AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05733


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05733.t1 MTR_3g464730 98.611 288 4 0 1 288 1 288 0.0 584
MS.gene05733.t1 MTR_3g082830 65.414 266 91 1 23 288 33 297 7.54e-127 365
MS.gene05733.t1 MTR_5g084770 61.888 286 107 2 1 285 1 285 2.23e-126 364
MS.gene05733.t1 MTR_5g084790 62.324 284 101 3 1 284 10 287 1.58e-124 359
MS.gene05733.t1 MTR_5g084750 58.947 285 116 1 1 285 3 286 6.38e-124 358
MS.gene05733.t1 MTR_8g014910 41.438 292 166 3 1 288 1 291 6.86e-74 230
MS.gene05733.t1 MTR_1g025760 41.445 263 154 0 26 288 78 340 2.08e-73 231
MS.gene05733.t1 MTR_1g025780 43.726 263 146 2 26 288 39 299 7.54e-72 225
MS.gene05733.t1 MTR_1g025700 38.889 288 175 1 1 288 23 309 1.24e-71 225
MS.gene05733.t1 MTR_8g075230 39.792 289 167 3 6 288 8 295 7.69e-71 223
MS.gene05733.t1 MTR_5g022630 41.438 292 158 6 6 288 17 304 1.20e-69 220
MS.gene05733.t1 MTR_2g100620 42.481 266 146 4 26 288 29 290 1.28e-69 219
MS.gene05733.t1 MTR_5g074270 39.716 282 158 4 14 284 9 289 7.14e-69 218
MS.gene05733.t1 MTR_4g087985 43.426 251 137 3 5 252 14 262 1.71e-68 217
MS.gene05733.t1 MTR_1g025680 41.197 284 157 3 14 288 12 294 4.11e-68 219
MS.gene05733.t1 MTR_3g114090 43.969 257 140 4 27 281 35 289 5.68e-68 215
MS.gene05733.t1 MTR_1g025720 36.806 288 181 1 1 288 10 296 1.52e-66 212
MS.gene05733.t1 MTR_2g015080 42.336 274 139 6 1 263 13 278 3.51e-66 211
MS.gene05733.t1 MTR_8g075200 42.798 243 138 1 27 269 40 281 6.91e-65 209
MS.gene05733.t1 MTR_5g022640 37.201 293 176 4 1 288 14 303 8.56e-65 207
MS.gene05733.t1 MTR_3g114120 38.783 263 160 1 26 288 45 306 7.56e-64 205
MS.gene05733.t1 MTR_8g075220 41.935 248 138 3 27 269 39 285 3.48e-63 203
MS.gene05733.t1 MTR_2g084585 41.132 265 147 4 26 286 28 287 8.88e-61 197
MS.gene05733.t1 MTR_4g056160 40.925 281 160 4 11 288 10 287 1.17e-60 196
MS.gene05733.t1 MTR_4g056280 41.509 265 150 3 26 288 28 289 2.41e-60 196
MS.gene05733.t1 MTR_1g025910 36.078 255 159 2 33 286 41 292 5.33e-58 190
MS.gene05733.t1 MTR_5g083040 36.531 271 163 3 25 288 29 297 5.25e-54 179
MS.gene05733.t1 MTR_7g116520 35.135 296 182 7 1 288 1 294 1.95e-53 178
MS.gene05733.t1 MTR_1g079540 34.276 283 182 4 8 288 11 291 1.21e-52 176
MS.gene05733.t1 MTR_7g116570 34.722 288 182 5 4 288 10 294 1.30e-52 176
MS.gene05733.t1 MTR_1g024890 37.262 263 161 4 28 288 32 292 2.16e-52 175
MS.gene05733.t1 MTR_1g069175 34.471 293 179 7 4 288 8 295 1.25e-51 173
MS.gene05733.t1 MTR_7g116510 36.502 263 164 3 28 288 25 286 3.69e-50 169
MS.gene05733.t1 MTR_1g079530 39.130 253 148 5 28 276 29 279 5.40e-50 169
MS.gene05733.t1 MTR_6g021530 37.023 262 160 5 30 288 31 290 7.52e-50 169
MS.gene05733.t1 MTR_7g116500 35.361 263 166 4 28 288 33 293 2.06e-49 167
MS.gene05733.t1 MTR_5g078210 35.769 260 162 4 31 288 28 284 1.03e-48 165
MS.gene05733.t1 MTR_4g019880 35.616 292 179 7 3 288 6 294 2.78e-48 165
MS.gene05733.t1 MTR_5g078210 35.769 260 162 4 31 288 28 284 5.53e-48 164
MS.gene05733.t1 MTR_2g044100 35.254 295 175 8 4 288 12 300 6.43e-48 164
MS.gene05733.t1 MTR_2g033930 33.099 284 185 4 6 288 11 290 1.38e-47 163
MS.gene05733.t1 MTR_8g087870 36.122 263 161 6 3 263 6 263 1.08e-46 160
MS.gene05733.t1 MTR_4g035353 33.910 289 179 6 6 288 9 291 4.77e-46 159
MS.gene05733.t1 MTR_8g079050 30.345 290 194 5 6 288 15 303 1.01e-45 158
MS.gene05733.t1 MTR_4g122200 33.916 286 180 6 7 288 15 295 2.14e-45 157
MS.gene05733.t1 MTR_5g009100 36.364 264 156 6 31 288 49 306 6.68e-45 156
MS.gene05733.t1 MTR_2g033920 34.409 279 175 5 14 288 21 295 7.02e-45 154
MS.gene05733.t1 MTR_3g435540 34.221 263 163 6 31 288 26 283 1.92e-44 154
MS.gene05733.t1 MTR_3g024510 36.090 266 165 4 25 288 35 297 2.19e-44 154
MS.gene05733.t1 MTR_2g033920 34.409 279 175 5 14 288 21 295 2.43e-44 154
MS.gene05733.t1 MTR_3g098270 34.043 282 178 5 14 288 17 297 3.43e-44 154
MS.gene05733.t1 MTR_4g108690 34.483 261 165 5 31 288 30 287 1.09e-42 150
MS.gene05733.t1 MTR_2g017955 37.165 261 155 7 4 260 9 264 1.40e-42 150
MS.gene05733.t1 MTR_3g005650 33.333 270 173 5 1 269 3 266 1.55e-42 149
MS.gene05733.t1 MTR_0565s0010 32.414 290 190 5 2 288 6 292 2.30e-42 149
MS.gene05733.t1 MTR_2g017875 36.328 256 151 7 10 260 19 267 1.95e-41 147
MS.gene05733.t1 MTR_2g017925 37.165 261 155 7 4 260 9 264 1.18e-40 145
MS.gene05733.t1 MTR_8g087890 33.216 283 182 5 9 288 12 290 2.44e-40 144
MS.gene05733.t1 MTR_3g021460 32.095 296 176 8 5 288 8 290 4.88e-40 142
MS.gene05733.t1 MTR_7g008060 29.758 289 183 7 4 288 8 280 5.20e-40 142
MS.gene05733.t1 MTR_8g022810 36.800 250 148 7 28 273 41 284 6.34e-39 140
MS.gene05733.t1 MTR_8g074570 31.633 294 185 6 5 288 11 298 7.64e-39 140
