AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49059

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49059.t1 MTR_1g101280 98.938 753 8 0 40 792 1 753 0.0 1541
MS.gene49059.t1 MTR_8g432540 65.146 789 243 13 14 790 39 807 0.0 999
MS.gene49059.t1 MTR_7g076080 65.706 729 221 9 69 790 69 775 0.0 976
MS.gene49059.t1 MTR_0198s0030 58.279 767 293 12 40 792 1 754 0.0 874
MS.gene49059.t1 MTR_2g088470 53.678 734 301 10 60 789 34 732 0.0 740
MS.gene49059.t1 MTR_4g047800 51.907 734 317 11 60 789 28 729 0.0 730
MS.gene49059.t1 MTR_6g477820 46.271 724 348 15 86 789 21 723 0.0 630
MS.gene49059.t1 MTR_5g029320 41.351 740 403 16 63 789 57 778 0.0 585
MS.gene49059.t1 MTR_2g101720 41.810 696 351 11 99 789 143 789 0.0 562
MS.gene49059.t1 MTR_5g005600 40.327 734 388 15 68 789 21 716 4.89e-176 523
MS.gene49059.t1 MTR_7g427710 41.713 712 313 21 93 789 14 638 2.89e-167 498
MS.gene49059.t1 MTR_2g030570 33.700 727 422 18 81 789 11 695 2.07e-127 397
MS.gene49059.t1 MTR_2g030600 32.780 723 427 18 81 789 11 688 2.52e-117 370
MS.gene49059.t1 MTR_2g030660 31.850 719 407 21 80 789 3 647 1.20e-97 317
MS.gene49059.t1 MTR_7g427690 40.500 400 203 12 273 662 38 412 2.34e-90 292
MS.gene49059.t1 MTR_2g083330 34.026 529 288 12 301 789 18 525 1.56e-82 274
MS.gene49059.t1 MTR_2g083350 33.522 531 291 13 301 789 21 531 4.41e-82 273
MS.gene49059.t1 MTR_7g427700 35.976 328 141 8 93 413 14 279 1.67e-52 189
MS.gene49059.t1 MTR_7g427700 45.625 160 73 5 635 789 281 431 1.53e-28 119
MS.gene49059.t1 MTR_0653s0020 45.503 189 84 6 478 664 1 172 2.73e-44 158
MS.gene49059.t1 MTR_5g046040 46.067 178 90 3 90 263 28 203 1.10e-40 154
MS.gene49059.t1 MTR_7g027265 53.333 120 56 0 95 214 17 136 3.65e-37 136
MS.gene49059.t1 MTR_2g030690 31.864 295 177 9 501 789 1 277 2.55e-30 121
MS.gene49059.t1 MTR_1g105420 31.905 210 105 5 150 351 1 180 7.87e-22 95.1
MS.gene49059.t1 MTR_0653s0010 46.094 128 45 4 674 790 1 115 4.81e-21 89.7
MS.gene49059.t1 MTR_6g027290 31.875 160 100 2 79 233 9 164 8.30e-20 88.2
MS.gene49059.t1 MTR_7g027605 41.304 92 52 2 384 475 2 91 3.34e-18 80.5
MS.gene49059.t1 MTR_2g451350 28.244 131 93 1 309 438 1 131 1.88e-15 74.3
MS.gene49059.t1 MTR_7g427670 40.816 98 42 2 149 246 32 113 9.31e-14 68.9
MS.gene49059.t1 MTR_2g030720 30.137 146 87 3 99 244 22 152 5.78e-13 67.8
MS.gene49059.t1 MTR_1g061660 38.679 106 54 4 91 189 55 156 1.03e-11 65.9
MS.gene49059.t1 MTR_2g101740 59.091 44 18 0 746 789 26 69 6.97e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49059.t1 AT4G00730 62.838 740 241 9 51 790 94 799 0.0 914
MS.gene49059.t1 AT3G61150 58.313 818 272 15 1 789 26 803 0.0 904
MS.gene49059.t1 AT4G04890 53.117 738 318 12 54 789 24 735 0.0 769
MS.gene49059.t1 AT4G04890 53.117 738 318 12 54 789 24 735 0.0 769
MS.gene49059.t1 AT5G52170 51.774 761 277 14 40 791 1 680 0.0 746
MS.gene49059.t1 AT5G52170 51.774 761 277 14 40 791 1 680 0.0 746
MS.gene49059.t1 AT1G05230 51.565 735 304 12 59 789 30 716 0.0 742
MS.gene49059.t1 AT1G05230 51.565 735 304 12 59 789 30 716 0.0 742
MS.gene49059.t1 AT1G05230 51.565 735 304 12 59 789 30 716 0.0 742
MS.gene49059.t1 AT1G05230 51.565 735 304 12 59 789 30 716 0.0 742
MS.gene49059.t1 AT1G05230 51.565 735 304 12 59 789 30 716 0.0 742
MS.gene49059.t1 AT1G05230 51.565 735 304 12 59 789 30 716 0.0 742
MS.gene49059.t1 AT1G05230 51.565 735 304 12 59 789 30 716 0.0 742
MS.gene49059.t1 AT1G05230 51.565 735 304 12 59 789 30 716 0.0 742
MS.gene49059.t1 AT1G05230 51.565 735 304 12 59 789 30 716 0.0 742
MS.gene49059.t1 AT1G05230 51.565 735 304 12 59 789 30 716 0.0 742
MS.gene49059.t1 AT5G52170 51.436 766 277 15 40 791 1 685 0.0 740
MS.gene49059.t1 AT4G21750 50.921 760 323 12 54 789 24 757 0.0 735
MS.gene49059.t1 AT4G21750 50.921 760 323 12 54 789 24 757 0.0 735
MS.gene49059.t1 AT4G21750 50.921 760 323 12 54 789 24 757 0.0 735
MS.gene49059.t1 AT4G21750 50.921 760 323 12 54 789 24 757 0.0 735
MS.gene49059.t1 AT1G05230 51.429 735 303 13 59 789 30 714 0.0 734
MS.gene49059.t1 AT1G05230 50.325 616 265 11 54 665 25 603 0.0 607
MS.gene49059.t1 AT1G73360 46.273 711 339 14 94 789 31 713 0.0 606
MS.gene49059.t1 AT4G00730 60.446 493 168 7 51 543 94 559 0.0 588
MS.gene49059.t1 AT1G17920 44.587 702 335 14 98 789 24 681 0.0 587
MS.gene49059.t1 AT1G17920 44.587 702 335 14 98 789 24 681 0.0 587
MS.gene49059.t1 AT2G32370 40.028 727 377 12 70 786 40 717 0.0 545
MS.gene49059.t1 AT1G79840 39.860 715 358 15 87 791 34 686 3.12e-177 525
MS.gene49059.t1 AT1G79840 39.860 715 358 15 87 791 34 686 3.12e-177 525
MS.gene49059.t1 AT1G79840 39.860 715 358 15 87 791 92 744 1.12e-176 526
MS.gene49059.t1 AT1G79840 39.860 715 358 15 87 791 121 773 1.33e-175 524
MS.gene49059.t1 AT5G46880 39.838 743 386 20 79 789 93 806 7.62e-172 516
MS.gene49059.t1 AT5G46880 39.838 743 386 20 79 789 93 806 7.62e-172 516
MS.gene49059.t1 AT5G46880 39.838 743 386 20 79 789 93 806 7.62e-172 516
MS.gene49059.t1 AT4G25530 39.028 720 367 15 76 789 29 682 1.91e-164 492
MS.gene49059.t1 AT1G79840 40.000 585 285 13 87 661 92 620 9.61e-143 434
MS.gene49059.t1 AT3G03260 34.060 734 415 17 79 789 7 694 2.52e-136 420
MS.gene49059.t1 AT4G17710 34.907 699 368 16 95 789 88 703 1.91e-129 402
MS.gene49059.t1 AT5G17320 34.008 741 439 22 74 790 2 716 3.26e-122 384
MS.gene49059.t1 AT1G34650 32.642 723 440 16 85 789 12 705 1.23e-113 361
MS.gene49059.t1 AT3G03260 33.511 564 334 13 79 633 7 538 9.73e-102 325
MS.gene49059.t1 AT1G79840 38.013 463 223 11 87 540 92 499 1.23e-98 316
MS.gene49059.t1 AT5G07260 25.841 565 335 16 160 722 9 491 1.17e-48 181
MS.gene49059.t1 AT5G07260 26.018 565 329 16 160 722 9 486 1.74e-48 180
MS.gene49059.t1 AT1G30490 37.255 102 55 3 81 178 6 102 4.43e-11 67.0

Find 214 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCGTCCGTTGCTTATTTC+TGG 0.113009 1.3:-69782004 MS.gene49059:CDS
CCGTTGCTTATTTCTGGTTT+TGG 0.171502 1.3:-69781998 MS.gene49059:CDS
GGTGCTCTTCGAACAATATT+TGG 0.196521 1.3:+69783952 None:intergenic
AGATAGTCCTGTTTGGATTA+AGG 0.220607 1.3:-69783583 MS.gene49059:CDS
GAAGACTATTCACCAGAATT+TGG 0.222863 1.3:+69780930 None:intergenic
TCATTTGGGTTCGACGATTC+TGG 0.227937 1.3:+69784351 None:intergenic
GTGCTTCATCTGCTAGAAAA+TGG 0.232062 1.3:-69781707 MS.gene49059:CDS
TTTGATCTTGAAGGATTATC+TGG 0.248253 1.3:-69784656 MS.gene49059:CDS
ATTTAATCTTCACCTTCATT+TGG 0.253274 1.3:+69784336 None:intergenic
