Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene48740.t1 | XP_003605420.2 | 95.6 | 343 | 15 | 0 | 1 | 343 | 1 | 343 | 2.20E-184 | 654.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene48740.t1 | Q9SJZ2 | 72.2 | 320 | 89 | 0 | 12 | 331 | 7 | 326 | 2.1e-135 | 483.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene48740.t1 | G7JKV1 | 95.6 | 343 | 15 | 0 | 1 | 343 | 1 | 343 | 1.6e-184 | 654.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene014836 | MS.gene48740 | PPI |
MS.gene48740 | MS.gene57204 | PPI |
MS.gene09575 | MS.gene48740 | PPI |
MS.gene48740 | MS.gene072888 | PPI |
MS.gene48740 | MS.gene44482 | PPI |
MS.gene48740 | MS.gene27001 | PPI |
MS.gene48740 | MS.gene80170 | PPI |
MS.gene35931 | MS.gene48740 | PPI |
MS.gene20276 | MS.gene48740 | PPI |
MS.gene24236 | MS.gene48740 | PPI |
MS.gene67066 | MS.gene48740 | PPI |
MS.gene27263 | MS.gene48740 | PPI |
MS.gene48740 | MS.gene32635 | PPI |
MS.gene35795 | MS.gene48740 | PPI |
MS.gene029047 | MS.gene48740 | PPI |
MS.gene014924 | MS.gene48740 | PPI |
MS.gene48740 | MS.gene35853 | PPI |
MS.gene90718 | MS.gene48740 | PPI |
MS.gene48740 | MS.gene015231 | PPI |
MS.gene32715 | MS.gene48740 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene48740.t1 | MTR_4g031140 | 95.627 | 343 | 15 | 0 | 1 | 343 | 1 | 343 | 0.0 | 659 |
MS.gene48740.t1 | MTR_4g030890 | 82.972 | 323 | 55 | 0 | 21 | 343 | 93 | 415 | 0.0 | 573 |
MS.gene48740.t1 | MTR_3g094650 | 45.794 | 321 | 161 | 5 | 6 | 321 | 7 | 319 | 1.83e-97 | 291 |
MS.gene48740.t1 | MTR_3g072190 | 45.652 | 322 | 160 | 5 | 11 | 324 | 4 | 318 | 8.29e-97 | 290 |
MS.gene48740.t1 | MTR_8g076820 | 47.508 | 301 | 154 | 3 | 28 | 324 | 30 | 330 | 1.21e-96 | 290 |
MS.gene48740.t1 | MTR_3g466200 | 45.652 | 322 | 162 | 5 | 9 | 324 | 6 | 320 | 8.88e-95 | 285 |
MS.gene48740.t1 | MTR_2g029800 | 45.484 | 310 | 164 | 3 | 26 | 330 | 27 | 336 | 7.69e-94 | 283 |
MS.gene48740.t1 | MTR_5g074970 | 45.210 | 334 | 163 | 6 | 1 | 324 | 3 | 326 | 2.96e-93 | 281 |
MS.gene48740.t1 | MTR_5g021060 | 46.512 | 301 | 157 | 3 | 28 | 324 | 30 | 330 | 3.33e-93 | 281 |
MS.gene48740.t1 | MTR_2g029740 | 44.231 | 312 | 169 | 3 | 24 | 330 | 25 | 336 | 6.49e-92 | 278 |
MS.gene48740.t1 | MTR_2g040000 | 46.602 | 309 | 155 | 4 | 25 | 325 | 26 | 332 | 1.91e-91 | 276 |
MS.gene48740.t1 | MTR_5g074860 | 45.231 | 325 | 162 | 6 | 8 | 323 | 7 | 324 | 6.83e-91 | 275 |
MS.gene48740.t1 | MTR_5g083860 | 45.312 | 320 | 163 | 4 | 10 | 324 | 13 | 325 | 7.06e-91 | 275 |
MS.gene48740.t1 | MTR_2g028980 | 43.631 | 314 | 172 | 3 | 22 | 330 | 23 | 336 | 3.15e-90 | 274 |
MS.gene48740.t1 | MTR_2g029750 | 43.590 | 312 | 171 | 3 | 24 | 330 | 25 | 336 | 4.18e-90 | 274 |
MS.gene48740.t1 | MTR_1g101830 | 44.479 | 317 | 173 | 3 | 9 | 324 | 8 | 322 | 9.38e-90 | 272 |
MS.gene48740.t1 | MTR_7g093370 | 42.547 | 322 | 177 | 5 | 10 | 325 | 53 | 372 | 4.94e-89 | 272 |
MS.gene48740.t1 | MTR_7g026990 | 42.991 | 321 | 174 | 2 | 7 | 325 | 10 | 323 | 4.27e-88 | 268 |
MS.gene48740.t1 | MTR_5g074760 | 44.136 | 324 | 164 | 6 | 11 | 324 | 5 | 321 | 6.53e-88 | 267 |
MS.gene48740.t1 | MTR_5g074740 | 44.479 | 326 | 167 | 5 | 6 | 324 | 3 | 321 | 1.21e-87 | 266 |
MS.gene48740.t1 | MTR_3g466180 | 44.828 | 319 | 166 | 3 | 9 | 324 | 12 | 323 | 1.66e-87 | 266 |
MS.gene48740.t1 | MTR_4g122640 | 43.607 | 305 | 166 | 4 | 24 | 324 | 34 | 336 | 1.84e-87 | 266 |
MS.gene48740.t1 | MTR_2g029815 | 42.025 | 326 | 180 | 4 | 14 | 330 | 11 | 336 | 1.88e-87 | 267 |
MS.gene48740.t1 | MTR_4g029170 | 44.548 | 321 | 166 | 5 | 9 | 324 | 8 | 321 | 2.09e-87 | 266 |
MS.gene48740.t1 | MTR_3g094670 | 44.172 | 326 | 169 | 5 | 4 | 324 | 5 | 322 | 3.83e-87 | 265 |
MS.gene48740.t1 | MTR_3g094630 | 44.444 | 324 | 166 | 5 | 8 | 324 | 6 | 322 | 4.81e-87 | 265 |
MS.gene48740.t1 | MTR_1g022970 | 46.230 | 305 | 159 | 3 | 25 | 324 | 43 | 347 | 5.97e-87 | 266 |
MS.gene48740.t1 | MTR_4g125940 | 41.337 | 329 | 181 | 6 | 5 | 325 | 6 | 330 | 1.95e-86 | 264 |
MS.gene48740.t1 | MTR_4g083710 | 42.724 | 323 | 169 | 6 | 12 | 324 | 8 | 324 | 6.99e-86 | 262 |
MS.gene48740.t1 | MTR_2g084010 | 43.574 | 319 | 169 | 4 | 10 | 324 | 7 | 318 | 2.73e-85 | 260 |
MS.gene48740.t1 | MTR_2g029820 | 41.987 | 312 | 176 | 3 | 24 | 330 | 25 | 336 | 3.53e-85 | 261 |
MS.gene48740.t1 | MTR_2g084080 | 43.302 | 321 | 168 | 4 | 11 | 324 | 4 | 317 | 4.70e-85 | 259 |
MS.gene48740.t1 | MTR_5g074710 | 43.558 | 326 | 170 | 5 | 6 | 324 | 3 | 321 | 6.06e-85 | 259 |
MS.gene48740.t1 | MTR_5g049280 | 42.683 | 328 | 175 | 6 | 10 | 325 | 12 | 338 | 1.49e-84 | 259 |
MS.gene48740.t1 | MTR_2g029830 | 41.935 | 310 | 175 | 3 | 26 | 330 | 26 | 335 | 1.81e-84 | 259 |