MS.gene05733.t1 MTR_0009s0250 33.212 274 168 6 5 275 10 271 1.34e-38 139
MS.gene05733.t1 MTR_8g074580 31.757 296 182 7 4 288 19 305 6.16e-38 139
MS.gene05733.t1 MTR_2g017965 34.815 270 163 8 1 261 1 266 7.01e-38 137
MS.gene05733.t1 MTR_5g093090 31.818 286 181 7 11 288 11 290 1.61e-37 135
MS.gene05733.t1 MTR_8g031430 32.210 267 160 8 28 288 37 288 5.49e-37 135
MS.gene05733.t1 MTR_5g093090 31.615 291 185 7 6 288 6 290 1.01e-36 134
MS.gene05733.t1 MTR_3g052480 34.231 260 154 8 25 273 30 283 2.84e-36 133
MS.gene05733.t1 MTR_2g461580 31.469 286 189 7 6 288 9 290 3.68e-36 132
MS.gene05733.t1 MTR_1g079590 38.547 179 107 3 28 204 31 208 1.36e-35 127
MS.gene05733.t1 MTR_8g031390 31.061 264 166 8 28 288 37 287 1.37e-35 130
MS.gene05733.t1 MTR_5g084880 56.436 101 44 0 185 285 9 109 1.38e-35 125
MS.gene05733.t1 MTR_3g052490 35.458 251 143 8 25 263 29 272 1.64e-35 131
MS.gene05733.t1 MTR_8g031420 32.576 264 163 8 28 288 35 286 2.87e-35 130
MS.gene05733.t1 MTR_8g031390 31.061 264 166 8 28 288 37 287 2.90e-35 130
MS.gene05733.t1 MTR_8g074560 29.667 300 188 9 1 284 1 293 9.54e-35 129
MS.gene05733.t1 MTR_3g023220 35.565 239 143 6 25 260 30 260 1.00e-34 129
MS.gene05733.t1 MTR_8g031400 31.061 264 167 8 28 288 37 288 1.04e-33 126
MS.gene05733.t1 MTR_4g036375 41.611 149 87 0 26 174 28 176 1.22e-33 122
MS.gene05733.t1 MTR_8g022810 37.500 208 122 6 28 233 41 242 1.90e-33 124
MS.gene05733.t1 MTR_8g022790 31.208 298 188 8 1 288 4 294 4.04e-33 124
MS.gene05733.t1 MTR_2g017915 33.197 244 149 7 8 243 8 245 2.14e-32 122
MS.gene05733.t1 MTR_3g005660 34.008 247 143 10 25 260 33 270 1.20e-31 121
MS.gene05733.t1 MTR_3g052580 29.252 294 191 8 1 285 1 286 2.12e-31 120
MS.gene05733.t1 MTR_3g052580 29.010 293 191 8 2 285 1 285 2.11e-30 118
MS.gene05733.t1 MTR_5g093090 36.548 197 114 6 6 194 6 199 8.49e-28 107
MS.gene05733.t1 MTR_2g018015 33.645 214 136 6 11 221 20 230 1.03e-26 106
MS.gene05733.t1 MTR_6g034400 40.650 123 72 1 81 203 4 125 1.89e-25 98.6
MS.gene05733.t1 MTR_1108s0010 37.500 160 84 3 131 288 3 148 1.12e-23 96.3
MS.gene05733.t1 MTR_2g087292 29.482 251 115 7 26 275 31 220 8.74e-22 92.8
MS.gene05733.t1 MTR_1g030340 29.078 282 153 12 9 263 20 281 2.13e-20 90.5
MS.gene05733.t1 MTR_7g087190 28.247 308 180 14 1 283 13 304 3.45e-20 89.7
MS.gene05733.t1 MTR_8g089805 26.045 311 191 12 1 288 11 305 5.02e-20 89.4
MS.gene05733.t1 MTR_1g030268 31.474 251 147 10 27 263 39 278 6.35e-20 88.6
MS.gene05733.t1 MTR_1g030268 31.474 251 147 10 27 263 39 278 1.68e-19 87.8
MS.gene05733.t1 MTR_1g060500 29.630 270 152 10 29 285 41 285 4.33e-19 86.3
MS.gene05733.t1 MTR_1g030230 26.578 301 196 10 2 288 6 295 1.20e-18 85.5
MS.gene05733.t1 MTR_1g030220 27.402 281 167 10 28 288 40 303 1.47e-18 85.1
MS.gene05733.t1 MTR_1g092740 28.740 254 159 7 29 282 39 270 3.08e-18 84.0
MS.gene05733.t1 MTR_6g007090 28.125 320 181 14 1 289 4 305 4.35e-18 83.6
MS.gene05733.t1 MTR_7g104220 30.741 270 159 11 22 285 36 283 5.55e-18 83.2
MS.gene05733.t1 MTR_7g111780 26.259 278 175 10 23 288 31 290 6.01e-18 83.2
MS.gene05733.t1 MTR_6g049220 45.556 90 49 0 26 115 28 117 7.49e-18 79.7
MS.gene05733.t1 MTR_6g007100 27.419 310 176 15 1 283 4 291 8.57e-18 82.8
MS.gene05733.t1 MTR_1g092690 27.059 255 163 8 29 283 52 283 2.72e-17 81.3
MS.gene05733.t1 MTR_2g079080 27.653 311 183 13 2 288 1 293 3.19e-17 81.3
MS.gene05733.t1 MTR_5g087690 23.273 275 181 6 22 284 44 300 3.71e-17 81.3
MS.gene05733.t1 MTR_2g079090 27.653 311 183 13 2 288 1 293 6.33e-17 80.1
MS.gene05733.t1 MTR_3g438030 27.575 301 196 11 2 288 1 293 2.26e-16 78.6
MS.gene05733.t1 MTR_7g116870 25.084 299 194 9 3 285 6 290 2.44e-16 78.6
MS.gene05733.t1 MTR_6g045057 77.083 48 11 0 238 285 149 196 2.79e-16 76.6
MS.gene05733.t1 MTR_1g092760 30.252 238 141 8 29 265 40 253 3.02e-16 78.2
MS.gene05733.t1 MTR_7g033165 28.030 264 155 11 21 263 26 275 4.36e-16 77.4
MS.gene05733.t1 MTR_7g113860 28.112 249 150 9 27 259 28 263 1.28e-15 76.6
MS.gene05733.t1 MTR_7g033165 28.030 264 155 11 21 263 26 275 1.32e-15 76.6
MS.gene05733.t1 MTR_7g033150 27.211 294 155 15 21 277 28 299 1.54e-15 76.3
MS.gene05733.t1 MTR_3g069780 28.070 285 178 11 20 288 20 293 1.90e-15 75.9
MS.gene05733.t1 MTR_7g113860 27.273 275 165 10 4 259 11 269 2.45e-15 75.9
MS.gene05733.t1 MTR_2g015580 26.246 301 190 12 12 288 25 317 3.41e-15 75.5
MS.gene05733.t1 MTR_3g448360 26.518 313 184 12 2 288 1 293 9.00e-15 73.9
MS.gene05733.t1 MTR_2g015630 27.273 275 173 11 33 288 36 302 9.33e-15 73.9
MS.gene05733.t1 MTR_6g049230 41.111 90 49 2 201 288 71 158 2.34e-14 70.5
MS.gene05733.t1 MTR_0127s0040 31.875 160 92 7 133 285 16 165 5.34e-14 70.5
MS.gene05733.t1 MTR_1g060490 27.341 267 157 10 29 285 38 277 8.92e-14 70.9