CCACCACAGTTGTTACATAT+TGG 0.279446 1.3:+69783990 None:intergenic
ATGACCAACAACTTCTGTTC+TGG 0.284388 1.3:-69781735 MS.gene49059:CDS
GATAGTCCTGTTTGGATTAA+GGG 0.285548 1.3:-69783582 MS.gene49059:CDS
AAAATAAACAAGTCAAATTC+TGG 0.292831 1.3:-69784376 MS.gene49059:CDS
TCCTGTTTGGATTAAGGGTT+TGG 0.303275 1.3:-69783577 MS.gene49059:CDS
GGATTAGCCAATGATGATAT+TGG 0.305207 1.3:+69783852 None:intergenic
TTTAATCTTCACCTTCATTT+GGG 0.314861 1.3:+69784337 None:intergenic
GACAAGTCTTGCAACCTTAC+AGG 0.315039 1.3:+69784988 None:intergenic
CACAGTCGGATTCCAAATTC+TGG 0.317732 1.3:-69780942 MS.gene49059:CDS
TATGTTGCACTCTTGCCTTC+AGG 0.326578 1.3:-69781064 MS.gene49059:CDS
TCAAGCTCTTGAATTTGATT+AGG 0.330233 1.3:+69784569 None:intergenic
TTGGATTTGGCGCTCATAGA+TGG 0.334166 1.3:-69781979 MS.gene49059:CDS
GCAACAAAGCCAGCAGGTTT+AGG 0.343857 1.3:+69783492 None:intergenic
CGGTTGATTTCTTCTTGTAT+TGG 0.345564 1.3:-69783516 MS.gene49059:CDS
AACAGTCTTTGTCGTGAAAC+TGG 0.348067 1.3:+69781567 None:intergenic
CCAAGCCTTCACACTGCCTT+TGG 0.351820 1.3:+69781945 None:intergenic
GCTCTACCATCCTCAAATTC+TGG 0.354909 1.3:-69783825 MS.gene49059:CDS
GTTTCCTTGCCCTTGACCTT+TGG 0.362517 1.3:+69781461 None:intergenic
ATGAATGGTTGTGCATTAGA+AGG 0.380812 1.3:+69782911 None:intergenic
TCTGGTCTGGAACTTGGTAT+TGG 0.381053 1.3:-69783807 MS.gene49059:CDS
ACGATACCGGGAGGCTCGCC+AGG 0.388787 1.3:+69781618 None:intergenic
TAGTTCACCAATGGGATTGA+TGG 0.393674 1.3:-69783694 MS.gene49059:CDS
TCTTAGCAAGAGACTTGGTT+TGG 0.395711 1.3:-69784399 MS.gene49059:CDS
AATATTTGGCCAGGAATTGC+TGG 0.396823 1.3:+69783966 None:intergenic
AGCAGCATGCAGAAGGTGTA+TGG 0.397562 1.3:-69782970 MS.gene49059:CDS
GGTATTGGAAGGAACGGTTT+TGG 0.397790 1.3:-69783792 MS.gene49059:CDS
TTCAATGATTGCCCGTCAAC+TGG 0.404111 1.3:+69781115 None:intergenic
TGTTTGTTAAGGCACATATA+CGG 0.406272 1.3:+69783889 None:intergenic
GCCAAGGAACTTGTTTGTTA+AGG 0.406883 1.3:+69783878 None:intergenic
GCTGAAGCTACGAGAGAAAC+CGG 0.410030 1.3:-69783471 MS.gene49059:CDS
AACTGACTCCATTGTGAGCT+TGG 0.411048 1.3:+69780901 None:intergenic
TGACCAACAACTTCTGTTCT+GGG 0.413733 1.3:-69781734 MS.gene49059:CDS
AGATCTTGCATTGGCTGCTA+TGG 0.415072 1.3:-69783631 MS.gene49059:CDS
TGTGGTGGACCAGCAATTCC+TGG 0.416505 1.3:-69783975 MS.gene49059:CDS
CTCGGCAATCCTTTGCCAAT+GGG 0.418291 1.3:-69783753 MS.gene49059:CDS
CTCAGACAGATAGTCCTGTT+TGG 0.418832 1.3:-69783590 MS.gene49059:CDS
AAGAAATGGTGCTATACATT+TGG 0.420804 1.3:-69783144 MS.gene49059:intron
TTTGTTGAATCAGACTCAAC+TGG 0.422317 1.3:-69784096 MS.gene49059:intron
AGGATTCTCACTTGACGAAC+CGG 0.422609 1.3:+69783004 None:intergenic
TGTATTGGTCCTAAACCTGC+TGG 0.422932 1.3:-69783501 MS.gene49059:CDS
CTTACCTTGGAGTAACCATT+TGG 0.423156 1.3:+69782845 None:intergenic
GTTGATGTTTCTGTTGAGAT+TGG 0.423253 1.3:-69782941 MS.gene49059:CDS
AGCGATAACTTTGATCTTGA+AGG 0.423316 1.3:-69784665 MS.gene49059:CDS
AGCCTTCACACTGCCTTTGG+AGG 0.424623 1.3:+69781948 None:intergenic
CATCACTCAGAGTCCCCATT+TGG 0.425038 1.3:+69781676 None:intergenic
TGCTTCATCTGCTAGAAAAT+GGG 0.434105 1.3:-69781706 MS.gene49059:CDS
TCCTTCTGGCTGTATTGTGC+AGG 0.438832 1.3:-69782873 MS.gene49059:CDS
TTAGCGCTGCAACATCTGTT+TGG 0.439034 1.3:-69781593 MS.gene49059:CDS
TCAAATTCTGGTCTGGAACT+TGG 0.441450 1.3:-69783813 MS.gene49059:CDS
AGCTTAGATACTGGTCTGCT+TGG 0.441475 1.3:-69784725 MS.gene49059:CDS
ATGGAGGGGCAGAGTGAGAT+TGG 0.448707 1.3:-69784761 MS.gene49059:CDS
AATTGAAAACGCCCGTCTAA+AGG 0.449088 1.3:-69783922 MS.gene49059:CDS
AAGATCAAAGTTATCGCTTC+CGG 0.452078 1.3:+69784670 None:intergenic
AGCACTTGTGGAAACTTTGA+TGG 0.452399 1.3:-69783427 MS.gene49059:CDS
ACCATCCTCAAATTCTGGTC+TGG 0.453392 1.3:-69783820 MS.gene49059:CDS
GTTCAATTCGTCCTTTAGAC+GGG 0.453733 1.3:+69783911 None:intergenic
AAAATGGGACAGCCTCCAAA+TGG 0.457660 1.3:-69781691 MS.gene49059:CDS
GGTGGTGCTGGCGATGGTGG+TGG 0.459096 1.3:-69780974 MS.gene49059:CDS
ACATGCTTCTTCTACCAGCT+TGG 0.460496 1.3:+69781775 None:intergenic
TCCAAACCCTTAATCCAAAC+AGG 0.460668 1.3:+69783576 None:intergenic
CAAAGTTATCGCTTCCGGAC+CGG 0.465356 1.3:+69784675 None:intergenic
TGGCAAACCAATATCATCAT+TGG 0.472028 1.3:-69783859 MS.gene49059:CDS
TGTTGATTCTGCAAGAAACT+TGG 0.473065 1.3:-69781171 MS.gene49059:CDS
AATCAACAGTTTAGCACTTG+TGG 0.473233 1.3:-69783439 MS.gene49059:CDS
CCTCGGCAATCCTTTGCCAA+TGG 0.475104 1.3:-69783754 MS.gene49059:CDS
GGCTTTGCAATTGTTCCTGA+TGG 0.475420 1.3:-69781043 MS.gene49059:CDS
TTGCCAATGGGACTTGATCT+CGG 0.479358 1.3:-69783741 MS.gene49059:CDS
GCCTTAACAAACAAGTTCCT+TGG 0.480879 1.3:-69783879 MS.gene49059:CDS
TGCAGCGCTAAGCACGATAC+CGG 0.481258 1.3:+69781605 None:intergenic
GCCTTCACACTGCCTTTGGA+GGG 0.482232 1.3:+69781949 None:intergenic
AAGTTCCAGACCAGAATTTG+AGG 0.483874 1.3:+69783815 None:intergenic
GGTGGTGGTTCAAGCTCCCT+CGG 0.484315 1.3:-69783771 MS.gene49059:CDS
TCTGGCTACGGCATGTCAAA+TGG 0.484409 1.3:-69781010 MS.gene49059:CDS
GATGACCCTGGCGAGCCTCC+CGG 0.485077 1.3:-69781624 MS.gene49059:CDS
AGGAAAATGACAAGCTAAGA+GGG 0.487415 1.3:-69784046 MS.gene49059:CDS
GTGGTGTATGCACCAGTTGA+CGG 0.489013 1.3:-69781127 MS.gene49059:CDS
AAATGGGACAGCCTCCAAAT+GGG 0.490793 1.3:-69781690 MS.gene49059:CDS
GGTTCAATTCGTCCTTTAGA+CGG 0.491156 1.3:+69783910 None:intergenic
AGGATTATCTGGTGATGATC+AGG 0.493656 1.3:-69784645 MS.gene49059:CDS
AGGTCACTTGGATTGAGCAC+TGG 0.495140 1.3:-69782057 MS.gene49059:CDS
GCTTAGATACTGGTCTGCTT+GGG 0.495575 1.3:-69784724 MS.gene49059:CDS
AGCTGTAGAAGACTTCCTTC+TGG 0.496424 1.3:-69782887 MS.gene49059:CDS
TTGCATTGTTGTAGGTCACT+TGG 0.496497 1.3:-69782069 MS.gene49059:intron
GTTTGGATTAAGGGTTTGGA+TGG 0.496569 1.3:-69783573 MS.gene49059:CDS
ACAGTTGATAAGAAAGAAGA+TGG 0.497161 1.3:+69784926 None:intergenic
ACTGTTGATTATTACTATCC+CGG 0.497411 1.3:+69783452 None:intergenic
CCTGGTATTAGTTCACCAAT+GGG 0.499291 1.3:-69783702 MS.gene49059:CDS
CCAAAGGCAGTGTGAAGGCT+TGG 0.499979 1.3:-69781945 MS.gene49059:CDS
GGATTCTCACTTGACGAACC+GGG 0.501488 1.3:+69783005 None:intergenic
GATGAGTATGAAAGCCGGTC+CGG 0.502821 1.3:-69784689 MS.gene49059:CDS
CCCATTGGTGAACTAATACC+AGG 0.505164 1.3:+69783702 None:intergenic
CACTCAGAGTCCCCATTTGG+AGG 0.506413 1.3:+69781679 None:intergenic
TGATGTTCAGCTTGAGAGAT+CGG 0.507347 1.3:-69783661 MS.gene49059:CDS
ACTGGTGATAGCTTAGATAC+TGG 0.508547 1.3:-69784734 MS.gene49059:CDS
TTCACACTGCCTTTGGAGGG+TGG 0.511667 1.3:+69781952 None:intergenic
CAGAGTGAGATTGGTCTCAC+TGG 0.512660 1.3:-69784752 MS.gene49059:CDS
