Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055633.t1 | XP_013467777.1 | 97.5 | 394 | 10 | 0 | 8 | 401 | 1 | 394 | 5.80E-221 | 776.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055633.t1 | Q9SJ66 | 72.8 | 389 | 105 | 1 | 8 | 396 | 1 | 388 | 1.9e-164 | 580.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055633.t1 | Q9FQ10 | 97.5 | 394 | 10 | 0 | 8 | 401 | 1 | 394 | 4.2e-221 | 776.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene055633 | 0.804962 | 1.68E-49 | -1.69E-46 |
| MS.gene049369 | MS.gene055633 | 0.809013 | 2.33E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene055633 | 0.81721 | 3.71E-52 | -1.69E-46 |
| MS.gene051360 | MS.gene055633 | 0.840991 | 6.23E-58 | -1.69E-46 |
| MS.gene051692 | MS.gene055633 | 0.816122 | 6.51E-52 | -1.69E-46 |
| MS.gene052484 | MS.gene055633 | 0.802997 | 4.30E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene055633 | 0.835365 | 1.75E-56 | -1.69E-46 |
| MS.gene053813 | MS.gene055633 | 0.801876 | 7.32E-49 | -1.69E-46 |
| MS.gene055412 | MS.gene055633 | 0.801055 | 1.08E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene056410 | 0.800366 | 1.49E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene056931 | 0.802968 | 4.36E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene056933 | 0.805859 | 1.09E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene058948 | 0.800161 | 1.64E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene059676 | 0.801449 | 8.96E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene059688 | 0.819411 | 1.18E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene059692 | 0.810016 | 1.42E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene059695 | 0.815486 | 9.02E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene059711 | 0.819856 | 9.32E-53 | -1.69E-46 |
| MS.gene055633 | MS.gene060356 | 0.81261 | 3.89E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene060837 | 0.831009 | 2.13E-55 | -1.69E-46 |
| MS.gene055633 | MS.gene061200 | 0.80517 | 1.52E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene062891 | 0.800903 | 1.16E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene062911 | 0.803124 | 4.05E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene063074 | 0.827049 | 1.94E-54 | -1.69E-46 |
| MS.gene055633 | MS.gene06475 | 0.800676 | 1.29E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene065032 | 0.805194 | 1.50E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene065204 | 0.837428 | 5.23E-57 | -1.69E-46 |
| MS.gene055633 | MS.gene06681 | 0.812416 | 4.29E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene067414 | 0.815846 | 7.50E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene067495 | 0.819706 | 1.01E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene068634 | 0.811758 | 5.97E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene069167 | 0.800227 | 1.59E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene069435 | 0.841831 | 3.74E-58 | -1.69E-46 |
| MS.gene055633 | MS.gene069844 | 0.834763 | 2.48E-56 | -1.69E-46 |
| MS.gene055633 | MS.gene069867 | 0.816108 | 6.55E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene07096 | 0.810573 | 1.08E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene072196 | 0.814485 | 1.50E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene072665 | 0.816392 | 5.66E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene072863 | 0.800414 | 1.46E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene073090 | 0.803306 | 3.71E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene074599 | 0.813193 | 2.90E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene09953 | 0.82121 | 4.56E-53 | -1.69E-46 |
| MS.gene055633 | MS.gene21005 | 0.814957 | 1.18E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene21037 | 0.811353 | 7.31E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene21413 | 0.830138 | 3.48E-55 | -1.69E-46 |
| MS.gene055633 | MS.gene21675 | 0.811712 | 6.10E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene21677 | 0.834764 | 2.48E-56 | -1.69E-46 |
| MS.gene055633 | MS.gene21953 | 0.824982 | 6.01E-54 | -1.69E-46 |
| MS.gene055633 | MS.gene22292 | 0.839733 | 1.33E-57 | -1.69E-46 |
| MS.gene055633 | MS.gene22484 | 0.807826 | 4.18E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene23025 | 0.814219 | 1.72E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene23338 | 0.826195 | 3.10E-54 | -1.69E-46 |