MS.gene05733.t1 MTR_2g015590 27.937 315 168 14 8 289 12 300 3.30e-13 69.3
MS.gene05733.t1 MTR_2g015590 28.025 314 167 14 8 288 12 299 5.05e-13 68.9
MS.gene05733.t1 MTR_7g033155 27.451 306 158 17 28 289 38 323 5.84e-13 68.9
MS.gene05733.t1 MTR_2g015650 27.835 291 175 13 20 288 21 298 7.25e-13 68.6
MS.gene05733.t1 MTR_8g028160 24.653 288 175 12 28 288 36 308 9.08e-13 68.2
MS.gene05733.t1 MTR_3g069520 30.932 236 131 12 2 222 1 219 1.67e-11 64.3
MS.gene05733.t1 MTR_8g089805 24.771 218 142 6 87 288 26 237 3.22e-11 63.2
MS.gene05733.t1 MTR_2g043990 24.841 314 166 14 1 288 69 338 9.19e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05733.t1 AT2G42990 60.069 288 113 2 2 288 1 287 9.22e-126 362
MS.gene05733.t1 AT2G04570 57.639 288 121 1 1 288 1 287 4.88e-120 348
MS.gene05733.t1 AT4G26790 61.509 265 101 1 24 288 25 288 1.91e-114 334
MS.gene05733.t1 AT4G26790 61.509 265 101 1 24 288 25 288 1.91e-114 334
MS.gene05733.t1 AT3G43550 40.550 291 164 4 2 288 1 286 3.68e-76 234
MS.gene05733.t1 AT1G06990 41.304 276 159 2 15 288 24 298 9.35e-74 230
MS.gene05733.t1 AT1G59406 40.550 291 164 4 2 288 1 286 3.79e-73 228
MS.gene05733.t1 AT1G59030 40.550 291 164 4 2 288 1 286 3.79e-73 228
MS.gene05733.t1 AT1G58725 40.550 291 164 4 2 288 1 286 3.79e-73 228
MS.gene05733.t1 AT2G31540 40.909 264 154 2 27 288 34 297 2.26e-72 227
MS.gene05733.t1 AT2G24560 40.909 264 154 2 27 288 33 296 4.79e-72 224
MS.gene05733.t1 AT1G58520 42.424 264 146 3 26 288 28 286 9.44e-72 224
MS.gene05733.t1 AT1G58525 42.424 264 146 3 26 288 28 286 9.44e-72 224
MS.gene05733.t1 AT2G24560 40.909 264 154 2 27 288 33 296 3.79e-71 224
MS.gene05733.t1 AT3G14820 38.947 285 168 4 5 288 8 287 2.66e-70 221
MS.gene05733.t1 AT2G30220 41.353 266 150 3 27 288 32 295 6.33e-70 220
MS.gene05733.t1 AT2G30310 37.329 292 177 3 3 288 5 296 2.62e-69 219
MS.gene05733.t1 AT3G16370 42.857 273 147 4 18 286 20 287 4.01e-69 218
MS.gene05733.t1 AT1G58430 38.832 291 170 3 6 288 7 297 7.39e-68 215
MS.gene05733.t1 AT3G43570 44.156 231 122 2 2 229 1 227 1.18e-67 213
MS.gene05733.t1 AT2G40250 39.051 274 159 3 21 288 29 300 1.42e-67 214
MS.gene05733.t1 AT5G63170 41.754 285 161 4 1 284 1 281 1.65e-67 213
MS.gene05733.t1 AT1G20135 40.357 280 159 4 14 288 11 287 5.61e-66 209
MS.gene05733.t1 AT5G45960 38.806 268 158 3 26 288 45 311 1.63e-65 209
MS.gene05733.t1 AT1G75880 36.860 293 176 2 4 288 20 311 1.28e-64 207
MS.gene05733.t1 AT1G75890 37.241 290 173 3 7 288 19 307 1.57e-64 207
MS.gene05733.t1 AT1G75890 37.241 290 173 3 7 288 48 336 3.42e-64 207
MS.gene05733.t1 AT5G03810 40.339 295 163 5 2 288 1 290 8.61e-64 204
MS.gene05733.t1 AT5G03820 40.136 294 162 6 2 286 4 292 1.87e-63 204
MS.gene05733.t1 AT5G03820 40.136 294 162 6 2 286 32 320 3.86e-63 204
MS.gene05733.t1 AT1G75880 36.735 294 176 3 4 288 20 312 7.97e-63 202
MS.gene05733.t1 AT1G75900 37.500 280 173 2 9 288 24 301 8.04e-63 202
MS.gene05733.t1 AT5G42170 39.544 263 155 2 26 288 48 306 2.26e-62 201
MS.gene05733.t1 AT5G45950 38.951 267 150 5 26 288 38 295 1.83e-61 199
MS.gene05733.t1 AT5G22810 40.741 270 148 5 26 288 32 296 2.66e-61 198
MS.gene05733.t1 AT1G75890 35.644 303 173 4 7 288 19 320 4.64e-61 198
MS.gene05733.t1 AT1G73610 38.077 260 155 3 26 284 33 287 1.27e-59 193
MS.gene05733.t1 AT1G20120 37.786 262 162 1 27 288 77 337 1.91e-59 194
MS.gene05733.t1 AT1G20132 34.981 263 170 1 26 288 59 320 2.18e-57 189
MS.gene05733.t1 AT1G23500 38.596 285 168 3 1 284 10 288 4.64e-56 184
MS.gene05733.t1 AT3G53100 36.332 289 176 3 1 285 1 285 8.14e-55 181
MS.gene05733.t1 AT1G75920 36.458 288 179 3 3 288 5 290 4.80e-54 179
MS.gene05733.t1 AT1G75910 35.448 268 171 1 23 288 23 290 2.75e-53 177
MS.gene05733.t1 AT4G28780 32.534 292 191 3 2 288 1 291 3.53e-52 175
MS.gene05733.t1 AT1G20130 35.165 273 163 4 26 288 182 450 4.17e-52 178
MS.gene05733.t1 AT1G20130 35.165 273 163 4 26 288 202 470 6.78e-52 178
MS.gene05733.t1 AT3G04290 35.517 290 171 6 5 288 10 289 4.20e-50 169
MS.gene05733.t1 AT3G50400 34.859 284 176 6 6 281 12 294 8.92e-50 169
MS.gene05733.t1 AT1G75920 34.437 302 179 4 4 288 1 300 2.51e-49 167
MS.gene05733.t1 AT2G23540 34.799 273 170 5 23 288 43 314 6.01e-48 164
MS.gene05733.t1 AT5G33370 34.981 263 167 4 28 288 30 290 9.95e-48 162
MS.gene05733.t1 AT5G33370 34.981 263 167 4 28 288 30 290 4.52e-47 161
MS.gene05733.t1 AT1G75930 35.052 291 179 7 3 288 5 290 8.27e-46 157
MS.gene05733.t1 AT4G10950 32.576 264 176 2 26 288 69 331 1.97e-45 158
MS.gene05733.t1 AT5G37690 32.069 290 188 6 4 288 1 286 5.42e-45 156
MS.gene05733.t1 AT5G08460 34.483 290 178 6 8 288 27 313 8.35e-44 153
MS.gene05733.t1 AT5G41890 31.884 276 180 4 14 281 17 292 3.29e-43 152
MS.gene05733.t1 AT1G74460 34.100 261 166 5 31 288 26 283 5.05e-43 151