AGTCTTCTACAGCTTATGAA+TGG 0.512664 1.3:+69782896 None:intergenic
GGTAATGATCCCTCTGGCTA+CGG 0.514599 1.3:-69781022 MS.gene49059:CDS
TTCGTCAAGTGAGAATCCTT+CGG 0.514988 1.3:-69783000 MS.gene49059:CDS
TATGGATGAATTATTAAAGA+TGG 0.515193 1.3:-69783613 MS.gene49059:CDS
TGAGAACATAATGCTTAGGC+AGG 0.515881 1.3:-69784066 MS.gene49059:CDS
ATTGCTTTCACCACTAGTCC+CGG 0.516885 1.3:-69783023 MS.gene49059:CDS
AGTTCACCAATGGGATTGAT+GGG 0.519574 1.3:-69783693 MS.gene49059:CDS
TAGAAGAAGCATGTTGAAGC+TGG 0.521232 1.3:-69781766 MS.gene49059:CDS
TCTTCGAACAATATTTGGCC+AGG 0.521570 1.3:+69783957 None:intergenic
GGAGATGGTCGCTCAATGCC+TGG 0.523620 1.3:-69783720 MS.gene49059:CDS
GCCTGGTATTAGTTCACCAA+TGG 0.525635 1.3:-69783703 MS.gene49059:CDS
AAAGGTGGTGCTGGCGATGG+TGG 0.526742 1.3:-69780977 MS.gene49059:CDS
GGTCACTTGGATTGAGCACT+GGG 0.528082 1.3:-69782056 MS.gene49059:CDS
TGCAGCTTTGATCTTCTGAA+TGG 0.531714 1.3:+69780850 None:intergenic
GTTCACATTGCCAAAGGTCA+AGG 0.536772 1.3:-69781471 MS.gene49059:CDS
GGATACATCTTGCTCGGTGG+TGG 0.536827 1.3:-69781146 MS.gene49059:CDS
TTTGCAGCATTGAGCCAAGC+TGG 0.536871 1.3:-69781789 MS.gene49059:intron
GAGTGTGAACAGTTCCTGTA+AGG 0.537925 1.3:-69785002 MS.gene49059:CDS
GGAATCGGTGGAACAAGAAA+TGG 0.540658 1.3:-69783158 MS.gene49059:CDS
CAGGAAAATGACAAGCTAAG+AGG 0.541163 1.3:-69784047 MS.gene49059:CDS
ATGAAAGGCTTAGAAGCGAG+TGG 0.543168 1.3:-69781530 MS.gene49059:CDS
CCAGAGGGATCATTACCATC+AGG 0.544598 1.3:+69781028 None:intergenic
AACCCCAGAACAGAAGTTGT+TGG 0.545437 1.3:+69781731 None:intergenic
GAATCGTCGAACCCAAATGA+AGG 0.545567 1.3:-69784348 MS.gene49059:intron
GGTGGAAGTTTGCTCACAGT+CGG 0.546541 1.3:-69780956 MS.gene49059:CDS
TTCTGTAAGCAGCATGCAGA+AGG 0.546904 1.3:-69782977 MS.gene49059:CDS
GGCTCTAATAGATCTTGCAT+TGG 0.550601 1.3:-69783640 MS.gene49059:CDS
TTTGAGGATGGTAGAGCCAT+GGG 0.555597 1.3:+69783831 None:intergenic
GTGATGATGGTCAGCGCAAG+AGG 0.555699 1.3:-69784616 MS.gene49059:CDS
ATCATCATTGGCTAATCCCA+TGG 0.556384 1.3:-69783847 MS.gene49059:CDS
GATCAGGATGGTGGTGATGA+TGG 0.558173 1.3:-69784629 MS.gene49059:CDS
AATGTGAACCATCTCTTGCA+TGG 0.559591 1.3:+69781485 None:intergenic
TCAAATGGTACTTTACAGAA+AGG 0.561442 1.3:-69780995 MS.gene49059:CDS
CCTGATGGTAATGATCCCTC+TGG 0.562249 1.3:-69781028 MS.gene49059:CDS
TGGTGTATGCACCAGTTGAC+GGG 0.562286 1.3:-69781126 MS.gene49059:CDS
ATGGGACTTGATCTCGGAGA+TGG 0.563438 1.3:-69783735 MS.gene49059:CDS
GTCTGGAACTTGGTATTGGA+AGG 0.563807 1.3:-69783803 MS.gene49059:CDS
GGCATGAGAACATAATGCTT+AGG 0.566863 1.3:-69784070 MS.gene49059:CDS
CAGAAAGGTGGTGCTGGCGA+TGG 0.567714 1.3:-69780980 MS.gene49059:CDS
ATGTGAACCATCTCTTGCAT+GGG 0.567812 1.3:+69781486 None:intergenic
GCTTCAGCAACAAAGCCAGC+AGG 0.568459 1.3:+69783486 None:intergenic
TCCATTGTGAGCTTGGCAGT+TGG 0.569368 1.3:+69780908 None:intergenic
TTGGATCTTAGCAAGAGACT+TGG 0.569590 1.3:-69784404 MS.gene49059:CDS
ACCAGATAAAACATCAAGGT+TGG 0.570465 1.3:+69783181 None:intergenic
ATTTGAGGATGGTAGAGCCA+TGG 0.573157 1.3:+69783830 None:intergenic
CTACTTCCCATCAATCCCAT+TGG 0.573723 1.3:+69783687 None:intergenic
ACTTTACAGAAAGGTGGTGC+TGG 0.574608 1.3:-69780986 MS.gene49059:CDS
GGCGTGATCATCGTTTGAGA+TGG 0.587802 1.3:+69781904 None:intergenic
ACCCTCCAAAGGCAGTGTGA+AGG 0.587970 1.3:-69781950 MS.gene49059:CDS
TTGGATGGATACATCTTGCT+CGG 0.589147 1.3:-69781152 MS.gene49059:CDS
CCAATATGTAACAACTGTGG+TGG 0.591280 1.3:-69783990 MS.gene49059:CDS
TGGTGGACCCATGCAAGAGA+TGG 0.592249 1.3:-69781493 MS.gene49059:CDS
GATTCTGCAAGAAACTTGGA+TGG 0.592935 1.3:-69781167 MS.gene49059:CDS
GACCAACAACTTCTGTTCTG+GGG 0.596269 1.3:-69781733 MS.gene49059:CDS
GCAGCATGCAGAAGGTGTAT+GGG 0.596526 1.3:-69782969 MS.gene49059:CDS
GAACTTGGTATTGGAAGGAA+CGG 0.597234 1.3:-69783798 MS.gene49059:CDS
GATGGATCGCCACCCTCCAA+AGG 0.597522 1.3:-69781961 MS.gene49059:CDS
GGAACAATTGCAAAGCCTGA+AGG 0.597670 1.3:+69781049 None:intergenic
TCCAGACCAGAATTTGAGGA+TGG 0.597964 1.3:+69783819 None:intergenic
GCAGCGCTAAGCACGATACC+GGG 0.598314 1.3:+69781606 None:intergenic
ACTTGACGAACCGGGACTAG+TGG 0.600610 1.3:+69783013 None:intergenic
AGATCAAGTCCCATTGGCAA+AGG 0.604435 1.3:+69783744 None:intergenic
TCTCCGAGATCAAGTCCCAT+TGG 0.604534 1.3:+69783738 None:intergenic
TAGCATGATGAAAGAAGCAA+TGG 0.604769 1.3:-69784018 MS.gene49059:CDS
TGCAGAAGGTGTATGGGCCG+TGG 0.605614 1.3:-69782963 MS.gene49059:CDS
TTGAATGTGGTGATGAGTGG+TGG 0.609782 1.3:-69781097 MS.gene49059:CDS
ATGATGATATTGGTTTGCCA+AGG 0.610133 1.3:+69783862 None:intergenic
CATGCTGCTTACAGAACCGA+AGG 0.611995 1.3:+69782984 None:intergenic
CTGAAGCTACGAGAGAAACC+GGG 0.615105 1.3:-69783470 MS.gene49059:CDS
ATCATCGTTTGAGATGGAAG+AGG 0.615317 1.3:+69781910 None:intergenic
TAAGCAACGGACGATAGAGT+TGG 0.616243 1.3:+69782011 None:intergenic
TGTGGAAACTTTGATGGATG+CGG 0.616357 1.3:-69783421 MS.gene49059:intron
TCCAACTGCCAAGCTCACAA+TGG 0.619453 1.3:-69780909 MS.gene49059:CDS
TGAATCAGACTCAACTGGAA+AGG 0.621264 1.3:-69784091 MS.gene49059:intron
GAGAGGATGAGTATGAAAGC+CGG 0.622277 1.3:-69784694 MS.gene49059:CDS
TTCACATTGCCAAAGGTCAA+GGG 0.624942 1.3:-69781470 MS.gene49059:CDS
ATGACATGAGAGTTATGACT+AGG 0.627138 1.3:-69781656 MS.gene49059:CDS
TATGCCAAATGGTTACTCCA+AGG 0.627451 1.3:-69782849 MS.gene49059:intron
ATTTGACATGCCGTAGCCAG+AGG 0.627533 1.3:+69781012 None:intergenic
TTCCACCAGATAAAACATCA+AGG 0.627792 1.3:+69783177 None:intergenic
ATTGCCAAAGGTCAAGGGCA+AGG 0.631892 1.3:-69781465 MS.gene49059:CDS
GCAATTTCAGATGCATACTG+AGG 0.637345 1.3:-69783050 MS.gene49059:intron
TTTGATTAGGAGTGTGTCTG+TGG 0.637619 1.3:+69784582 None:intergenic
TTTGACATGCCGTAGCCAGA+GGG 0.639169 1.3:+69781013 None:intergenic
TGAAAGGCTTAGAAGCGAGT+GGG 0.641966 1.3:-69781529 MS.gene49059:CDS
TGAATCAAGAAGAGTACGGA+CGG 0.644346 1.3:-69783536 MS.gene49059:CDS
ATTGTGCAGGATATGCCAAA+TGG 0.645079 1.3:-69782860 MS.gene49059:CDS
AATGGGACAGCCTCCAAATG+GGG 0.646605 1.3:-69781689 MS.gene49059:CDS
AATGGTACTTTACAGAAAGG+TGG 0.653820 1.3:-69780992 MS.gene49059:CDS
TTGAGATGGAAGAGGACATG+AGG 0.654253 1.3:+69781918 None:intergenic
GAGATGGTTCACATTGCCAA+AGG 0.654763 1.3:-69781477 MS.gene49059:CDS
TCCTGCACAATACAGCCAGA+AGG 0.655286 1.3:+69782872 None:intergenic
CGATACCGGGAGGCTCGCCA+GGG 0.655976 1.3:+69781619 None:intergenic
CTCAACAGAAACATCAACCA+CGG 0.657444 1.3:+69782946 None:intergenic
TCATTGAATGTGGTGATGAG+TGG 0.663206 1.3:-69781100 MS.gene49059:CDS
GCGCTAAGCACGATACCGGG+AGG 0.668252 1.3:+69781609 None:intergenic
