Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50721.t1 | XP_013456434.1 | 91.9 | 445 | 34 | 1 | 1 | 443 | 1 | 445 | 1.20E-211 | 746.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50721.t1 | Q8W4G3 | 72.3 | 347 | 96 | 0 | 97 | 443 | 110 | 456 | 1.1e-141 | 505.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50721.t1 | A0A072UX77 | 91.9 | 445 | 34 | 1 | 1 | 443 | 1 | 445 | 8.6e-212 | 746.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene50721 | 0.802735 | 4.87E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene50721 | 0.830201 | 3.36E-55 | -1.69E-46 |
| MS.gene049369 | MS.gene50721 | 0.832868 | 7.39E-56 | -1.69E-46 |
| MS.gene049907 | MS.gene50721 | 0.856152 | 3.90E-62 | -1.69E-46 |
| MS.gene050301 | MS.gene50721 | 0.819542 | 1.10E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene50721 | 0.819875 | 9.23E-53 | -1.69E-46 |
| MS.gene050520 | MS.gene50721 | 0.828858 | 7.12E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene50721 | 0.828569 | 8.36E-55 | -1.69E-46 |
| MS.gene051255 | MS.gene50721 | 0.861538 | 9.56E-64 | -1.69E-46 |
| MS.gene051360 | MS.gene50721 | 0.8676 | 1.21E-65 | -1.69E-46 |
| MS.gene052188 | MS.gene50721 | 0.822162 | 2.75E-53 | -1.69E-46 |
| MS.gene052287 | MS.gene50721 | 0.805973 | 1.03E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene50721 | 0.829824 | 4.15E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene50721 | 0.810686 | 1.02E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene50721 | 0.867732 | 1.10E-65 | -1.69E-46 |
| MS.gene053813 | MS.gene50721 | 0.830429 | 2.95E-55 | -1.69E-46 |
| MS.gene054556 | MS.gene50721 | 0.800416 | 1.46E-48 | -1.69E-46 |
| MS.gene055116 | MS.gene50721 | 0.802366 | 5.80E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene50721 | 0.805527 | 1.28E-49 | -1.69E-46 |
| MS.gene055412 | MS.gene50721 | 0.809853 | 1.54E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene50721 | 0.814219 | 1.72E-51 | -1.69E-46 |
| MS.gene055666 | MS.gene50721 | 0.808494 | 3.01E-50 | -1.69E-46 |
| MS.gene055802 | MS.gene50721 | 0.806875 | 6.65E-50 | -1.69E-46 |
| MS.gene056410 | MS.gene50721 | 0.819399 | 1.19E-52 | -1.69E-46 |
| MS.gene056611 | MS.gene50721 | 0.808001 | 3.84E-50 | -1.69E-46 |
| MS.gene056659 | MS.gene50721 | 0.817271 | 3.60E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene50721 | 0.80645 | 8.18E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene50721 | 0.804514 | 2.08E-49 | -1.69E-46 |
| MS.gene05806 | MS.gene50721 | 0.834241 | 3.36E-56 | -1.69E-46 |
| MS.gene058082 | MS.gene50721 | 0.819685 | 1.02E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene50721 | 0.801108 | 1.05E-48 | -1.69E-46 |
| MS.gene058120 | MS.gene50721 | 0.800421 | 1.45E-48 | -1.69E-46 |
| MS.gene058365 | MS.gene50721 | 0.819327 | 1.23E-52 | -1.69E-46 |
| MS.gene058948 | MS.gene50721 | 0.844505 | 7.25E-59 | -1.69E-46 |
| MS.gene059674 | MS.gene50721 | 0.819242 | 1.29E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene50721 | 0.80849 | 3.02E-50 | -1.69E-46 |
| MS.gene059680 | MS.gene50721 | 0.804234 | 2.38E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene50721 | 0.842473 | 2.53E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene50721 | 0.844464 | 7.44E-59 | -1.69E-46 |
| MS.gene059695 | MS.gene50721 | 0.84834 | 6.52E-60 | -1.69E-46 |
| MS.gene059711 | MS.gene50721 | 0.864638 | 1.05E-64 | -1.69E-46 |
| MS.gene05986 | MS.gene50721 | 0.821047 | 4.97E-53 | -1.69E-46 |
| MS.gene059974 | MS.gene50721 | 0.850323 | 1.83E-60 | -1.69E-46 |
| MS.gene060356 | MS.gene50721 | 0.816584 | 5.13E-52 | -1.69E-46 |
| MS.gene06037 | MS.gene50721 | 0.813299 | 2.75E-51 | -1.69E-46 |
| MS.gene060469 | MS.gene50721 | 0.807565 | 4.75E-50 | -1.69E-46 |
| MS.gene060569 | MS.gene50721 | 0.869925 | 2.15E-66 | -1.69E-46 |
| MS.gene060837 | MS.gene50721 | 0.845859 | 3.12E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50721.t1 | MTR_4g071445 | 95.281 | 445 | 19 | 1 | 1 | 443 | 1 | 445 | 0.0 | 823 |
| MS.gene50721.t1 | MTR_4g071465 | 92.325 | 443 | 31 | 1 | 1 | 443 | 1 | 440 | 0.0 | 791 |
| MS.gene50721.t1 | MTR_4g071420 | 79.425 | 452 | 80 | 4 | 1 | 443 | 1 | 448 | 0.0 | 687 |
| MS.gene50721.t1 | MTR_4g071420 | 78.973 | 409 | 73 | 4 | 1 | 400 | 1 | 405 | 0.0 | 623 |
| MS.gene50721.t1 | MTR_4g071390 | 66.368 | 446 | 135 | 5 | 1 | 443 | 1 | 434 | 0.0 | 578 |
| MS.gene50721.t1 | MTR_4g071370 | 72.040 | 397 | 107 | 1 | 57 | 449 | 57 | 453 | 0.0 | 577 |
| MS.gene50721.t1 | MTR_4g071370 | 72.634 | 391 | 103 | 1 | 57 | 443 | 57 | 447 | 0.0 | 576 |
| MS.gene50721.t1 | MTR_4g071370 | 72.634 | 391 | 103 | 1 | 57 | 443 | 57 | 447 | 0.0 | 575 |
| MS.gene50721.t1 | MTR_5g099020 | 25.118 | 422 | 253 | 15 | 71 | 459 | 83 | 474 | 7.54e-17 | 84.3 |
| MS.gene50721.t1 | MTR_5g099020 | 25.118 | 422 | 253 | 15 | 71 | 459 | 83 | 474 | 8.39e-17 | 84.0 |
| MS.gene50721.t1 | MTR_2g097900 | 24.093 | 386 | 239 | 8 | 104 | 442 | 36 | 414 | 9.91e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50721.t1 | AT2G21340 | 64.677 | 402 | 127 | 2 | 57 | 443 | 55 | 456 | 0.0 | 531 |
| MS.gene50721.t1 | AT2G21340 | 64.179 | 402 | 126 | 3 | 57 | 443 | 55 | 453 | 0.0 | 521 |
| MS.gene50721.t1 | AT4G39030 | 67.236 | 351 | 115 | 0 | 93 | 443 | 89 | 439 | 1.20e-170 | 495 |
| MS.gene50721.t1 | AT2G38330 | 25.435 | 460 | 302 | 12 | 15 | 459 | 6 | 439 | 3.44e-19 | 91.3 |
| MS.gene50721.t1 | AT4G38380 | 24.229 | 454 | 288 | 15 | 27 | 450 | 32 | 459 | 4.54e-16 | 81.6 |
| MS.gene50721.t1 | AT4G38380 | 23.922 | 464 | 287 | 16 | 27 | 450 | 32 | 469 | 1.69e-15 | 80.1 |
| MS.gene50721.t1 | AT4G38380 | 23.922 | 464 | 287 | 16 | 27 | 450 | 32 | 469 | 1.69e-15 | 80.1 |
| MS.gene50721.t1 | AT4G38380 | 23.632 | 402 | 248 | 12 | 86 | 450 | 18 | 397 | 2.31e-11 | 66.6 |
Find 129 sgRNAs with CRISPR-Local
Find 423 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGGCCTTGTTTACTTAT+TGG | 0.177183 | 4.3:+33995272 | MS.gene50721:CDS |
| AGCTGTATTCGGGTTGCTTT+TGG | 0.197977 | 4.3:+33997206 | MS.gene50721:CDS |
| AAGGAAATTATTCTGTTTAC+TGG | 0.206301 | 4.3:+33993680 | MS.gene50721:CDS |
| TTTGAATGGTCTAGTATTAT+TGG | 0.209178 | 4.3:+33998543 | MS.gene50721:CDS |
| CCCTCCAGGCCGACTGTTGC+AGG | 0.218536 | 4.3:-33997445 | None:intergenic |
| CTGGACCTGCTATTGGTCTT+TGG | 0.222999 | 4.3:+33993699 | MS.gene50721:CDS |
| CTAACTATTGGAGCTGTATT+CGG | 0.232506 | 4.3:+33997195 | MS.gene50721:CDS |
| GCCACTGGGGTATAGTTATT+TGG | 0.233210 | 4.3:+33999108 | MS.gene50721:CDS |
| ATCGATTGCTACTTCGAATA+TGG | 0.233585 | 4.3:+33993927 | MS.gene50721:CDS |
| CTGTTTACTGGACCTGCTAT+TGG | 0.241419 | 4.3:+33993692 | MS.gene50721:CDS |
| GCTGCTGCCAGTATTATAAA+TGG | 0.247426 | 4.3:+33995859 | MS.gene50721:CDS |
| ATTTGTGACATTGATGTTAA+AGG | 0.250101 | 4.3:+33996527 | MS.gene50721:CDS |
| CTAAGGTCTCTTCTAACTAT+TGG | 0.258425 | 4.3:+33997183 | MS.gene50721:CDS |
| CTGTGCAGATATTTAAACTA+TGG | 0.264751 | 4.3:+33995898 | MS.gene50721:CDS |
| TCGGAAACTGTGCGGGGAAA+TGG | 0.271411 | 4.3:+33999027 | MS.gene50721:CDS |
| ACCAATTCCATTTATAATAC+TGG | 0.285900 | 4.3:-33995866 | None:intergenic |
| TGCTACTGCCCTTGCTAAAC+AGG | 0.288099 | 4.3:+33993951 | MS.gene50721:CDS |
| GCATAAATGATTGGGCAGTT+TGG | 0.309238 | 4.3:-33996863 | None:intergenic |