| MS.gene055633 | MS.gene23621 | 0.800668 | 1.29E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene23941 | 0.81234 | 4.45E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene24695 | 0.809867 | 1.53E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene25721 | 0.83416 | 3.52E-56 | -1.69E-46 |
| MS.gene055633 | MS.gene28132 | 0.806993 | 6.28E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene28847 | 0.802825 | 4.67E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene31046 | 0.802036 | 6.79E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene32666 | 0.80804 | 3.77E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene32705 | 0.800481 | 1.41E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene32707 | 0.804363 | 2.24E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene36610 | 0.808618 | 2.83E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene37159 | 0.813154 | 2.96E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene37214 | 0.804394 | 2.21E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene38765 | 0.800735 | 1.25E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene40212 | 0.855128 | 7.76E-62 | -1.69E-46 |
| MS.gene055633 | MS.gene40773 | 0.813093 | 3.05E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene42667 | 0.804634 | 1.97E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene42992 | 0.830892 | 2.27E-55 | -1.69E-46 |
| MS.gene055633 | MS.gene43839 | 0.80208 | 6.65E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene46507 | 0.908285 | 2.02E-81 | -1.69E-46 |
| MS.gene055633 | MS.gene46602 | 0.821931 | 3.11E-53 | -1.69E-46 |
| MS.gene055633 | MS.gene47398 | 0.803346 | 3.64E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene48445 | 0.813241 | 2.83E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene49104 | 0.813522 | 2.45E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene49365 | 0.819556 | 1.09E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene49717 | 0.802447 | 5.59E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene50196 | 0.849951 | 2.33E-60 | -1.69E-46 |
| MS.gene055633 | MS.gene50721 | 0.814219 | 1.72E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene50727 | 0.805589 | 1.24E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene50731 | 0.809897 | 1.51E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene50826 | 0.809384 | 1.94E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene52412 | 0.807355 | 5.26E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene52488 | 0.800021 | 1.75E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene52860 | 0.810885 | 9.23E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene53276 | 0.809325 | 2.00E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene57001 | 0.822773 | 1.98E-53 | -1.69E-46 |
| MS.gene055633 | MS.gene57318 | 0.801969 | 7.01E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene58120 | 0.811861 | 5.67E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene59571 | 0.820733 | 5.87E-53 | -1.69E-46 |
| MS.gene055633 | MS.gene60391 | 0.815982 | 6.99E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene60813 | 0.826602 | 2.48E-54 | -1.69E-46 |
| MS.gene055633 | MS.gene60925 | 0.804327 | 2.28E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene61160 | 0.83156 | 1.56E-55 | -1.69E-46 |
| MS.gene055633 | MS.gene62624 | 0.800144 | 1.65E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene62691 | 0.820522 | 6.56E-53 | -1.69E-46 |
| MS.gene055633 | MS.gene62901 | 0.816707 | 4.81E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene62984 | 0.835767 | 1.39E-56 | -1.69E-46 |
| MS.gene055633 | MS.gene65588 | 0.809539 | 1.80E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene66718 | 0.812284 | 4.58E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene66892 | 0.81708 | 3.97E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene67204 | 0.816149 | 6.42E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene67422 | 0.801925 | 7.15E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene68122 | 0.809827 | 1.56E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene68423 | 0.830854 | 2.32E-55 | -1.69E-46 |
| MS.gene055633 | MS.gene68723 | 0.817438 | 3.30E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene68856 | 0.80564 | 1.21E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene68858 | 0.822244 | 2.63E-53 | -1.69E-46 |
| MS.gene055633 | MS.gene68962 | 0.857564 | 1.50E-62 | -1.69E-46 |
| MS.gene055633 | MS.gene68963 | 0.807709 | 4.43E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene68964 | 0.812901 | 3.36E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene68967 | 0.840083 | 1.08E-57 | -1.69E-46 |