MS.gene05733.t1 AT4G10950 32.197 264 173 2 26 288 69 327 5.10e-43 152
MS.gene05733.t1 AT1G29660 33.333 291 187 5 1 288 5 291 7.23e-43 150
MS.gene05733.t1 AT4G16230 32.530 249 160 5 2 245 3 248 1.55e-42 146
MS.gene05733.t1 AT5G18430 32.955 264 173 4 28 288 28 290 1.75e-42 149
MS.gene05733.t1 AT5G15720 35.926 270 161 8 26 288 28 292 4.27e-42 147
MS.gene05733.t1 AT5G15720 35.926 270 161 8 26 288 28 292 2.09e-41 147
MS.gene05733.t1 AT1G29670 33.446 296 182 8 2 288 1 290 6.43e-41 145
MS.gene05733.t1 AT1G71691 33.579 271 170 8 21 288 48 311 2.39e-40 142
MS.gene05733.t1 AT1G53920 34.545 275 167 9 18 288 38 303 2.72e-40 144
MS.gene05733.t1 AT1G29670 33.446 296 182 8 2 288 69 358 2.87e-40 145
MS.gene05733.t1 AT1G75920 34.728 239 153 2 52 288 25 262 4.17e-40 142
MS.gene05733.t1 AT2G19010 33.456 272 159 8 7 270 9 266 7.31e-40 142
MS.gene05733.t1 AT1G71691 33.579 271 170 8 21 288 48 311 1.28e-39 142
MS.gene05733.t1 AT2G19010 33.579 271 158 8 8 270 40 296 1.75e-39 142
MS.gene05733.t1 AT5G37690 30.345 290 185 7 4 288 1 278 5.57e-39 140
MS.gene05733.t1 AT2G04020 39.904 208 107 8 24 224 39 235 3.27e-38 135
MS.gene05733.t1 AT2G19060 34.545 275 163 8 3 270 4 268 3.46e-38 138
MS.gene05733.t1 AT1G71250 32.967 273 175 5 20 288 33 301 4.38e-38 138
MS.gene05733.t1 AT1G75920 30.556 288 165 4 3 288 5 259 1.54e-37 135
MS.gene05733.t1 AT2G04020 39.904 208 107 8 24 224 39 235 2.13e-37 135
MS.gene05733.t1 AT4G18970 34.211 266 169 5 26 288 26 288 5.38e-37 135
MS.gene05733.t1 AT2G03980 33.457 269 161 8 24 286 39 295 5.61e-37 135
MS.gene05733.t1 AT2G03980 33.457 269 161 8 24 286 39 295 5.61e-37 135
MS.gene05733.t1 AT2G03980 33.457 269 161 8 24 286 39 295 5.61e-37 135
MS.gene05733.t1 AT2G03980 33.457 269 161 8 24 286 39 295 5.61e-37 135
MS.gene05733.t1 AT3G14225 31.365 271 168 7 28 288 37 299 6.85e-37 135
MS.gene05733.t1 AT4G18970 34.211 266 169 5 26 288 26 288 1.17e-36 135
MS.gene05733.t1 AT3G14225 31.579 266 170 6 28 288 37 295 3.03e-36 133
MS.gene05733.t1 AT5G40990 32.319 263 172 5 28 288 37 295 5.77e-36 132
MS.gene05733.t1 AT1G53940 32.836 268 166 7 28 289 39 298 6.02e-36 131
MS.gene05733.t1 AT5G45670 30.137 292 197 6 1 288 1 289 6.05e-36 132
MS.gene05733.t1 AT5G55050 31.317 281 181 8 16 288 27 303 1.14e-34 129
MS.gene05733.t1 AT1G53940 32.584 267 166 7 28 288 39 297 1.56e-34 129
MS.gene05733.t1 AT2G19050 33.195 241 149 6 25 263 28 258 3.26e-34 125
MS.gene05733.t1 AT2G31550 37.419 155 96 1 135 288 2 156 1.36e-33 122
MS.gene05733.t1 AT2G19050 33.200 250 153 7 25 270 28 267 1.79e-33 125
MS.gene05733.t1 AT1G33811 33.712 264 152 11 25 274 31 285 2.89e-33 125
MS.gene05733.t1 AT4G30140 34.025 241 143 8 25 261 30 258 8.69e-30 115
MS.gene05733.t1 AT1G71120 30.909 275 176 6 18 288 21 285 2.02e-29 115
MS.gene05733.t1 AT1G53990 28.000 300 190 8 1 288 1 286 5.44e-28 111
MS.gene05733.t1 AT1G54020 29.893 281 168 11 6 279 8 266 5.71e-26 105
MS.gene05733.t1 AT1G54010 29.352 293 175 10 6 287 11 282 8.23e-26 105
MS.gene05733.t1 AT3G14210 31.698 265 148 12 28 282 36 277 6.74e-25 103
MS.gene05733.t1 AT1G54030 30.579 242 145 7 28 267 52 272 1.13e-23 98.6
MS.gene05733.t1 AT1G54000 27.586 261 168 8 6 262 11 254 2.27e-23 99.0
MS.gene05733.t1 AT1G54030 30.705 241 144 7 29 267 53 272 3.75e-23 98.6
MS.gene05733.t1 AT3G14220 30.976 297 157 15 9 285 8 276 8.45e-23 97.1
MS.gene05733.t1 AT2G27360 27.541 305 191 10 5 288 7 302 8.88e-21 91.7
MS.gene05733.t1 AT3G26430 27.922 308 182 14 4 288 6 296 5.83e-20 89.0
MS.gene05733.t1 AT5G03610 28.906 256 157 9 29 280 44 278 4.95e-19 86.3
MS.gene05733.t1 AT5G14450 27.961 304 186 10 7 289 20 311 7.38e-19 86.3
MS.gene05733.t1 AT1G67830 28.996 269 158 11 27 276 29 283 7.69e-19 85.9
MS.gene05733.t1 AT5G15720 29.187 209 139 6 87 288 55 261 4.16e-18 83.6
MS.gene05733.t1 AT1G71691 27.103 214 147 7 78 288 3 210 4.87e-18 82.4
MS.gene05733.t1 AT1G09390 25.168 298 195 11 4 288 12 294 6.41e-18 83.2
MS.gene05733.t1 AT1G28590 28.803 309 171 14 10 288 15 304 6.76e-18 83.6
MS.gene05733.t1 AT1G56670 25.818 275 175 10 27 288 39 297 1.30e-17 81.6
MS.gene05733.t1 AT1G54790 26.490 302 191 10 4 288 8 295 1.53e-17 82.4
MS.gene05733.t1 AT1G28610 27.723 303 181 13 10 288 10 298 1.70e-17 82.0
MS.gene05733.t1 AT5G45910 30.032 313 175 14 4 288 6 302 1.97e-17 82.0
MS.gene05733.t1 AT1G28600 27.974 311 188 13 1 288 1 298 2.62e-17 81.6
MS.gene05733.t1 AT1G56670 25.818 275 175 10 27 288 39 297 2.78e-17 81.3
MS.gene05733.t1 AT1G28580 25.890 309 192 14 4 288 10 305 2.86e-17 81.6
MS.gene05733.t1 AT3G09930 29.963 267 141 11 29 280 40 275 1.52e-16 79.3
MS.gene05733.t1 AT3G09930 29.963 267 141 11 29 280 40 275 1.52e-16 79.3
MS.gene05733.t1 AT1G28570 26.923 312 194 14 1 288 1 302 1.55e-16 79.3