| TAGAAGAAACCTCGCTGATT+TGG | 0.310022 | 4.3:-33993601 | None:intergenic |
| TTGGGGACCCTTGAAGGCTT+TGG | 0.310354 | 4.3:+33995837 | MS.gene50721:CDS |
| CGGAAACTGTGCGGGGAAAT+GGG | 0.313766 | 4.3:+33999028 | MS.gene50721:CDS |
| CATAAATGATTGGGCAGTTT+GGG | 0.318301 | 4.3:-33996862 | None:intergenic |
| ATGGGATCGCTGGGGCTGCA+TGG | 0.325681 | 4.3:+33995917 | MS.gene50721:CDS |
| TGGTAGTGTTCTTCCTTAGA+AGG | 0.328033 | 4.3:-33993463 | None:intergenic |
| CTCATTGATACTGCTGTTGT+TGG | 0.336581 | 4.3:+33993743 | MS.gene50721:CDS |
| AACTGGTTGAGCAGAGTATA+TGG | 0.336997 | 4.3:+33993648 | MS.gene50721:CDS |
| GTCTTGGTATGAAAGATTCT+TGG | 0.344370 | 4.3:+33995818 | MS.gene50721:intron |
| TAACTATTGGAGCTGTATTC+GGG | 0.354893 | 4.3:+33997196 | MS.gene50721:CDS |
| GTGATCAAGTGTGGTGCCAC+TGG | 0.372752 | 4.3:+33999093 | MS.gene50721:CDS |
| CAGATCCTATCCAGCAGATA+TGG | 0.375163 | 4.3:+33998647 | MS.gene50721:intron |
| GACAGGCTCGGTCGCTTCTA+AGG | 0.385164 | 4.3:+33997166 | MS.gene50721:intron |
| TAATGCATTGGTTTGTTGAA+TGG | 0.390169 | 4.3:-33993487 | None:intergenic |
| CGGCCTGGAGGGAACATTGC+TGG | 0.395766 | 4.3:+33997456 | MS.gene50721:CDS |
| TCTTGGTATGAAAGATTCTT+GGG | 0.396058 | 4.3:+33995819 | MS.gene50721:CDS |
| TTTCACTTGCTGGATTTCAA+TGG | 0.400259 | 4.3:+33998687 | MS.gene50721:CDS |
| TGGGATCGCTGGGGCTGCAT+GGG | 0.408841 | 4.3:+33995918 | MS.gene50721:CDS |
| GGCAGCAGCCAAAGCCTTCA+AGG | 0.419588 | 4.3:-33995845 | None:intergenic |
| TCAACTCAGGCATAAATGAT+TGG | 0.421244 | 4.3:-33996872 | None:intergenic |
| AACATCAATGTCACAAATAC+AGG | 0.423376 | 4.3:-33996522 | None:intergenic |
| TTTATAAGTTTGTCAATGAC+TGG | 0.429492 | 4.3:+33998511 | MS.gene50721:CDS |
| AGAAGAAGAAGTGAAGGAAC+TGG | 0.429921 | 4.3:+33993631 | MS.gene50721:CDS |
| TTCACTTGCTGGATTTCAAT+GGG | 0.432604 | 4.3:+33998688 | MS.gene50721:CDS |
| GTATGGAGTAAATCGGAGTT+TGG | 0.433384 | 4.3:+33996896 | MS.gene50721:CDS |
| GCCAGTATTATAAATGGAAT+TGG | 0.442168 | 4.3:+33995865 | MS.gene50721:CDS |
| TGGGAGATAGAAGGCGCAAA+AGG | 0.447433 | 4.3:-33998810 | None:intergenic |
| AGATTCTTGGGGACCCTTGA+AGG | 0.447575 | 4.3:+33995831 | MS.gene50721:CDS |
| ACCTGATCAGATGGTCATCC+AGG | 0.449016 | 4.3:+33997275 | MS.gene50721:CDS |
| CACACCTGCAACAGTCGGCC+TGG | 0.466186 | 4.3:+33997441 | MS.gene50721:CDS |
| TATTTAAACTATGGGATCGC+TGG | 0.466318 | 4.3:+33995907 | MS.gene50721:CDS |
| GGTACTAAATGTACATTCTT+CGG | 0.467102 | 4.3:-33994922 | None:intergenic |
| TCCTGGATGACCATCTGATC+AGG | 0.473180 | 4.3:-33997276 | None:intergenic |
| TTTATGCCTGAGTTGATGTA+TGG | 0.474513 | 4.3:+33996879 | MS.gene50721:CDS |
| AAGATATACGTTCAAGGCGG+TGG | 0.474818 | 4.3:-33999069 | None:intergenic |
| GCCTTGCAAACCATATCTGC+TGG | 0.476879 | 4.3:-33998657 | None:intergenic |
| TTTGCTCATGCAGGCTGGGC+GGG | 0.477622 | 4.3:+33998480 | MS.gene50721:intron |
| AAATGCCATTGGGAGATAGA+AGG | 0.478517 | 4.3:-33998819 | None:intergenic |
| TGTGCAGATATTTAAACTAT+GGG | 0.482960 | 4.3:+33995899 | MS.gene50721:CDS |
| TCAATTGAACTTGCTGCTCT+AGG | 0.485060 | 4.3:+33993776 | MS.gene50721:CDS |
| AGTTGTATCGGAAACTGTGC+GGG | 0.487415 | 4.3:+33999020 | MS.gene50721:CDS |
| TGGGGCTGCATGGGCTACAT+TGG | 0.491626 | 4.3:+33995927 | MS.gene50721:CDS |
| AGTTGATGTATGGAGTAAAT+CGG | 0.492680 | 4.3:+33996889 | MS.gene50721:CDS |
| TGCAGCTAATACTTATGTCC+AGG | 0.497257 | 4.3:+33994945 | MS.gene50721:CDS |
| TTGTTGTAACATCTGTTACT+TGG | 0.499431 | 4.3:+33997232 | MS.gene50721:CDS |
| CAACTCAGGCATAAATGATT+GGG | 0.499704 | 4.3:-33996871 | None:intergenic |
| CTGCAGGTGCTGAGTTGTAT+CGG | 0.500020 | 4.3:+33999008 | MS.gene50721:intron |
| TGATCAAGTGTGGTGCCACT+GGG | 0.500320 | 4.3:+33999094 | MS.gene50721:CDS |
| TTGGTGTTAGATTCGAGGGT+TGG | 0.502304 | 4.3:+33995250 | MS.gene50721:intron |
| TTCCGAGTATAAAATGCCAT+TGG | 0.504973 | 4.3:-33998830 | None:intergenic |
| TTTCCTTCACCATTCCTTCA+GGG | 0.508678 | 4.3:+33996466 | MS.gene50721:CDS |
| TCCGAGTATAAAATGCCATT+GGG | 0.511889 | 4.3:-33998829 | None:intergenic |
| GGAAACTGTGCGGGGAAATG+GGG | 0.518399 | 4.3:+33999029 | MS.gene50721:CDS |
| CTTCACCATTCCTTCAGGGA+AGG | 0.518414 | 4.3:+33996470 | MS.gene50721:CDS |
| ATTTAAACTATGGGATCGCT+GGG | 0.521866 | 4.3:+33995908 | MS.gene50721:CDS |
| GCAAACCATATCTGCTGGAT+AGG | 0.523619 | 4.3:-33998652 | None:intergenic |
| CCTGCAACAGTCGGCCTGGA+GGG | 0.530670 | 4.3:+33997445 | MS.gene50721:CDS |
| GAGTATATGGATTCAGATGA+AGG | 0.533192 | 4.3:+33993661 | MS.gene50721:CDS |
| ATCACAAAGATATACGTTCA+AGG | 0.539081 | 4.3:-33999075 | None:intergenic |
| GATTGGGCAGTTTGGGAGAG+AGG | 0.541089 | 4.3:-33996855 | None:intergenic |
| GAGCAAAGCTCTAAATGAGA+AGG | 0.541585 | 4.3:+33996431 | MS.gene50721:CDS |
| TTGCGCCTTCTATCTCCCAA+TGG | 0.545810 | 4.3:+33998814 | MS.gene50721:CDS |
| GTGTTCTTCCTTAGAAGGGA+AGG | 0.546012 | 4.3:-33993458 | None:intergenic |
| TTAGGCGCAACAACGCTAGC+AGG | 0.548010 | 4.3:+33994764 | MS.gene50721:CDS |
| TATGTTTGTGTAGGATAGGG+AGG | 0.548718 | 4.3:+33994664 | MS.gene50721:intron |
| AAATTCCTTCCCTGAAGGAA+TGG | 0.556149 | 4.3:-33996475 | None:intergenic |
| GTTAGATTCGAGGGTTGGCA+TGG | 0.557043 | 4.3:+33995255 | MS.gene50721:intron |
| TCCAGCAGATATGGTTTGCA+AGG | 0.560688 | 4.3:+33998656 | MS.gene50721:CDS |
| GACAGAAATTCCTTCCCTGA+AGG | 0.564886 | 4.3:-33996480 | None:intergenic |
| GCATTATTATATCCTCGAGC+AGG | 0.565045 | 4.3:+33993504 | MS.gene50721:CDS |
| GGTAGTGTTCTTCCTTAGAA+GGG | 0.565504 | 4.3:-33993462 | None:intergenic |
| GGGAGATAGAAGGCGCAAAA+GGG | 0.565655 | 4.3:-33998809 | None:intergenic |
| AAGAACAAACCTGTTTAGCA+AGG | 0.565978 | 4.3:-33993960 | None:intergenic |
| TCGAGGATATAATAATGCAT+TGG | 0.566810 | 4.3:-33993499 | None:intergenic |
| ATACCAGCAATGTTCCCTCC+AGG | 0.568305 | 4.3:-33997459 | None:intergenic |
| TATTGGGTTAGCATGTGGCT+CGG | 0.569231 | 4.3:+33994718 | MS.gene50721:CDS |
| GTTCTTCCTTAGAAGGGAAG+GGG | 0.570072 | 4.3:-33993456 | None:intergenic |
| GCTATTGGTCTTTGGTTATG+CGG | 0.571938 | 4.3:+33993707 | MS.gene50721:CDS |
| GAAACTGTGCGGGGAAATGG+GGG | 0.573752 | 4.3:+33999030 | MS.gene50721:CDS |
| GCAGCAGCCAAAGCCTTCAA+GGG | 0.575285 | 4.3:-33995844 | None:intergenic |
| GATATGGTTTGCAAGGCTGT+TGG | 0.577198 | 4.3:+33998663 | MS.gene50721:CDS |
| TGTTCTTCCTTAGAAGGGAA+GGG | 0.584017 | 4.3:-33993457 | None:intergenic |
| GCATTGGTTTGTTGAATGGA+TGG | 0.590335 | 4.3:-33993483 | None:intergenic |
| AGCAAAGCTCTAAATGAGAA+GGG | 0.592366 | 4.3:+33996432 | MS.gene50721:CDS |
| TGGACATAAGTATTAGCTGC+AGG | 0.592382 | 4.3:-33994943 | None:intergenic |
| CTTCCCTGAAGGAATGGTGA+AGG | 0.598270 | 4.3:-33996469 | None:intergenic |
| TTCTTCCTTAGAAGGGAAGG+GGG | 0.599216 | 4.3:-33993455 | None:intergenic |
| ACCTGCAACAGTCGGCCTGG+AGG | 0.603468 | 4.3:+33997444 | MS.gene50721:CDS |
| ATTTGCTCATGCAGGCTGGG+CGG | 0.603806 | 4.3:+33998479 | MS.gene50721:intron |
| GATCGATTGCTCAAAGTGCA+AGG | 0.606336 | 4.3:+33995294 | MS.gene50721:CDS |
| GATACTGCTGTTGTTGGTCA+AGG | 0.613645 | 4.3:+33993749 | MS.gene50721:CDS |
| CATAACCAAAGACCAATAGC+AGG | 0.617530 | 4.3:-33993704 | None:intergenic |
| GGAGGAAACGAAGAGGTGCG+TGG | 0.621216 | 4.3:-33993433 | None:intergenic |
| AGAACAAACCTGTTTAGCAA+GGG | 0.621535 | 4.3:-33993959 | None:intergenic |
| AGTAAATCGGAGTTTGGCAA+AGG | 0.624488 | 4.3:+33996902 | MS.gene50721:CDS |
| TACATGTTATGCGCAATATG+TGG | 0.626684 | 4.3:+33996828 | MS.gene50721:CDS |