| MS.gene055633 | MS.gene68968 | 0.839193 | 1.83E-57 | -1.69E-46 |
| MS.gene055633 | MS.gene70267 | 0.802155 | 6.42E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene70333 | 0.822123 | 2.80E-53 | -1.69E-46 |
| MS.gene055633 | MS.gene70352 | 0.820801 | 5.66E-53 | -1.69E-46 |
| MS.gene055633 | MS.gene71535 | 0.839369 | 1.65E-57 | -1.69E-46 |
| MS.gene055633 | MS.gene71665 | 0.801874 | 7.33E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene71861 | 0.800081 | 1.70E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene71948 | 0.800194 | 1.62E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene72005 | 0.814153 | 1.78E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene72364 | 0.813913 | 2.01E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene74946 | 0.802966 | 4.37E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene75297 | 0.830772 | 2.43E-55 | -1.69E-46 |
| MS.gene055633 | MS.gene75815 | 0.800709 | 1.27E-48 | -1.69E-46 |
| MS.gene055633 | MS.gene76198 | 0.801783 | 7.65E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene76532 | 0.814867 | 1.24E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene78207 | 0.806658 | 7.39E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene79722 | 0.805802 | 1.12E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene79726 | 0.80655 | 7.79E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene79762 | 0.826949 | 2.05E-54 | -1.69E-46 |
| MS.gene055633 | MS.gene80178 | 0.80372 | 3.05E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene80413 | 0.816045 | 6.77E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene82534 | 0.812836 | 3.47E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene83516 | 0.805619 | 1.22E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene83543 | 0.841175 | 5.57E-58 | -1.69E-46 |
| MS.gene055633 | MS.gene85148 | 0.804688 | 1.92E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene86011 | 0.814884 | 1.23E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene86081 | 0.803326 | 3.68E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene86216 | 0.805864 | 1.09E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene86413 | 0.827089 | 1.90E-54 | -1.69E-46 |
| MS.gene055633 | MS.gene87890 | 0.804561 | 2.04E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene90788 | 0.802599 | 5.20E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene91483 | 0.813768 | 2.17E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene93585 | 0.816801 | 4.58E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene94292 | 0.824823 | 6.55E-54 | -1.69E-46 |
| MS.gene055633 | MS.gene96199 | 0.812905 | 3.35E-51 | -1.69E-46 |
| MS.gene055633 | MS.gene97272 | 0.805489 | 1.30E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene99855 | 0.818873 | 1.56E-52 | -1.69E-46 |
| MS.gene055633 | MS.gene99936 | 0.817936 | 2.55E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 103 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGTCCTTGTCCCATTTC+TGG | 0.095011 | 1.4:-45904222 | None:intergenic |
| GCCTCTGAGCGCTGTGCATC+TGG | 0.125178 | 1.4:+45905091 | MS.gene055633:CDS |
| AGAGGCTCTTTCTAAGATTT+TGG | 0.167196 | 1.4:+45904522 | MS.gene055633:CDS |
| TTCAGCATTCCAGGAGTTTA+TGG | 0.202008 | 1.4:+45904863 | MS.gene055633:CDS |
| TCAGAGGCATGCAGAATCTT+AGG | 0.233622 | 1.4:-45905076 | None:intergenic |
| GAATAGCTCGGCATCATTTC+CGG | 0.265204 | 1.4:-45904843 | None:intergenic |
| CATCTCTTGGGGACAGGTTT+GGG | 0.285854 | 1.4:-45905147 | None:intergenic |
| TCTAATCACAGGATCAATTC+AGG | 0.290253 | 1.4:+45903656 | None:intergenic |
| TACACATACCTTTCTTAGTA+TGG | 0.291808 | 1.4:-45906445 | None:intergenic |
| GGCTGGTGAAGTTTGATAAA+TGG | 0.304367 | 1.4:+45906301 | MS.gene055633:CDS |
| CACAGATAAGTTCAGATATA+TGG | 0.323387 | 1.4:+45906280 | MS.gene055633:CDS |
| ACATCTCTTGGGGACAGGTT+TGG | 0.339450 | 1.4:-45905148 | None:intergenic |
| TTCAAGAATTGAACCAGAAA+TGG | 0.339783 | 1.4:+45904209 | MS.gene055633:CDS |
| ATATCGCCACGATTCTTTAC+TGG | 0.343310 | 1.4:+45904048 | MS.gene055633:CDS |
| GTGGGAACTGAGATTACTTA+TGG | 0.363501 | 1.4:+45904157 | MS.gene055633:CDS |
| TGGTGCTGACCATTCTCTTA+AGG | 0.366778 | 1.4:+45906176 | MS.gene055633:CDS |
| AGGGGAAACAGTTTAGGATA+TGG | 0.373276 | 1.4:+45906238 | MS.gene055633:CDS |
| ACAGACATGATGGTTATATC+TGG | 0.375892 | 1.4:-45904136 | None:intergenic |
| ACAAACAGGGGAAACAGTTT+AGG | 0.376401 | 1.4:+45906232 | MS.gene055633:CDS |