MS.gene48740.t1 | MTR_4g029180 | 45.973 | 298 | 149 | 5 | 32 | 324 | 31 | 321 | 1.04e-83 | 256 |
MS.gene48740.t1 | MTR_5g017850 | 42.378 | 328 | 179 | 6 | 2 | 324 | 4 | 326 | 2.07e-83 | 256 |
MS.gene48740.t1 | MTR_2g029560 | 42.951 | 305 | 169 | 3 | 26 | 325 | 22 | 326 | 2.31e-83 | 256 |
MS.gene48740.t1 | MTR_2g029860 | 39.394 | 330 | 191 | 4 | 8 | 332 | 13 | 338 | 2.75e-83 | 256 |
MS.gene48740.t1 | MTR_2g084090 | 42.547 | 322 | 170 | 5 | 11 | 324 | 4 | 318 | 4.41e-83 | 254 |
MS.gene48740.t1 | MTR_2g084020 | 42.320 | 319 | 173 | 4 | 10 | 324 | 7 | 318 | 5.66e-83 | 254 |
MS.gene48740.t1 | MTR_2g084110 | 43.574 | 319 | 168 | 5 | 10 | 324 | 7 | 317 | 7.19e-83 | 254 |
MS.gene48740.t1 | MTR_1g054205 | 39.308 | 318 | 187 | 4 | 14 | 325 | 10 | 327 | 7.31e-83 | 254 |
MS.gene48740.t1 | MTR_4g029200 | 43.377 | 302 | 161 | 3 | 26 | 324 | 44 | 338 | 9.95e-83 | 254 |
MS.gene48740.t1 | MTR_5g014100 | 44.408 | 304 | 156 | 5 | 32 | 324 | 30 | 331 | 1.21e-81 | 251 |
MS.gene48740.t1 | MTR_2g029850 | 42.020 | 307 | 173 | 3 | 24 | 325 | 25 | 331 | 2.28e-81 | 251 |
MS.gene48740.t1 | MTR_2g029730 | 43.408 | 311 | 169 | 4 | 26 | 330 | 23 | 332 | 2.47e-81 | 251 |
MS.gene48740.t1 | MTR_2g084000 | 41.083 | 314 | 174 | 4 | 15 | 324 | 13 | 319 | 3.22e-81 | 250 |
MS.gene48740.t1 | MTR_4g029190 | 42.540 | 315 | 168 | 5 | 16 | 324 | 33 | 340 | 3.72e-81 | 251 |
MS.gene48740.t1 | MTR_7g072510 | 41.139 | 316 | 176 | 3 | 12 | 324 | 4 | 312 | 7.09e-81 | 249 |
MS.gene48740.t1 | MTR_5g017860 | 41.463 | 328 | 182 | 6 | 2 | 324 | 4 | 326 | 1.04e-80 | 249 |
MS.gene48740.t1 | MTR_4g074995 | 42.006 | 319 | 156 | 7 | 16 | 324 | 9 | 308 | 2.06e-80 | 248 |
MS.gene48740.t1 | MTR_2g029910 | 41.368 | 307 | 174 | 4 | 24 | 324 | 26 | 332 | 2.35e-80 | 249 |
MS.gene48740.t1 | MTR_3g467600 | 41.358 | 324 | 173 | 7 | 11 | 324 | 8 | 324 | 5.95e-79 | 244 |
MS.gene48740.t1 | MTR_1g025980 | 40.635 | 315 | 182 | 5 | 10 | 323 | 7 | 317 | 7.47e-79 | 244 |
MS.gene48740.t1 | MTR_4g125940 | 44.203 | 276 | 145 | 4 | 57 | 325 | 2 | 275 | 8.60e-79 | 242 |
MS.gene48740.t1 | MTR_3g072190 | 46.693 | 257 | 127 | 3 | 71 | 324 | 2 | 251 | 2.75e-78 | 240 |
MS.gene48740.t1 | MTR_4g074990 | 41.250 | 320 | 159 | 6 | 11 | 324 | 9 | 305 | 2.92e-78 | 242 |
MS.gene48740.t1 | MTR_7g072480 | 42.405 | 316 | 172 | 3 | 12 | 324 | 8 | 316 | 4.99e-78 | 242 |
MS.gene48740.t1 | MTR_8g075100 | 41.639 | 305 | 171 | 5 | 22 | 324 | 20 | 319 | 2.05e-77 | 240 |
MS.gene48740.t1 | MTR_4g133800 | 42.617 | 298 | 159 | 7 | 31 | 324 | 44 | 333 | 5.89e-77 | 239 |
MS.gene48740.t1 | MTR_4g046713 | 39.117 | 317 | 188 | 4 | 12 | 324 | 11 | 326 | 1.89e-76 | 238 |
MS.gene48740.t1 | MTR_0155s0040 | 39.812 | 319 | 174 | 6 | 14 | 324 | 7 | 315 | 5.29e-76 | 236 |
MS.gene48740.t1 | MTR_1g115900 | 39.752 | 322 | 180 | 5 | 10 | 325 | 9 | 322 | 6.93e-76 | 237 |
MS.gene48740.t1 | MTR_5g022870 | 40.379 | 317 | 183 | 5 | 10 | 324 | 4 | 316 | 1.01e-75 | 236 |
MS.gene48740.t1 | MTR_1g077000 | 39.198 | 324 | 178 | 6 | 10 | 324 | 14 | 327 | 1.84e-74 | 233 |
MS.gene48740.t1 | MTR_7g029030 | 39.498 | 319 | 184 | 5 | 10 | 324 | 7 | 320 | 6.86e-74 | 231 |
MS.gene48740.t1 | MTR_2g088770 | 39.077 | 325 | 190 | 7 | 5 | 324 | 4 | 325 | 1.11e-73 | 231 |
MS.gene48740.t1 | MTR_1g009750 | 37.654 | 324 | 189 | 6 | 13 | 324 | 6 | 328 | 7.15e-73 | 229 |
MS.gene48740.t1 | MTR_4g087965 | 39.589 | 341 | 168 | 9 | 10 | 320 | 10 | 342 | 1.06e-72 | 229 |
MS.gene48740.t1 | MTR_7g086820 | 39.159 | 309 | 168 | 6 | 26 | 326 | 18 | 314 | 1.07e-72 | 228 |
MS.gene48740.t1 | MTR_2g437770 | 41.611 | 298 | 161 | 6 | 32 | 325 | 54 | 342 | 5.43e-72 | 227 |
MS.gene48740.t1 | MTR_3g092990 | 37.117 | 326 | 201 | 3 | 4 | 325 | 2 | 327 | 8.40e-72 | 226 |
MS.gene48740.t1 | MTR_4g074980 | 38.558 | 319 | 161 | 6 | 12 | 324 | 5 | 294 | 5.63e-70 | 220 |
MS.gene48740.t1 | MTR_7g107520 | 38.235 | 306 | 182 | 5 | 22 | 324 | 19 | 320 | 5.63e-70 | 221 |
MS.gene48740.t1 | MTR_4g074980 | 43.922 | 255 | 129 | 4 | 12 | 258 | 5 | 253 | 1.72e-69 | 218 |
MS.gene48740.t1 | MTR_5g016010 | 37.255 | 306 | 186 | 4 | 24 | 323 | 23 | 328 | 2.83e-69 | 219 |
MS.gene48740.t1 | MTR_2g008710 | 38.199 | 322 | 187 | 6 | 10 | 324 | 9 | 325 | 1.26e-67 | 215 |
MS.gene48740.t1 | MTR_7g086870 | 36.570 | 309 | 171 | 6 | 26 | 325 | 20 | 312 | 2.60e-67 | 214 |
MS.gene48740.t1 | MTR_5g074860 | 38.154 | 325 | 146 | 6 | 8 | 323 | 7 | 285 | 3.42e-67 | 213 |
MS.gene48740.t1 | MTR_4g114210 | 38.125 | 320 | 184 | 7 | 13 | 324 | 7 | 320 | 6.15e-67 | 213 |
MS.gene48740.t1 | MTR_1g038680 | 42.193 | 301 | 167 | 6 | 31 | 324 | 32 | 332 | 1.04e-66 | 213 |