ATATTGAATCAAGAAGAGTA+CGG 0.676694 1.3:-69783540 MS.gene49059:CDS
CCAAAACCAGAAATAAGCAA+CGG 0.679772 1.3:+69781998 None:intergenic
GATGGATACATCTTGCTCGG+TGG 0.691053 1.3:-69781149 MS.gene49059:CDS
CATTGGCAAAGGATTGCCGA+GGG 0.693173 1.3:+69783755 None:intergenic
TCTGCTTGGGAGAATGAGAG+AGG 0.693480 1.3:-69784711 MS.gene49059:CDS
GGAAAATGACAAGCTAAGAG+GGG 0.705532 1.3:-69784045 MS.gene49059:CDS
TAAAACTTACATTAGCACGA+AGG 0.708878 1.3:+69781427 None:intergenic
TGACGGGCAATCATTGAATG+TGG 0.709763 1.3:-69781110 MS.gene49059:CDS
CCATTGGCAAAGGATTGCCG+AGG 0.716261 1.3:+69783754 None:intergenic
ATCTCAAACGATGATCACGC+CGG 0.717654 1.3:-69781902 MS.gene49059:intron
TCTGGTGATGATCAGGATGG+TGG 0.726600 1.3:-69784638 MS.gene49059:CDS
TTATCTGGTGATGATCAGGA+TGG 0.778846 1.3:-69784641 MS.gene49059:CDS
AATCCAATATGTAACAACTG+TGG 0.783609 1.3:-69783993 MS.gene49059:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAACAAAAAGAAATAAAA+TGG + chr1.3:69781329-69781348 None:intergenic 10.0%
!!! AAACAAATATTTTATACTAA+AGG + chr1.3:69783402-69783421 None:intergenic 10.0%
!!! TTATTAATCTTTATTGTTTT+TGG - chr1.3:69780974-69780993 MS.gene49059:CDS 10.0%
!! ATCTGTCTAATTATATTAAA+AGG + chr1.3:69783519-69783538 None:intergenic 15.0%
!! GAATGCTATATAAAATATAA+TGG - chr1.3:69783469-69783488 MS.gene49059:CDS 15.0%
!!! TAATCTTATATCTTGTTTTA+TGG - chr1.3:69780950-69780969 MS.gene49059:CDS 15.0%
!!! TATAATTTATAATTAGCCTA+GGG - chr1.3:69783677-69783696 MS.gene49059:CDS 15.0%
!!! TTATAATTTATAATTAGCCT+AGG - chr1.3:69783676-69783695 MS.gene49059:CDS 15.0%
!!! TTTTAAAAGAAAATGAAACA+TGG + chr1.3:69781539-69781558 None:intergenic 15.0%
!!! TTTTTGTTATTAAACTAATG+TGG - chr1.3:69781338-69781357 MS.gene49059:intron 15.0%
!! AAAATAAACAAGTCAAATTC+TGG - chr1.3:69781472-69781491 MS.gene49059:CDS 20.0%
!! AATAGAATAAGGTTGAAATA+AGG - chr1.3:69783119-69783138 MS.gene49059:intron 20.0%
!! ACAAAATTTCCTATCAAAAT+CGG + chr1.3:69782498-69782517 None:intergenic 20.0%
!! CTAATTAAATGGTGTAAATT+TGG - chr1.3:69784027-69784046 MS.gene49059:CDS 20.0%
!! CTTGTTAACTACTAATTAAA+TGG - chr1.3:69784016-69784035 MS.gene49059:CDS 20.0%
!! TATGGATGAATTATTAAAGA+TGG - chr1.3:69782235-69782254 MS.gene49059:intron 20.0%
!! TGCTATATCTAAATAGAATA+AGG - chr1.3:69783108-69783127 MS.gene49059:intron 20.0%
!! TTTCATGATCTTTGATATTA+TGG + chr1.3:69781647-69781666 None:intergenic 20.0%
!!! AGTTTTTTTACTTGTTTACT+TGG - chr1.3:69783174-69783193 MS.gene49059:CDS 20.0%
!!! ATACTTTTCTTGAATAGAAT+CGG - chr1.3:69782607-69782626 MS.gene49059:intron 20.0%
!!! GTTTTTTTACTTGTTTACTT+GGG - chr1.3:69783175-69783194 MS.gene49059:CDS 20.0%
!!! TGCATGAAAATTTTAAATCT+TGG - chr1.3:69783323-69783342 MS.gene49059:intron 20.0%
! AAAATAAGTTGCATTGTTGT+AGG - chr1.3:69783771-69783790 MS.gene49059:CDS 25.0%
! ATATTGAATCAAGAAGAGTA+CGG - chr1.3:69782308-69782327 MS.gene49059:intron 25.0%
! ATTTAATCTTCACCTTCATT+TGG + chr1.3:69781515-69781534 None:intergenic 25.0%
! CGTATGTAAGATGTTTATAT+AGG + chr1.3:69783648-69783667 None:intergenic 25.0%
! GCTATAGAGATTTCATAAAT+AGG - chr1.3:69784474-69784493 MS.gene49059:intron 25.0%
! TGAAACTTCATATATCTGTT+TGG - chr1.3:69783280-69783299 MS.gene49059:intron 25.0%
! TTTAATCTTCACCTTCATTT+GGG + chr1.3:69781514-69781533 None:intergenic 25.0%
!! ACGTATGATTTGGATTTAAA+TGG + chr1.3:69784452-69784471 None:intergenic 25.0%
!! ATTTTGCATTGAACTAGAAA+AGG + chr1.3:69780902-69780921 None:intergenic 25.0%
!! GATGTGTTTTCTTCTTTTAA+TGG - chr1.3:69781371-69781390 MS.gene49059:intron 25.0%
!! TTTTCTACAGCAAAGAAAAA+TGG - chr1.3:69781068-69781087 MS.gene49059:CDS 25.0%
!! TTTTGCATTGAACTAGAAAA+GGG + chr1.3:69780901-69780920 None:intergenic 25.0%
!!! GTAATTTAACCGATTTTGAT+AGG - chr1.3:69782486-69782505 MS.gene49059:intron 25.0%
AAATTACAAAGAAGACCAAG+AGG + chr1.3:69782473-69782492 None:intergenic 30.0%
AAATTGATACAGATGTCAGA+AGG + chr1.3:69783609-69783628 None:intergenic 30.0%
AATCCAATATGTAACAACTG+TGG - chr1.3:69781855-69781874 MS.gene49059:intron 30.0%
CTATATCACTCAGAAAATGT+TGG + chr1.3:69782523-69782542 None:intergenic 30.0%
TAAAACTTACATTAGCACGA+AGG + chr1.3:69784424-69784443 None:intergenic 30.0%
TATAATTGCAACGAGTATGT+TGG - chr1.3:69783738-69783757 MS.gene49059:CDS 30.0%
TCAAATGGTACTTTACAGAA+AGG - chr1.3:69784853-69784872 MS.gene49059:intron 30.0%
TCAAGCTCTTGAATTTGATT+AGG + chr1.3:69781282-69781301 None:intergenic 30.0%
TCTATAGCTAACGTATGATT+TGG + chr1.3:69784462-69784481 None:intergenic 30.0%
TCTCATAAAACCAACTTACA+AGG + chr1.3:69784523-69784542 None:intergenic 30.0%
TTATCAAATACTCAACCTCT+TGG - chr1.3:69782455-69782474 MS.gene49059:intron 30.0%
TTATGAGATTGAGTTAGGAT+CGG - chr1.3:69784535-69784554 MS.gene49059:intron 30.0%
TTTGATCTTGAAGGATTATC+TGG - chr1.3:69781192-69781211 MS.gene49059:CDS 30.0%
! ACTGTTGATTATTACTATCC+CGG + chr1.3:69782399-69782418 None:intergenic 30.0%
! ATTAAACTAATGTGGTTCTG+TGG - chr1.3:69781346-69781365 MS.gene49059:intron 30.0%
! TACCAAAAAACTGATTTCTC+AGG + chr1.3:69783155-69783174 None:intergenic 30.0%
! TGTTTGTTAAGGCACATATA+CGG + chr1.3:69781962-69781981 None:intergenic 30.0%
! TTTTTAATGTCTTCGCAACA+AGG - chr1.3:69781592-69781611 MS.gene49059:CDS 30.0%
!! AAGAAATGGTGCTATACATT+TGG - chr1.3:69782704-69782723 MS.gene49059:intron 30.0%
!! ACAGTTGATAAGAAAGAAGA+TGG + chr1.3:69780925-69780944 None:intergenic 30.0%
!! TTGGATTTGATTTTGCATGT+TGG - chr1.3:69780993-69781012 MS.gene49059:CDS 30.0%
!!! ATGCATGTGATTTGTTTTAC+CGG + chr1.3:69783968-69783987 None:intergenic 30.0%
!!! CTTATTTCTGGTTTTGGATT+TGG - chr1.3:69783856-69783875 MS.gene49059:CDS 30.0%
!!! GGTTTTTTGTAGTTTCTTCA+AGG - chr1.3:69781392-69781411 MS.gene49059:intron 30.0%
!!! TGGTTTTATGAGATTGAGTT+AGG - chr1.3:69784530-69784549 MS.gene49059:intron 30.0%
AAACAATCCTCCTTGTAAGT+TGG - chr1.3:69784510-69784529 MS.gene49059:intron 35.0%
AAATGTTGACATAATGCCCT+AGG + chr1.3:69783696-69783715 None:intergenic 35.0%
AAGATCAAAGTTATCGCTTC+CGG + chr1.3:69781181-69781200 None:intergenic 35.0%
AATCAACAGTTTAGCACTTG+TGG - chr1.3:69782409-69782428 MS.gene49059:intron 35.0%
AATGGTACTTTACAGAAAGG+TGG - chr1.3:69784856-69784875 MS.gene49059:intron 35.0%
ACCAGATAAAACATCAAGGT+TGG + chr1.3:69782670-69782689 None:intergenic 35.0%
AGATAGTCCTGTTTGGATTA+AGG - chr1.3:69782265-69782284 MS.gene49059:intron 35.0%
AGCGATAACTTTGATCTTGA+AGG - chr1.3:69781183-69781202 MS.gene49059:CDS 35.0%
AGGAAAATGACAAGCTAAGA+GGG - chr1.3:69781802-69781821 MS.gene49059:intron 35.0%