| GCTGTTTATTGCTGCTATAA+AGG | 0.379309 | 1.4:+45905282 | MS.gene055633:CDS |
| GTTATATCTGGAGTTATCAT+AGG | 0.393312 | 1.4:-45904124 | None:intergenic |
| TTTGAGGTTCAATGCCCTTT+GGG | 0.393753 | 1.4:+45904018 | MS.gene055633:CDS |
| GCCGAGCTATTCAGCATTCC+AGG | 0.396491 | 1.4:+45904854 | MS.gene055633:CDS |
| AAAGGTGTATGGTAACAAAC+AGG | 0.400977 | 1.4:+45906218 | MS.gene055633:CDS |
| TCTTTACTGGTGTTCTCAAC+TGG | 0.416447 | 1.4:+45904061 | MS.gene055633:CDS |
| CTCAGTTGTTTGTAGAGTAA+AGG | 0.417936 | 1.4:-45904091 | None:intergenic |
| CAATGTCTGAAACATCTCTT+GGG | 0.420133 | 1.4:-45905159 | None:intergenic |
| CCAATGTCTGAAACATCTCT+TGG | 0.421240 | 1.4:-45905160 | None:intergenic |
| GCCACTGCAGTAATTCCTCT+TGG | 0.422000 | 1.4:-45905030 | None:intergenic |
| GGTGTGTATATCCACCCTTC+TGG | 0.427354 | 1.4:+45906156 | MS.gene055633:CDS |
| TTTAATATGCAGGATCCATC+TGG | 0.447565 | 1.4:+45906135 | MS.gene055633:intron |
| TTTGTCTGTTAAGTGAAAAG+TGG | 0.454824 | 1.4:+45905233 | MS.gene055633:CDS |
| GCTGGTGAAGTTTGATAAAT+GGG | 0.455050 | 1.4:+45906302 | MS.gene055633:CDS |
| TTATATACTCCTTAAGAGAA+TGG | 0.455416 | 1.4:-45906185 | None:intergenic |
| AGTACCTGAGGCTTAAGTTC+AGG | 0.473435 | 1.4:-45904268 | None:intergenic |
| GCAGGCAGAAACAGAACAAC+GGG | 0.475371 | 1.4:+45904450 | MS.gene055633:intron |
| CCTCTGAGCGCTGTGCATCT+GGG | 0.475384 | 1.4:+45905092 | MS.gene055633:CDS |
| CTGAAACATCTCTTGGGGAC+AGG | 0.480413 | 1.4:-45905153 | None:intergenic |
| TCCAGGAGTTTATGGTGTCA+TGG | 0.483135 | 1.4:+45904871 | MS.gene055633:CDS |
| CTAATCACAGGATCAATTCA+GGG | 0.484788 | 1.4:+45903657 | None:intergenic |
| CCACTGCAGTAATTCCTCTT+GGG | 0.490113 | 1.4:-45905029 | None:intergenic |
| CCAAGAGATGTTTCAGACAT+TGG | 0.490731 | 1.4:+45905160 | MS.gene055633:CDS |
| GTTTCCTGAACTTAAGCCTC+AGG | 0.490979 | 1.4:+45904264 | MS.gene055633:CDS |
| AAATCGATGGTTCCCGATGA+TGG | 0.491125 | 1.4:+45904181 | MS.gene055633:CDS |
| TCAAGAATTGAACCAGAAAT+GGG | 0.492584 | 1.4:+45904210 | MS.gene055633:CDS |
| TACTGGTGTTCTCAACTGGC+AGG | 0.497808 | 1.4:+45904065 | MS.gene055633:CDS |
| TCTTGAACCCACCCATCATC+GGG | 0.498927 | 1.4:-45904193 | None:intergenic |
| TAAAGAATCGTGGCGATATG+AGG | 0.502792 | 1.4:-45904044 | None:intergenic |
| ACCATGACACCATAAACTCC+TGG | 0.503899 | 1.4:-45904872 | None:intergenic |
| GCCCAAGTTAAAATGACCTA+TGG | 0.506142 | 1.4:-45905125 | None:intergenic |
| TTCTTGAACCCACCCATCAT+CGG | 0.513294 | 1.4:-45904194 | None:intergenic |
| CAGAGGCATGCAGAATCTTA+GGG | 0.514457 | 1.4:-45905075 | None:intergenic |
| CTCAGTTCCCACAGACATGA+TGG | 0.515217 | 1.4:-45904146 | None:intergenic |
| GAAACAGTTTAGGATATGGT+TGG | 0.522204 | 1.4:+45906242 | MS.gene055633:CDS |
| TGTCACTACCATACTAAGAA+AGG | 0.533747 | 1.4:+45906437 | MS.gene055633:CDS |
| GATATATTACCACAAGGTGC+TGG | 0.536423 | 1.4:+45904737 | MS.gene055633:CDS |
| TACCATTGTGTGATCGAGAT+CGG | 0.537477 | 1.4:-45903730 | None:intergenic |
| GAGACTGAGGGAAAGCTACC+TGG | 0.551726 | 1.4:+45904797 | MS.gene055633:CDS |
| CGATGGTTCCCGATGATGGG+TGG | 0.553320 | 1.4:+45904185 | MS.gene055633:CDS |
| ACGTGCAGAAGTTGAGAACT+CGG | 0.555017 | 1.4:+45905258 | MS.gene055633:CDS |
| AATCGATGGTTCCCGATGAT+GGG | 0.556521 | 1.4:+45904182 | MS.gene055633:CDS |
| AATTCAGGGATTGAACATCA+TGG | 0.558445 | 1.4:+45903671 | MS.gene055633:CDS |
| TCCTGGAATGCTGAATAGCT+CGG | 0.559117 | 1.4:-45904855 | None:intergenic |
| GCGATATGAGGCTTCCCAAA+GGG | 0.561720 | 1.4:-45904032 | None:intergenic |
| AGATATAACCATCATGTCTG+TGG | 0.566248 | 1.4:+45904138 | MS.gene055633:CDS |
| CCACATACTAGAGTATTACC+AGG | 0.571550 | 1.4:-45904815 | None:intergenic |
| ACTCTAGTATGTGGTGACTC+CGG | 0.576428 | 1.4:+45904824 | MS.gene055633:CDS |
| GATAAGTTCAGATATATGGC+TGG | 0.578111 | 1.4:+45906284 | MS.gene055633:CDS |
| GATATAACCATCATGTCTGT+GGG | 0.578577 | 1.4:+45904139 | MS.gene055633:CDS |
| AGAGAATGGTCAGCACCAGA+AGG | 0.588947 | 1.4:-45906171 | None:intergenic |
| GGACAAGGACATTGTCATTG+AGG | 0.590293 | 1.4:+45904231 | MS.gene055633:CDS |
| GATTACTTATGGAAAATCGA+TGG | 0.601557 | 1.4:+45904168 | MS.gene055633:CDS |
| GATGGTTCCCGATGATGGGT+GGG | 0.601629 | 1.4:+45904186 | MS.gene055633:CDS |
| TTACCACAAGGTGCTGGCAA+AGG | 0.605101 | 1.4:+45904743 | MS.gene055633:CDS |
| GATATGGTTGGACAATGTGT+TGG | 0.606614 | 1.4:+45906254 | MS.gene055633:CDS |
| TGACCTTTGCCAGCACCTTG+TGG | 0.606824 | 1.4:-45904746 | None:intergenic |
| CCTGGTAATACTCTAGTATG+TGG | 0.607257 | 1.4:+45904815 | MS.gene055633:CDS |
| GCGAGCTATTCTCTGTGTCA+TGG | 0.610204 | 1.4:-45903994 | None:intergenic |
| GATGTTAAAATAATATATAG+CGG | 0.612438 | 1.4:+45904701 | MS.gene055633:CDS |