| TTTACTCCATACATCAACTC+AGG | 0.632825 | 4.3:-33996885 | None:intergenic |
| GAAGCGACTGTTCCTGCTCG+AGG | 0.643099 | 4.3:-33993516 | None:intergenic |
| ATCGATCCAATAAGTAAACA+AGG | 0.654105 | 4.3:-33995278 | None:intergenic |
| TATATCTTTGTGATCAAGTG+TGG | 0.669008 | 4.3:+33999084 | MS.gene50721:CDS |
| TCTTCCTTAGAAGGGAAGGG+GGG | 0.669820 | 4.3:-33993454 | None:intergenic |
| CTTGGTATGAAAGATTCTTG+GGG | 0.676112 | 4.3:+33995820 | MS.gene50721:CDS |
| CTGGTCACACCTGCAACAGT+CGG | 0.690613 | 4.3:+33997436 | MS.gene50721:CDS |
| GAGTTGTATCGGAAACTGTG+CGG | 0.703127 | 4.3:+33999019 | MS.gene50721:CDS |
| TGATCAGATGGTCATCCAGG+AGG | 0.712365 | 4.3:+33997278 | MS.gene50721:CDS |
| ACCAAATAACTATACCCCAG+TGG | 0.721142 | 4.3:-33999109 | None:intergenic |
| GTATCAATGAGACTCATCAA+CGG | 0.734956 | 4.3:-33993731 | None:intergenic |
| GTTGTATCGGAAACTGTGCG+GGG | 0.735175 | 4.3:+33999021 | MS.gene50721:CDS |
| GATCAAGTGTGGTGCCACTG+GGG | 0.737199 | 4.3:+33999095 | MS.gene50721:CDS |
| TTTAAACTATGGGATCGCTG+GGG | 0.771769 | 4.3:+33995909 | MS.gene50721:CDS |
| ACAAAGATATACGTTCAAGG+CGG | 0.792492 | 4.3:-33999072 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATCATAAAATAATTTA+TGG | + | chr4.3:33995039-33995058 | MS.gene50721:intron | 10.0% |
| !! | ATAATCTTAATTTAAATTGA+AGG | - | chr4.3:33994997-33995016 | None:intergenic | 10.0% |
| !! | ATATACATAAAACTACAATA+TGG | - | chr4.3:33997117-33997136 | None:intergenic | 15.0% |
| !! | TATATATTGAAATTGATCAA+AGG | + | chr4.3:33995185-33995204 | MS.gene50721:intron | 15.0% |
| !! | TTAATTATTGGTATCATATA+TGG | + | chr4.3:33996338-33996357 | MS.gene50721:intron | 15.0% |
| !! | TTTATTCTATATCATTAGTT+TGG | - | chr4.3:33994088-33994107 | None:intergenic | 15.0% |
| !! | TTTCTATCCAATTAAAAAAT+GGG | - | chr4.3:33993990-33994009 | None:intergenic | 15.0% |
| !!! | TATTTTAGTACATTGAAAAT+AGG | - | chr4.3:33996369-33996388 | None:intergenic | 15.0% |
| !!! | TTTCTTGTTATAGTAAATAA+AGG | + | chr4.3:33995088-33995107 | MS.gene50721:intron | 15.0% |
| !!! | TTTTCTATCCAATTAAAAAA+TGG | - | chr4.3:33993991-33994010 | None:intergenic | 15.0% |
| !!! | TTTTTAGTTTATGTTCAATT+TGG | + | chr4.3:33995415-33995434 | MS.gene50721:intron | 15.0% |
| !! | AAAACGATACTATATATATG+AGG | - | chr4.3:33996971-33996990 | None:intergenic | 20.0% |
| !! | AACAGTTTAAAGAACAATTT+AGG | - | chr4.3:33995629-33995648 | None:intergenic | 20.0% |
| !! | AATAATGCCAAAAAATTTAC+TGG | - | chr4.3:33994574-33994593 | None:intergenic | 20.0% |
| !! | AATTAAATTGTCATGAATGT+TGG | - | chr4.3:33998419-33998438 | None:intergenic | 20.0% |
| !! | AATTACTATTATCCCAAAAA+AGG | - | chr4.3:33994822-33994841 | None:intergenic | 20.0% |
| !! | ACATTGTAAACAAGTAATTA+GGG | + | chr4.3:33995983-33996002 | MS.gene50721:intron | 20.0% |
| !! | ATAATGAATGGAAAAGAATA+TGG | + | chr4.3:33997976-33997995 | MS.gene50721:intron | 20.0% |
| !! | ATCTACAATATGAATTAGTA+AGG | - | chr4.3:33997089-33997108 | None:intergenic | 20.0% |
| !! | ATTAAATTGTCATGAATGTT+GGG | - | chr4.3:33998418-33998437 | None:intergenic | 20.0% |
| !! | ATTACTATTATCCCAAAAAA+GGG | - | chr4.3:33994821-33994840 | None:intergenic | 20.0% |
| !! | ATTAGTTAATATGTTTGTGT+AGG | + | chr4.3:33994655-33994674 | MS.gene50721:intron | 20.0% |
| !! | CAAACATATTAACTAATCAA+AGG | - | chr4.3:33994652-33994671 | None:intergenic | 20.0% |
| !! | CACACATCATAATTAATTAT+TGG | + | chr4.3:33996326-33996345 | MS.gene50721:intron | 20.0% |
| !! | GAACTTTCAGTTATATTTAA+AGG | - | chr4.3:33996604-33996623 | None:intergenic | 20.0% |
| !! | TACATTGTAAACAAGTAATT+AGG | + | chr4.3:33995982-33996001 | MS.gene50721:intron | 20.0% |
| !! | TAGAATAAAGATAATTCGTA+TGG | + | chr4.3:33994099-33994118 | MS.gene50721:intron | 20.0% |
| !! | TCTCATTTAATTCATATTCT+TGG | + | chr4.3:33995775-33995794 | MS.gene50721:intron | 20.0% |
| !! | TTAAAATATGTTTGTGAGTT+TGG | - | chr4.3:33996776-33996795 | None:intergenic | 20.0% |
| !! | TTCAATTTGTCTATAATGAA+TGG | + | chr4.3:33997964-33997983 | MS.gene50721:intron | 20.0% |
| !! | TTGTATTAAGCTTACTAATT+AGG | + | chr4.3:33996221-33996240 | MS.gene50721:intron | 20.0% |
| !!! | ACTGTTTTTTGTGATTATTT+GGG | + | chr4.3:33993886-33993905 | MS.gene50721:CDS | 20.0% |
| !!! | AGTTGATTTTCATTTTATAG+AGG | + | chr4.3:33997010-33997029 | MS.gene50721:intron | 20.0% |
| !!! | ATATATTTTGCTACATCAAT+GGG | + | chr4.3:33996655-33996674 | MS.gene50721:CDS | 20.0% |
| !!! | CATTTTTATGCTAAAAATCT+AGG | - | chr4.3:33997583-33997602 | None:intergenic | 20.0% |
| !!! | CTTTATTCCCATTTTTTAAT+TGG | + | chr4.3:33993980-33993999 | MS.gene50721:intron | 20.0% |
| !!! | TACTGTTTTTTGTGATTATT+TGG | + | chr4.3:33993885-33993904 | MS.gene50721:CDS | 20.0% |
| !!! | TACTTTATTTAAAGAAGCAT+TGG | - | chr4.3:33995122-33995141 | None:intergenic | 20.0% |
| !!! | TATATATTTTGCTACATCAA+TGG | + | chr4.3:33996654-33996673 | MS.gene50721:CDS | 20.0% |
| !!! | TGTTAACAACTTTATCTTTT+AGG | - | chr4.3:33997817-33997836 | None:intergenic | 20.0% |
| !!! | TTATTTTAGTGTTCTTATGT+TGG | + | chr4.3:33997514-33997533 | MS.gene50721:intron | 20.0% |
| !!! | TTTAACTCAACTCTTATTTT+AGG | + | chr4.3:33996791-33996810 | MS.gene50721:intron | 20.0% |
| ! | AAGGAAATTATTCTGTTTAC+TGG | + | chr4.3:33993680-33993699 | MS.gene50721:CDS | 25.0% |
| ! | AAGTACATATACATAAGAAG+CGG | - | chr4.3:33998071-33998090 | None:intergenic | 25.0% |
| ! | AATGTACCATGAACTAAAAA+AGG | - | chr4.3:33998908-33998927 | None:intergenic | 25.0% |
| ! | ACATATTAACTAATCAAAGG+CGG | - | chr4.3:33994649-33994668 | None:intergenic | 25.0% |
| ! | ACCAATTCCATTTATAATAC+TGG | - | chr4.3:33995869-33995888 | None:intergenic | 25.0% |
| ! | ATTTGTGACATTGATGTTAA+AGG | + | chr4.3:33996527-33996546 | MS.gene50721:CDS | 25.0% |
| ! | CAAAACACGTTAAAACATTT+CGG | - | chr4.3:33996092-33996111 | None:intergenic | 25.0% |
| ! | CAGAAAGAAAAAAAAAAACC+TGG | - | chr4.3:33994966-33994985 | None:intergenic | 25.0% |
| ! | CATATTGTGTTTATTAGGTT+CGG | + | chr4.3:33998776-33998795 | MS.gene50721:intron | 25.0% |
| ! | CTTTATATCAAAAGTCTTTC+TGG | + | chr4.3:33994259-33994278 | MS.gene50721:intron | 25.0% |
| ! | GGCACATAATATGTAAATAT+TGG | + | chr4.3:33996011-33996030 | MS.gene50721:intron | 25.0% |
| ! | GTAATTCACTAATGCATAAA+TGG | + | chr4.3:33994836-33994855 | MS.gene50721:intron | 25.0% |
| ! | TAATATGTTTGTGTAGGATA+GGG | + | chr4.3:33994661-33994680 | MS.gene50721:intron | 25.0% |
| ! | TACTATATATATGAGGTTGA+AGG | - | chr4.3:33996964-33996983 | None:intergenic | 25.0% |
| ! | TATTGAAATTGATCAAAGGA+AGG | + | chr4.3:33995189-33995208 | MS.gene50721:intron | 25.0% |
| ! | TGAAATTGCACAATAATGTA+TGG | + | chr4.3:33993833-33993852 | MS.gene50721:intron | 25.0% |
| ! | TGTGCAGATATTTAAACTAT+GGG | + | chr4.3:33995899-33995918 | MS.gene50721:CDS | 25.0% |
| ! | TGTTAAGCATGTTACAAAAT+AGG | + | chr4.3:33998957-33998976 | MS.gene50721:intron | 25.0% |
| ! | TTAAATTGTCATGAATGTTG+GGG | - | chr4.3:33998417-33998436 | None:intergenic | 25.0% |
| ! | TTAATATGTTTGTGTAGGAT+AGG | + | chr4.3:33994660-33994679 | MS.gene50721:intron | 25.0% |
| ! | TTCTTACAAACTTAATCTCT+AGG | + | chr4.3:33998012-33998031 | MS.gene50721:intron | 25.0% |
| ! | TTTATAAGTTTGTCAATGAC+TGG | + | chr4.3:33998511-33998530 | MS.gene50721:CDS | 25.0% |