MS.gene05733.t1 AT4G16220 43.636 110 53 3 6 114 13 114 1.66e-16 77.4
MS.gene05733.t1 AT3G27950 27.425 299 184 12 2 282 8 291 1.80e-16 79.0
MS.gene05733.t1 AT1G31550 27.597 308 190 12 1 288 9 303 4.03e-16 78.2
MS.gene05733.t1 AT1G28650 26.299 308 195 14 1 288 10 305 8.99e-16 77.0
MS.gene05733.t1 AT1G31550 27.632 304 187 12 1 284 9 299 4.54e-15 75.1
MS.gene05733.t1 AT1G28640 24.601 313 194 13 1 288 8 303 9.67e-15 74.3
MS.gene05733.t1 AT1G28670 27.184 309 192 14 1 288 8 304 1.22e-14 73.9
MS.gene05733.t1 AT1G54790 25.243 309 189 12 2 288 6 294 6.05e-14 72.0
MS.gene05733.t1 AT1G54790 25.243 309 189 12 2 288 6 294 6.35e-14 71.6
MS.gene05733.t1 AT3G48460 25.413 303 186 13 12 288 15 303 1.13e-13 70.9
MS.gene05733.t1 AT3G05180 27.519 258 148 10 23 259 31 270 1.28e-13 70.9
MS.gene05733.t1 AT4G01130 24.138 290 168 12 28 289 34 299 2.38e-11 63.9
MS.gene05733.t1 AT4G01130 24.221 289 167 12 28 288 34 298 5.38e-11 63.2

Find 55 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCAATTGTTCCTGCTTATT+TGG 0.108815 3.1:+48651430 MS.gene05733:CDS
TGAAAGGGCCATAAATATTA+TGG 0.173430 3.1:+48653099 MS.gene05733:CDS
TCCAGGATGTGATACCTTTA+TGG 0.179807 3.1:+48652789 MS.gene05733:intron
AATAAGGGAGTCTTTATATT+TGG 0.192260 3.1:+48652886 MS.gene05733:CDS
TTTGGAGTTCAATGCAAAAT+TGG 0.200949 3.1:+48653159 MS.gene05733:CDS
AGAAGGCTAAAGAAATAATA+AGG 0.205621 3.1:+48652870 MS.gene05733:CDS
ATGTAGACCCATAATATTTA+TGG 0.208788 3.1:-48653107 None:intergenic
GTTGCACAACCTTCTCAATT+TGG 0.222834 3.1:+48653265 MS.gene05733:CDS
GGAGACTCTTCTGTTGATTC+AGG 0.247186 3.1:+48651269 MS.gene05733:CDS
AAGAAATTGAAAGCATCTTT+TGG 0.301912 3.1:+48652842 MS.gene05733:CDS
CTTAGTATCAAAGTTGAATA+AGG 0.332106 3.1:+48653186 MS.gene05733:CDS
GATTTCATCTCTGAGGCATT+TGG 0.337671 3.1:+48651401 MS.gene05733:CDS
AAGATGCTTTCAATTTCTTT+TGG 0.344742 3.1:-48652838 None:intergenic
TCCAAATAAGCAGGAACAAT+TGG 0.379299 3.1:-48651431 None:intergenic
TTTGGAAAATCTTTACCATA+TGG 0.380470 3.1:-48651335 None:intergenic
AATTCAACTTCTTTCCATAA+AGG 0.381519 3.1:-48652803 None:intergenic
CTAGGTCATAAATTTCTCTA+AGG 0.395264 3.1:-48653024 None:intergenic
TGGGGTGTCTGCCACTTGAA+AGG 0.401836 3.1:+48653083 MS.gene05733:CDS
GAAAGGGCCATAAATATTAT+GGG 0.413250 3.1:+48653100 MS.gene05733:CDS
TTGGAGTTCAATGCAAAATT+GGG 0.415782 3.1:+48653160 MS.gene05733:CDS
GGACCTCCATGGATTTCAAT+TGG 0.436345 3.1:+48653207 MS.gene05733:CDS
GTATTACAATGATGTAGCTT+TGG 0.439985 3.1:+48653141 MS.gene05733:CDS
TCTGACAGGATTGCCTCCCA+TGG 0.445054 3.1:+48653063 MS.gene05733:CDS
CTACCAGTAGCATCCCCATT+TGG 0.462146 3.1:-48651353 None:intergenic
TTTCCAAATGGGGATGCTAC+TGG 0.466452 3.1:+48651350 MS.gene05733:CDS
CTTAGAGAAATTTATGACCT+AGG 0.466601 3.1:+48653025 MS.gene05733:CDS
CTGACAGGATTGCCTCCCAT+GGG 0.468749 3.1:+48653064 MS.gene05733:CDS
TAAAACTGTTCAAGAATATG+AGG 0.472091 3.1:+48652973 MS.gene05733:CDS
AATTTGCAGTATCAAATCAT+AGG 0.474855 3.1:-48653242 None:intergenic
GAAGGCTAAAGAAATAATAA+GGG 0.479372 3.1:+48652871 MS.gene05733:CDS
GGGGTGTCTGCCACTTGAAA+GGG 0.479500 3.1:+48653084 MS.gene05733:CDS
GCAAGGAAAATTTCTCTGAC+AGG 0.483651 3.1:+48653049 MS.gene05733:CDS
CATCTACCAATTGAAATCCA+TGG 0.493897 3.1:-48653213 None:intergenic
ATTTCATTCCAACATTAGCT+AGG 0.520508 3.1:+48651300 MS.gene05733:CDS
GGAAAATCTTTACCATATGG+TGG 0.532684 3.1:-48651332 None:intergenic
TAAGTAGGATCCAAATAAGC+AGG 0.535765 3.1:-48651440 None:intergenic
TTCAAGTGGCAGACACCCCA+TGG 0.536664 3.1:-48653080 None:intergenic
AAATTGCTCCTAGCTAATGT+TGG 0.544150 3.1:-48651308 None:intergenic
AAATCTGATATATCATAAGT+AGG 0.544264 3.1:-48651455 None:intergenic
ATTACACACAGCTTGAAAGA+AGG 0.561595 3.1:+48652942 MS.gene05733:CDS
GCTACTGGTAGATTCTCAAA+TGG 0.564673 3.1:+48651365 MS.gene05733:CDS
TCTTTATATTTGGTTAGCAT+AGG 0.567797 3.1:+48652896 MS.gene05733:CDS
CACACAGCTTGAAAGAAGGA+TGG 0.578080 3.1:+48652946 MS.gene05733:CDS
ACAAACTTACCAAATTGAGA+AGG 0.602477 3.1:-48653274 None:intergenic
TGCTACTGATTTCATCTCTG+AGG 0.610128 3.1:+48651394 MS.gene05733:CDS
CATGTTTCAATATCAAACAG+TGG 0.622985 3.1:+48651221 MS.gene05733:CDS
ATATTTATGGCCCTTTCAAG+TGG 0.628697 3.1:-48653094 None:intergenic
GAAAGAAGTTGAATTCTACA+AGG 0.633030 3.1:+48652811 MS.gene05733:CDS
TATGGGTCTACATAGTTGTG+TGG 0.633469 3.1:+48653117 MS.gene05733:CDS
AAATTTATGACCTAGGAGCA+AGG 0.635448 3.1:+48653032 MS.gene05733:CDS
AGTGGCAGACACCCCATGGG+AGG 0.650858 3.1:-48653076 None:intergenic
TGACAGGATTGCCTCCCATG+GGG 0.655123 3.1:+48653065 MS.gene05733:CDS
TCAAGTGGCAGACACCCCAT+GGG 0.655358 3.1:-48653079 None:intergenic
AAGTTGAATAAGGACCTCCA+TGG 0.665684 3.1:+48653196 MS.gene05733:CDS
CTACCAATTGAAATCCATGG+AGG 0.762628 3.1:-48653210 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGACAAAAAATATTTAA+AGG + chr3.1:48652307-48652326 MS.gene05733:intron 10.0%