MS.gene48740.t1 | MTR_1g086320 | 38.941 | 321 | 189 | 5 | 11 | 324 | 13 | 333 | 6.07e-66 | 211 |
MS.gene48740.t1 | MTR_8g062780 | 36.250 | 320 | 197 | 4 | 11 | 324 | 6 | 324 | 9.18e-66 | 211 |
MS.gene48740.t1 | MTR_6g043280 | 39.130 | 299 | 169 | 7 | 32 | 326 | 45 | 334 | 2.11e-65 | 210 |
MS.gene48740.t1 | MTR_0286s0010 | 37.771 | 323 | 188 | 8 | 10 | 324 | 17 | 334 | 5.91e-65 | 209 |
MS.gene48740.t1 | MTR_6g008075 | 37.771 | 323 | 188 | 8 | 10 | 324 | 17 | 334 | 5.91e-65 | 209 |
MS.gene48740.t1 | MTR_2g029830 | 40.458 | 262 | 151 | 3 | 74 | 330 | 6 | 267 | 1.53e-64 | 206 |
MS.gene48740.t1 | MTR_6g043240 | 38.387 | 310 | 174 | 8 | 28 | 332 | 42 | 339 | 1.55e-64 | 208 |
MS.gene48740.t1 | MTR_1g086490 | 38.415 | 328 | 188 | 5 | 11 | 324 | 13 | 340 | 4.41e-64 | 207 |
MS.gene48740.t1 | MTR_1g090760 | 36.050 | 319 | 198 | 5 | 12 | 324 | 12 | 330 | 5.00e-63 | 204 |
MS.gene48740.t1 | MTR_6g027440 | 35.016 | 317 | 199 | 4 | 10 | 324 | 3 | 314 | 1.20e-62 | 202 |
MS.gene48740.t1 | MTR_6g043460 | 35.119 | 336 | 194 | 9 | 12 | 332 | 10 | 336 | 2.25e-62 | 202 |
MS.gene48740.t1 | MTR_5g033470 | 37.540 | 309 | 177 | 6 | 28 | 324 | 73 | 377 | 3.26e-62 | 203 |
MS.gene48740.t1 | MTR_4g132490 | 33.987 | 306 | 196 | 3 | 23 | 324 | 24 | 327 | 4.04e-62 | 201 |
MS.gene48740.t1 | MTR_3g092990 | 35.276 | 326 | 196 | 4 | 4 | 325 | 2 | 316 | 1.82e-61 | 199 |
MS.gene48740.t1 | MTR_1g009750 | 35.093 | 322 | 183 | 7 | 13 | 324 | 6 | 311 | 1.92e-61 | 199 |
MS.gene48740.t1 | MTR_4g031040 | 59.770 | 174 | 27 | 2 | 87 | 260 | 1 | 131 | 4.19e-61 | 192 |
MS.gene48740.t1 | MTR_2g067440 | 36.095 | 338 | 180 | 6 | 22 | 325 | 54 | 389 | 2.81e-60 | 198 |
MS.gene48740.t1 | MTR_4g127670 | 36.789 | 299 | 180 | 5 | 28 | 320 | 24 | 319 | 6.53e-59 | 193 |
MS.gene48740.t1 | MTR_4g095450 | 34.194 | 310 | 193 | 5 | 20 | 323 | 19 | 323 | 2.10e-58 | 191 |
MS.gene48740.t1 | MTR_1g066380 | 34.528 | 307 | 187 | 5 | 26 | 325 | 25 | 324 | 3.16e-58 | 191 |
MS.gene48740.t1 | MTR_2g077990 | 36.127 | 346 | 184 | 7 | 16 | 325 | 64 | 408 | 5.62e-58 | 193 |
MS.gene48740.t1 | MTR_2g099175 | 34.098 | 305 | 188 | 5 | 28 | 324 | 36 | 335 | 5.94e-58 | 191 |
MS.gene48740.t1 | MTR_1g066640 | 34.202 | 307 | 188 | 5 | 26 | 325 | 25 | 324 | 6.01e-58 | 190 |
MS.gene48740.t1 | MTR_2g078280 | 36.196 | 326 | 174 | 5 | 16 | 308 | 64 | 388 | 5.21e-57 | 190 |
MS.gene48740.t1 | MTR_1g066710 | 33.876 | 307 | 189 | 6 | 26 | 325 | 25 | 324 | 1.07e-56 | 187 |
MS.gene48740.t1 | MTR_1g066680 | 34.853 | 307 | 185 | 6 | 26 | 325 | 25 | 323 | 3.20e-56 | 186 |
MS.gene48740.t1 | MTR_2g078610 | 35.549 | 346 | 186 | 7 | 16 | 325 | 64 | 408 | 4.24e-56 | 188 |
MS.gene48740.t1 | MTR_4g132110 | 32.326 | 331 | 202 | 7 | 11 | 326 | 7 | 330 | 6.27e-55 | 183 |
MS.gene48740.t1 | MTR_2g008160 | 36.246 | 309 | 184 | 8 | 24 | 324 | 20 | 323 | 3.52e-53 | 178 |
MS.gene48740.t1 | MTR_4g132110 | 31.845 | 336 | 202 | 8 | 11 | 326 | 7 | 335 | 1.37e-52 | 177 |
MS.gene48740.t1 | MTR_2g008730 | 34.472 | 322 | 175 | 7 | 10 | 324 | 9 | 301 | 1.40e-50 | 171 |
MS.gene48740.t1 | MTR_3g105790 | 34.891 | 321 | 196 | 9 | 12 | 324 | 7 | 322 | 5.86e-50 | 169 |
MS.gene48740.t1 | MTR_2g067450 | 34.921 | 315 | 187 | 7 | 22 | 325 | 5 | 312 | 1.09e-48 | 166 |
MS.gene48740.t1 | MTR_0147s0010 | 31.348 | 319 | 182 | 7 | 28 | 323 | 77 | 381 | 1.04e-44 | 157 |
MS.gene48740.t1 | MTR_1g066380 | 33.716 | 261 | 159 | 5 | 72 | 325 | 3 | 256 | 1.28e-44 | 154 |
MS.gene48740.t1 | MTR_3g072210 | 43.005 | 193 | 94 | 5 | 139 | 324 | 55 | 238 | 2.66e-42 | 147 |
MS.gene48740.t1 | MTR_5g074700 | 40.175 | 229 | 113 | 6 | 101 | 324 | 5 | 214 | 6.59e-42 | 145 |
MS.gene48740.t1 | MTR_2g008160 | 32.039 | 309 | 162 | 8 | 24 | 324 | 20 | 288 | 4.47e-40 | 143 |
MS.gene48740.t1 | MTR_2g008160 | 41.379 | 174 | 98 | 3 | 24 | 197 | 20 | 189 | 2.14e-39 | 138 |
MS.gene48740.t1 | MTR_3g072260 | 50.388 | 129 | 60 | 1 | 11 | 135 | 5 | 133 | 1.07e-38 | 134 |
MS.gene48740.t1 | MTR_7g072490 | 35.897 | 234 | 90 | 4 | 74 | 307 | 2 | 175 | 1.40e-35 | 129 |
MS.gene48740.t1 | MTR_2g029880 | 37.500 | 192 | 103 | 4 | 140 | 325 | 9 | 189 | 1.44e-34 | 126 |
MS.gene48740.t1 | MTR_3g105790 | 35.345 | 232 | 143 | 6 | 99 | 324 | 16 | 246 | 4.65e-32 | 120 |
MS.gene48740.t1 | MTR_2g077980 | 32.509 | 283 | 137 | 12 | 90 | 325 | 11 | 286 | 7.17e-25 | 102 |
MS.gene48740.t1 | MTR_7g086790 | 34.031 | 191 | 105 | 5 | 75 | 265 | 17 | 186 | 2.55e-24 | 98.6 |
MS.gene48740.t1 | MTR_2g078560 | 30.631 | 222 | 120 | 4 | 133 | 320 | 95 | 316 | 1.43e-21 | 94.0 |
MS.gene48740.t1 | MTR_5g058120 | 35.625 | 160 | 89 | 4 | 164 | 320 | 7 | 155 | 1.54e-21 | 92.4 |