AGTCTTCTACAGCTTATGAA+TGG + chr1.3:69782955-69782974 None:intergenic 35.0%
ATGAATGGTTGTGCATTAGA+AGG + chr1.3:69782940-69782959 None:intergenic 35.0%
ATGACATGAGAGTTATGACT+AGG - chr1.3:69784192-69784211 MS.gene49059:intron 35.0%
ATTACCATCAAAGTTTCTGC+AGG - chr1.3:69782556-69782575 MS.gene49059:intron 35.0%
CATAAAACCAACTTACAAGG+AGG + chr1.3:69784520-69784539 None:intergenic 35.0%
CCAAAACCAGAAATAAGCAA+CGG + chr1.3:69783853-69783872 None:intergenic 35.0%
CCTGCAAAAACAAAGATTCT+TGG + chr1.3:69784633-69784652 None:intergenic 35.0%
CTACAGCAAAGAAAAATGGA+GGG - chr1.3:69781072-69781091 MS.gene49059:CDS 35.0%
CTCATCCTGATGAAAAACAA+AGG - chr1.3:69781421-69781440 MS.gene49059:intron 35.0%
GAAGACTATTCACCAGAATT+TGG + chr1.3:69784921-69784940 None:intergenic 35.0%
GATAGTCCTGTTTGGATTAA+GGG - chr1.3:69782266-69782285 MS.gene49059:intron 35.0%
TACAGCAAAGAAAAATGGAG+GGG - chr1.3:69781073-69781092 MS.gene49059:CDS 35.0%
TAGCATGATGAAAGAAGCAA+TGG - chr1.3:69781830-69781849 MS.gene49059:intron 35.0%
TCAACATGCAAACAATAGTC+TGG + chr1.3:69784582-69784601 None:intergenic 35.0%
TCCTAGAGATTAGTGAATCA+AGG - chr1.3:69783240-69783259 MS.gene49059:intron 35.0%
TCCTGATGAAAAACAAAGGT+TGG - chr1.3:69781425-69781444 MS.gene49059:intron 35.0%
TCTACAGCAAAGAAAAATGG+AGG - chr1.3:69781071-69781090 MS.gene49059:CDS 35.0%
TGCTTCATCTGCTAGAAAAT+GGG - chr1.3:69784142-69784161 MS.gene49059:intron 35.0%
TGGAGAATCACAAACAAATG+CGG + chr1.3:69781627-69781646 None:intergenic 35.0%
TGGCAAACCAATATCATCAT+TGG - chr1.3:69781989-69782008 MS.gene49059:CDS 35.0%
TTCCACCAGATAAAACATCA+AGG + chr1.3:69782674-69782693 None:intergenic 35.0%
TTTGTTGAATCAGACTCAAC+TGG - chr1.3:69781752-69781771 MS.gene49059:CDS 35.0%
! AACCTTGATGTTTTATCTGG+TGG - chr1.3:69782669-69782688 MS.gene49059:intron 35.0%
! CGGTTGATTTCTTCTTGTAT+TGG - chr1.3:69782332-69782351 MS.gene49059:intron 35.0%
! GATGTTTTATCTGGTGGAAT+CGG - chr1.3:69782675-69782694 MS.gene49059:intron 35.0%
! GTTGATGTTTCTGTTGAGAT+TGG - chr1.3:69782907-69782926 MS.gene49059:CDS 35.0%
! TTGATTTTCTGCGTGATGAA+AGG - chr1.3:69784303-69784322 MS.gene49059:intron 35.0%
!! ATGATGATATTGGTTTGCCA+AGG + chr1.3:69781989-69782008 None:intergenic 35.0%
!! ATTGAGTTAGGATCGGTTTT+GGG - chr1.3:69784542-69784561 MS.gene49059:intron 35.0%
!! GGATTAGCCAATGATGATAT+TGG + chr1.3:69781999-69782018 None:intergenic 35.0%
!! TGTTGATTCTGCAAGAAACT+TGG - chr1.3:69784677-69784696 MS.gene49059:CDS 35.0%
!!! CCAAGAATCTTTGTTTTTGC+AGG - chr1.3:69784630-69784649 MS.gene49059:CDS 35.0%
!!! CTTTGTTTTTCATCAGGATG+AGG + chr1.3:69781423-69781442 None:intergenic 35.0%
!!! TCCAACCTTTGTTTTTCATC+AGG + chr1.3:69781429-69781448 None:intergenic 35.0%
!!! TGCCTGAGAAATCAGTTTTT+TGG - chr1.3:69783150-69783169 MS.gene49059:CDS 35.0%
AACAGTCTTTGTCGTGAAAC+TGG + chr1.3:69784284-69784303 None:intergenic 40.0%
AAGTTCCAGACCAGAATTTG+AGG + chr1.3:69782036-69782055 None:intergenic 40.0%
AATATTTGGCCAGGAATTGC+TGG + chr1.3:69781885-69781904 None:intergenic 40.0%
AATGTGAACCATCTCTTGCA+TGG + chr1.3:69784366-69784385 None:intergenic 40.0%
AATTGAAAACGCCCGTCTAA+AGG - chr1.3:69781926-69781945 MS.gene49059:CDS 40.0%
ACGTGTATTAGCACTTACCT+TGG + chr1.3:69783019-69783038 None:intergenic 40.0%
ACTGGTGATAGCTTAGATAC+TGG - chr1.3:69781114-69781133 MS.gene49059:CDS 40.0%
AGCACTTGTGGAAACTTTGA+TGG - chr1.3:69782421-69782440 MS.gene49059:intron 40.0%
AGTTCACCAATGGGATTGAT+GGG - chr1.3:69782155-69782174 MS.gene49059:intron 40.0%
ATGACCAACAACTTCTGTTC+TGG - chr1.3:69784113-69784132 MS.gene49059:intron 40.0%
ATGTGAACCATCTCTTGCAT+GGG + chr1.3:69784365-69784384 None:intergenic 40.0%
ATTGTGCAGGATATGCCAAA+TGG - chr1.3:69782988-69783007 MS.gene49059:CDS 40.0%
CAAACCTGCAGAAACTTTGA+TGG + chr1.3:69782563-69782582 None:intergenic 40.0%
CAGGAAAATGACAAGCTAAG+AGG - chr1.3:69781801-69781820 MS.gene49059:intron 40.0%
CCAATATGTAACAACTGTGG+TGG - chr1.3:69781858-69781877 MS.gene49059:intron 40.0%
CCACCACAGTTGTTACATAT+TGG + chr1.3:69781861-69781880 None:intergenic 40.0%
CCTGGTATTAGTTCACCAAT+GGG - chr1.3:69782146-69782165 MS.gene49059:intron 40.0%
CTATAATCTGCCAAGTGTGT+CGG - chr1.3:69783570-69783589 MS.gene49059:CDS 40.0%
CTCAACAGAAACATCAACCA+CGG + chr1.3:69782905-69782924 None:intergenic 40.0%
CTTACCTTGGAGTAACCATT+TGG + chr1.3:69783006-69783025 None:intergenic 40.0%
GATTCTGCAAGAAACTTGGA+TGG - chr1.3:69784681-69784700 MS.gene49059:CDS 40.0%
GCAATTTCAGATGCATACTG+AGG - chr1.3:69782798-69782817 MS.gene49059:intron 40.0%
GCCTTAACAAACAAGTTCCT+TGG - chr1.3:69781969-69781988 MS.gene49059:CDS 40.0%
GCCTTGATTCACTAATCTCT+AGG + chr1.3:69783244-69783263 None:intergenic 40.0%
GGAAAATGACAAGCTAAGAG+GGG - chr1.3:69781803-69781822 MS.gene49059:intron 40.0%
GGCATGAGAACATAATGCTT+AGG - chr1.3:69781778-69781797 MS.gene49059:CDS 40.0%
GGTGCTCTTCGAACAATATT+TGG + chr1.3:69781899-69781918 None:intergenic 40.0%
GGTTCAATTCGTCCTTTAGA+CGG + chr1.3:69781941-69781960 None:intergenic 40.0%
GTGCTTCATCTGCTAGAAAA+TGG - chr1.3:69784141-69784160 MS.gene49059:intron 40.0%
GTTCAATTCGTCCTTTAGAC+GGG + chr1.3:69781940-69781959 None:intergenic 40.0%
GTTTGGATTAAGGGTTTGGA+TGG - chr1.3:69782275-69782294 MS.gene49059:intron 40.0%
TACAGATGTCAGAAGGATAG+AGG + chr1.3:69783602-69783621 None:intergenic 40.0%
TAGTAAGCTCTTGCAAACCA+AGG + chr1.3:69782771-69782790 None:intergenic 40.0%
TAGTTCACCAATGGGATTGA+TGG - chr1.3:69782154-69782173 MS.gene49059:intron 40.0%
TATAATCTGCCAAGTGTGTC+GGG - chr1.3:69783571-69783590 MS.gene49059:CDS 40.0%
TATCGTCCGTTGCTTATTTC+TGG - chr1.3:69783844-69783863 MS.gene49059:CDS 40.0%
TATGCCAAATGGTTACTCCA+AGG - chr1.3:69782999-69783018 MS.gene49059:CDS 40.0%
TCCAAACCCTTAATCCAAAC+AGG + chr1.3:69782275-69782294 None:intergenic 40.0%
TCCTGTTTGGATTAAGGGTT+TGG - chr1.3:69782271-69782290 MS.gene49059:intron 40.0%
TCTTCGAACAATATTTGGCC+AGG + chr1.3:69781894-69781913 None:intergenic 40.0%
TGAATCAGACTCAACTGGAA+AGG - chr1.3:69781757-69781776 MS.gene49059:CDS 40.0%
TGACCAACAACTTCTGTTCT+GGG - chr1.3:69784114-69784133 MS.gene49059:intron 40.0%
TGAGAACATAATGCTTAGGC+AGG - chr1.3:69781782-69781801 MS.gene49059:CDS 40.0%
TGATGTTCAGCTTGAGAGAT+CGG - chr1.3:69782187-69782206 MS.gene49059:intron 40.0%
TTCACATTGCCAAAGGTCAA+GGG - chr1.3:69784378-69784397 MS.gene49059:CDS 40.0%
TTCGTCAAGTGAGAATCCTT+CGG - chr1.3:69782848-69782867 MS.gene49059:intron 40.0%
TTGCATTGTTGTAGGTCACT+TGG - chr1.3:69783779-69783798 MS.gene49059:CDS 40.0%