| ! | TTTGAATGGTCTAGTATTAT+TGG | + | chr4.3:33998543-33998562 | MS.gene50721:CDS | 25.0% |
| !! | AATTGAAGACTGCATAATTT+TGG | + | chr4.3:33998878-33998897 | MS.gene50721:intron | 25.0% |
| !! | ATTTAAAGCAATGCATGATT+AGG | + | chr4.3:33994506-33994525 | MS.gene50721:intron | 25.0% |
| !! | TAATAGTTGCTTGAAACTTT+TGG | + | chr4.3:33995453-33995472 | MS.gene50721:intron | 25.0% |
| !! | TAGTAACACTGAATTTCTTT+TGG | + | chr4.3:33995231-33995250 | MS.gene50721:intron | 25.0% |
| !! | TTCAGTGTTACTAAATTAAG+CGG | - | chr4.3:33995224-33995243 | None:intergenic | 25.0% |
| !!! | AATGTTTTAACGTGTTTTGA+AGG | + | chr4.3:33996093-33996112 | MS.gene50721:intron | 25.0% |
| !!! | ATATCTGTCTTGCTTTTTAT+TGG | + | chr4.3:33994701-33994720 | MS.gene50721:CDS | 25.0% |
| !!! | ATCTTTCTTTTTGGTTTGAA+GGG | + | chr4.3:33997036-33997055 | MS.gene50721:intron | 25.0% |
| !!! | CAAAAGACCAGTAAATTTTT+TGG | + | chr4.3:33994564-33994583 | MS.gene50721:intron | 25.0% |
| !!! | CTTAAAGGCATTATGTATAT+GGG | - | chr4.3:33998311-33998330 | None:intergenic | 25.0% |
| !!! | CTTTTTTTCACAAGGTTATT+AGG | + | chr4.3:33994746-33994765 | MS.gene50721:CDS | 25.0% |
| !!! | GTTGATTTTACAGGAAATAA+TGG | - | chr4.3:33997937-33997956 | None:intergenic | 25.0% |
| !!! | TATCTGTCTTGCTTTTTATT+GGG | + | chr4.3:33994702-33994721 | MS.gene50721:CDS | 25.0% |
| AAAAGAAGCCTTAATTCCAA+AGG | - | chr4.3:33997350-33997369 | None:intergenic | 30.0% | |
| AAACAAGTAATTAGGGTTGT+AGG | + | chr4.3:33995990-33996009 | MS.gene50721:intron | 30.0% | |
| AAAGCAGAATCCTATTTGAA+AGG | - | chr4.3:33995150-33995169 | None:intergenic | 30.0% | |
| AACATCAATGTCACAAATAC+AGG | - | chr4.3:33996525-33996544 | None:intergenic | 30.0% | |
| AAGCACATTAAACTATTCTC+AGG | - | chr4.3:33995671-33995690 | None:intergenic | 30.0% | |
| AAGTAGACAACCTTTCAAAT+AGG | + | chr4.3:33995137-33995156 | MS.gene50721:intron | 30.0% | |
| AATCCTAATCTGTTTCACAT+AGG | + | chr4.3:33997628-33997647 | MS.gene50721:intron | 30.0% | |
| AGAACAATTTAGGCATTAAG+AGG | - | chr4.3:33995619-33995638 | None:intergenic | 30.0% | |
| AGCACATTAAACTATTCTCA+GGG | - | chr4.3:33995670-33995689 | None:intergenic | 30.0% | |
| AGGGACATATTGTGTTTATT+AGG | + | chr4.3:33998771-33998790 | MS.gene50721:intron | 30.0% | |
| ATCACAAAGATATACGTTCA+AGG | - | chr4.3:33999078-33999097 | None:intergenic | 30.0% | |
| ATCGATCCAATAAGTAAACA+AGG | - | chr4.3:33995281-33995300 | None:intergenic | 30.0% | |
| ATGAATTAGTAAGGAGAACA+TGG | - | chr4.3:33997080-33997099 | None:intergenic | 30.0% | |
| ATTGAACAATTCATCAGTCA+TGG | - | chr4.3:33994876-33994895 | None:intergenic | 30.0% | |
| ATTGATGAATATGCGTGAAT+GGG | + | chr4.3:33994012-33994031 | MS.gene50721:intron | 30.0% | |
| CAGAGCTACTAAATAGTTAA+GGG | - | chr4.3:33997772-33997791 | None:intergenic | 30.0% | |
| CCATATACATAATGCCTTTA+AGG | + | chr4.3:33998309-33998328 | MS.gene50721:intron | 30.0% | |
| CTACTAAATAGTTAAGGGTT+AGG | - | chr4.3:33997767-33997786 | None:intergenic | 30.0% | |
| CTGTGCAGATATTTAAACTA+TGG | + | chr4.3:33995898-33995917 | MS.gene50721:CDS | 30.0% | |
| GAGATTAAGTTTGTAAGAAG+TGG | - | chr4.3:33998011-33998030 | None:intergenic | 30.0% | |
| GATAAAGTTGTTAACAAGAC+AGG | + | chr4.3:33997821-33997840 | MS.gene50721:intron | 30.0% | |
| GCCAGTATTATAAATGGAAT+TGG | + | chr4.3:33995865-33995884 | MS.gene50721:CDS | 30.0% | |
| GGTACTAAATGTACATTCTT+CGG | - | chr4.3:33994925-33994944 | None:intergenic | 30.0% | |
| GTATACTATTGAGTGACAAA+AGG | - | chr4.3:33995525-33995544 | None:intergenic | 30.0% | |
| TAATCACAAAAAACAGTAGC+AGG | - | chr4.3:33993883-33993902 | None:intergenic | 30.0% | |
| TACATTGTCGTTACAACTAA+CGG | - | chr4.3:33998176-33998195 | None:intergenic | 30.0% | |
| TAGCACTTTCTATGAATTCT+AGG | - | chr4.3:33998725-33998744 | None:intergenic | 30.0% | |
| TATATCTTTGTGATCAAGTG+TGG | + | chr4.3:33999084-33999103 | MS.gene50721:CDS | 30.0% | |
| TATCTGAGAAAAGTCATTCA+TGG | - | chr4.3:33995494-33995513 | None:intergenic | 30.0% | |
| TATTGATGAATATGCGTGAA+TGG | + | chr4.3:33994011-33994030 | MS.gene50721:intron | 30.0% | |
| TCATGTTCGATTGGAATATT+AGG | + | chr4.3:33997484-33997503 | MS.gene50721:intron | 30.0% | |
| TCGAGGATATAATAATGCAT+TGG | - | chr4.3:33993502-33993521 | None:intergenic | 30.0% | |
| TCTTGGTATGAAAGATTCTT+GGG | + | chr4.3:33995819-33995838 | MS.gene50721:CDS | 30.0% | |
| TGAGTTTATAGTATCTTGAC+AGG | + | chr4.3:33997149-33997168 | MS.gene50721:intron | 30.0% | |
| TGATCAGGTGTAAAAATGTA+GGG | - | chr4.3:33997264-33997283 | None:intergenic | 30.0% | |
| TGTAACGACAATGTAAGTAT+AGG | + | chr4.3:33998181-33998200 | MS.gene50721:intron | 30.0% | |
| TGTCAAGATACTATAAACTC+AGG | - | chr4.3:33997150-33997169 | None:intergenic | 30.0% | |
| TGTTTAAAGACTTCCTTACA+TGG | + | chr4.3:33998036-33998055 | MS.gene50721:intron | 30.0% | |
| TTATGCTAAAAATCTAGGTC+AGG | - | chr4.3:33997578-33997597 | None:intergenic | 30.0% | |
| TTCCTGTAAAATCAACAGTT+TGG | + | chr4.3:33997941-33997960 | MS.gene50721:intron | 30.0% | |
| TTGAACAATTCATCAGTCAT+GGG | - | chr4.3:33994875-33994894 | None:intergenic | 30.0% | |
| TTGTCATTGTTGGATGTATA+CGG | - | chr4.3:33994472-33994491 | None:intergenic | 30.0% | |
| TTGTTGTAACATCTGTTACT+TGG | + | chr4.3:33997232-33997251 | MS.gene50721:CDS | 30.0% | |
| TTTGGATTATAGAATCCGAA+CGG | - | chr4.3:33996138-33996157 | None:intergenic | 30.0% | |
| ! | AATATAGAAGCTTTAGCTCA+TGG | - | chr4.3:33996247-33996266 | None:intergenic | 30.0% |
| ! | AGTCTCATATCGACTATAAA+AGG | + | chr4.3:33998256-33998275 | MS.gene50721:intron | 30.0% |
| ! | AGTTGATGTATGGAGTAAAT+CGG | + | chr4.3:33996889-33996908 | MS.gene50721:CDS | 30.0% |
| ! | ATAAGTTTGTTCGCATACTT+GGG | - | chr4.3:33995956-33995975 | None:intergenic | 30.0% |
| ! | ATCAAAAGTCTTTCTGGTAA+TGG | + | chr4.3:33994265-33994284 | MS.gene50721:intron | 30.0% |
| ! | GCACAATAATGTATGGATTT+TGG | + | chr4.3:33993840-33993859 | MS.gene50721:intron | 30.0% |
| ! | TAGAGGATCATCTTTCTTTT+TGG | + | chr4.3:33997027-33997046 | MS.gene50721:intron | 30.0% |
| ! | TATAAGTTTGTTCGCATACT+TGG | - | chr4.3:33995957-33995976 | None:intergenic | 30.0% |
| !! | ATTAGGATTTTCAAGAAGCT+TGG | - | chr4.3:33997617-33997636 | None:intergenic | 30.0% |
| !! | CCTTAAAGGCATTATGTATA+TGG | - | chr4.3:33998312-33998331 | None:intergenic | 30.0% |
| !! | TAATGCATTGGTTTGTTGAA+TGG | - | chr4.3:33993490-33993509 | None:intergenic | 30.0% |
| !! | TATTGGTAACAACTTTTCCT+TGG | + | chr4.3:33998560-33998579 | MS.gene50721:intron | 30.0% |
| !! | TTATTAGGTTCGGTTTTCAT+CGG | + | chr4.3:33998786-33998805 | MS.gene50721:intron | 30.0% |
| !!! | AACCAAACTGTTGATTTTAC+AGG | - | chr4.3:33997946-33997965 | None:intergenic | 30.0% |
| !!! | ACATAATGCCTTTAAGGTTT+TGG | + | chr4.3:33998315-33998334 | MS.gene50721:intron | 30.0% |
| !!! | ACGTGTTTTGAAGGTTTTTA+TGG | + | chr4.3:33996102-33996121 | MS.gene50721:intron | 30.0% |
| !!! | CATCTTTCTTTTTGGTTTGA+AGG | + | chr4.3:33997035-33997054 | MS.gene50721:intron | 30.0% |
| !!! | CGTGTTTTGAAGGTTTTTAT+GGG | + | chr4.3:33996103-33996122 | MS.gene50721:intron | 30.0% |
| !!! | GTGTTTTGAAGGTTTTTATG+GGG | + | chr4.3:33996104-33996123 | MS.gene50721:intron | 30.0% |
| AAAAAATGTGAGTGTGACCT+TGG | + | chr4.3:33994333-33994352 | MS.gene50721:intron | 35.0% | |
| AAAAGAAGCAACATGCAACA+TGG | - | chr4.3:33998449-33998468 | None:intergenic | 35.0% | |