| GGGTGGATATACACACCAGA+TGG | 0.615271 | 1.4:-45906150 | None:intergenic |
| TCTGGGATTATACAAGCCAT+AGG | 0.615679 | 1.4:+45905109 | MS.gene055633:CDS |
| GGCGATATGAGGCTTCCCAA+AGG | 0.620433 | 1.4:-45904033 | None:intergenic |
| AATGGTCAGCACCAGAAGGG+TGG | 0.627460 | 1.4:-45906167 | None:intergenic |
| GCCAACTTGCAGATGAAGAG+CGG | 0.631632 | 1.4:+45906403 | MS.gene055633:intron |
| GAGAATGGTCAGCACCAGAA+GGG | 0.632538 | 1.4:-45906170 | None:intergenic |
| ATATAGCGGAGGAGTTGACA+TGG | 0.640245 | 1.4:+45904715 | MS.gene055633:CDS |
| TTTGATAAATGGGAGTTACA+CGG | 0.646192 | 1.4:+45906312 | MS.gene055633:CDS |
| CAATGCTAAGCAAGTGACAG+AGG | 0.647164 | 1.4:+45904504 | MS.gene055633:CDS |
| CTTGCAGATGAAGAGCGGCA+TGG | 0.655839 | 1.4:+45906408 | MS.gene055633:intron |
| GTTAAAATAATATATAGCGG+AGG | 0.662156 | 1.4:+45904704 | MS.gene055633:CDS |
| AGGTGTATGGTAACAAACAG+GGG | 0.662925 | 1.4:+45906220 | MS.gene055633:CDS |
| TTCCGATCTCGATCACACAA+TGG | 0.663470 | 1.4:+45903728 | MS.gene055633:CDS |
| CCCAGATGCACAGCGCTCAG+AGG | 0.665245 | 1.4:-45905092 | None:intergenic |
| GTAGGTAAGCAACGCCCAAG+AGG | 0.666196 | 1.4:+45905015 | MS.gene055633:intron |
| CCCAAGAGGAATTACTGCAG+TGG | 0.669784 | 1.4:+45905029 | MS.gene055633:CDS |
| TGCAGGCAGAAACAGAACAA+CGG | 0.681696 | 1.4:+45904449 | MS.gene055633:intron |
| CTTTACTCTACAAACAACTG+AGG | 0.684288 | 1.4:+45904092 | MS.gene055633:CDS |
| AAGGTGTATGGTAACAAACA+GGG | 0.688423 | 1.4:+45906219 | MS.gene055633:CDS |
| AATGTCTGAAACATCTCTTG+GGG | 0.696343 | 1.4:-45905158 | None:intergenic |
| AGAACACCAGTAAAGAATCG+TGG | 0.696551 | 1.4:-45904054 | None:intergenic |
| ATTGAACCAGAAATGGGACA+AGG | 0.722798 | 1.4:+45904216 | MS.gene055633:CDS |
| GACATGGATATATTACCACA+AGG | 0.735098 | 1.4:+45904731 | MS.gene055633:CDS |
| ATAGACTCAAATCTTCTGCG+CGG | 0.750289 | 1.4:+45903694 | MS.gene055633:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATACTGAAAATA+TGG | - | chr1.4:45904921-45904940 | None:intergenic | 10.0% |
| !! | GATGTTAAAATAATATATAG+CGG | + | chr1.4:45904701-45904720 | MS.gene055633:CDS | 15.0% |
| !!! | ATCATTAGTTATTTTTTATG+TGG | + | chr1.4:45905846-45905865 | MS.gene055633:intron | 15.0% |
| !!! | GTATATAAATATTTTGAGAA+AGG | + | chr1.4:45906200-45906219 | MS.gene055633:CDS | 15.0% |
| !!! | TAGATTATTAGTCTAAAATT+GGG | + | chr1.4:45904956-45904975 | MS.gene055633:intron | 15.0% |
| !!! | TTAGATTATTAGTCTAAAAT+TGG | + | chr1.4:45904955-45904974 | MS.gene055633:intron | 15.0% |
| !! | AAAAATACTGAAAATATGGT+TGG | - | chr1.4:45904917-45904936 | None:intergenic | 20.0% |
| !! | CAAAAAATTACACAATGTTA+TGG | - | chr1.4:45904674-45904693 | None:intergenic | 20.0% |
| !!! | ACTATTTTGTTTTAATATGC+AGG | + | chr1.4:45906125-45906144 | MS.gene055633:intron | 20.0% |
| !!! | ATATTATTTTAACATCCAAC+TGG | - | chr1.4:45904697-45904716 | None:intergenic | 20.0% |
| !!! | TGATGAATATTATCTTGTTT+TGG | + | chr1.4:45905766-45905785 | MS.gene055633:intron | 20.0% |
| !!! | TGATTCATATTTTGAATGAT+CGG | + | chr1.4:45904423-45904442 | MS.gene055633:intron | 20.0% |
| !!! | TGCTTTAGTAAAAAGAATTT+TGG | - | chr1.4:45905401-45905420 | None:intergenic | 20.0% |
| !!! | TTTGGTAATATTTTCTACTT+TGG | + | chr1.4:45905729-45905748 | MS.gene055633:intron | 20.0% |
| ! | ATGCATAAAGAACATACAAT+AGG | - | chr1.4:45905348-45905367 | None:intergenic | 25.0% |
| ! | GAAATCATTTCTGAGTAAAA+TGG | - | chr1.4:45904581-45904600 | None:intergenic | 25.0% |
| ! | GTTAAAATAATATATAGCGG+AGG | + | chr1.4:45904704-45904723 | MS.gene055633:CDS | 25.0% |
| ! | GTTCAACCATTATAACAATT+CGG | + | chr1.4:45905943-45905962 | MS.gene055633:intron | 25.0% |
| ! | TCTATTCCGAATTGTTATAA+TGG | - | chr1.4:45905952-45905971 | None:intergenic | 25.0% |
| ! | TGAAAAAAAATGCACCAAAA+AGG | - | chr1.4:45905426-45905445 | None:intergenic | 25.0% |
| ! | TTATATACTCCTTAAGAGAA+TGG | - | chr1.4:45906188-45906207 | None:intergenic | 25.0% |
| !! | ATGCATCTAAAGTTAAATCA+AGG | - | chr1.4:45905697-45905716 | None:intergenic | 25.0% |
| !! | ATTATTAGTTTGAGCAACAA+TGG | + | chr1.4:45904384-45904403 | MS.gene055633:intron | 25.0% |
| !! | TGATTTAACTTTAGATGCAT+TGG | + | chr1.4:45905697-45905716 | MS.gene055633:intron | 25.0% |
| !!! | AATATTTTGAGAAAGGTGTA+TGG | + | chr1.4:45906207-45906226 | MS.gene055633:CDS | 25.0% |
| !!! | CTCAAACTTTTTAAGCAAAT+AGG | - | chr1.4:45904780-45904799 | None:intergenic | 25.0% |
| !!! | TATTATCTTGTTTTGGCAAT+TGG | + | chr1.4:45905773-45905792 | MS.gene055633:intron | 25.0% |
| !!! | TTTACTAAAGCATTCCTTTT+TGG | + | chr1.4:45905409-45905428 | MS.gene055633:intron | 25.0% |