TTGGATCTTAGCAAGAGACT+TGG - chr1.3:69781444-69781463 MS.gene49059:CDS 40.0%
TTGGATGGATACATCTTGCT+CGG - chr1.3:69784696-69784715 MS.gene49059:CDS 40.0%
! AAACTTTGATGGATGCGGTA+TGG - chr1.3:69782432-69782451 MS.gene49059:intron 40.0%
! AAGTTTGCTTCAATGTGCCT+TGG - chr1.3:69782751-69782770 MS.gene49059:intron 40.0%
! AGGATTATCTGGTGATGATC+AGG - chr1.3:69781203-69781222 MS.gene49059:intron 40.0%
! ATCATCATTGGCTAATCCCA+TGG - chr1.3:69782001-69782020 MS.gene49059:CDS 40.0%
! ATCATCGTTTGAGATGGAAG+AGG + chr1.3:69783941-69783960 None:intergenic 40.0%
! GAACTTGGTATTGGAAGGAA+CGG - chr1.3:69782050-69782069 MS.gene49059:CDS 40.0%
! GAGTGGGACATTTTGTCTAA+TGG - chr1.3:69784335-69784354 MS.gene49059:intron 40.0%
! GCCAACCTTGATGTTTTATC+TGG - chr1.3:69782666-69782685 MS.gene49059:intron 40.0%
! GCCAAGGAACTTGTTTGTTA+AGG + chr1.3:69781973-69781992 None:intergenic 40.0%
! GGCTCTAATAGATCTTGCAT+TGG - chr1.3:69782208-69782227 MS.gene49059:intron 40.0%
! GGGCGTTTTCAATTCTAATC+TGG + chr1.3:69781920-69781939 None:intergenic 40.0%
! TAGAAGAAGCATGTTGAAGC+TGG - chr1.3:69784082-69784101 MS.gene49059:CDS 40.0%
! TCAAATTCTGGTCTGGAACT+TGG - chr1.3:69782035-69782054 MS.gene49059:CDS 40.0%
! TCATTGAATGTGGTGATGAG+TGG - chr1.3:69784748-69784767 MS.gene49059:CDS 40.0%
! TCTTAGCAAGAGACTTGGTT+TGG - chr1.3:69781449-69781468 MS.gene49059:CDS 40.0%
! TGAATCAAGAAGAGTACGGA+CGG - chr1.3:69782312-69782331 MS.gene49059:intron 40.0%
! TGCAGCTTTGATCTTCTGAA+TGG + chr1.3:69785001-69785020 None:intergenic 40.0%
! TGGGACATTTTGTCTAATGG+TGG - chr1.3:69784338-69784357 MS.gene49059:intron 40.0%
! TGTGGAAACTTTGATGGATG+CGG - chr1.3:69782427-69782446 MS.gene49059:intron 40.0%
! TTATCTGGTGATGATCAGGA+TGG - chr1.3:69781207-69781226 MS.gene49059:intron 40.0%
! TTTGATTAGGAGTGTGTCTG+TGG + chr1.3:69781269-69781288 None:intergenic 40.0%
!! AGGAAAAATGTTGATGACCC+TGG - chr1.3:69784212-69784231 MS.gene49059:intron 40.0%
!! ATCTCTAGGAGTACTAGAAG+TGG + chr1.3:69783230-69783249 None:intergenic 40.0%
!! GATTGAGTTAGGATCGGTTT+TGG - chr1.3:69784541-69784560 MS.gene49059:intron 40.0%
!! TTGGTTTGCAAGAGCTTACT+AGG - chr1.3:69782770-69782789 MS.gene49059:intron 40.0%
!!! CCGTTGCTTATTTCTGGTTT+TGG - chr1.3:69783850-69783869 MS.gene49059:CDS 40.0%
AAAATGGGACAGCCTCCAAA+TGG - chr1.3:69784157-69784176 MS.gene49059:intron 45.0%
AAATGGGACAGCCTCCAAAT+GGG - chr1.3:69784158-69784177 MS.gene49059:intron 45.0%
AACCCCAGAACAGAAGTTGT+TGG + chr1.3:69784120-69784139 None:intergenic 45.0%
ACATGCTTCTTCTACCAGCT+TGG + chr1.3:69784076-69784095 None:intergenic 45.0%
ACCATCCTCAAATTCTGGTC+TGG - chr1.3:69782028-69782047 MS.gene49059:CDS 45.0%
ACTTTACAGAAAGGTGGTGC+TGG - chr1.3:69784862-69784881 MS.gene49059:intron 45.0%
AGATCAAGTCCCATTGGCAA+AGG + chr1.3:69782107-69782126 None:intergenic 45.0%
AGCTGTAGAAGACTTCCTTC+TGG - chr1.3:69782961-69782980 MS.gene49059:CDS 45.0%
AGGATTCTCACTTGACGAAC+CGG + chr1.3:69782847-69782866 None:intergenic 45.0%
ATCTCAAACGATGATCACGC+CGG - chr1.3:69783946-69783965 MS.gene49059:CDS 45.0%
ATGAAAGGCTTAGAAGCGAG+TGG - chr1.3:69784318-69784337 MS.gene49059:intron 45.0%
ATTGCTTTCACCACTAGTCC+CGG - chr1.3:69782825-69782844 MS.gene49059:intron 45.0%
ATTTGAGGATGGTAGAGCCA+TGG + chr1.3:69782021-69782040 None:intergenic 45.0%
CACAGTCGGATTCCAAATTC+TGG - chr1.3:69784906-69784925 MS.gene49059:intron 45.0%
CCCATTGGTGAACTAATACC+AGG + chr1.3:69782149-69782168 None:intergenic 45.0%
CTACTTCCCATCAATCCCAT+TGG + chr1.3:69782164-69782183 None:intergenic 45.0%
CTCAGACAGATAGTCCTGTT+TGG - chr1.3:69782258-69782277 MS.gene49059:intron 45.0%
GAACTGGATCCAGGTCATAT+TGG + chr1.3:69783441-69783460 None:intergenic 45.0%
GAATCGTCGAACCCAAATGA+AGG - chr1.3:69781500-69781519 MS.gene49059:CDS 45.0%
GACAAGTCTTGCAACCTTAC+AGG + chr1.3:69780863-69780882 None:intergenic 45.0%
GACCAACAACTTCTGTTCTG+GGG - chr1.3:69784115-69784134 MS.gene49059:intron 45.0%
GAGAGGATGAGTATGAAAGC+CGG - chr1.3:69781154-69781173 MS.gene49059:CDS 45.0%
GAGATGGTTCACATTGCCAA+AGG - chr1.3:69784371-69784390 MS.gene49059:CDS 45.0%
GAGTGTGAACAGTTCCTGTA+AGG - chr1.3:69780846-69780865 MS.gene49059:CDS 45.0%
GCCTGGTATTAGTTCACCAA+TGG - chr1.3:69782145-69782164 MS.gene49059:intron 45.0%
GCTCTACCATCCTCAAATTC+TGG - chr1.3:69782023-69782042 MS.gene49059:CDS 45.0%
GGAACAATTGCAAAGCCTGA+AGG + chr1.3:69784802-69784821 None:intergenic 45.0%
GGAATCGGTGGAACAAGAAA+TGG - chr1.3:69782690-69782709 MS.gene49059:intron 45.0%
GGCTTTGCAATTGTTCCTGA+TGG - chr1.3:69784805-69784824 MS.gene49059:intron 45.0%
GTTCACATTGCCAAAGGTCA+AGG - chr1.3:69784377-69784396 MS.gene49059:CDS 45.0%
TAAGCAACGGACGATAGAGT+TGG + chr1.3:69783840-69783859 None:intergenic 45.0%
TATGTTGCACTCTTGCCTTC+AGG - chr1.3:69784784-69784803 MS.gene49059:intron 45.0%
TCCAGACCAGAATTTGAGGA+TGG + chr1.3:69782032-69782051 None:intergenic 45.0%
TGAAAGGCTTAGAAGCGAGT+GGG - chr1.3:69784319-69784338 MS.gene49059:intron 45.0%
TGTACGAGACCAATATGACC+TGG - chr1.3:69783429-69783448 MS.gene49059:CDS 45.0%
TTAGCGCTGCAACATCTGTT+TGG - chr1.3:69784255-69784274 MS.gene49059:intron 45.0%
TTCAATGATTGCCCGTCAAC+TGG + chr1.3:69784736-69784755 None:intergenic 45.0%
TTCTGTAAGCAGCATGCAGA+AGG - chr1.3:69782871-69782890 MS.gene49059:CDS 45.0%
TTGAGATGGAAGAGGACATG+AGG + chr1.3:69783933-69783952 None:intergenic 45.0%
TTGCCAATGGGACTTGATCT+CGG - chr1.3:69782107-69782126 MS.gene49059:intron 45.0%
TTGGATTTGGCGCTCATAGA+TGG - chr1.3:69783869-69783888 MS.gene49059:CDS 45.0%
TTTGAGGATGGTAGAGCCAT+GGG + chr1.3:69782020-69782039 None:intergenic 45.0%
! AACTGACTCCATTGTGAGCT+TGG + chr1.3:69784950-69784969 None:intergenic 45.0%
! AGCTTAGATACTGGTCTGCT+TGG - chr1.3:69781123-69781142 MS.gene49059:CDS 45.0%
! GCTTAGATACTGGTCTGCTT+GGG - chr1.3:69781124-69781143 MS.gene49059:CDS 45.0%
! GTCTGGAACTTGGTATTGGA+AGG - chr1.3:69782045-69782064 MS.gene49059:CDS 45.0%
! GTTTTATCTGGTGGAATCGG+TGG - chr1.3:69782678-69782697 MS.gene49059:intron 45.0%
! TCATTTGGGTTCGACGATTC+TGG + chr1.3:69781500-69781519 None:intergenic 45.0%
! TCTGGTCTGGAACTTGGTAT+TGG - chr1.3:69782041-69782060 MS.gene49059:CDS 45.0%
! TGACGGGCAATCATTGAATG+TGG - chr1.3:69784738-69784757 MS.gene49059:CDS 45.0%
! TGTATTGGTCCTAAACCTGC+TGG - chr1.3:69782347-69782366 MS.gene49059:intron 45.0%
! TTGAATGTGGTGATGAGTGG+TGG - chr1.3:69784751-69784770 MS.gene49059:CDS 45.0%
!! AGATCTTGCATTGGCTGCTA+TGG - chr1.3:69782217-69782236 MS.gene49059:intron 45.0%