| AAAGCAATAGTTTACTCCTC+AGG | - | chr4.3:33995718-33995737 | None:intergenic | 35.0% | |
| AAATTCAAGAACTAACCTCC+TGG | - | chr4.3:33997296-33997315 | None:intergenic | 35.0% | |
| AAGAACAAACCTGTTTAGCA+AGG | - | chr4.3:33993963-33993982 | None:intergenic | 35.0% | |
| AAGCAATAGTTTACTCCTCA+GGG | - | chr4.3:33995717-33995736 | None:intergenic | 35.0% | |
| AAGTTGTGTGCATAAAGTCA+TGG | - | chr4.3:33994612-33994631 | None:intergenic | 35.0% | |
| ACAAAGATATACGTTCAAGG+CGG | - | chr4.3:33999075-33999094 | None:intergenic | 35.0% | |
| ACATATACATAAGAAGCGGT+TGG | - | chr4.3:33998067-33998086 | None:intergenic | 35.0% | |
| ACCAGTAGTGCTAAAAAGAA+TGG | - | chr4.3:33997421-33997440 | None:intergenic | 35.0% | |
| AGAACAAACCTGTTTAGCAA+GGG | - | chr4.3:33993962-33993981 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGAAGTGA+AGG | + | chr4.3:33993625-33993644 | MS.gene50721:CDS | 35.0% | |
| AGAGTTACAAAACACAAGAC+AGG | - | chr4.3:33996718-33996737 | None:intergenic | 35.0% | |
| AGCTTGTATTCAAATGTGAG+TGG | + | chr4.3:33994036-33994055 | MS.gene50721:intron | 35.0% | |
| AGGAGTAAGCCTACTTATTT+CGG | + | chr4.3:33997721-33997740 | MS.gene50721:intron | 35.0% | |
| ATCTCCATCCAAAACCTTAA+AGG | - | chr4.3:33998326-33998345 | None:intergenic | 35.0% | |
| ATTTAAACTATGGGATCGCT+GGG | + | chr4.3:33995908-33995927 | MS.gene50721:CDS | 35.0% | |
| CAACTCAGGCATAAATGATT+GGG | - | chr4.3:33996874-33996893 | None:intergenic | 35.0% | |
| CATAAATGATTGGGCAGTTT+GGG | - | chr4.3:33996865-33996884 | None:intergenic | 35.0% | |
| CCTACTTATTTCGGTAGAAT+GGG | + | chr4.3:33997730-33997749 | MS.gene50721:intron | 35.0% | |
| CTAACTATTGGAGCTGTATT+CGG | + | chr4.3:33997195-33997214 | MS.gene50721:CDS | 35.0% | |
| CTAAGGTCTCTTCTAACTAT+TGG | + | chr4.3:33997183-33997202 | MS.gene50721:CDS | 35.0% | |
| CTGATCAGGTGTAAAAATGT+AGG | - | chr4.3:33997265-33997284 | None:intergenic | 35.0% | |
| CTTGGTATGAAAGATTCTTG+GGG | + | chr4.3:33995820-33995839 | MS.gene50721:CDS | 35.0% | |
| GAAAATTTCACTGTCTCCTT+TGG | + | chr4.3:33997331-33997350 | MS.gene50721:intron | 35.0% | |
| GAACCTATGTGAAACAGATT+AGG | - | chr4.3:33997634-33997653 | None:intergenic | 35.0% | |
| GACTTTATGCACACAACTTT+AGG | + | chr4.3:33994613-33994632 | MS.gene50721:intron | 35.0% | |
| GAGTATATGGATTCAGATGA+AGG | + | chr4.3:33993661-33993680 | MS.gene50721:CDS | 35.0% | |
| GATCAGGTGTAAAAATGTAG+GGG | - | chr4.3:33997263-33997282 | None:intergenic | 35.0% | |
| GCAGAGCTACTAAATAGTTA+AGG | - | chr4.3:33997773-33997792 | None:intergenic | 35.0% | |
| GTATCAATGAGACTCATCAA+CGG | - | chr4.3:33993734-33993753 | None:intergenic | 35.0% | |
| GTCTTGGTATGAAAGATTCT+TGG | + | chr4.3:33995818-33995837 | MS.gene50721:intron | 35.0% | |
| TAACTATTGGAGCTGTATTC+GGG | + | chr4.3:33997196-33997215 | MS.gene50721:CDS | 35.0% | |
| TACATGTTATGCGCAATATG+TGG | + | chr4.3:33996828-33996847 | MS.gene50721:CDS | 35.0% | |
| TATTTAAACTATGGGATCGC+TGG | + | chr4.3:33995907-33995926 | MS.gene50721:CDS | 35.0% | |
| TCAACTCAGGCATAAATGAT+TGG | - | chr4.3:33996875-33996894 | None:intergenic | 35.0% | |
| TCCGAGTATAAAATGCCATT+GGG | - | chr4.3:33998832-33998851 | None:intergenic | 35.0% | |
| TGAAATAGTCTTTGCGATTG+AGG | + | chr4.3:33997689-33997708 | MS.gene50721:intron | 35.0% | |
| TGAACAATTCATCAGTCATG+GGG | - | chr4.3:33994874-33994893 | None:intergenic | 35.0% | |
| TGGTCTTTGTAGTTCATGAT+TGG | + | chr4.3:33994159-33994178 | MS.gene50721:intron | 35.0% | |
| TGTCATTGTTGGATGTATAC+GGG | - | chr4.3:33994471-33994490 | None:intergenic | 35.0% | |
| TTATAGTATCTTGACAGGCT+CGG | + | chr4.3:33997154-33997173 | MS.gene50721:intron | 35.0% | |
| TTCCGAGTATAAAATGCCAT+TGG | - | chr4.3:33998833-33998852 | None:intergenic | 35.0% | |
| TTCGTATGGCTAATGATCTT+AGG | + | chr4.3:33994113-33994132 | MS.gene50721:intron | 35.0% | |
| TTCGTGAACATATTCTGACA+GGG | + | chr4.3:33998752-33998771 | MS.gene50721:intron | 35.0% | |
| TTGTGATTATGCAGATGCAT+AGG | + | chr4.3:33997386-33997405 | MS.gene50721:intron | 35.0% | |
| TTGTGTATATTTGCTCATGC+AGG | + | chr4.3:33998471-33998490 | MS.gene50721:intron | 35.0% | |
| TTTACTCCATACATCAACTC+AGG | - | chr4.3:33996888-33996907 | None:intergenic | 35.0% | |
| TTTCGTGAACATATTCTGAC+AGG | + | chr4.3:33998751-33998770 | MS.gene50721:intron | 35.0% | |
| ! | AACTGAAAGTTCTGATGTGT+AGG | + | chr4.3:33996612-33996631 | MS.gene50721:intron | 35.0% |
| ! | AGTGTTACTAAATTAAGCGG+AGG | - | chr4.3:33995221-33995240 | None:intergenic | 35.0% |
| ! | ATCGATTGCTACTTCGAATA+TGG | + | chr4.3:33993927-33993946 | MS.gene50721:CDS | 35.0% |
| ! | ATGACTTTTCTCAGATAGCA+AGG | + | chr4.3:33995497-33995516 | MS.gene50721:intron | 35.0% |
| ! | CATTTTTACACCTGATCAGA+TGG | + | chr4.3:33997266-33997285 | MS.gene50721:CDS | 35.0% |
| ! | GGAATTAAGGCTTCTTTTAG+TGG | + | chr4.3:33997352-33997371 | MS.gene50721:intron | 35.0% |
| ! | GGCTAATGATCTTAGGTTTT+GGG | + | chr4.3:33994120-33994139 | MS.gene50721:intron | 35.0% |
| ! | TCCAACAATGACAAAAGCAT+AGG | + | chr4.3:33994478-33994497 | MS.gene50721:intron | 35.0% |
| ! | TCCCAATGGCATTTTATACT+CGG | + | chr4.3:33998828-33998847 | MS.gene50721:CDS | 35.0% |
| ! | TCCTATGCTTTTGTCATTGT+TGG | - | chr4.3:33994482-33994501 | None:intergenic | 35.0% |
| ! | TCTTTCTAGCAGTGCAATTA+GGG | + | chr4.3:33998142-33998161 | MS.gene50721:intron | 35.0% |
| ! | TGGCTAATGATCTTAGGTTT+TGG | + | chr4.3:33994119-33994138 | MS.gene50721:intron | 35.0% |
| ! | TTCACTTGCTGGATTTCAAT+GGG | + | chr4.3:33998688-33998707 | MS.gene50721:CDS | 35.0% |
| ! | TTTCACTTGCTGGATTTCAA+TGG | + | chr4.3:33998687-33998706 | MS.gene50721:CDS | 35.0% |
| !! | ACTGGATGCTTTTGTTTGAA+TGG | + | chr4.3:33998529-33998548 | MS.gene50721:CDS | 35.0% |
| !! | AGCAAAGCTCTAAATGAGAA+GGG | + | chr4.3:33996432-33996451 | MS.gene50721:CDS | 35.0% |
| !! | TCCATTCTTTTTAGCACTAC+TGG | + | chr4.3:33997417-33997436 | MS.gene50721:CDS | 35.0% |
| !! | TCTTTTAGGAGAACTGATCT+TGG | - | chr4.3:33997803-33997822 | None:intergenic | 35.0% |
| !! | TGTTGGTAGTGTTATTCAGT+TGG | + | chr4.3:33997531-33997550 | MS.gene50721:intron | 35.0% |
| !! | TTTATGCCTGAGTTGATGTA+TGG | + | chr4.3:33996879-33996898 | MS.gene50721:CDS | 35.0% |
| !!! | AATGCCTTTAAGGTTTTGGA+TGG | + | chr4.3:33998319-33998338 | MS.gene50721:intron | 35.0% |
| !!! | ATTTTGGTTTCTACATGAGC+AGG | + | chr4.3:33993856-33993875 | MS.gene50721:intron | 35.0% |
| !!! | CGGATTTTAGAATCCGAATA+GGG | - | chr4.3:33996072-33996091 | None:intergenic | 35.0% |
| !!! | CTTATTTTAGGTCATGCTTC+AGG | + | chr4.3:33996803-33996822 | MS.gene50721:intron | 35.0% |
| !!! | CTTTTTATTGGGTTAGCATG+TGG | + | chr4.3:33994713-33994732 | MS.gene50721:CDS | 35.0% |
| !!! | GCTGATTTGGTCTTTTTCTT+CGG | - | chr4.3:33993591-33993610 | None:intergenic | 35.0% |
| !!! | TAATGATCTTAGGTTTTGGG+TGG | + | chr4.3:33994123-33994142 | MS.gene50721:intron | 35.0% |
| !!! | TCGGATTTTAGAATCCGAAT+AGG | - | chr4.3:33996073-33996092 | None:intergenic | 35.0% |
| !!! | TCTTTTGGTGTTAGATTCGA+GGG | + | chr4.3:33995246-33995265 | MS.gene50721:intron | 35.0% |
| !!! | TTCTTTTGGTGTTAGATTCG+AGG | + | chr4.3:33995245-33995264 | MS.gene50721:intron | 35.0% |
| !!! | TTTTTGGGTTCAAATGTGAG+AGG | + | chr4.3:33998231-33998250 | MS.gene50721:intron | 35.0% |