| !!! | TTTTTCATTTTCGAGTTTCA+TGG | + | chr1.4:45905439-45905458 | MS.gene055633:intron | 25.0% |
| AAATTCTGAGTATACCAAAC+AGG | + | chr1.4:45905468-45905487 | MS.gene055633:intron | 30.0% | |
| AAGTTCGAGAGATATAAAAG+AGG | - | chr1.4:45906383-45906402 | None:intergenic | 30.0% | |
| AGTTCGAGAGATATAAAAGA+GGG | - | chr1.4:45906382-45906401 | None:intergenic | 30.0% | |
| ATAGGCAATCTGTAAAAGTA+AGG | - | chr1.4:45905330-45905349 | None:intergenic | 30.0% | |
| ATGTAAAAACTGCACAAATG+AGG | - | chr1.4:45905553-45905572 | None:intergenic | 30.0% | |
| ATGTAAAAACTGCACAAATG+CGG | - | chr1.4:45905553-45905572 | None:intergenic | 30.0% | |
| CAAATCATGTGTATATACGT+TGG | + | chr1.4:45904604-45904623 | MS.gene055633:intron | 30.0% | |
| CACAGATAAGTTCAGATATA+TGG | + | chr1.4:45906280-45906299 | MS.gene055633:CDS | 30.0% | |
| CGAGAAAAACATGATACTAA+TGG | - | chr1.4:45903786-45903805 | None:intergenic | 30.0% | |
| GATTACTTATGGAAAATCGA+TGG | + | chr1.4:45904168-45904187 | MS.gene055633:CDS | 30.0% | |
| GTGATCAAGAAAAGAGATTA+TGG | - | chr1.4:45906049-45906068 | None:intergenic | 30.0% | |
| TAGGCAATCTGTAAAAGTAA+GGG | - | chr1.4:45905329-45905348 | None:intergenic | 30.0% | |
| TCAAGAATTGAACCAGAAAT+GGG | + | chr1.4:45904210-45904229 | MS.gene055633:CDS | 30.0% | |
| TTCAAGAATTGAACCAGAAA+TGG | + | chr1.4:45904209-45904228 | MS.gene055633:CDS | 30.0% | |
| TTTGATAAATGGGAGTTACA+CGG | + | chr1.4:45906312-45906331 | MS.gene055633:CDS | 30.0% | |
| TTTGTCTGTTAAGTGAAAAG+TGG | + | chr1.4:45905233-45905252 | MS.gene055633:CDS | 30.0% | |
| ! | AGGGTTATCTTTTGCATTTT+CGG | - | chr1.4:45905059-45905078 | None:intergenic | 30.0% |
| ! | CTTAAAAAGTTTGAGACTGA+GGG | + | chr1.4:45904785-45904804 | MS.gene055633:CDS | 30.0% |
| ! | GTTATATCTGGAGTTATCAT+AGG | - | chr1.4:45904127-45904146 | None:intergenic | 30.0% |
| ! | TCACACAATGGTATATTTTG+TGG | + | chr1.4:45903740-45903759 | MS.gene055633:intron | 30.0% |
| ! | TCTGTTGATGAAAGATATTC+TGG | - | chr1.4:45905815-45905834 | None:intergenic | 30.0% |
| ! | TTATTGTTTTCTGTGAACCA+TGG | + | chr1.4:45904321-45904340 | MS.gene055633:intron | 30.0% |
| ! | TTTTTATCTATATCTCCCGA+AGG | + | chr1.4:45905526-45905545 | MS.gene055633:intron | 30.0% |
| !! | AACTTGCTAAAGCTTAATCA+AGG | - | chr1.4:45905577-45905596 | None:intergenic | 30.0% |
| !! | CAAGTTCTGAGTTTACAAAA+AGG | + | chr1.4:45905591-45905610 | MS.gene055633:intron | 30.0% |
| !! | TTGCTTTTCAATTTCCTGTT+TGG | - | chr1.4:45905485-45905504 | None:intergenic | 30.0% |
| !!! | TTGTGTAATTTTTTGCCAGT+TGG | + | chr1.4:45904679-45904698 | MS.gene055633:intron | 30.0% |
| AACTCTTGCATAAAGACTCA+TGG | - | chr1.4:45906084-45906103 | None:intergenic | 35.0% | |
| AAGGGATATCAATCATACAG+TGG | - | chr1.4:45905311-45905330 | None:intergenic | 35.0% | |
| AAGGTGTATGGTAACAAACA+GGG | + | chr1.4:45906219-45906238 | MS.gene055633:CDS | 35.0% | |
| AATTCAGGGATTGAACATCA+TGG | + | chr1.4:45903671-45903690 | MS.gene055633:CDS | 35.0% | |
| ACAGACATGATGGTTATATC+TGG | - | chr1.4:45904139-45904158 | None:intergenic | 35.0% | |
| AGATATAACCATCATGTCTG+TGG | + | chr1.4:45904138-45904157 | MS.gene055633:CDS | 35.0% | |
| ATTCGGAATAGACATTTCCA+TGG | + | chr1.4:45905960-45905979 | MS.gene055633:intron | 35.0% | |
| CTCAGTTGTTTGTAGAGTAA+AGG | - | chr1.4:45904094-45904113 | None:intergenic | 35.0% | |
| CTTTACTCTACAAACAACTG+AGG | + | chr1.4:45904092-45904111 | MS.gene055633:CDS | 35.0% | |
| GACATGGATATATTACCACA+AGG | + | chr1.4:45904731-45904750 | MS.gene055633:CDS | 35.0% | |
| GATAAGTTCAGATATATGGC+TGG | + | chr1.4:45906284-45906303 | MS.gene055633:CDS | 35.0% | |
| GATATAACCATCATGTCTGT+GGG | + | chr1.4:45904139-45904158 | MS.gene055633:CDS | 35.0% | |
| GCTGGTGAAGTTTGATAAAT+GGG | + | chr1.4:45906302-45906321 | MS.gene055633:CDS | 35.0% | |
| GCTGTTTATTGCTGCTATAA+AGG | + | chr1.4:45905282-45905301 | MS.gene055633:CDS | 35.0% | |
| GGTATTCACTGTGATTTGAT+TGG | + | chr1.4:45904298-45904317 | MS.gene055633:intron | 35.0% | |
| GTTCGAGAGATATAAAAGAG+GGG | - | chr1.4:45906381-45906400 | None:intergenic | 35.0% | |
| TAGTAAACCTGTGATTTGAG+TGG | + | chr1.4:45903942-45903961 | MS.gene055633:intron | 35.0% | |
| TCAAGAAAAGAGATTATGGC+AGG | - | chr1.4:45906045-45906064 | None:intergenic | 35.0% | |
| TGTCACTACCATACTAAGAA+AGG | + | chr1.4:45906437-45906456 | MS.gene055633:CDS | 35.0% | |
| TTCGAGAGATATAAAAGAGG+GGG | - | chr1.4:45906380-45906399 | None:intergenic | 35.0% | |
| TTCGGAATAGACATTTCCAT+GGG | + | chr1.4:45905961-45905980 | MS.gene055633:intron | 35.0% | |