!! ATTGGAAGGAACGGTTTTGG+TGG - chr1.3:69782059-69782078 MS.gene49059:intron 45.0%
!! GGTATTGGAAGGAACGGTTT+TGG - chr1.3:69782056-69782075 MS.gene49059:CDS 45.0%
AATGGGACAGCCTCCAAATG+GGG - chr1.3:69784159-69784178 MS.gene49059:intron 50.0%
AGGTCACTTGGATTGAGCAC+TGG - chr1.3:69783791-69783810 MS.gene49059:CDS 50.0%
ATGGGACTTGATCTCGGAGA+TGG - chr1.3:69782113-69782132 MS.gene49059:intron 50.0%
ATTGCCAAAGGTCAAGGGCA+AGG - chr1.3:69784383-69784402 MS.gene49059:CDS 50.0%
ATTTGACATGCCGTAGCCAG+AGG + chr1.3:69784839-69784858 None:intergenic 50.0%
CAAAGTTATCGCTTCCGGAC+CGG + chr1.3:69781176-69781195 None:intergenic 50.0%
CATCACTCAGAGTCCCCATT+TGG + chr1.3:69784175-69784194 None:intergenic 50.0%
CATTGGCAAAGGATTGCCGA+GGG + chr1.3:69782096-69782115 None:intergenic 50.0%
CGATCTGAGTTGCGGCATTA+AGG - chr1.3:69781569-69781588 MS.gene49059:CDS 50.0%
CGCAACTCAGATCGTGATTG+CGG + chr1.3:69781563-69781582 None:intergenic 50.0%
CGCAATCACGATCTGAGTTG+CGG - chr1.3:69781561-69781580 MS.gene49059:CDS 50.0%
CTCGGCAATCCTTTGCCAAT+GGG - chr1.3:69782095-69782114 MS.gene49059:intron 50.0%
CTGAAGCTACGAGAGAAACC+GGG - chr1.3:69782378-69782397 MS.gene49059:intron 50.0%
GATGAGTATGAAAGCCGGTC+CGG - chr1.3:69781159-69781178 MS.gene49059:CDS 50.0%
GATGGATACATCTTGCTCGG+TGG - chr1.3:69784699-69784718 MS.gene49059:CDS 50.0%
GCAACAAAGCCAGCAGGTTT+AGG + chr1.3:69782359-69782378 None:intergenic 50.0%
GCTGAAGCTACGAGAGAAAC+CGG - chr1.3:69782377-69782396 MS.gene49059:intron 50.0%
GGATTCTCACTTGACGAACC+GGG + chr1.3:69782846-69782865 None:intergenic 50.0%
GGCGTGATCATCGTTTGAGA+TGG + chr1.3:69783947-69783966 None:intergenic 50.0%
GGTCACTTGGATTGAGCACT+GGG - chr1.3:69783792-69783811 MS.gene49059:CDS 50.0%
GTGGTGTATGCACCAGTTGA+CGG - chr1.3:69784721-69784740 MS.gene49059:CDS 50.0%
GTTTCCTTGCCCTTGACCTT+TGG + chr1.3:69784390-69784409 None:intergenic 50.0%
TAGCATTCGCAGCAGAGAAC+TGG + chr1.3:69783457-69783476 None:intergenic 50.0%
TCCAACTGCCAAGCTCACAA+TGG - chr1.3:69784939-69784958 MS.gene49059:CDS 50.0%
TCCATTGTGAGCTTGGCAGT+TGG + chr1.3:69784943-69784962 None:intergenic 50.0%
TCCTGCACAATACAGCCAGA+AGG + chr1.3:69782979-69782998 None:intergenic 50.0%
TCTCCGAGATCAAGTCCCAT+TGG + chr1.3:69782113-69782132 None:intergenic 50.0%
TCTGCTTGGGAGAATGAGAG+AGG - chr1.3:69781137-69781156 MS.gene49059:CDS 50.0%
TCTGGCTACGGCATGTCAAA+TGG - chr1.3:69784838-69784857 MS.gene49059:intron 50.0%
TGGTGTATGCACCAGTTGAC+GGG - chr1.3:69784722-69784741 MS.gene49059:CDS 50.0%
TTTGACATGCCGTAGCCAGA+GGG + chr1.3:69784838-69784857 None:intergenic 50.0%
! AGCAGCATGCAGAAGGTGTA+TGG - chr1.3:69782878-69782897 MS.gene49059:CDS 50.0%
! CATGCTGCTTACAGAACCGA+AGG + chr1.3:69782867-69782886 None:intergenic 50.0%
! GATCAGGATGGTGGTGATGA+TGG - chr1.3:69781219-69781238 MS.gene49059:intron 50.0%
! GCAGCATGCAGAAGGTGTAT+GGG - chr1.3:69782879-69782898 MS.gene49059:CDS 50.0%
! GGTGGAAGTTTGCTCACAGT+CGG - chr1.3:69784892-69784911 MS.gene49059:intron 50.0%
! TCCTTCTGGCTGTATTGTGC+AGG - chr1.3:69782975-69782994 MS.gene49059:CDS 50.0%
! TCTGGTGATGATCAGGATGG+TGG - chr1.3:69781210-69781229 MS.gene49059:intron 50.0%
! TTTGCAGCATTGAGCCAAGC+TGG - chr1.3:69784059-69784078 MS.gene49059:CDS 50.0%
!! CAGAGTGAGATTGGTCTCAC+TGG - chr1.3:69781096-69781115 MS.gene49059:CDS 50.0%
ACCCTCCAAAGGCAGTGTGA+AGG - chr1.3:69783898-69783917 MS.gene49059:CDS 55.0%
ACTTGACGAACCGGGACTAG+TGG + chr1.3:69782838-69782857 None:intergenic 55.0%
AGCCTTCACACTGCCTTTGG+AGG + chr1.3:69783903-69783922 None:intergenic 55.0%
ATGGAGGGGCAGAGTGAGAT+TGG - chr1.3:69781087-69781106 MS.gene49059:CDS 55.0%
CACTCAGAGTCCCCATTTGG+AGG + chr1.3:69784172-69784191 None:intergenic 55.0%
CCAAAGGCAGTGTGAAGGCT+TGG - chr1.3:69783903-69783922 MS.gene49059:CDS 55.0%
CCAAGCCTTCACACTGCCTT+TGG + chr1.3:69783906-69783925 None:intergenic 55.0%
CCATTGGCAAAGGATTGCCG+AGG + chr1.3:69782097-69782116 None:intergenic 55.0%
CCTCGGCAATCCTTTGCCAA+TGG - chr1.3:69782094-69782113 MS.gene49059:intron 55.0%
GAGGTGAATCCCGACACACT+TGG + chr1.3:69783583-69783602 None:intergenic 55.0%
GCCTTCACACTGCCTTTGGA+GGG + chr1.3:69783902-69783921 None:intergenic 55.0%
GCTTCAGCAACAAAGCCAGC+AGG + chr1.3:69782365-69782384 None:intergenic 55.0%
TGCAGCGCTAAGCACGATAC+CGG + chr1.3:69784246-69784265 None:intergenic 55.0%
! GGATACATCTTGCTCGGTGG+TGG - chr1.3:69784702-69784721 MS.gene49059:CDS 55.0%
! TGGTGGACCCATGCAAGAGA+TGG - chr1.3:69784355-69784374 MS.gene49059:CDS 55.0%
! TTCACACTGCCTTTGGAGGG+TGG + chr1.3:69783899-69783918 None:intergenic 55.0%
!! GGAAGGAACGGTTTTGGTGG+TGG - chr1.3:69782062-69782081 MS.gene49059:intron 55.0%
!! GTGATGATGGTCAGCGCAAG+AGG - chr1.3:69781232-69781251 MS.gene49059:intron 55.0%
!! TGTGGTGGACCAGCAATTCC+TGG - chr1.3:69781873-69781892 MS.gene49059:intron 55.0%
CGCAGCAGAGAACTGGATCC+AGG + chr1.3:69783450-69783469 None:intergenic 60.0%
GATGGATCGCCACCCTCCAA+AGG - chr1.3:69783887-69783906 MS.gene49059:CDS 60.0%
GCAGCGCTAAGCACGATACC+GGG + chr1.3:69784245-69784264 None:intergenic 60.0%
GGAGATGGTCGCTCAATGCC+TGG - chr1.3:69782128-69782147 MS.gene49059:intron 60.0%
! GGTGGTGGTTCAAGCTCCCT+CGG - chr1.3:69782077-69782096 MS.gene49059:intron 60.0%
! TGCAGAAGGTGTATGGGCCG+TGG - chr1.3:69782885-69782904 MS.gene49059:CDS 60.0%
!! AAAGGTGGTGCTGGCGATGG+TGG - chr1.3:69784871-69784890 MS.gene49059:intron 60.0%
!! CAGAAAGGTGGTGCTGGCGA+TGG - chr1.3:69784868-69784887 MS.gene49059:intron 60.0%
GCGCTAAGCACGATACCGGG+AGG + chr1.3:69784242-69784261 None:intergenic 65.0%
ACGATACCGGGAGGCTCGCC+AGG + chr1.3:69784233-69784252 None:intergenic 70.0%
CGATACCGGGAGGCTCGCCA+GGG + chr1.3:69784232-69784251 None:intergenic 70.0%
GATGACCCTGGCGAGCCTCC+CGG - chr1.3:69784224-69784243 MS.gene49059:intron 70.0%
!! GGTGGTGCTGGCGATGGTGG+TGG - chr1.3:69784874-69784893 MS.gene49059:intron 70.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 69780835 69785035 69780835 ID=MS.gene49059
chr1.3 mRNA 69780835 69785035 69780835 ID=MS.gene49059.t1;Parent=MS.gene49059
chr1.3 exon 69784928 69785035 69784928 ID=MS.gene49059.t1.exon1;Parent=MS.gene49059.t1
chr1.3 CDS 69784928 69785035 69784928 ID=cds.MS.gene49059.t1;Parent=MS.gene49059.t1
chr1.3 exon 69784566 69784792 69784566 ID=MS.gene49059.t1.exon2;Parent=MS.gene49059.t1
chr1.3 CDS 69784566 69784792 69784566 ID=cds.MS.gene49059.t1;Parent=MS.gene49059.t1
chr1.3 exon 69784349 69784466 69784349 ID=MS.gene49059.t1.exon3;Parent=MS.gene49059.t1