| AAATGCCATTGGGAGATAGA+AGG | - | chr4.3:33998822-33998841 | None:intergenic | 40.0% | |
| AAATTCCTTCCCTGAAGGAA+TGG | - | chr4.3:33996478-33996497 | None:intergenic | 40.0% | |
| AACTGGTTGAGCAGAGTATA+TGG | + | chr4.3:33993648-33993667 | MS.gene50721:CDS | 40.0% | |
| AATGTGCAGATAGACAGCAA+AGG | - | chr4.3:33996744-33996763 | None:intergenic | 40.0% | |
| ACCAAATAACTATACCCCAG+TGG | - | chr4.3:33999112-33999131 | None:intergenic | 40.0% | |
| AGAAAAAGACCAAATCAGCG+AGG | + | chr4.3:33993592-33993611 | MS.gene50721:CDS | 40.0% | |
| AGAAGAAGAAGTGAAGGAAC+TGG | + | chr4.3:33993631-33993650 | MS.gene50721:CDS | 40.0% | |
| AGTAAATCGGAGTTTGGCAA+AGG | + | chr4.3:33996902-33996921 | MS.gene50721:CDS | 40.0% | |
| AGTTCAAAGTCTCACTTGTG+TGG | - | chr4.3:33994417-33994436 | None:intergenic | 40.0% | |
| AGTTCACTAGGTATATGCTC+TGG | - | chr4.3:33995694-33995713 | None:intergenic | 40.0% | |
| ATCAATAGGGTGGGAAAAGA+AGG | + | chr4.3:33996178-33996197 | MS.gene50721:intron | 40.0% | |
| CAACGATCCACTACTATGAT+CGG | - | chr4.3:33998113-33998132 | None:intergenic | 40.0% | |
| CATAACCAAAGACCAATAGC+AGG | - | chr4.3:33993707-33993726 | None:intergenic | 40.0% | |
| CCCATTCTACCGAAATAAGT+AGG | - | chr4.3:33997733-33997752 | None:intergenic | 40.0% | |
| CTCATTGATACTGCTGTTGT+TGG | + | chr4.3:33993743-33993762 | MS.gene50721:CDS | 40.0% | |
| GATCTGCATCGAGGTAAATT+GGG | - | chr4.3:33998633-33998652 | None:intergenic | 40.0% | |
| GCATAAATGATTGGGCAGTT+TGG | - | chr4.3:33996866-33996885 | None:intergenic | 40.0% | |
| GCATTATTATATCCTCGAGC+AGG | + | chr4.3:33993504-33993523 | MS.gene50721:CDS | 40.0% | |
| GCCTACTTATTTCGGTAGAA+TGG | + | chr4.3:33997729-33997748 | MS.gene50721:intron | 40.0% | |
| GCTGCTGCCAGTATTATAAA+TGG | + | chr4.3:33995859-33995878 | MS.gene50721:CDS | 40.0% | |
| GGATTTCAATGGGTAAGACT+CGG | + | chr4.3:33998698-33998717 | MS.gene50721:intron | 40.0% | |
| GGTAGTGTTCTTCCTTAGAA+GGG | - | chr4.3:33993465-33993484 | None:intergenic | 40.0% | |
| GTACTTTCATGATCCTACTC+AGG | + | chr4.3:33998085-33998104 | MS.gene50721:intron | 40.0% | |
| GTATGGAGTAAATCGGAGTT+TGG | + | chr4.3:33996896-33996915 | MS.gene50721:CDS | 40.0% | |
| TATATTTGCTCATGCAGGCT+GGG | + | chr4.3:33998476-33998495 | MS.gene50721:intron | 40.0% | |
| TATGTTTGTGTAGGATAGGG+AGG | + | chr4.3:33994664-33994683 | MS.gene50721:intron | 40.0% | |
| TCGCTCTTAGTTCAATGTGA+TGG | - | chr4.3:33994394-33994413 | None:intergenic | 40.0% | |
| TCTTGTTGGTCCATGACATT+GGG | + | chr4.3:33998360-33998379 | MS.gene50721:intron | 40.0% | |
| TGCACTGCTAGAAAGACTAT+GGG | - | chr4.3:33998138-33998157 | None:intergenic | 40.0% | |
| TGCAGCTAATACTTATGTCC+AGG | + | chr4.3:33994945-33994964 | MS.gene50721:CDS | 40.0% | |
| TGGACATAAGTATTAGCTGC+AGG | - | chr4.3:33994946-33994965 | None:intergenic | 40.0% | |
| TGTCGATACAATTCAGTGCT+TGG | + | chr4.3:33998982-33999001 | MS.gene50721:intron | 40.0% | |
| TGTTCTTCCTTAGAAGGGAA+GGG | - | chr4.3:33993460-33993479 | None:intergenic | 40.0% | |
| TTCCATGGAGCCTAAAACAA+TGG | + | chr4.3:33994362-33994381 | MS.gene50721:intron | 40.0% | |
| TTGCACTGCTAGAAAGACTA+TGG | - | chr4.3:33998139-33998158 | None:intergenic | 40.0% | |
| TTTAAACTATGGGATCGCTG+GGG | + | chr4.3:33995909-33995928 | MS.gene50721:CDS | 40.0% | |
| TTTCCTTCACCATTCCTTCA+GGG | + | chr4.3:33996466-33996485 | MS.gene50721:CDS | 40.0% | |
| ! | ACACTTGAGGGGGATATTTT+TGG | + | chr4.3:33998215-33998234 | MS.gene50721:intron | 40.0% |
| ! | ACAGGTTTGCATCGATAACT+CGG | + | chr4.3:33997839-33997858 | MS.gene50721:intron | 40.0% |
| ! | ATGCCTTTTGCAGCTTTTAC+TGG | + | chr4.3:33994898-33994917 | MS.gene50721:intron | 40.0% |
| ! | ATGGAGTCGTTGGTTAGTAA+TGG | + | chr4.3:33994284-33994303 | MS.gene50721:intron | 40.0% |
| ! | ATGGTCCACTCCATTGTTTT+AGG | - | chr4.3:33994375-33994394 | None:intergenic | 40.0% |
| ! | CACTTGAGGGGGATATTTTT+GGG | + | chr4.3:33998216-33998235 | MS.gene50721:intron | 40.0% |
| ! | GTCTTTCTAGCAGTGCAATT+AGG | + | chr4.3:33998141-33998160 | MS.gene50721:intron | 40.0% |
| ! | TAGAAGAAACCTCGCTGATT+TGG | - | chr4.3:33993604-33993623 | None:intergenic | 40.0% |
| ! | TCAATTTTTGCAGCTCAGAC+TGG | - | chr4.3:33998864-33998883 | None:intergenic | 40.0% |
| ! | TGAAAGTTCTGATGTGTAGG+TGG | + | chr4.3:33996615-33996634 | MS.gene50721:intron | 40.0% |
| ! | TGCGATTGAGGTGCTAAAAA+AGG | + | chr4.3:33997701-33997720 | MS.gene50721:intron | 40.0% |
| ! | TGGGTGGAAATGTAGTGTTT+TGG | + | chr4.3:33994139-33994158 | MS.gene50721:intron | 40.0% |
| ! | TGGTAGTGTTCTTCCTTAGA+AGG | - | chr4.3:33993466-33993485 | None:intergenic | 40.0% |
| ! | TTTTCCTTCACCATTCCTTC+AGG | + | chr4.3:33996465-33996484 | MS.gene50721:CDS | 40.0% |
| !! | CACTGTCTCCTTTGGAATTA+AGG | + | chr4.3:33997339-33997358 | MS.gene50721:intron | 40.0% |
| !! | GAGCAAAGCTCTAAATGAGA+AGG | + | chr4.3:33996431-33996450 | MS.gene50721:CDS | 40.0% |
| !! | GCATGGCCTTGTTTACTTAT+TGG | + | chr4.3:33995272-33995291 | MS.gene50721:CDS | 40.0% |
| !! | GCATTGGTTTGTTGAATGGA+TGG | - | chr4.3:33993486-33993505 | None:intergenic | 40.0% |
| !! | GCTATTGGTCTTTGGTTATG+CGG | + | chr4.3:33993707-33993726 | MS.gene50721:CDS | 40.0% |
| !! | TCAATTGAACTTGCTGCTCT+AGG | + | chr4.3:33993776-33993795 | MS.gene50721:CDS | 40.0% |
| !!! | ACAACTTTTCCTTGGTTTGC+TGG | + | chr4.3:33998568-33998587 | MS.gene50721:intron | 40.0% |
| !!! | GGAGCTCCTTTTTTAGTTCA+TGG | + | chr4.3:33998899-33998918 | MS.gene50721:intron | 40.0% |
| !!! | TAAGGTTTTGGATGGAGATC+TGG | + | chr4.3:33998327-33998346 | MS.gene50721:intron | 40.0% |
| !!! | TCCAGTTGTGTCCCTTTTTT+GGG | + | chr4.3:33994807-33994826 | MS.gene50721:intron | 40.0% |
| AAATGTGAGTGTGACCTTGG+TGG | + | chr4.3:33994336-33994355 | MS.gene50721:intron | 45.0% | |
| AAGATATACGTTCAAGGCGG+TGG | - | chr4.3:33999072-33999091 | None:intergenic | 45.0% | |
| ACGCGAGAAATCAATAGGGT+GGG | + | chr4.3:33996169-33996188 | MS.gene50721:intron | 45.0% | |
| AGAGCACGCGAGAAATCAAT+AGG | + | chr4.3:33996164-33996183 | MS.gene50721:intron | 45.0% | |
| AGTTGTATCGGAAACTGTGC+GGG | + | chr4.3:33999020-33999039 | MS.gene50721:CDS | 45.0% | |
| ATCCCAGTCCCCAAAACATA+GGG | - | chr4.3:33994201-33994220 | None:intergenic | 45.0% | |
| ATGTGAGACTCACACTTGAG+GGG | + | chr4.3:33998204-33998223 | MS.gene50721:intron | 45.0% | |
| ATTCAGTGCTTGGAAACTGC+AGG | + | chr4.3:33998992-33999011 | MS.gene50721:intron | 45.0% | |
| CAAAAACAGGCCCAATGTCA+TGG | - | chr4.3:33998373-33998392 | None:intergenic | 45.0% | |
| CAAGACTGCGTGAAAGAATG+TGG | - | chr4.3:33995804-33995823 | None:intergenic | 45.0% | |
| CAATTCATCAGTCATGGGGT+AGG | - | chr4.3:33994870-33994889 | None:intergenic | 45.0% | |
| CACATTCTTTCACGCAGTCT+TGG | + | chr4.3:33995802-33995821 | MS.gene50721:intron | 45.0% | |
| CAGATCCTATCCAGCAGATA+TGG | + | chr4.3:33998647-33998666 | MS.gene50721:intron | 45.0% | |
| CTATGTACACCAGCAAACCA+AGG | - | chr4.3:33998580-33998599 | None:intergenic | 45.0% | |
| CTCTTGTTGGTCCATGACAT+TGG | + | chr4.3:33998359-33998378 | MS.gene50721:intron | 45.0% | |
| CTGGTATCCTGATCTCTTGT+TGG | + | chr4.3:33998346-33998365 | MS.gene50721:intron | 45.0% | |
| CTGGTATGCTCATGTTCGAT+TGG | + | chr4.3:33997475-33997494 | MS.gene50721:intron | 45.0% | |
| CTGTTTACTGGACCTGCTAT+TGG | + | chr4.3:33993692-33993711 | MS.gene50721:CDS | 45.0% | |