MS.gene48740.t1 | MTR_6g048160 | 54.167 | 72 | 29 | 2 | 66 | 137 | 21 | 88 | 1.33e-18 | 80.1 |
MS.gene48740.t1 | MTR_3g462850 | 36.364 | 143 | 81 | 5 | 192 | 325 | 9 | 150 | 2.20e-18 | 81.3 |
MS.gene48740.t1 | MTR_4g114220 | 47.619 | 84 | 34 | 2 | 54 | 137 | 29 | 102 | 5.70e-18 | 79.7 |
MS.gene48740.t1 | MTR_1g089005 | 33.083 | 133 | 82 | 2 | 14 | 140 | 1 | 132 | 5.58e-17 | 77.4 |
MS.gene48740.t1 | MTR_7g086810 | 33.333 | 120 | 54 | 2 | 26 | 145 | 4 | 97 | 1.08e-16 | 78.6 |
MS.gene48740.t1 | MTR_1g098320 | 41.860 | 86 | 48 | 1 | 249 | 332 | 47 | 132 | 7.65e-14 | 68.6 |
MS.gene48740.t1 | MTR_3g107060 | 30.488 | 164 | 90 | 6 | 43 | 198 | 91 | 238 | 9.84e-13 | 68.6 |
MS.gene48740.t1 | MTR_7g086785 | 29.496 | 139 | 92 | 2 | 74 | 212 | 4 | 136 | 1.35e-12 | 64.7 |
MS.gene48740.t1 | MTR_4g012865 | 39.726 | 73 | 35 | 1 | 28 | 91 | 77 | 149 | 1.42e-12 | 65.1 |
MS.gene48740.t1 | MTR_2g029930 | 32.743 | 113 | 47 | 3 | 14 | 111 | 1 | 99 | 3.34e-12 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene48740.t1 | AT2G22420 | 72.188 | 320 | 89 | 0 | 12 | 331 | 7 | 326 | 1.68e-178 | 498 |
MS.gene48740.t1 | AT2G18150 | 43.902 | 328 | 171 | 4 | 10 | 324 | 9 | 336 | 3.86e-96 | 289 |
MS.gene48740.t1 | AT5G19890 | 48.684 | 304 | 147 | 4 | 26 | 324 | 28 | 327 | 1.59e-95 | 287 |
MS.gene48740.t1 | AT4G36430 | 46.358 | 302 | 158 | 3 | 28 | 325 | 30 | 331 | 3.48e-95 | 286 |
MS.gene48740.t1 | AT5G06730 | 41.127 | 355 | 193 | 5 | 1 | 343 | 3 | 353 | 7.68e-95 | 286 |
MS.gene48740.t1 | AT5G06720 | 44.272 | 323 | 168 | 4 | 15 | 325 | 12 | 334 | 2.06e-94 | 284 |
MS.gene48740.t1 | AT5G66390 | 45.183 | 301 | 161 | 3 | 28 | 324 | 33 | 333 | 5.30e-93 | 281 |
MS.gene48740.t1 | AT2G18140 | 46.689 | 302 | 157 | 3 | 27 | 324 | 34 | 335 | 1.45e-91 | 277 |
MS.gene48740.t1 | AT4G16270 | 47.138 | 297 | 153 | 4 | 31 | 324 | 53 | 348 | 3.27e-91 | 276 |
MS.gene48740.t1 | AT2G38390 | 43.789 | 322 | 175 | 4 | 24 | 339 | 27 | 348 | 3.60e-91 | 276 |
MS.gene48740.t1 | AT2G38380 | 43.478 | 322 | 176 | 4 | 24 | 339 | 27 | 348 | 3.62e-89 | 271 |
MS.gene48740.t1 | AT4G08770 | 44.089 | 313 | 168 | 4 | 21 | 326 | 17 | 329 | 5.67e-89 | 271 |
MS.gene48740.t1 | AT4G08780 | 43.450 | 313 | 170 | 4 | 21 | 326 | 17 | 329 | 5.98e-89 | 271 |
MS.gene48740.t1 | AT3G50990 | 43.234 | 303 | 168 | 3 | 26 | 324 | 39 | 341 | 9.95e-88 | 268 |
MS.gene48740.t1 | AT5G05340 | 43.831 | 308 | 159 | 4 | 23 | 324 | 25 | 324 | 2.06e-87 | 266 |
MS.gene48740.t1 | AT3G32980 | 44.516 | 310 | 165 | 4 | 23 | 325 | 26 | 335 | 2.17e-87 | 267 |
MS.gene48740.t1 | AT1G44970 | 44.737 | 304 | 163 | 3 | 26 | 324 | 43 | 346 | 3.23e-87 | 266 |
MS.gene48740.t1 | AT5G19880 | 44.548 | 321 | 170 | 5 | 12 | 324 | 9 | 329 | 6.41e-87 | 265 |
MS.gene48740.t1 | AT3G49110 | 43.689 | 309 | 167 | 4 | 24 | 325 | 29 | 337 | 9.78e-86 | 263 |
MS.gene48740.t1 | AT5G58400 | 44.062 | 320 | 166 | 5 | 11 | 324 | 13 | 325 | 2.12e-85 | 261 |
MS.gene48740.t1 | AT1G68850 | 40.774 | 336 | 175 | 7 | 11 | 325 | 4 | 336 | 2.39e-84 | 259 |
MS.gene48740.t1 | AT5G51890 | 42.056 | 321 | 182 | 3 | 6 | 324 | 4 | 322 | 4.77e-84 | 257 |
MS.gene48740.t1 | AT3G49120 | 42.258 | 310 | 172 | 4 | 23 | 325 | 27 | 336 | 6.13e-84 | 258 |
MS.gene48740.t1 | AT1G14540 | 40.752 | 319 | 179 | 4 | 10 | 324 | 3 | 315 | 9.44e-82 | 251 |
MS.gene48740.t1 | AT5G58390 | 42.947 | 319 | 169 | 5 | 12 | 324 | 5 | 316 | 5.39e-81 | 249 |
MS.gene48740.t1 | AT5G42180 | 41.139 | 316 | 182 | 4 | 9 | 323 | 4 | 316 | 9.36e-81 | 249 |
MS.gene48740.t1 | AT2G35380 | 45.098 | 306 | 159 | 5 | 28 | 324 | 30 | 335 | 4.64e-80 | 248 |
MS.gene48740.t1 | AT1G49570 | 43.377 | 302 | 165 | 4 | 25 | 320 | 45 | 346 | 6.08e-80 | 248 |
MS.gene48740.t1 | AT1G14550 | 41.250 | 320 | 174 | 6 | 13 | 324 | 8 | 321 | 5.33e-79 | 244 |
MS.gene48740.t1 | AT5G17820 | 39.117 | 317 | 180 | 6 | 11 | 324 | 7 | 313 | 8.64e-78 | 241 |
MS.gene48740.t1 | AT5G17820 | 38.769 | 325 | 186 | 6 | 3 | 324 | 52 | 366 | 4.61e-77 | 241 |
MS.gene48740.t1 | AT4G33420 | 42.712 | 295 | 157 | 5 | 32 | 324 | 41 | 325 | 7.03e-75 | 234 |
MS.gene48740.t1 | AT4G33420 | 42.712 | 295 | 157 | 5 | 32 | 324 | 88 | 372 | 2.67e-74 | 234 |
MS.gene48740.t1 | AT3G03670 | 37.538 | 325 | 191 | 4 | 7 | 324 | 2 | 321 | 4.70e-74 | 232 |
MS.gene48740.t1 | AT3G49960 | 38.509 | 322 | 191 | 5 | 10 | 324 | 8 | 329 | 3.15e-73 | 230 |
MS.gene48740.t1 | AT1G71695 | 39.623 | 318 | 179 | 6 | 28 | 339 | 44 | 354 | 2.36e-72 | 229 |
MS.gene48740.t1 | AT5G64120 | 38.650 | 326 | 180 | 8 | 13 | 324 | 9 | 328 | 3.43e-72 | 227 |
MS.gene48740.t1 | AT5G39580 | 39.117 | 317 | 183 | 7 | 12 | 324 | 9 | 319 | 6.72e-72 | 226 |