chr1.3 CDS 69784349 69784466 69784349 ID=cds.MS.gene49059.t1;Parent=MS.gene49059.t1
chr1.3 exon 69783422 69784105 69783422 ID=MS.gene49059.t1.exon4;Parent=MS.gene49059.t1
chr1.3 CDS 69783422 69784105 69783422 ID=cds.MS.gene49059.t1;Parent=MS.gene49059.t1
chr1.3 exon 69783145 69783246 69783145 ID=MS.gene49059.t1.exon5;Parent=MS.gene49059.t1
chr1.3 CDS 69783145 69783246 69783145 ID=cds.MS.gene49059.t1;Parent=MS.gene49059.t1
chr1.3 exon 69782850 69783062 69782850 ID=MS.gene49059.t1.exon6;Parent=MS.gene49059.t1
chr1.3 CDS 69782850 69783062 69782850 ID=cds.MS.gene49059.t1;Parent=MS.gene49059.t1
chr1.3 exon 69781903 69782077 69781903 ID=MS.gene49059.t1.exon7;Parent=MS.gene49059.t1
chr1.3 CDS 69781903 69782077 69781903 ID=cds.MS.gene49059.t1;Parent=MS.gene49059.t1
chr1.3 exon 69781437 69781804 69781437 ID=MS.gene49059.t1.exon8;Parent=MS.gene49059.t1
chr1.3 CDS 69781437 69781804 69781437 ID=cds.MS.gene49059.t1;Parent=MS.gene49059.t1
chr1.3 exon 69780835 69781218 69780835 ID=MS.gene49059.t1.exon9;Parent=MS.gene49059.t1
chr1.3 CDS 69780835 69781218 69780835 ID=cds.MS.gene49059.t1;Parent=MS.gene49059.t1
Gene Sequence

>MS.gene49059

ATGGGGTTTGAGAGTGTGAACAGTTCCTGTAAGGTTGCAAGACTTGTCACTGATATTTCTATACCCTTTTCTAGTTCAATGCAAAATCCATCTTCTTTCTTATCAACTGTATGCTTAATCTTATATCTTGTTTTATGGTTTATTAATCTTTATTGTTTTTGGATTTGATTTTGCATGTTGGTTATTTAATTATTCATTCATTCATTATTCTTTTGTTATTGCTGATGAGACTATTTTCTACAGCAAAGAAAAATGGAGGGGCAGAGTGAGATTGGTCTCACTGGTGATAGCTTAGATACTGGTCTGCTTGGGAGAATGAGAGAGGATGAGTATGAAAGCCGGTCCGGAAGCGATAACTTTGATCTTGAAGGATTATCTGGTGATGATCAGGATGGTGGTGATGATGGTCAGCGCAAGAGGAAGAAGAGATACCACAGACACACTCCTAATCAAATTCAAGAGCTTGAATCGTATGTTTTATCAATTTCTTGCCATTTTATTTCTTTTTGTTATTAAACTAATGTGGTTCTGTGGTTGATGTGTTTTCTTCTTTTAATGGTTTTTTGTAGTTTCTTCAAGGAGTGTCCTCATCCTGATGAAAAACAAAGGTTGGATCTTAGCAAGAGACTTGGTTTGGAAAATAAACAAGTCAAATTCTGGTTCCAGAATCGTCGAACCCAAATGAAGGTGAAGATTAAATACCATGTTTCATTTTCTTTTAAAATCCGCAATCACGATCTGAGTTGCGGCATTAAGGTTTTTAATGTCTTCGCAACAAGGCTGCTTAAGCCGCATTTGTTTGTGATTCTCCATAATATCAAAGATCATGAAAGCGATTTAAAAACTTGTTAAACACAACAGTTATTGCATTTGTATTAATAGAGATATTGTAATTTGTAACAATTAGCTGATTTGTTTTTGTTGAATCAGACTCAACTGGAAAGGCATGAGAACATAATGCTTAGGCAGGAAAATGACAAGCTAAGAGGGGAGAATAGCATGATGAAAGAAGCAATGGTGAATCCAATATGTAACAACTGTGGTGGACCAGCAATTCCTGGCCAAATATTGTTCGAAGAGCACCAGATTAGAATTGAAAACGCCCGTCTAAAGGACGAATTGAACCGTATATGTGCCTTAACAAACAAGTTCCTTGGCAAACCAATATCATCATTGGCTAATCCCATGGCTCTACCATCCTCAAATTCTGGTCTGGAACTTGGTATTGGAAGGAACGGTTTTGGTGGTGGTTCAAGCTCCCTCGGCAATCCTTTGCCAATGGGACTTGATCTCGGAGATGGTCGCTCAATGCCTGGTATTAGTTCACCAATGGGATTGATGGGAAGTAGTAGTGATGTTCAGCTTGAGAGATCGGCTCTAATAGATCTTGCATTGGCTGCTATGGATGAATTATTAAAGATGGCTCAGACAGATAGTCCTGTTTGGATTAAGGGTTTGGATGGAGAGAGAGACATATTGAATCAAGAAGAGTACGGACGGTTGATTTCTTCTTGTATTGGTCCTAAACCTGCTGGCTTTGTTGCTGAAGCTACGAGAGAAACCGGGATAGTAATAATCAACAGTTTAGCACTTGTGGAAACTTTGATGGATGCGGTATGGTTATCAAATACTCAACCTCTTGGTCTTCTTTGTAATTTAACCGATTTTGATAGGAAATTTTGTAGCCAACATTTTCTGAGTGATATAGTTTTTGTTTTTTAATTACCATCAAAGTTTCTGCAGGTTTGTTTAGTATATTGTTTTAATTGATTATACTTTTCTTGAATAGAATCGGTACGCAGATATGTTTCAGTCTATGATTGCTAGATCTGCCAACCTTGATGTTTTATCTGGTGGAATCGGTGGAACAAGAAATGGTGCTATACATTTGGTACGTTTTTTTCGTTGCTGTATATAAGTTTGCTTCAATGTGCCTTGGTTTGCAAGAGCTTACTAGGATTATGCAATTTCAGATGCATACTGAGGTTCAATTGCTTTCACCACTAGTCCCGGTTCGTCAAGTGAGAATCCTTCGGTTCTGTAAGCAGCATGCAGAAGGTGTATGGGCCGTGGTTGATGTTTCTGTTGAGATTGGTCATGATCCTTCTAATGCACAACCATTCATAAGCTGTAGAAGACTTCCTTCTGGCTGTATTGTGCAGGATATGCCAAATGGTTACTCCAAGGTAAGTGCTAATACACGTTTTTTTTTTTCTCTCTTTCTTTTATCTTGCGTTTTTTTGTACTTTGAAGTGTGTTTTCTATATAGAGACTGCTATATCTAAATAGAATAAGGTTGAAATAAGGTTGAAATTTGCCTGAGAAATCAGTTTTTTGGTAGTTTTTTTACTTGTTTACTTGGGAAGATGCTTATTGTCTGTACTTAGATTGTCCACTTCTAGTACTCCTAGAGATTAGTGAATCAAGGCTTATATTGTTTAGCTTTGAAACTTCATATATCTGTTTGGCATCTTTTAGTATTTAAAACTGCATGAAAATTTTAAATCTTGGATTTTTCAATCTTTGTTGTATAAACAATACAGTTGATGCTTCTATTCTTGTCTCCTTTAGTATAAAATATTTGTTTTTTACTGTGTACGAGACCAATATGACCTGGATCCAGTTCTCTGCTGCGAATGCTATATAAAATATAATGGAGACATGTGTTGTGTTAATCTGTGCCTTTTAATATAATTAGACAGATTTTATAATTTACTATAATAATTATGAAAATTCTATAATCTGCCAAGTGTGTCGGGATTCACCTCTATCCTTCTGACATCTGTATCAATTTTGTATTTAAACTCAATCCTATATAAACATCTTACATACGTTATTAATTTATAATTTATAATTAGCCTAGGGCATTATGTCAACATTTTCTGAAATAGTTAATATTTCTGTATAATTGCAACGAGTATGTTGGATAATAACAGAAAATAAGTTGCATTGTTGTAGGTCACTTGGATTGAGCACTGGGAGTATGATGAGAGTGTTGTTCACCAACTCTATCGTCCGTTGCTTATTTCTGGTTTTGGATTTGGCGCTCATAGATGGATCGCCACCCTCCAAAGGCAGTGTGAAGGCTTGGCTATCCTCATGTCCTCTTCCATCTCAAACGATGATCACGCCGGTAAAACAAATCACATGCATGAATTTAAATCGTTATATTTTCTAATCACTTGTTAACTACTAATTAAATGGTGTAAATTTGGCATTTTGATTTTGCAGCATTGAGCCAAGCTGGTAGAAGAAGCATGTTGAAGCTGGCACAACGTATGACCAACAACTTCTGTTCTGGGGTTTGTGCTTCATCTGCTAGAAAATGGGACAGCCTCCAAATGGGGACTCTGAGTGATGACATGAGAGTTATGACTAGGAAAAATGTTGATGACCCTGGCGAGCCTCCCGGTATCGTGCTTAGCGCTGCAACATCTGTTTGGATGCCAGTTTCACGACAAAGACTGTTTGATTTTCTGCGTGATGAAAGGCTTAGAAGCGAGTGGGACATTTTGTCTAATGGTGGACCCATGCAAGAGATGGTTCACATTGCCAAAGGTCAAGGGCAAGGAAACTGCGTTTCTCTCCTTCGTGCTAATGTAAGTTTTACTTATCCATTTAAATCCAAATCATACGTTAGCTATAGAGATTTCATAAATAGGACTTATAAAGCTTAAACAATCCTCCTTGTAAGTTGGTTTTATGAGATTGAGTTAGGATCGGTTTTGGGTGATTGAGTTAGCGCCAGACTATTGTTTGCATGTTGATTTCATATGAATATGAATACATCTAAAACCAAGAATCTTTGTTTTTGCAGGCTGTTAATGCGAATGATAGCAGCATGTTGATTCTGCAAGAAACTTGGATGGATACATCTTGCTCGGTGGTGGTGTATGCACCAGTTGACGGGCAATCATTGAATGTGGTGATGAGTGGTGGAGATTCTGCATATGTTGCACTCTTGCCTTCAGGCTTTGCAATTGTTCCTGATGGTAATGATCCCTCTGGCTACGGCATGTCAAATGGTACTTTACAGAAAGGTGGTGCTGGCGATGGTGGTGGAAGTTTGCTCACAGTCGGATTCCAAATTCTGGTGAATAGTCTTCCAACTGCCAAGCTCACAATGGAGTCAGTTGATACTGTGAATAATCTCATCTCATGCACCATTCAGAAGATCAAAGCTGCACTTAGAGTTGCATAA
Protein sequence

>MS.gene49059.t1

MGFESVNSSCKVARLVTDISIPFSSSMQNPSSFLSTQRKMEGQSEIGLTGDSLDTGLLGRMREDEYESRSGSDNFDLEGLSGDDQDGGDDGQRKRKKRYHRHTPNQIQELESFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENDKLRGENSMMKEAMVNPICNNCGGPAIPGQILFEEHQIRIENARLKDELNRICALTNKFLGKPISSLANPMALPSSNSGLELGIGRNGFGGGSSSLGNPLPMGLDLGDGRSMPGISSPMGLMGSSSDVQLERSALIDLALAAMDELLKMAQTDSPVWIKGLDGERDILNQEEYGRLISSCIGPKPAGFVAEATRETGIVIINSLALVETLMDANRYADMFQSMIARSANLDVLSGGIGGTRNGAIHLMHTEVQLLSPLVPVRQVRILRFCKQHAEGVWAVVDVSVEIGHDPSNAQPFISCRRLPSGCIVQDMPNGYSKVTWIEHWEYDESVVHQLYRPLLISGFGFGAHRWIATLQRQCEGLAILMSSSISNDDHAALSQAGRRSMLKLAQRMTNNFCSGVCASSARKWDSLQMGTLSDDMRVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRLFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQGQGNCVSLLRANAVNANDSSMLILQETWMDTSCSVVVYAPVDGQSLNVVMSGGDSAYVALLPSGFAIVPDGNDPSGYGMSNGTLQKGGAGDGGGSLLTVGFQILVNSLPTAKLTMESVDTVNNLISCTIQKIKAALRVA