| GACAGAAATTCCTTCCCTGA+AGG | - | chr4.3:33996483-33996502 | None:intergenic | 45.0% | |
| GAGCACGCGAGAAATCAATA+GGG | + | chr4.3:33996165-33996184 | MS.gene50721:intron | 45.0% | |
| GAGTTGTATCGGAAACTGTG+CGG | + | chr4.3:33999019-33999038 | MS.gene50721:CDS | 45.0% | |
| GATACTGCTGTTGTTGGTCA+AGG | + | chr4.3:33993749-33993768 | MS.gene50721:CDS | 45.0% | |
| GATCGATTGCTCAAAGTGCA+AGG | + | chr4.3:33995294-33995313 | MS.gene50721:CDS | 45.0% | |
| GATGTGAGACTCACACTTGA+GGG | + | chr4.3:33998203-33998222 | MS.gene50721:intron | 45.0% | |
| GCAAACCATATCTGCTGGAT+AGG | - | chr4.3:33998655-33998674 | None:intergenic | 45.0% | |
| GCCACTGGGGTATAGTTATT+TGG | + | chr4.3:33999108-33999127 | MS.gene50721:CDS | 45.0% | |
| GGATCTGCATCGAGGTAAAT+TGG | - | chr4.3:33998634-33998653 | None:intergenic | 45.0% | |
| GGATGTATACGGGTGTATAC+AGG | - | chr4.3:33994461-33994480 | None:intergenic | 45.0% | |
| GGTCCAGTAAAAGCTGCAAA+AGG | - | chr4.3:33994904-33994923 | None:intergenic | 45.0% | |
| GTATATTTGCTCATGCAGGC+TGG | + | chr4.3:33998475-33998494 | MS.gene50721:intron | 45.0% | |
| GTGTTCTTCCTTAGAAGGGA+AGG | - | chr4.3:33993461-33993480 | None:intergenic | 45.0% | |
| GTTCTTCCTTAGAAGGGAAG+GGG | - | chr4.3:33993459-33993478 | None:intergenic | 45.0% | |
| TAGGCATTAAGAGGAGAGAG+AGG | - | chr4.3:33995610-33995629 | None:intergenic | 45.0% | |
| TAGTAATGGCGGTGAGAGTA+CGG | + | chr4.3:33994298-33994317 | MS.gene50721:intron | 45.0% | |
| TATACCTAGTGAACTCCCTG+AGG | + | chr4.3:33995699-33995718 | MS.gene50721:intron | 45.0% | |
| TATGGGGTGTATATGCCGTT+CGG | + | chr4.3:33996120-33996139 | MS.gene50721:intron | 45.0% | |
| TCATGAATGTTGGGGAGTCT+GGG | - | chr4.3:33998409-33998428 | None:intergenic | 45.0% | |
| TCATGGACCAACAAGAGATC+AGG | - | chr4.3:33998356-33998375 | None:intergenic | 45.0% | |
| TCCCAAAAAAGGGACACAAC+TGG | - | chr4.3:33994811-33994830 | None:intergenic | 45.0% | |
| TCGTAGGGTGGGAAAAGTAA+TGG | - | chr4.3:33996037-33996056 | None:intergenic | 45.0% | |
| TGGAGCCTAAAACAATGGAG+TGG | + | chr4.3:33994367-33994386 | MS.gene50721:intron | 45.0% | |
| TTCTTCCTTAGAAGGGAAGG+GGG | - | chr4.3:33993458-33993477 | None:intergenic | 45.0% | |
| ! | CTGTTGCTCCCTATGTTTTG+GGG | + | chr4.3:33994190-33994209 | MS.gene50721:intron | 45.0% |
| ! | GAGTCGTTGGTTAGTAATGG+CGG | + | chr4.3:33994287-33994306 | MS.gene50721:intron | 45.0% |
| ! | GATATGGTTTGCAAGGCTGT+TGG | + | chr4.3:33998663-33998682 | MS.gene50721:CDS | 45.0% |
| ! | GCTGTTGCTCCCTATGTTTT+GGG | + | chr4.3:33994189-33994208 | MS.gene50721:intron | 45.0% |
| ! | GTTTGCATCGATAACTCGGA+GGG | + | chr4.3:33997843-33997862 | MS.gene50721:intron | 45.0% |
| ! | TCCAGCAGATATGGTTTGCA+AGG | + | chr4.3:33998656-33998675 | MS.gene50721:CDS | 45.0% |
| ! | TGCTGTTGCTCCCTATGTTT+TGG | + | chr4.3:33994188-33994207 | MS.gene50721:intron | 45.0% |
| !! | AAGTTAACTTGCCGAGAGAG+CGG | + | chr4.3:33994228-33994247 | MS.gene50721:intron | 45.0% |
| !! | ATCAACGTGCACTGCTTTTC+AGG | + | chr4.3:33996389-33996408 | MS.gene50721:intron | 45.0% |
| !! | CTTTCTGGTAATGGAGTCGT+TGG | + | chr4.3:33994274-33994293 | MS.gene50721:intron | 45.0% |
| !! | TATTGGGTTAGCATGTGGCT+CGG | + | chr4.3:33994718-33994737 | MS.gene50721:CDS | 45.0% |
| !! | TGAACTTGCTGCTCTAGGTA+TGG | + | chr4.3:33993781-33993800 | MS.gene50721:intron | 45.0% |
| !! | TTGGTGTTAGATTCGAGGGT+TGG | + | chr4.3:33995250-33995269 | MS.gene50721:intron | 45.0% |
| !!! | AGCTGTATTCGGGTTGCTTT+TGG | + | chr4.3:33997206-33997225 | MS.gene50721:CDS | 45.0% |
| !!! | CGGCGATGCTTTTTTTCACA+AGG | + | chr4.3:33994738-33994757 | MS.gene50721:CDS | 45.0% |
| !!! | CTCCATTGTTTTAGGCTCCA+TGG | - | chr4.3:33994367-33994386 | None:intergenic | 45.0% |
| !!! | CTGTATTCGGGTTGCTTTTG+GGG | + | chr4.3:33997208-33997227 | MS.gene50721:CDS | 45.0% |
| !!! | GCTGTATTCGGGTTGCTTTT+GGG | + | chr4.3:33997207-33997226 | MS.gene50721:CDS | 45.0% |
| !!! | GTCCAGTTGTGTCCCTTTTT+TGG | + | chr4.3:33994806-33994825 | MS.gene50721:intron | 45.0% |
| !! | ATTTAATAATATTATACTAT+TGG | + | chr4.3:33995750-33995769 | MS.gene50721:intron | 5.0% |
| !! | TTTAATAATATTATACTATT+GGG | + | chr4.3:33995751-33995770 | MS.gene50721:intron | 5.0% |
| AAGATCTACTCCCGCTCTCT+CGG | - | chr4.3:33994242-33994261 | None:intergenic | 50.0% | |
| ACCTGATCAGATGGTCATCC+AGG | + | chr4.3:33997275-33997294 | MS.gene50721:CDS | 50.0% | |
| ACTATGATCGGAGCCTGAGT+AGG | - | chr4.3:33998101-33998120 | None:intergenic | 50.0% | |
| AGATTCTTGGGGACCCTTGA+AGG | + | chr4.3:33995831-33995850 | MS.gene50721:CDS | 50.0% | |
| AGTTTCTCGGGTGCCCTATT+CGG | + | chr4.3:33996056-33996075 | MS.gene50721:intron | 50.0% | |
| ATACCAGCAATGTTCCCTCC+AGG | - | chr4.3:33997462-33997481 | None:intergenic | 50.0% | |
| ATGAATGTTGGGGAGTCTGG+GGG | - | chr4.3:33998407-33998426 | None:intergenic | 50.0% | |
| CACGCGAGAAATCAATAGGG+TGG | + | chr4.3:33996168-33996187 | MS.gene50721:intron | 50.0% | |
| CATGAATGTTGGGGAGTCTG+GGG | - | chr4.3:33998408-33998427 | None:intergenic | 50.0% | |
| CTTCACCATTCCTTCAGGGA+AGG | + | chr4.3:33996470-33996489 | MS.gene50721:CDS | 50.0% | |
| CTTCCCTGAAGGAATGGTGA+AGG | - | chr4.3:33996472-33996491 | None:intergenic | 50.0% | |
| GATCCCAGTCCCCAAAACAT+AGG | - | chr4.3:33994202-33994221 | None:intergenic | 50.0% | |
| GCCTTGCAAACCATATCTGC+TGG | - | chr4.3:33998660-33998679 | None:intergenic | 50.0% | |
| GCTCTCTCGGCAAGTTAACT+TGG | - | chr4.3:33994229-33994248 | None:intergenic | 50.0% | |
| GGAGCAACGAGAGCAAAAAC+AGG | - | chr4.3:33998386-33998405 | None:intergenic | 50.0% | |
| GGATGTGAGACTCACACTTG+AGG | + | chr4.3:33998202-33998221 | MS.gene50721:intron | 50.0% | |
| GTCATGAATGTTGGGGAGTC+TGG | - | chr4.3:33998410-33998429 | None:intergenic | 50.0% | |
| GTTGTATCGGAAACTGTGCG+GGG | + | chr4.3:33999021-33999040 | MS.gene50721:CDS | 50.0% | |
| TACTCCTCAGGGAGTTCACT+AGG | - | chr4.3:33995706-33995725 | None:intergenic | 50.0% | |
| TCAGGCTCCGATCATAGTAG+TGG | + | chr4.3:33998103-33998122 | MS.gene50721:intron | 50.0% | |
| TCCTGGATGACCATCTGATC+AGG | - | chr4.3:33997279-33997298 | None:intergenic | 50.0% | |
| TCTTCCTTAGAAGGGAAGGG+GGG | - | chr4.3:33993457-33993476 | None:intergenic | 50.0% | |
| TGATCAGATGGTCATCCAGG+AGG | + | chr4.3:33997278-33997297 | MS.gene50721:CDS | 50.0% | |
| TGCTACTGCCCTTGCTAAAC+AGG | + | chr4.3:33993951-33993970 | MS.gene50721:CDS | 50.0% | |
| TGTGAGACTCACACTTGAGG+GGG | + | chr4.3:33998205-33998224 | MS.gene50721:intron | 50.0% | |
| TTCCCACCCTACGAGTTTCT+CGG | + | chr4.3:33996043-33996062 | MS.gene50721:intron | 50.0% | |
| TTGCGCCTTCTATCTCCCAA+TGG | + | chr4.3:33998814-33998833 | MS.gene50721:CDS | 50.0% | |
| ! | GCGGTTGGTACTTCCATGTA+AGG | - | chr4.3:33998052-33998071 | None:intergenic | 50.0% |
| ! | GGGAGATAGAAGGCGCAAAA+GGG | - | chr4.3:33998812-33998831 | None:intergenic | 50.0% |
| ! | GGTTTGCATCGATAACTCGG+AGG | + | chr4.3:33997842-33997861 | MS.gene50721:intron | 50.0% |
| ! | GTTAGATTCGAGGGTTGGCA+TGG | + | chr4.3:33995255-33995274 | MS.gene50721:intron | 50.0% |
| ! | TGGGAGATAGAAGGCGCAAA+AGG | - | chr4.3:33998813-33998832 | None:intergenic | 50.0% |
| !! | AGTTAACTTGCCGAGAGAGC+GGG | + | chr4.3:33994229-33994248 | MS.gene50721:intron | 50.0% |
| !! | CTGCAGGTGCTGAGTTGTAT+CGG | + | chr4.3:33999008-33999027 | MS.gene50721:intron | 50.0% |