!! TATATTTATAGCAATAAAAA+AGG + chr3.1:48652375-48652394 MS.gene05733:intron 10.0%
!!! ATAATATTTTATATGTATGA+TGG + chr3.1:48653335-48653354 MS.gene05733:intron 10.0%
!!! TAATATTTTATATGTATGAT+GGG + chr3.1:48653336-48653355 MS.gene05733:intron 10.0%
!!! TTTTTATGTTGAAAAATAAA+AGG + chr3.1:48653551-48653570 MS.gene05733:intron 10.0%
!! AAAATTGACAAAATTGAAAA+AGG + chr3.1:48651653-48651672 MS.gene05733:intron 15.0%
!! AATAAAAATTGAACTCAAAT+AGG - chr3.1:48652762-48652781 None:intergenic 15.0%
!!! AGAATGAAATTTTATGTTTT+TGG + chr3.1:48652128-48652147 MS.gene05733:intron 15.0%
!!! GTACTAATATCATTTTTTTT+AGG - chr3.1:48652740-48652759 None:intergenic 15.0%
!!! GTAGATATTTTTTTAATACA+TGG + chr3.1:48652060-48652079 MS.gene05733:intron 15.0%
!!! TAGTTACATTTTTTTTTCTT+TGG + chr3.1:48651551-48651570 MS.gene05733:intron 15.0%
!! AAATCTGATATATCATAAGT+AGG - chr3.1:48651458-48651477 None:intergenic 20.0%
!! AACTTACATTCAATTATTTG+AGG + chr3.1:48651922-48651941 MS.gene05733:intron 20.0%
!! AATTCTTTCAAAAATCTGAA+TGG + chr3.1:48652245-48652264 MS.gene05733:intron 20.0%
!! AATTGTTTCATGATTTATTG+AGG + chr3.1:48653613-48653632 MS.gene05733:intron 20.0%
!! ACTTACATTCAATTATTTGA+GGG + chr3.1:48651923-48651942 MS.gene05733:intron 20.0%
!! AGTATTAAAATGATTGGAAA+TGG - chr3.1:48651969-48651988 None:intergenic 20.0%
!! ATTAGACAAAACAAATAACA+AGG - chr3.1:48653668-48653687 None:intergenic 20.0%
!! ATTGTTTCATGATTTATTGA+GGG + chr3.1:48653614-48653633 MS.gene05733:intron 20.0%
!! TAACATTTAAGTGACTATAA+TGG + chr3.1:48653429-48653448 MS.gene05733:intron 20.0%
!! TCAAATAATTGAATGTAAGT+TGG - chr3.1:48651923-48651942 None:intergenic 20.0%
!! TTTCAAGAAAAGAAAAGAAA+AGG + chr3.1:48651856-48651875 MS.gene05733:intron 20.0%
!!! AATTAGTTTCTGAAATTGTT+TGG + chr3.1:48651726-48651745 MS.gene05733:intron 20.0%
!!! AATTTTTATTGTGTTTTTCC+AGG + chr3.1:48652772-48652791 MS.gene05733:intron 20.0%
!!! AGCTAAAGTATTAAAATGAT+TGG - chr3.1:48651975-48651994 None:intergenic 20.0%
!!! ATTAGTTTCTGAAATTGTTT+GGG + chr3.1:48651727-48651746 MS.gene05733:intron 20.0%
!!! ATTTTTGTTAGTATATACTC+TGG + chr3.1:48653584-48653603 MS.gene05733:intron 20.0%
!!! CTAATATCATTTTTTTTAGG+AGG - chr3.1:48652737-48652756 None:intergenic 20.0%
!!! TAGTTTTGTAGATTAAAAGT+AGG + chr3.1:48652032-48652051 MS.gene05733:intron 20.0%
!!! TGATGAAAATGTACATTTTA+TGG + chr3.1:48651174-48651193 MS.gene05733:CDS 20.0%
!!! TTTTCTTTTCTTTTCTTGAA+AGG - chr3.1:48651857-48651876 None:intergenic 20.0%
! AATAAGGGAGTCTTTATATT+TGG + chr3.1:48652886-48652905 MS.gene05733:CDS 25.0%
! AATTCAACTTCTTTCCATAA+AGG - chr3.1:48652806-48652825 None:intergenic 25.0%
! AATTTGCAGTATCAAATCAT+AGG - chr3.1:48653245-48653264 None:intergenic 25.0%
! AGAAGGCTAAAGAAATAATA+AGG + chr3.1:48652870-48652889 MS.gene05733:CDS 25.0%
! ATGTAGACCCATAATATTTA+TGG - chr3.1:48653110-48653129 None:intergenic 25.0%
! ATTATAAGCATCAAACATCA+TGG - chr3.1:48653320-48653339 None:intergenic 25.0%
! CACACATAGTTTATTTGAAA+CGG + chr3.1:48651701-48651720 MS.gene05733:intron 25.0%
! CTTAGTATCAAAGTTGAATA+AGG + chr3.1:48653186-48653205 MS.gene05733:CDS 25.0%
! GAAGGCTAAAGAAATAATAA+GGG + chr3.1:48652871-48652890 MS.gene05733:CDS 25.0%
! GTAAAGATTATTAGACCATT+TGG + chr3.1:48651625-48651644 MS.gene05733:intron 25.0%
! GTTCATTATATTTGTTCACT+TGG + chr3.1:48652612-48652631 MS.gene05733:intron 25.0%
! TAAAACTGTTCAAGAATATG+AGG + chr3.1:48652973-48652992 MS.gene05733:CDS 25.0%
! TATATTTGTTCACTTGGTTA+AGG + chr3.1:48652618-48652637 MS.gene05733:intron 25.0%
! TCTTTATATTTGGTTAGCAT+AGG + chr3.1:48652896-48652915 MS.gene05733:CDS 25.0%
! TGACTTAAAAGTTAAAAGCA+TGG + chr3.1:48652279-48652298 MS.gene05733:intron 25.0%
! TGATTGAGTCTAATTTCATA+TGG - chr3.1:48652665-48652684 None:intergenic 25.0%
! TTTGGAAAATCTTTACCATA+TGG - chr3.1:48651338-48651357 None:intergenic 25.0%
!! AAGATGCTTTCAATTTCTTT+TGG - chr3.1:48652841-48652860 None:intergenic 25.0%
!! ATGGTAAAGATTTTCCAAAT+GGG + chr3.1:48651339-48651358 MS.gene05733:CDS 25.0%
!! TATGGTAAAGATTTTCCAAA+TGG + chr3.1:48651338-48651357 MS.gene05733:CDS 25.0%
!! TCTATCTTCAAGTATAGTTT+TGG - chr3.1:48653521-48653540 None:intergenic 25.0%
!!! AAGAAATTGAAAGCATCTTT+TGG + chr3.1:48652842-48652861 MS.gene05733:CDS 25.0%
ACAAACTTACCAAATTGAGA+AGG - chr3.1:48653277-48653296 None:intergenic 30.0%
AGTCTCCATTTATTATCAGT+GGG - chr3.1:48652509-48652528 None:intergenic 30.0%
ATTTCATTCCAACATTAGCT+AGG + chr3.1:48651300-48651319 MS.gene05733:CDS 30.0%
CATGTTTCAATATCAAACAG+TGG + chr3.1:48651221-48651240 MS.gene05733:CDS 30.0%
CTAGGTCATAAATTTCTCTA+AGG - chr3.1:48653027-48653046 None:intergenic 30.0%
CTTAGAGAAATTTATGACCT+AGG + chr3.1:48653025-48653044 MS.gene05733:CDS 30.0%
