAGAG+TGG | + | chr8.3:17409650-17409669 | None:intergenic | 50.0% | |
| CAGCATAAGGACTCTCCTCT+TGG | + | chr8.3:17408168-17408187 | None:intergenic | 50.0% | |
| CCACAGATAGGCAACAGAGA+GGG | - | chr8.3:17410046-17410065 | MS.gene48347:intron | 50.0% | |
| CCTCTCTGTTGCCTATCTGT+GGG | + | chr8.3:17410048-17410067 | None:intergenic | 50.0% | |
| CGGATCCACGTTGAGGTAAT+TGG | + | chr8.3:17409461-17409480 | None:intergenic | 50.0% | |
| GAGCTGTTAGGTTTGAAGGG+AGG | + | chr8.3:17407818-17407837 | None:intergenic | 50.0% | |
| GGGCTACAAACTAAAGGGTG+TGG | + | chr8.3:17408752-17408771 | None:intergenic | 50.0% | |
| GTATATCGGACTAAACGGGG+CGG | + | chr8.3:17409682-17409701 | None:intergenic | 50.0% | |
| TATATCGGACTAAACGGGGC+GGG | + | chr8.3:17409681-17409700 | None:intergenic | 50.0% | |
| ! | ACAGCCACTCTTTTAGCGGT+GGG | - | chr8.3:17409643-17409662 | MS.gene48347:intron | 50.0% |
| ! | AGGTATTTGGCAGGCATTGC+AGG | - | chr8.3:17407732-17407751 | MS.gene48347:CDS | 50.0% |
| ! | ATTGCAGGGCCTAGTGGTTT+TGG | - | chr8.3:17407747-17407766 | MS.gene48347:CDS | 50.0% |
| ! | CATCCAGGCATTGTGAAGAC+AGG | - | chr8.3:17410625-17410644 | MS.gene48347:CDS | 50.0% |
| ! | GGTATTTGGCAGGCATTGCA+GGG | - | chr8.3:17407733-17407752 | MS.gene48347:CDS | 50.0% |
| ! | TCTTTTAGCGGTGGGTACTC+TGG | - | chr8.3:17409651-17409670 | MS.gene48347:intron | 50.0% |
| ! | TGGTGCCAGGGACATGAAAA+AGG | - | chr8.3:17408120-17408139 | MS.gene48347:intron | 50.0% |
| CCCACAGATAGGCAACAGAG+AGG | - | chr8.3:17410045-17410064 | MS.gene48347:intron | 55.0% | |
| CCCTCTCTGTTGCCTATCTG+TGG | + | chr8.3:17410049-17410068 | None:intergenic | 55.0% | |
| CTGAATCCGTCACTGCCTCA+TGG | + | chr8.3:17408837-17408856 | None:intergenic | 55.0% | |
| TGCCCCCAATTACCTCAACG+TGG | - | chr8.3:17409453-17409472 | MS.gene48347:intron | 55.0% | |
| TTAGCGGTGGGTACTCTGGT+TGG | - | chr8.3:17409655-17409674 | MS.gene48347:intron | 55.0% | |
| ! | GACAGCCACTCTTTTAGCGG+TGG | - | chr8.3:17409642-17409661 | MS.gene48347:intron | 55.0% |
| ! | TGAGAGTTGTGGTTGGTGCC+AGG | - | chr8.3:17408107-17408126 | MS.gene48347:intron | 55.0% |
| !! | CATGAGGCAGTGACGGATTC+AGG | - | chr8.3:17408835-17408854 | MS.gene48347:intron | 55.0% |
| !! | GAGAGTTGTGGTTGGTGCCA+GGG | - | chr8.3:17408108-17408127 | MS.gene48347:intron | 55.0% |
| GCAGGAACGGATCCACGTTG+AGG | + | chr8.3:17409468-17409487 | None:intergenic | 60.0% | |
| ! | GCAGGCATTGCAGGGCCTAG+TGG | - | chr8.3:17407741-17407760 | MS.gene48347:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 17407717 | 17411147 | 17407717 | ID=MS.gene48347 |
| chr8.3 | mRNA | 17407717 | 17411147 | 17407717 | ID=MS.gene48347.t1;Parent=MS.gene48347 |
| chr8.3 | exon | 17411018 | 17411147 | 17411018 | ID=MS.gene48347.t1.exon1;Parent=MS.gene48347.t1 |
| chr8.3 | CDS | 17411018 | 17411147 | 17411018 | ID=cds.MS.gene48347.t1;Parent=MS.gene48347.t1 |
| chr8.3 | exon | 17410580 | 17410811 | 17410580 | ID=MS.gene48347.t1.exon2;Parent=MS.gene48347.t1 |
| chr8.3 | CDS | 17410580 | 17410811 | 17410580 | ID=cds.MS.gene48347.t1;Parent=MS.gene48347.t1 |
| chr8.3 | exon | 17410192 | 17410271 | 17410192 | ID=MS.gene48347.t1.exon3;Parent=MS.gene48347.t1 |
| chr8.3 | CDS | 17410192 | 17410271 | 17410192 | ID=cds.MS.gene48347.t1;Parent=MS.gene48347.t1 |
| chr8.3 | exon | 17408586 | 17408739 | 17408586 | ID=MS.gene48347.t1.exon4;Parent=MS.gene48347.t1 |
| chr8.3 | CDS | 17408586 | 17408739 | 17408586 | ID=cds.MS.gene48347.t1;Parent=MS.gene48347.t1 |
| chr8.3 | exon | 17408403 | 17408481 | 17408403 | ID=MS.gene48347.t1.exon5;Parent=MS.gene48347.t1 |
| chr8.3 | CDS | 17408403 | 17408481 | 17408403 | ID=cds.MS.gene48347.t1;Parent=MS.gene48347.t1 |
| chr8.3 | exon | 17408185 | 17408272 | 17408185 | ID=MS.gene48347.t1.exon6;Parent=MS.gene48347.t1 |
| chr8.3 | CDS | 17408185 | 17408272 | 17408185 | ID=cds.MS.gene48347.t1;Parent=MS.gene48347.t1 |
| chr8.3 | exon | 17408036 | 17408082 | 17408036 | ID=MS.gene48347.t1.exon7;Parent=MS.gene48347.t1 |
| chr8.3 | CDS | 17408036 | 17408082 | 17408036 | ID=cds.MS.gene48347.t1;Parent=MS.gene48347.t1 |
| chr8.3 | exon | 17407717 | 17407935 | 17407717 | ID=MS.gene48347.t1.exon8;Parent=MS.gene48347.t1 |
| chr8.3 | CDS | 17407717 | 17407935 | 17407717 | ID=cds.MS.gene48347.t1;Parent=MS.gene48347.t1 |
| Gene Sequence |
| Protein sequence |