| !! | CTGGACCTGCTATTGGTCTT+TGG | + | chr4.3:33993699-33993718 | MS.gene50721:CDS | 50.0% |
| !! | TGATCAAGTGTGGTGCCACT+GGG | + | chr4.3:33999094-33999113 | MS.gene50721:CDS | 50.0% |
| !!! | CTCCCTATGTTTTGGGGACT+GGG | + | chr4.3:33994196-33994215 | MS.gene50721:intron | 50.0% |
| !!! | GGCTGTTGGTTTTCACTTGC+TGG | + | chr4.3:33998677-33998696 | MS.gene50721:CDS | 50.0% |
| ACCCGAGAAACTCGTAGGGT+GGG | - | chr4.3:33996048-33996067 | None:intergenic | 55.0% | |
| ATTTGCTCATGCAGGCTGGG+CGG | + | chr4.3:33998479-33998498 | MS.gene50721:intron | 55.0% | |
| CGGAAACTGTGCGGGGAAAT+GGG | + | chr4.3:33999028-33999047 | MS.gene50721:CDS | 55.0% | |
| CTGGTCACACCTGCAACAGT+CGG | + | chr4.3:33997436-33997455 | MS.gene50721:CDS | 55.0% | |
| GAAACTGTGCGGGGAAATGG+GGG | + | chr4.3:33999030-33999049 | MS.gene50721:CDS | 55.0% | |
| GATTGGGCAGTTTGGGAGAG+AGG | - | chr4.3:33996858-33996877 | None:intergenic | 55.0% | |
| GCAGCAGCCAAAGCCTTCAA+GGG | - | chr4.3:33995847-33995866 | None:intergenic | 55.0% | |
| GCTGGATAGGATCTGCATCG+AGG | - | chr4.3:33998642-33998661 | None:intergenic | 55.0% | |
| GGAAACTGTGCGGGGAAATG+GGG | + | chr4.3:33999029-33999048 | MS.gene50721:CDS | 55.0% | |
| TCCCACCCTACGAGTTTCTC+GGG | + | chr4.3:33996044-33996063 | MS.gene50721:intron | 55.0% | |
| TCGGAAACTGTGCGGGGAAA+TGG | + | chr4.3:33999027-33999046 | MS.gene50721:CDS | 55.0% | |
| TTAGGCGCAACAACGCTAGC+AGG | + | chr4.3:33994764-33994783 | MS.gene50721:CDS | 55.0% | |
| TTGGGGACCCTTGAAGGCTT+TGG | + | chr4.3:33995837-33995856 | MS.gene50721:CDS | 55.0% | |
| ! | TGACCTTGGTGGCACTTCCA+TGG | + | chr4.3:33994347-33994366 | MS.gene50721:intron | 55.0% |
| !! | GATCAAGTGTGGTGCCACTG+GGG | + | chr4.3:33999095-33999114 | MS.gene50721:CDS | 55.0% |
| !! | GTGATCAAGTGTGGTGCCAC+TGG | + | chr4.3:33999093-33999112 | MS.gene50721:CDS | 55.0% |
| !!! | GCTCCCTATGTTTTGGGGAC+TGG | + | chr4.3:33994195-33994214 | MS.gene50721:intron | 55.0% |
| CACCCGAGAAACTCGTAGGG+TGG | - | chr4.3:33996049-33996068 | None:intergenic | 60.0% | |
| CTCGCGTGCTCTGTGCAGTT+TGG | - | chr4.3:33996156-33996175 | None:intergenic | 60.0% | |
| GAAGCGACTGTTCCTGCTCG+AGG | - | chr4.3:33993519-33993538 | None:intergenic | 60.0% | |
| GAAGGGGGGAGGAAACGAAG+AGG | - | chr4.3:33993443-33993462 | None:intergenic | 60.0% | |
| GGCAGCAGCCAAAGCCTTCA+AGG | - | chr4.3:33995848-33995867 | None:intergenic | 60.0% | |
| GGGCACCCGAGAAACTCGTA+GGG | - | chr4.3:33996052-33996071 | None:intergenic | 60.0% | |
| TCCTCCCCCCTTCCCTTCTA+AGG | + | chr4.3:33993450-33993469 | MS.gene50721:CDS | 60.0% | |
| TCCTTAGAAGGGAAGGGGGG+AGG | - | chr4.3:33993454-33993473 | None:intergenic | 60.0% | |
| TGCGGGGAAATGGGGGATGT+GGG | + | chr4.3:33999037-33999056 | MS.gene50721:CDS | 60.0% | |
| TTTGCTCATGCAGGCTGGGC+GGG | + | chr4.3:33998480-33998499 | MS.gene50721:intron | 60.0% | |
| ! | AGGGCACCCGAGAAACTCGT+AGG | - | chr4.3:33996053-33996072 | None:intergenic | 60.0% |
| ! | GACAGGCTCGGTCGCTTCTA+AGG | + | chr4.3:33997166-33997185 | MS.gene50721:intron | 60.0% |
| ! | GGAGGAAACGAAGAGGTGCG+TGG | - | chr4.3:33993436-33993455 | None:intergenic | 60.0% |
| ! | TGGGGCTGCATGGGCTACAT+TGG | + | chr4.3:33995927-33995946 | MS.gene50721:CDS | 60.0% |
| !! | GCTCCATGGAAGTGCCACCA+AGG | - | chr4.3:33994353-33994372 | None:intergenic | 60.0% |
| ACCTGCAACAGTCGGCCTGG+AGG | + | chr4.3:33997444-33997463 | MS.gene50721:CDS | 65.0% | |
| ATGGGATCGCTGGGGCTGCA+TGG | + | chr4.3:33995917-33995936 | MS.gene50721:CDS | 65.0% | |
| CACACCTGCAACAGTCGGCC+TGG | + | chr4.3:33997441-33997460 | MS.gene50721:CDS | 65.0% | |
| CCTGCAACAGTCGGCCTGGA+GGG | + | chr4.3:33997445-33997464 | MS.gene50721:CDS | 65.0% | |
| CGGCCTGGAGGGAACATTGC+TGG | + | chr4.3:33997456-33997475 | MS.gene50721:CDS | 65.0% | |
| GTGCGGGGAAATGGGGGATG+TGG | + | chr4.3:33999036-33999055 | MS.gene50721:CDS | 65.0% | |
| TGGGATCGCTGGGGCTGCAT+GGG | + | chr4.3:33995918-33995937 | MS.gene50721:CDS | 65.0% | |
| CCCTCCAGGCCGACTGTTGC+AGG | - | chr4.3:33997448-33997467 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 33993371 | 33999133 | 33993371 | ID=MS.gene50721 |
| chr4.3 | mRNA | 33993371 | 33999133 | 33993371 | ID=MS.gene50721.t1;Parent=MS.gene50721 |
| chr4.3 | exon | 33993371 | 33993797 | 33993371 | ID=MS.gene50721.t1.exon1;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33993371 | 33993797 | 33993371 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33993878 | 33993972 | 33993878 | ID=MS.gene50721.t1.exon2;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33993878 | 33993972 | 33993878 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33994677 | 33994785 | 33994677 | ID=MS.gene50721.t1.exon3;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33994677 | 33994785 | 33994677 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33994911 | 33994966 | 33994911 | ID=MS.gene50721.t1.exon4;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33994911 | 33994966 | 33994911 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33995260 | 33995315 | 33995260 | ID=MS.gene50721.t1.exon5;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33995260 | 33995315 | 33995260 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33995819 | 33995957 | 33995819 | ID=MS.gene50721.t1.exon6;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33995819 | 33995957 | 33995819 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33996411 | 33996548 | 33996411 | ID=MS.gene50721.t1.exon7;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33996411 | 33996548 | 33996411 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33996634 | 33996702 | 33996634 | ID=MS.gene50721.t1.exon8;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33996634 | 33996702 | 33996634 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33996813 | 33996923 | 33996813 | ID=MS.gene50721.t1.exon9;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33996813 | 33996923 | 33996813 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33997171 | 33997299 | 33997171 | ID=MS.gene50721.t1.exon10;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33997171 | 33997299 | 33997171 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33997408 | 33997477 | 33997408 | ID=MS.gene50721.t1.exon11;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33997408 | 33997477 | 33997408 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33998493 | 33998564 | 33998493 | ID=MS.gene50721.t1.exon12;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33998493 | 33998564 | 33998493 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33998650 | 33998709 | 33998650 | ID=MS.gene50721.t1.exon13;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33998650 | 33998709 | 33998650 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33998793 | 33998863 | 33998793 | ID=MS.gene50721.t1.exon14;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33998793 | 33998863 | 33998793 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| chr4.3 | exon | 33999014 | 33999133 | 33999014 | ID=MS.gene50721.t1.exon15;Parent=MS.gene50721.t1 |
| chr4.3 | CDS | 33999014 | 33999133 | 33999014 | ID=cds.MS.gene50721.t1;Parent=MS.gene50721.t1 |
| Gene Sequence |
| Protein sequence |