GAAAAGAAAAGGAACTCAAT+CGG + chr3.1:48651867-48651886 MS.gene05733:intron 30.0%
GAAAGAAGTTGAATTCTACA+AGG + chr3.1:48652811-48652830 MS.gene05733:CDS 30.0%
GAAAGGGCCATAAATATTAT+GGG + chr3.1:48653100-48653119 MS.gene05733:CDS 30.0%
GTATTACAATGATGTAGCTT+TGG + chr3.1:48653141-48653160 MS.gene05733:CDS 30.0%
TAAAGCTTTACATAACGAAG+AGG + chr3.1:48653819-48653838 MS.gene05733:intron 30.0%
TCTCCAAAAACAATTATAGC+TGG - chr3.1:48651254-48651273 None:intergenic 30.0%
TGAAAGGGCCATAAATATTA+TGG + chr3.1:48653099-48653118 MS.gene05733:CDS 30.0%
TTGGAGTTCAATGCAAAATT+GGG + chr3.1:48653160-48653179 MS.gene05733:CDS 30.0%
! GATATATCAGATTTTGCTAC+TGG + chr3.1:48651464-48651483 MS.gene05733:CDS 30.0%
! GTTCCAGCTATAATTGTTTT+TGG + chr3.1:48651248-48651267 MS.gene05733:CDS 30.0%
! TGGTAAAGATTTTCCAAATG+GGG + chr3.1:48651340-48651359 MS.gene05733:CDS 30.0%
! TTTGGAGTTCAATGCAAAAT+TGG + chr3.1:48653159-48653178 MS.gene05733:CDS 30.0%
!! AGCTTTAAAGTGATATGAGA+TGG - chr3.1:48653806-48653825 None:intergenic 30.0%
!! TAGGAGGTACTAATATCATT+TGG - chr3.1:48652721-48652740 None:intergenic 30.0%
!! TGTCAATTTTAGCAACCAAA+TGG - chr3.1:48651643-48651662 None:intergenic 30.0%
!!! TCGGGACAATTTTTTTTCTT+CGG + chr3.1:48652573-48652592 MS.gene05733:intron 30.0%
AAATTGCTCCTAGCTAATGT+TGG - chr3.1:48651311-48651330 None:intergenic 35.0%
AAATTTATGACCTAGGAGCA+AGG + chr3.1:48653032-48653051 MS.gene05733:CDS 35.0%
ATATTTATGGCCCTTTCAAG+TGG - chr3.1:48653097-48653116 None:intergenic 35.0%
ATTACACACAGCTTGAAAGA+AGG + chr3.1:48652942-48652961 MS.gene05733:CDS 35.0%
CAGTCTCCATTTATTATCAG+TGG - chr3.1:48652510-48652529 None:intergenic 35.0%
CATCTACCAATTGAAATCCA+TGG - chr3.1:48653216-48653235 None:intergenic 35.0%
GGAAAATCTTTACCATATGG+TGG - chr3.1:48651335-48651354 None:intergenic 35.0%
TAAGTAGGATCCAAATAAGC+AGG - chr3.1:48651443-48651462 None:intergenic 35.0%
TCCAAATAAGCAGGAACAAT+TGG - chr3.1:48651434-48651453 None:intergenic 35.0%
! AAATTTTCCTCGTGAAAGCT+CGG + chr3.1:48652554-48652573 MS.gene05733:intron 35.0%
!! GTTTCTGAAATTGTTTGGGA+TGG + chr3.1:48651731-48651750 MS.gene05733:intron 35.0%
!!! CGGGACAATTTTTTTTCTTC+GGG + chr3.1:48652574-48652593 MS.gene05733:intron 35.0%
AAGTTGAATAAGGACCTCCA+TGG + chr3.1:48653196-48653215 MS.gene05733:CDS 40.0%
CATGGCCCACTGATAATAAA+TGG + chr3.1:48652501-48652520 MS.gene05733:intron 40.0%
CATTTATTATCAGTGGGCCA+TGG - chr3.1:48652503-48652522 None:intergenic 40.0%
CTACCAATTGAAATCCATGG+AGG - chr3.1:48653213-48653232 None:intergenic 40.0%
GCAAGGAAAATTTCTCTGAC+AGG + chr3.1:48653049-48653068 MS.gene05733:CDS 40.0%
GCCAATTGTTCCTGCTTATT+TGG + chr3.1:48651430-48651449 MS.gene05733:CDS 40.0%
GCTACTGGTAGATTCTCAAA+TGG + chr3.1:48651365-48651384 MS.gene05733:CDS 40.0%
GTTGCACAACCTTCTCAATT+TGG + chr3.1:48653265-48653284 MS.gene05733:CDS 40.0%
TATGGGTCTACATAGTTGTG+TGG + chr3.1:48653117-48653136 MS.gene05733:CDS 40.0%
TCCAGGATGTGATACCTTTA+TGG + chr3.1:48652789-48652808 MS.gene05733:intron 40.0%
! AATTTTCCTCGTGAAAGCTC+GGG + chr3.1:48652555-48652574 MS.gene05733:intron 40.0%
! AGGAGCAATTTTCCACCATA+TGG + chr3.1:48651320-48651339 MS.gene05733:CDS 40.0%
! GAGAAATTTTCCTTGCTCCT+AGG - chr3.1:48653045-48653064 None:intergenic 40.0%
!! GATTTCATCTCTGAGGCATT+TGG + chr3.1:48651401-48651420 MS.gene05733:CDS 40.0%
!! TCCATAAAGGTATCACATCC+TGG - chr3.1:48652793-48652812 None:intergenic 40.0%
!! TGCTACTGATTTCATCTCTG+AGG + chr3.1:48651394-48651413 MS.gene05733:CDS 40.0%
!!! AGCATCTTTTGGTGATGAGA+AGG + chr3.1:48652853-48652872 MS.gene05733:CDS 40.0%
CACACAGCTTGAAAGAAGGA+TGG + chr3.1:48652946-48652965 MS.gene05733:CDS 45.0%
CATGGCCACAATACATAGGT+GGG - chr3.1:48652485-48652504 None:intergenic 45.0%
GGACCTCCATGGATTTCAAT+TGG + chr3.1:48653207-48653226 MS.gene05733:CDS 45.0%
GTAGCCAATAGAAAAGCGGT+CGG - chr3.1:48652463-48652482 None:intergenic 45.0%
GTGGGTAGCCAATAGAAAAG+CGG - chr3.1:48652467-48652486 None:intergenic 45.0%
TAGCCAATAGAAAAGCGGTC+GGG - chr3.1:48652462-48652481 None:intergenic 45.0%
TTTCCAAATGGGGATGCTAC+TGG + chr3.1:48651350-48651369 MS.gene05733:CDS 45.0%
! TGTTTTGCTTCTGCTGGTAC+TGG + chr3.1:48651491-48651510 MS.gene05733:CDS 45.0%
!! GGAGACTCTTCTGTTGATTC+AGG + chr3.1:48651269-48651288 MS.gene05733:CDS 45.0%
!! TATCCCGACCGCTTTTCTAT+TGG + chr3.1:48652456-48652475 MS.gene05733:intron 45.0%
!!! GGTGTTTGTTTTGCTTCTGC+TGG + chr3.1:48651485-48651504 MS.gene05733:CDS 45.0%
AAAAGCGGTCGGGATAACGT+CGG - chr3.1:48652452-48652471 None:intergenic 50.0%
AATTGTCCCGAGCTTTCACG+AGG - chr3.1:48652564-48652583 None:intergenic 50.0%
CCACCTATGTATTGTGGCCA+TGG + chr3.1:48652483-48652502 MS.gene05733:intron 50.0%
CCATGGCCACAATACATAGG+TGG - chr3.1:48652486-48652505 None:intergenic 50.0%