MS.gene48740.t1 | AT3G01190 | 42.547 | 322 | 166 | 10 | 10 | 324 | 12 | 321 | 3.48e-71 | 224 |
MS.gene48740.t1 | AT4G11290 | 38.037 | 326 | 194 | 7 | 6 | 324 | 2 | 326 | 5.89e-71 | 224 |
MS.gene48740.t1 | AT2G41480 | 38.769 | 325 | 186 | 6 | 8 | 324 | 9 | 328 | 7.43e-71 | 224 |
MS.gene48740.t1 | AT1G05260 | 38.730 | 315 | 186 | 6 | 16 | 325 | 14 | 326 | 1.04e-70 | 223 |
MS.gene48740.t1 | AT4G37530 | 38.710 | 310 | 184 | 4 | 21 | 324 | 20 | 329 | 2.62e-70 | 223 |
MS.gene48740.t1 | AT4G37520 | 37.705 | 305 | 184 | 4 | 26 | 324 | 25 | 329 | 5.00e-70 | 222 |
MS.gene48740.t1 | AT5G15180 | 39.877 | 326 | 181 | 8 | 8 | 324 | 10 | 329 | 9.96e-70 | 221 |
MS.gene48740.t1 | AT5G67400 | 37.785 | 307 | 185 | 4 | 24 | 324 | 23 | 329 | 8.41e-69 | 218 |
MS.gene48740.t1 | AT2G34060 | 38.348 | 339 | 175 | 11 | 12 | 322 | 12 | 344 | 1.61e-68 | 218 |
MS.gene48740.t1 | AT4G37520 | 37.049 | 305 | 183 | 5 | 26 | 324 | 25 | 326 | 3.53e-67 | 214 |
MS.gene48740.t1 | AT1G05240 | 39.799 | 299 | 171 | 6 | 32 | 324 | 30 | 325 | 1.26e-66 | 213 |
MS.gene48740.t1 | AT1G05250 | 39.799 | 299 | 171 | 6 | 32 | 324 | 30 | 325 | 1.26e-66 | 213 |
MS.gene48740.t1 | AT1G77100 | 38.110 | 328 | 176 | 9 | 10 | 324 | 6 | 319 | 1.94e-66 | 212 |
MS.gene48740.t1 | AT3G21770 | 37.778 | 315 | 187 | 6 | 17 | 325 | 18 | 329 | 3.35e-66 | 212 |
MS.gene48740.t1 | AT4G30170 | 37.097 | 310 | 177 | 6 | 25 | 324 | 24 | 325 | 3.36e-66 | 212 |
MS.gene48740.t1 | AT5G14130 | 34.043 | 329 | 191 | 5 | 10 | 324 | 14 | 330 | 3.92e-65 | 209 |
MS.gene48740.t1 | AT5G14130 | 34.043 | 329 | 191 | 5 | 10 | 324 | 55 | 371 | 1.06e-64 | 209 |
MS.gene48740.t1 | AT1G30870 | 40.532 | 301 | 165 | 7 | 32 | 326 | 55 | 347 | 1.07e-64 | 209 |
MS.gene48740.t1 | AT3G28200 | 37.624 | 303 | 176 | 5 | 28 | 324 | 21 | 316 | 4.84e-64 | 206 |
MS.gene48740.t1 | AT2G18980 | 35.276 | 326 | 184 | 6 | 12 | 324 | 12 | 323 | 1.61e-63 | 205 |
MS.gene48740.t1 | AT4G17690 | 38.487 | 304 | 175 | 6 | 27 | 324 | 25 | 322 | 1.20e-62 | 202 |
MS.gene48740.t1 | AT5G47000 | 37.538 | 325 | 189 | 6 | 9 | 324 | 11 | 330 | 1.32e-62 | 202 |
MS.gene48740.t1 | AT4G26010 | 38.284 | 303 | 170 | 7 | 26 | 324 | 20 | 309 | 1.74e-62 | 202 |
MS.gene48740.t1 | AT4G26010 | 38.284 | 303 | 170 | 7 | 26 | 324 | 48 | 337 | 2.36e-62 | 202 |
MS.gene48740.t1 | AT4G25980 | 37.097 | 310 | 183 | 6 | 23 | 324 | 21 | 326 | 3.62e-62 | 201 |
MS.gene48740.t1 | AT4G37530 | 40.769 | 260 | 150 | 3 | 21 | 276 | 20 | 279 | 6.13e-62 | 199 |
MS.gene48740.t1 | AT2G39040 | 37.785 | 307 | 179 | 8 | 28 | 324 | 46 | 350 | 1.14e-61 | 201 |
MS.gene48740.t1 | AT5G40150 | 37.248 | 298 | 177 | 4 | 32 | 324 | 36 | 328 | 1.61e-61 | 200 |
MS.gene48740.t1 | AT1G24110 | 33.754 | 317 | 202 | 5 | 14 | 324 | 8 | 322 | 1.72e-61 | 199 |
MS.gene48740.t1 | AT5G64100 | 35.030 | 334 | 188 | 9 | 10 | 324 | 8 | 331 | 1.63e-60 | 197 |
MS.gene48740.t1 | AT5G64110 | 37.349 | 332 | 190 | 10 | 4 | 324 | 6 | 330 | 2.99e-60 | 196 |
MS.gene48740.t1 | AT4G21960 | 34.505 | 313 | 185 | 7 | 23 | 324 | 24 | 327 | 7.53e-59 | 193 |
MS.gene48740.t1 | AT2G24800 | 37.255 | 306 | 180 | 7 | 26 | 324 | 29 | 329 | 7.48e-58 | 190 |
MS.gene48740.t1 | AT4G33870 | 33.333 | 330 | 175 | 4 | 32 | 320 | 72 | 397 | 1.17e-57 | 192 |
MS.gene48740.t1 | AT5G22410 | 37.662 | 308 | 177 | 7 | 28 | 327 | 28 | 328 | 1.20e-57 | 190 |
MS.gene48740.t1 | AT3G17070 | 33.333 | 336 | 208 | 5 | 2 | 324 | 7 | 339 | 6.17e-57 | 188 |
MS.gene48740.t1 | AT1G34510 | 35.385 | 325 | 177 | 10 | 10 | 324 | 8 | 309 | 1.31e-56 | 186 |
MS.gene48740.t1 | AT2G35380 | 43.320 | 247 | 131 | 5 | 87 | 324 | 1 | 247 | 8.67e-56 | 182 |
MS.gene48740.t1 | AT2G37130 | 33.121 | 314 | 195 | 7 | 19 | 324 | 21 | 327 | 1.88e-55 | 184 |
MS.gene48740.t1 | AT4G31760 | 33.537 | 328 | 203 | 8 | 5 | 324 | 6 | 326 | 1.96e-55 | 184 |
MS.gene48740.t1 | AT2G37130 | 33.887 | 301 | 184 | 7 | 32 | 324 | 3 | 296 | 7.01e-55 | 181 |
MS.gene48740.t1 | AT2G43480 | 35.314 | 303 | 180 | 6 | 32 | 324 | 39 | 335 | 6.04e-54 | 180 |
MS.gene48740.t1 | AT5G24070 | 33.553 | 304 | 186 | 6 | 32 | 325 | 39 | 336 | 7.62e-52 | 175 |
MS.gene48740.t1 | AT5G39580 | 40.206 | 194 | 111 | 3 | 12 | 205 | 9 | 197 | 7.80e-44 | 151 |
MS.gene48740.t1 | AT3G17070 | 33.582 | 268 | 166 | 5 | 65 | 324 | 13 | 276 | 2.86e-42 | 148 |
MS.gene48740.t1 | AT4G25980 | 42.775 | 173 | 95 | 3 | 23 | 195 | 66 | 234 | 9.53e-40 | 142 |
MS.gene48740.t1 | AT2G24800 | 41.026 | 195 | 103 | 6 | 26 | 213 | 29 | 218 | 8.05e-35 | 127 |
MS.gene48740.t1 | AT1G77490 | 26.136 | 264 | 148 | 8 | 62 | 308 | 106 | 339 | 8.63e-18 | 84.3 |
MS.gene48740.t1 | AT1G77490 | 30.412 | 194 | 110 | 5 | 121 | 308 | 165 | 339 | 1.40e-17 | 83.6 |