| TTTAATATGCAGGATCCATC+TGG | + | chr1.4:45906135-45906154 | MS.gene055633:intron | 35.0% | |
| ! | AAAGGTGTATGGTAACAAAC+AGG | + | chr1.4:45906218-45906237 | MS.gene055633:CDS | 35.0% |
| ! | AATGTCTGAAACATCTCTTG+GGG | - | chr1.4:45905161-45905180 | None:intergenic | 35.0% |
| ! | CAATGTCTGAAACATCTCTT+GGG | - | chr1.4:45905162-45905181 | None:intergenic | 35.0% |
| ! | GAAACAGTTTAGGATATGGT+TGG | + | chr1.4:45906242-45906261 | MS.gene055633:CDS | 35.0% |
| ! | GCTTAAAAAGTTTGAGACTG+AGG | + | chr1.4:45904784-45904803 | MS.gene055633:CDS | 35.0% |
| !! | TGCATCTGTTTCTGTTCATT+GGG | + | chr1.4:45904993-45905012 | MS.gene055633:intron | 35.0% |
| !!! | AGAGGCTCTTTCTAAGATTT+TGG | + | chr1.4:45904522-45904541 | MS.gene055633:CDS | 35.0% |
| !!! | AGCCATAGGTCATTTTAACT+TGG | + | chr1.4:45905123-45905142 | MS.gene055633:CDS | 35.0% |
| !!! | GCCATAGGTCATTTTAACTT+GGG | + | chr1.4:45905124-45905143 | MS.gene055633:CDS | 35.0% |
| AAACCTGTGATTTGAGTGGT+TGG | + | chr1.4:45903946-45903965 | MS.gene055633:intron | 40.0% | |
| ACAAACAGGGGAAACAGTTT+AGG | + | chr1.4:45906232-45906251 | MS.gene055633:CDS | 40.0% | |
| AGAACACCAGTAAAGAATCG+TGG | - | chr1.4:45904057-45904076 | None:intergenic | 40.0% | |
| AGGTGTATGGTAACAAACAG+GGG | + | chr1.4:45906220-45906239 | MS.gene055633:CDS | 40.0% | |
| ATACCAACCACTCAAATCAC+AGG | - | chr1.4:45903952-45903971 | None:intergenic | 40.0% | |
| ATAGACTCAAATCTTCTGCG+CGG | + | chr1.4:45903694-45903713 | MS.gene055633:CDS | 40.0% | |
| ATATCGCCACGATTCTTTAC+TGG | + | chr1.4:45904048-45904067 | MS.gene055633:CDS | 40.0% | |
| ATTGAACCAGAAATGGGACA+AGG | + | chr1.4:45904216-45904235 | MS.gene055633:CDS | 40.0% | |
| CAACAATGGCTTCAATCAAG+TGG | + | chr1.4:45904398-45904417 | MS.gene055633:intron | 40.0% | |
| CCAAGAGATGTTTCAGACAT+TGG | + | chr1.4:45905160-45905179 | MS.gene055633:CDS | 40.0% | |
| CCTGGTAATACTCTAGTATG+TGG | + | chr1.4:45904815-45904834 | MS.gene055633:CDS | 40.0% | |
| GAAAAGAGATTATGGCAGGA+AGG | - | chr1.4:45906041-45906060 | None:intergenic | 40.0% | |
| GATATATTACCACAAGGTGC+TGG | + | chr1.4:45904737-45904756 | MS.gene055633:CDS | 40.0% | |
| GATATGGTTGGACAATGTGT+TGG | + | chr1.4:45906254-45906273 | MS.gene055633:CDS | 40.0% | |
| GCCCAAGTTAAAATGACCTA+TGG | - | chr1.4:45905128-45905147 | None:intergenic | 40.0% | |
| GGACTACATTTCAAATACGC+AGG | - | chr1.4:45905380-45905399 | None:intergenic | 40.0% | |
| GGCTGGTGAAGTTTGATAAA+TGG | + | chr1.4:45906301-45906320 | MS.gene055633:CDS | 40.0% | |
| GTATGATATCCGACACATGT+TGG | - | chr1.4:45903885-45903904 | None:intergenic | 40.0% | |
| GTGGGAACTGAGATTACTTA+TGG | + | chr1.4:45904157-45904176 | MS.gene055633:CDS | 40.0% | |
| TAAAGAATCGTGGCGATATG+AGG | - | chr1.4:45904047-45904066 | None:intergenic | 40.0% | |
| TACCATTGTGTGATCGAGAT+CGG | - | chr1.4:45903733-45903752 | None:intergenic | 40.0% | |
| TCTTTACTGGTGTTCTCAAC+TGG | + | chr1.4:45904061-45904080 | MS.gene055633:CDS | 40.0% | |
| TTCAGCATTCCAGGAGTTTA+TGG | + | chr1.4:45904863-45904882 | MS.gene055633:CDS | 40.0% | |
| ! | AGGGGAAACAGTTTAGGATA+TGG | + | chr1.4:45906238-45906257 | MS.gene055633:CDS | 40.0% |
| ! | ATACCTACTCAAAGTACCTG+AGG | - | chr1.4:45904283-45904302 | None:intergenic | 40.0% |
| ! | ATGCATTGGTCACTTTGCTT+TGG | + | chr1.4:45905711-45905730 | MS.gene055633:intron | 40.0% |
| ! | CCAATGTCTGAAACATCTCT+TGG | - | chr1.4:45905163-45905182 | None:intergenic | 40.0% |
| ! | CCACATACTAGAGTATTACC+AGG | - | chr1.4:45904818-45904837 | None:intergenic | 40.0% |
| ! | GTTGGTATGTTTCTGATTGC+AGG | + | chr1.4:45903964-45903983 | MS.gene055633:intron | 40.0% |
| ! | TCTGGGATTATACAAGCCAT+AGG | + | chr1.4:45905109-45905128 | MS.gene055633:CDS | 40.0% |
| ! | TTTGAGGTTCAATGCCCTTT+GGG | + | chr1.4:45904018-45904037 | MS.gene055633:CDS | 40.0% |
| ! | TTTTCTGTGAACCATGGTTC+AGG | + | chr1.4:45904327-45904346 | MS.gene055633:intron | 40.0% |
| ! | TTTTGAATGATCGGTACTGC+AGG | + | chr1.4:45904432-45904451 | MS.gene055633:intron | 40.0% |
| !! | CTGCATCTGTTTCTGTTCAT+TGG | + | chr1.4:45904992-45905011 | MS.gene055633:intron | 40.0% |
| !! | TCTGTTTCTGTTCATTGGGT+AGG | + | chr1.4:45904997-45905016 | MS.gene055633:intron | 40.0% |
| !!! | TCTAAGATTTTGGAACAGCG+CGG | + | chr1.4:45904532-45904551 | MS.gene055633:CDS | 40.0% |
| !!! | TTTTGAGGTTCAATGCCCTT+TGG | + | chr1.4:45904017-45904036 | MS.gene055633:CDS | 40.0% |
| AAATCGATGGTTCCCGATGA+TGG | + | chr1.4:45904181-45904200 | MS.gene055633:CDS | 45.0% | |
| AAGCCTCAGGTACTTTGAGT+AGG | + | chr1.4:45904277-45904296 | MS.gene055633:intron | 45.0% | |
| AATCGATGGTTCCCGATGAT+GGG | + | chr1.4:45904182-45904201 | MS.gene055633:CDS | 45.0% | |