CTACCAGTAGCATCCCCATT+TGG - chr3.1:48651356-48651375 None:intergenic 50.0%
GGCTACCCACCTATGTATTG+TGG + chr3.1:48652477-48652496 MS.gene05733:intron 50.0%
CTGACAGGATTGCCTCCCAT+GGG + chr3.1:48653064-48653083 MS.gene05733:CDS 55.0%
GGGCCATGGCCACAATACAT+AGG - chr3.1:48652489-48652508 None:intergenic 55.0%
TCAAGTGGCAGACACCCCAT+GGG - chr3.1:48653082-48653101 None:intergenic 55.0%
TCTGACAGGATTGCCTCCCA+TGG + chr3.1:48653063-48653082 MS.gene05733:CDS 55.0%
TGACAGGATTGCCTCCCATG+GGG + chr3.1:48653065-48653084 MS.gene05733:CDS 55.0%
TTCAAGTGGCAGACACCCCA+TGG - chr3.1:48653083-48653102 None:intergenic 55.0%
! GGGGTGTCTGCCACTTGAAA+GGG + chr3.1:48653084-48653103 MS.gene05733:CDS 55.0%
! TGGGGTGTCTGCCACTTGAA+AGG + chr3.1:48653083-48653102 MS.gene05733:CDS 55.0%
AGTGGCAGACACCCCATGGG+AGG - chr3.1:48653079-48653098 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 48651173 48653960 48651173 ID=MS.gene05733
chr3.1 mRNA 48651173 48653960 48651173 ID=MS.gene05733.t1;Parent=MS.gene05733
chr3.1 exon 48651173 48651541 48651173 ID=MS.gene05733.t1.exon1;Parent=MS.gene05733.t1
chr3.1 CDS 48651173 48651541 48651173 ID=cds.MS.gene05733.t1;Parent=MS.gene05733.t1
chr3.1 exon 48652794 48653286 48652794 ID=MS.gene05733.t1.exon2;Parent=MS.gene05733.t1
chr3.1 CDS 48652794 48653286 48652794 ID=cds.MS.gene05733.t1;Parent=MS.gene05733.t1
chr3.1 exon 48653953 48653960 48653953 ID=MS.gene05733.t1.exon3;Parent=MS.gene05733.t1
chr3.1 CDS 48653953 48653960 48653953 ID=cds.MS.gene05733.t1;Parent=MS.gene05733.t1
Gene Sequence

>MS.gene05733

ATGATGAAAATGTACATTTTATGGCTCTTCTTTATTCAAATTTTGTTGCATGTTTCAATATCAAACAGTGGAAAAGTTCCAGCTATAATTGTTTTTGGAGACTCTTCTGTTGATTCAGGTAACAACAATTTCATTCCAACATTAGCTAGGAGCAATTTTCCACCATATGGTAAAGATTTTCCAAATGGGGATGCTACTGGTAGATTCTCAAATGGTAGAATTGCTACTGATTTCATCTCTGAGGCATTTGGAATTAAGCCAATTGTTCCTGCTTATTTGGATCCTACTTATGATATATCAGATTTTGCTACTGGTGTTTGTTTTGCTTCTGCTGGTACTGGATTTGATAATGCTACTGCAAATGTTGCTGTAAGTCTTTAGTTACATTTTTTTTTCTTTGGTATTTAATCAAAATTTCTCATGAGTTATTGTTTTAATTAGTTATTGAAATTGTAAAGATTATTAGACCATTTGGTTGCTAAAATTGACAAAATTGAAAAAGGATTCATGAAATTGAAAATTCTTGATCACACATAGTTTATTTGAAACGGTCAATTAGTTTCTGAAATTGTTTGGGATGGATTAATGTTATTTAGAATTTTTTTAATTTTAATTTTAAATATGATTGCAAAAATGTCATTAACTTTATAGAGTAAATCTACTTCAAGAACTCAATCTGTGCCTTTCAAGAAAAGAAAAGAAAAGGAACTCAATCGGTGATTTATATTTTATATACTCATGTGTTGTCCAACTTACATTCAATTATTTGAGGGTAAAATGTGTGCATTAATGACCATTTCCAATCATTTTAATACTTTAGCTAAATTATTGTATTAAAATTATTAAAGATCTCATATTATAGTTTTGTAGATTAAAAGTAGGTGTCAGTAGATATTTTTTTAATACATGGTGTTAATAGATGATTAAAGATGAAATTTTATGTTTTTTTTTTGAGAGAATGAAATTTTATGTTTTTGGAGTTTATAAAATCATATTTGATTCATGTTTTATTAAAAAGAAATTAATACTTTTGTGACAGAATTTCTTATAATATTTAAAATATGCATGCAAAAATTCTTTCAAAAATCTGAATGGTGTACATAAGATGACTTAAAAGTTAAAAGCATGGACAAAATATGACAAAAAATATTTAAAGGTCATTGTTTGAAGAAATATTTTAGAGTGACTAAAACGAAATTCGATATATTTATAGCAATAAAAAAGGTATTTAATCTTTCATTATAGAAAAATGCTTCTTAACGCGACAAGTTTTATTCCGACGTTATCCCGACCGCTTTTCTATTGGCTACCCACCTATGTATTGTGGCCATGGCCCACTGATAATAAATGGAGACTGTTTTTTATTTTTTTTGTTATAACTAAATTTTCCTCGTGAAAGCTCGGGACAATTTTTTTTCTTCGGGAGATATAGCACTTCTGTTCATTATATTTGTTCACTTGGTTAAGGTCAAATTAATTGTAATTCAATCCATATGAAATTAGACTCAATCATATTTTCATGCAAGAAATTAAGTTTTTCTACTGCCAAATGATATTAGTACCTCCTAAAAAAAATGATATTAGTACCTATTTGAGTTCAATTTTTATTGTGTTTTTCCAGGATGTGATACCTTTATGGAAAGAAGTTGAATTCTACAAGGACTACCAAAAGAAATTGAAAGCATCTTTTGGTGATGAGAAGGCTAAAGAAATAATAAGGGAGTCTTTATATTTGGTTAGCATAGGAACAAATGATTTTCTTGAGAACTATTACACACAGCTTGAAAGAAGGATGGAATATAAAACTGTTCAAGAATATGAGGATTTTTTAATTGTTCTTGCTGAAAATTTCCTTAGAGAAATTTATGACCTAGGAGCAAGGAAAATTTCTCTGACAGGATTGCCTCCCATGGGGTGTCTGCCACTTGAAAGGGCCATAAATATTATGGGTCTACATAGTTGTGTGGAGTATTACAATGATGTAGCTTTGGAGTTCAATGCAAAATTGGGATGCTTAGTATCAAAGTTGAATAAGGACCTCCATGGATTTCAATTGGTAGATGCAAATGCCTATGATTTGATACTGCAAATTGTTGCACAACCTTCTCAATTTGGTAAGTTTGTTTTTGTTTTTCTATCTTACTCCATGATGTTTGATGCTTATAATATTTTATATGTATGATGGGAATGATTTCTCTAATTTTTCTTTTAATTTCTTTCATTATTACTCTATAATTTTAAAACAAACATAAAGTGTAACATTTAAGTGACTATAATGGTGCGTTTAATTCACAAAATAGTAAGAACAAAACATAACAGTACATGACATTACAAGACAAGATAAGCCAAAACTATACTTGAAGATAGATCAATAATATTTTTTATGTTGAAAAATAAAAGGATATTCTAGTATTTTTGTTAGTATATACTCTGGACAAGAAATTGTTTCATGATTTATTGAGGGTGAAAAAAAAATCATGTTTTTATCAATGCCTTGTTATTTGTTTTGTCTAATCTCATAATCATTGTCTATTCTCATGATCAGTTTCTAAATCAATCAAAATAAATAAAGTTATCAAGTAGAATCTCTTATTTTTCAGCAAATAAAACAGATCTTAAGTATATTGTATCCATCTCATATCACTTTAAAGCTTTACATAACGAAGAGGAGAAAAGAGAGAACATAAACAAATCTGTTTAAAAAAATAAGAAATAATTGCTTCTTAAAAAGATTTTTGTGATATTGCTATTTTTATTAATCTACTTATTACAAATGCTAGCTAACTAA

Protein sequence

>MS.gene05733.t1

MMKMYILWLFFIQILLHVSISNSGKVPAIIVFGDSSVDSGNNNFIPTLARSNFPPYGKDFPNGDATGRFSNGRIATDFISEAFGIKPIVPAYLDPTYDISDFATGVCFASAGTGFDNATANVADVIPLWKEVEFYKDYQKKLKASFGDEKAKEIIRESLYLVSIGTNDFLENYYTQLERRMEYKTVQEYEDFLIVLAENFLREIYDLGARKISLTGLPPMGCLPLERAINIMGLHSCVEYYNDVALEFNAKLGCLVSKLNKDLHGFQLVDANAYDLILQIVAQPSQFAN