MS.gene48740.t1 | AT4G08390 | 25.651 | 269 | 149 | 9 | 62 | 311 | 127 | 363 | 9.16e-15 | 75.1 |
MS.gene48740.t1 | AT4G08390 | 25.651 | 269 | 149 | 9 | 62 | 311 | 127 | 363 | 9.16e-15 | 75.1 |
MS.gene48740.t1 | AT4G08390 | 25.651 | 269 | 149 | 9 | 62 | 311 | 127 | 363 | 9.16e-15 | 75.1 |
MS.gene48740.t1 | AT4G08390 | 25.651 | 269 | 149 | 9 | 62 | 311 | 126 | 362 | 9.45e-15 | 75.1 |
MS.gene48740.t1 | AT3G42570 | 35.789 | 95 | 60 | 1 | 100 | 193 | 53 | 147 | 1.77e-14 | 70.5 |
Find 60 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCAATTGATCCTGTATTT+AGG | 0.134391 | 4.4:+72726639 | MS.gene48740:CDS |
TGTTGAAGGAATGTTGAAAT+TGG | 0.241814 | 4.4:+72726874 | MS.gene48740:CDS |
CCTAATCTCACTTCCCAATT+AGG | 0.252124 | 4.4:-72726401 | None:intergenic |
CAACCAAGTCCTTGAAATAT+TGG | 0.258540 | 4.4:-72726745 | None:intergenic |
TGCAATTGATCCTGTATTTA+GGG | 0.261821 | 4.4:+72726640 | MS.gene48740:CDS |
TACAGACAGGAGGACCTAAT+TGG | 0.284229 | 4.4:+72726387 | MS.gene48740:intron |
AACTATGCTTGGAGAGAAAT+TGG | 0.290246 | 4.4:+72725603 | MS.gene48740:CDS |
ATAACAGAGGCAACACTTCT+TGG | 0.295424 | 4.4:-72725214 | None:intergenic |
GGAAGTGAGATTAGGAAGAT+TGG | 0.383464 | 4.4:+72726409 | MS.gene48740:CDS |
AGAGCGGTAGCATTAGTTCT+TGG | 0.384073 | 4.4:-72726479 | None:intergenic |
CTCACAAACCCCTTTGTTTG+AGG | 0.385011 | 4.4:-72726812 | None:intergenic |
TGAAGTTGTTGATGAGGTTA+AGG | 0.386837 | 4.4:+72725657 | MS.gene48740:CDS |
CTGATAAGCCTGGTGAAGTT+AGG | 0.388834 | 4.4:+72726909 | MS.gene48740:CDS |
TTCACTTTCCCTCAAACAAA+GGG | 0.399642 | 4.4:+72726803 | MS.gene48740:CDS |
TTGTGCTGATATTATAATCA+TGG | 0.400880 | 4.4:+72725714 | MS.gene48740:CDS |
GTTGAAGGAATGTTGAAATT+GGG | 0.420650 | 4.4:+72726875 | MS.gene48740:CDS |
CTAAATACAGGATCAATTGC+AGG | 0.420661 | 4.4:-72726638 | None:intergenic |
TCAAGTTCTTCCCTAAATAC+AGG | 0.427013 | 4.4:-72726650 | None:intergenic |
AAGGACTTGGTTGGTGGAAG+AGG | 0.432566 | 4.4:+72726755 | MS.gene48740:CDS |
TTTCGATAACCAATATTTCA+AGG | 0.438590 | 4.4:+72726736 | MS.gene48740:CDS |
CTAACAATTGTTTCAGCTTG+TGG | 0.438866 | 4.4:-72725160 | None:intergenic |
TCACAAACCCCTTTGTTTGA+GGG | 0.448085 | 4.4:-72726811 | None:intergenic |
CAATTCTTCCTAACTTCACC+AGG | 0.452043 | 4.4:-72726917 | None:intergenic |
TTCTAGAGATGCTGTAGCAC+TGG | 0.460212 | 4.4:+72725738 | MS.gene48740:CDS |
CCTAATTGGGAAGTGAGATT+AGG | 0.463783 | 4.4:+72726401 | MS.gene48740:CDS |
TAACCAATATTTCAAGGACT+TGG | 0.464692 | 4.4:+72726742 | MS.gene48740:CDS |
AGGGTCAGGCTTTCCGCTAC+CGG | 0.465665 | 4.4:-72726618 | None:intergenic |
ACAGACAGGAGGACCTAATT+GGG | 0.473432 | 4.4:+72726388 | MS.gene48740:intron |
AAAGACCTTGTAGCACTCTC+AGG | 0.474322 | 4.4:+72726536 | MS.gene48740:CDS |
GTAGCATTAGTTCTTGGACT+TGG | 0.476804 | 4.4:-72726473 | None:intergenic |
TTTCACTTTCCCTCAAACAA+AGG | 0.488533 | 4.4:+72726802 | MS.gene48740:CDS |
ACAGGATCAATTGCAGGGTC+AGG | 0.489409 | 4.4:-72726632 | None:intergenic |
TCTTTATCTTGTCTTCAGAC+AGG | 0.490611 | 4.4:-72726970 | None:intergenic |
CAATATTTCAAGGACTTGGT+TGG | 0.502030 | 4.4:+72726746 | MS.gene48740:CDS |
AATTTCTCTCCAAGCATAGT+TGG | 0.513582 | 4.4:-72725601 | None:intergenic |
ATCATTTGAAGTTGTTGATG+AGG | 0.515377 | 4.4:+72725651 | MS.gene48740:CDS |
GAATTTGTGAAGGGGTGTGA+TGG | 0.528293 | 4.4:+72725556 | MS.gene48740:intron |
GATGTTGATCAAAATAAGAC+AGG | 0.536838 | 4.4:+72726689 | MS.gene48740:CDS |
ACATCAGCGGATCTTCGACC+AGG | 0.537772 | 4.4:+72725118 | MS.gene48740:CDS |
GATGATACACCAACTATGCT+TGG | 0.538107 | 4.4:+72725592 | MS.gene48740:CDS |
TATTTCAAGGACTTGGTTGG+TGG | 0.538804 | 4.4:+72726749 | MS.gene48740:CDS |
AAATCACAGGAGTTGCATCA+AGG | 0.548807 | 4.4:-72726715 | None:intergenic |
GCTGTAGAGAAAGCATGTCC+TGG | 0.564015 | 4.4:+72725682 | MS.gene48740:CDS |
TTTCGGCTATACAATCAATC+CGG | 0.568350 | 4.4:+72726599 | MS.gene48740:CDS |
GACTTGCAGTCTGATAAGCC+TGG | 0.576693 | 4.4:+72726899 | MS.gene48740:CDS |
TCTTCAGACAGGATATGAGC+AGG | 0.583752 | 4.4:-72726959 | None:intergenic |
TCAGCACAAGAAACAACTCC+AGG | 0.586737 | 4.4:-72725700 | None:intergenic |
CTCTCAGGATCACACTCTAT+CGG | 0.590516 | 4.4:+72726551 | MS.gene48740:CDS |
TATTGGTTATCGAAAATCAC+AGG | 0.593232 | 4.4:-72726728 | None:intergenic |
CTATACAATCAATCCGGTAG+CGG | 0.596485 | 4.4:+72726605 | MS.gene48740:CDS |
TCACTTTCATTACAGACAGG+AGG | 0.612156 | 4.4:+72726377 | MS.gene48740:intron |
TTGGAAGAGATTAATGAGAG+CGG | 0.614681 | 4.4:-72726495 | None:intergenic |
GTGATCCTGAGAGTGCTACA+AGG | 0.617824 | 4.4:-72726541 | None:intergenic |
AAAGTGTTTGATCAGAGTTG+AGG | 0.630782 | 4.4:-72726781 | None:intergenic |
CATCAGCGGATCTTCGACCA+GGG | 0.636659 | 4.4:+72725119 | MS.gene48740:CDS |
TAAATACAGGATCAATTGCA+GGG | 0.640618 | 4.4:-72726637 | None:intergenic |
TCACTTTCCCTCAAACAAAG+GGG | 0.650198 | 4.4:+72726804 | MS.gene48740:CDS |
CATAATCATAGTAACATCAG+CGG | 0.678749 | 4.4:+72725105 | MS.gene48740:CDS |
AAATTGAAATCTCATAACAG+AGG | 0.697630 | 4.4:-72725227 | None:intergenic |
CTACAAGGTCTTTGACACTG+AGG | 0.723316 | 4.4:-72726526 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTAAATAAAATATTTAT+AGG | + | chr4.4:72725474-72725493 | MS.gene48740:intron | 0.0% |
!!! | TGATAAAATAAATCTATTTT+AGG | + | chr4.4:72725994-72726013 | MS.gene48740:intron | 10.0% |
!!! | CAATTGATTTATTAATTTGA+CGG | + | chr4.4:72725955-72725974 | MS.gene48740:intron | 15.0% |
!!! | TTGAAAAGATAGAATTTTGA+TGG | - | chr4.4:72725297-72725316 | None:intergenic | 20.0% |
! | AAATTGAAATCTCATAACAG+AGG | - | chr4.4:72725230-72725249 | None:intergenic | 25.0% |
! | CGATCTCAATCATTAATTTA+AGG | - | chr4.4:72726298-72726317 | None:intergenic | 25.0% |
! | GAGTACTAATTAGATCAATA+TGG | - | chr4.4:72726073-72726092 | None:intergenic | 25.0% |
! | TTTCGATAACCAATATTTCA+AGG | + | chr4.4:72726736-72726755 | MS.gene48740:CDS | 25.0% |
!! | CTCAATCATTAATTTAAGGT+CGG | - | chr4.4:72726294-72726313 | None:intergenic | 25.0% |
!! | TTGTGCTGATATTATAATCA+TGG | + | chr4.4:72725714-72725733 | MS.gene48740:CDS | 25.0% |
!!! | GTTGTTTTTCAATCATGTTT+CGG | + | chr4.4:72726582-72726601 | MS.gene48740:CDS | 25.0% |
!!! | TATGGTAAACATTTTAGCAT+TGG | - | chr4.4:72726055-72726074 | None:intergenic | 25.0% |
!!! | TTTTTCAAAGCATTTGTTGA+AGG | + | chr4.4:72726860-72726879 | MS.gene48740:CDS | 25.0% |
ACATGGACAATATTGGAAAA+GGG | - | chr4.4:72726137-72726156 | None:intergenic | 30.0% | |
ACTAGACACATTATCGAAAA+TGG | + | chr4.4:72726159-72726178 | MS.gene48740:intron | 30.0% | |
ATGAGTTGTTGAATTTGTGA+AGG | + | chr4.4:72725546-72725565 | MS.gene48740:intron | 30.0% | |
CATAATCATAGTAACATCAG+CGG | + | chr4.4:72725105-72725124 | MS.gene48740:CDS | 30.0% | |
CTAGTTTACATGGACAATAT+TGG | - | chr4.4:72726144-72726163 | None:intergenic | 30.0% | |
GATGTTGATCAAAATAAGAC+AGG | + | chr4.4:72726689-72726708 | MS.gene48740:CDS | 30.0% | |
GTTGAAGGAATGTTGAAATT+GGG | + | chr4.4:72726875-72726894 | MS.gene48740:CDS | 30.0% | |
TAAATACAGGATCAATTGCA+GGG | - | chr4.4:72726640-72726659 | None:intergenic | 30.0% | |
TAACCAATATTTCAAGGACT+TGG | + | chr4.4:72726742-72726761 | MS.gene48740:CDS | 30.0% | |
TACATGGACAATATTGGAAA+AGG | - | chr4.4:72726138-72726157 | None:intergenic | 30.0% | |
TGAGTTGTTGAATTTGTGAA+GGG | + | chr4.4:72725547-72725566 | MS.gene48740:intron | 30.0% | |
TGCAATTGATCCTGTATTTA+GGG | + | chr4.4:72726640-72726659 | MS.gene48740:CDS | 30.0% | |
TGTTGAAGGAATGTTGAAAT+TGG | + | chr4.4:72726874-72726893 | MS.gene48740:CDS | 30.0% | |
TTGAATATGCAGTCTCAATA+AGG | - | chr4.4:72726340-72726359 | None:intergenic | 30.0% | |
! | ATCATTAATTTAAGGTCGGA+TGG | - | chr4.4:72726290-72726309 | None:intergenic | 30.0% |
! | ATCATTTGAAGTTGTTGATG+AGG | + | chr4.4:72725651-72725670 | MS.gene48740:CDS | 30.0% |
! | GATAATGTGTCTAGTTTACA+TGG | - | chr4.4:72726154-72726173 | None:intergenic | 30.0% |
! | TAAAGGACGAGGTTTTTAAA+TGG | + | chr4.4:72726233-72726252 | MS.gene48740:intron | 30.0% |
! | TATTGGTTATCGAAAATCAC+AGG | - | chr4.4:72726731-72726750 | None:intergenic | 30.0% |
! | TGACACTGAGGTTATATTTT+TGG | - | chr4.4:72726517-72726536 | None:intergenic | 30.0% |
! | TTTTCACTTTCATTACAGAC+AGG | + | chr4.4:72726374-72726393 | MS.gene48740:intron | 30.0% |
!!! | TTATTTTGATCAACATCTCG+TGG | - | chr4.4:72726686-72726705 | None:intergenic | 30.0% |
AACTATGCTTGGAGAGAAAT+TGG | + | chr4.4:72725603-72725622 | MS.gene48740:CDS | 35.0% | |
AATTTCTCTCCAAGCATAGT+TGG | - | chr4.4:72725604-72725623 | None:intergenic | 35.0% | |
CAACCAAGTCCTTGAAATAT+TGG | - | chr4.4:72726748-72726767 | None:intergenic | 35.0% | |
CAATAAGGATCTAGATGACA+CGG | - | chr4.4:72726325-72726344 | None:intergenic | 35.0% | |
CTAAATACAGGATCAATTGC+AGG | - | chr4.4:72726641-72726660 | None:intergenic | 35.0% | |
CTAACAATTGTTTCAGCTTG+TGG | - | chr4.4:72725163-72725182 | None:intergenic | 35.0% | |
CTGCAATTGATCCTGTATTT+AGG | + | chr4.4:72726639-72726658 | MS.gene48740:CDS | 35.0% | |
GAGTTGTTGAATTTGTGAAG+GGG | + | chr4.4:72725548-72725567 | MS.gene48740:intron | 35.0% | |
TCAAGTTCTTCCCTAAATAC+AGG | - | chr4.4:72726653-72726672 | None:intergenic | 35.0% | |
TCCTTTAATATGAGATCAGG+CGG | - | chr4.4:72726220-72726239 | None:intergenic | 35.0% | |
TCGTCCTTTAATATGAGATC+AGG | - | chr4.4:72726223-72726242 | None:intergenic | 35.0% | |
TCTTTATCTTGTCTTCAGAC+AGG | - | chr4.4:72726973-72726992 | None:intergenic | 35.0% | |
TGATCTCATATTAAAGGACG+AGG | + | chr4.4:72726222-72726241 | MS.gene48740:intron | 35.0% | |
TTCACTTTCCCTCAAACAAA+GGG | + | chr4.4:72726803-72726822 | MS.gene48740:CDS | 35.0% | |
TTGGAAGAGATTAATGAGAG+CGG | - | chr4.4:72726498-72726517 | None:intergenic | 35.0% | |
TTTCACTTTCCCTCAAACAA+AGG | + | chr4.4:72726802-72726821 | MS.gene48740:CDS | 35.0% | |
TTTCGGCTATACAATCAATC+CGG | + | chr4.4:72726599-72726618 | MS.gene48740:CDS | 35.0% | |
! | AAAGTGTTTGATCAGAGTTG+AGG | - | chr4.4:72726784-72726803 | None:intergenic | 35.0% |
! | CAATATTTCAAGGACTTGGT+TGG | + | chr4.4:72726746-72726765 | MS.gene48740:CDS | 35.0% |
! | TGAAGTTGTTGATGAGGTTA+AGG | + | chr4.4:72725657-72725676 | MS.gene48740:CDS | 35.0% |
!!! | CATGTTTTTGAGTAATACCC+TGG | - | chr4.4:72725139-72725158 | None:intergenic | 35.0% |
AAATCACAGGAGTTGCATCA+AGG | - | chr4.4:72726718-72726737 | None:intergenic | 40.0% | |
ACCGCCTGATCTCATATTAA+AGG | + | chr4.4:72726216-72726235 | MS.gene48740:intron | 40.0% | |
ATAACAGAGGCAACACTTCT+TGG | - | chr4.4:72725217-72725236 | None:intergenic | 40.0% | |
CAATTCTTCCTAACTTCACC+AGG | - | chr4.4:72726920-72726939 | None:intergenic | 40.0% | |
CCTAATCTCACTTCCCAATT+AGG | - | chr4.4:72726404-72726423 | None:intergenic | 40.0% | |
CCTAATTGGGAAGTGAGATT+AGG | + | chr4.4:72726401-72726420 | MS.gene48740:CDS | 40.0% | |
CTATACAATCAATCCGGTAG+CGG | + | chr4.4:72726605-72726624 | MS.gene48740:CDS | 40.0% | |
GATGATACACCAACTATGCT+TGG | + | chr4.4:72725592-72725611 | MS.gene48740:CDS | 40.0% | |
GGAAGTGAGATTAGGAAGAT+TGG | + | chr4.4:72726409-72726428 | MS.gene48740:CDS | 40.0% | |
TCACTTTCATTACAGACAGG+AGG | + | chr4.4:72726377-72726396 | MS.gene48740:intron | 40.0% | |
TCACTTTCCCTCAAACAAAG+GGG | + | chr4.4:72726804-72726823 | MS.gene48740:CDS | 40.0% | |
! | GTAGCATTAGTTCTTGGACT+TGG | - | chr4.4:72726476-72726495 | None:intergenic | 40.0% |
! | TATTTCAAGGACTTGGTTGG+TGG | + | chr4.4:72726749-72726768 | MS.gene48740:CDS | 40.0% |
! | TCACAAACCCCTTTGTTTGA+GGG | - | chr4.4:72726814-72726833 | None:intergenic | 40.0% |
AAAGACCTTGTAGCACTCTC+AGG | + | chr4.4:72726536-72726555 | MS.gene48740:CDS | 45.0% | |
ACAGACAGGAGGACCTAATT+GGG | + | chr4.4:72726388-72726407 | MS.gene48740:intron | 45.0% | |
CTACAAGGTCTTTGACACTG+AGG | - | chr4.4:72726529-72726548 | None:intergenic | 45.0% | |
CTCTCAGGATCACACTCTAT+CGG | + | chr4.4:72726551-72726570 | MS.gene48740:CDS | 45.0% | |
CTGATAAGCCTGGTGAAGTT+AGG | + | chr4.4:72726909-72726928 | MS.gene48740:CDS | 45.0% | |
TACAGACAGGAGGACCTAAT+TGG | + | chr4.4:72726387-72726406 | MS.gene48740:intron | 45.0% | |
TCAGCACAAGAAACAACTCC+AGG | - | chr4.4:72725703-72725722 | None:intergenic | 45.0% | |
TCTTCAGACAGGATATGAGC+AGG | - | chr4.4:72726962-72726981 | None:intergenic | 45.0% | |
! | AGAGCGGTAGCATTAGTTCT+TGG | - | chr4.4:72726482-72726501 | None:intergenic | 45.0% |
! | CTCACAAACCCCTTTGTTTG+AGG | - | chr4.4:72726815-72726834 | None:intergenic | 45.0% |
! | GAATTTGTGAAGGGGTGTGA+TGG | + | chr4.4:72725556-72725575 | MS.gene48740:intron | 45.0% |
! | TTCTAGAGATGCTGTAGCAC+TGG | + | chr4.4:72725738-72725757 | MS.gene48740:CDS | 45.0% |
ACAGGATCAATTGCAGGGTC+AGG | - | chr4.4:72726635-72726654 | None:intergenic | 50.0% | |
GACTTGCAGTCTGATAAGCC+TGG | + | chr4.4:72726899-72726918 | MS.gene48740:CDS | 50.0% | |
! | GCTGTAGAGAAAGCATGTCC+TGG | + | chr4.4:72725682-72725701 | MS.gene48740:CDS | 50.0% |
!! | AAGGACTTGGTTGGTGGAAG+AGG | + | chr4.4:72726755-72726774 | MS.gene48740:CDS | 50.0% |
!! | GTGATCCTGAGAGTGCTACA+AGG | - | chr4.4:72726544-72726563 | None:intergenic | 50.0% |
ACATCAGCGGATCTTCGACC+AGG | + | chr4.4:72725118-72725137 | MS.gene48740:CDS | 55.0% | |
CATCAGCGGATCTTCGACCA+GGG | + | chr4.4:72725119-72725138 | MS.gene48740:CDS | 55.0% | |
AGGGTCAGGCTTTCCGCTAC+CGG | - | chr4.4:72726621-72726640 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 72725049 | 72727012 | 72725049 | ID=MS.gene48740 |
chr4.4 | mRNA | 72725049 | 72727012 | 72725049 | ID=MS.gene48740.t1;Parent=MS.gene48740 |
chr4.4 | exon | 72725049 | 72725267 | 72725049 | ID=MS.gene48740.t1.exon1;Parent=MS.gene48740.t1 |
chr4.4 | CDS | 72725049 | 72725267 | 72725049 | ID=cds.MS.gene48740.t1;Parent=MS.gene48740.t1 |
chr4.4 | exon | 72725568 | 72725759 | 72725568 | ID=MS.gene48740.t1.exon2;Parent=MS.gene48740.t1 |
chr4.4 | CDS | 72725568 | 72725759 | 72725568 | ID=cds.MS.gene48740.t1;Parent=MS.gene48740.t1 |
chr4.4 | exon | 72726392 | 72727012 | 72726392 | ID=MS.gene48740.t1.exon3;Parent=MS.gene48740.t1 |
chr4.4 | CDS | 72726392 | 72727012 | 72726392 | ID=cds.MS.gene48740.t1;Parent=MS.gene48740.t1 |
Gene Sequence |
Protein sequence |