| ACCATGACACCATAAACTCC+TGG | - | chr1.4:45904875-45904894 | None:intergenic | 45.0% | |
| ACGTGCAGAAGTTGAGAACT+CGG | + | chr1.4:45905258-45905277 | MS.gene055633:CDS | 45.0% | |
| ACGTTGACACCAACATGTGT+CGG | + | chr1.4:45903873-45903892 | MS.gene055633:intron | 45.0% | |
| ACTCTAGTATGTGGTGACTC+CGG | + | chr1.4:45904824-45904843 | MS.gene055633:CDS | 45.0% | |
| ACTGCACAAATGAGGTCCTT+CGG | - | chr1.4:45905545-45905564 | None:intergenic | 45.0% | |
| ACTTTAGTGCAGTTCTCCCA+TGG | - | chr1.4:45905980-45905999 | None:intergenic | 45.0% | |
| AGTACCTGAGGCTTAAGTTC+AGG | - | chr1.4:45904271-45904290 | None:intergenic | 45.0% | |
| CAATGCTAAGCAAGTGACAG+AGG | + | chr1.4:45904504-45904523 | MS.gene055633:CDS | 45.0% | |
| CAATGTCCTTGTCCCATTTC+TGG | - | chr1.4:45904225-45904244 | None:intergenic | 45.0% | |
| CCACTGCAGTAATTCCTCTT+GGG | - | chr1.4:45905032-45905051 | None:intergenic | 45.0% | |
| GAATAGCTCGGCATCATTTC+CGG | - | chr1.4:45904846-45904865 | None:intergenic | 45.0% | |
| GGACAAGGACATTGTCATTG+AGG | + | chr1.4:45904231-45904250 | MS.gene055633:CDS | 45.0% | |
| GTGTCTATGTCAGTGCTTCA+TGG | - | chr1.4:45903834-45903853 | None:intergenic | 45.0% | |
| GTTTCCTGAACTTAAGCCTC+AGG | + | chr1.4:45904264-45904283 | MS.gene055633:CDS | 45.0% | |
| TCCTGGAATGCTGAATAGCT+CGG | - | chr1.4:45904858-45904877 | None:intergenic | 45.0% | |
| TGCAGGCAGAAACAGAACAA+CGG | + | chr1.4:45904449-45904468 | MS.gene055633:intron | 45.0% | |
| TGTCAACGTGTCAATGTGTC+TGG | - | chr1.4:45903862-45903881 | None:intergenic | 45.0% | |
| TTCCGATCTCGATCACACAA+TGG | + | chr1.4:45903728-45903747 | MS.gene055633:CDS | 45.0% | |
| TTCTTGAACCCACCCATCAT+CGG | - | chr1.4:45904197-45904216 | None:intergenic | 45.0% | |
| ! | ATATAGCGGAGGAGTTGACA+TGG | + | chr1.4:45904715-45904734 | MS.gene055633:CDS | 45.0% |
| ! | CAGAGGCATGCAGAATCTTA+GGG | - | chr1.4:45905078-45905097 | None:intergenic | 45.0% |
| ! | TCAGAGGCATGCAGAATCTT+AGG | - | chr1.4:45905079-45905098 | None:intergenic | 45.0% |
| ! | TCCAGGAGTTTATGGTGTCA+TGG | + | chr1.4:45904871-45904890 | MS.gene055633:CDS | 45.0% |
| !! | CAGAGAATAGCTCGCTTTTG+AGG | + | chr1.4:45904002-45904021 | MS.gene055633:CDS | 45.0% |
| !! | GGAGTTTATGGTGTCATGGT+TGG | + | chr1.4:45904875-45904894 | MS.gene055633:intron | 45.0% |
| !! | TGGTGCTGACCATTCTCTTA+AGG | + | chr1.4:45906176-45906195 | MS.gene055633:CDS | 45.0% |
| !!! | CTAAGATTTTGGAACAGCGC+GGG | + | chr1.4:45904533-45904552 | MS.gene055633:CDS | 45.0% |
| !!! | TAAGATTTTGGAACAGCGCG+GGG | + | chr1.4:45904534-45904553 | MS.gene055633:CDS | 45.0% |
| ACATCTCTTGGGGACAGGTT+TGG | - | chr1.4:45905151-45905170 | None:intergenic | 50.0% | |
| AGAGAATGGTCAGCACCAGA+AGG | - | chr1.4:45906174-45906193 | None:intergenic | 50.0% | |
| CATCTCTTGGGGACAGGTTT+GGG | - | chr1.4:45905150-45905169 | None:intergenic | 50.0% | |
| CCCAAGAGGAATTACTGCAG+TGG | + | chr1.4:45905029-45905048 | MS.gene055633:CDS | 50.0% | |
| CTCAGTTCCCACAGACATGA+TGG | - | chr1.4:45904149-45904168 | None:intergenic | 50.0% | |
| CTGAAACATCTCTTGGGGAC+AGG | - | chr1.4:45905156-45905175 | None:intergenic | 50.0% | |
| CTGCACAAATGAGGTCCTTC+GGG | - | chr1.4:45905544-45905563 | None:intergenic | 50.0% | |
| GAGAATGGTCAGCACCAGAA+GGG | - | chr1.4:45906173-45906192 | None:intergenic | 50.0% | |
| GCAGGCAGAAACAGAACAAC+GGG | + | chr1.4:45904450-45904469 | MS.gene055633:intron | 50.0% | |
| GCCAACTTGCAGATGAAGAG+CGG | + | chr1.4:45906403-45906422 | MS.gene055633:intron | 50.0% | |
| GCCACTGCAGTAATTCCTCT+TGG | - | chr1.4:45905033-45905052 | None:intergenic | 50.0% | |
| GCGAGCTATTCTCTGTGTCA+TGG | - | chr1.4:45903997-45904016 | None:intergenic | 50.0% | |
| GCGATATGAGGCTTCCCAAA+GGG | - | chr1.4:45904035-45904054 | None:intergenic | 50.0% | |
| GGGTGGATATACACACCAGA+TGG | - | chr1.4:45906153-45906172 | None:intergenic | 50.0% | |
| GGTGTGTATATCCACCCTTC+TGG | + | chr1.4:45906156-45906175 | MS.gene055633:CDS | 50.0% | |
| TACTGGTGTTCTCAACTGGC+AGG | + | chr1.4:45904065-45904084 | MS.gene055633:CDS | 50.0% | |
| TCTTGAACCCACCCATCATC+GGG | - | chr1.4:45904196-45904215 | None:intergenic | 50.0% | |
| !! | TTACCACAAGGTGCTGGCAA+AGG | + | chr1.4:45904743-45904762 | MS.gene055633:CDS | 50.0% |
| AATGGTCAGCACCAGAAGGG+TGG | - | chr1.4:45906170-45906189 | None:intergenic | 55.0% | |
| CTTGCAGATGAAGAGCGGCA+TGG | + | chr1.4:45906408-45906427 | MS.gene055633:intron | 55.0% | |
| GAGACTGAGGGAAAGCTACC+TGG | + | chr1.4:45904797-45904816 | MS.gene055633:CDS | 55.0% | |
| GCCGAGCTATTCAGCATTCC+AGG | + | chr1.4:45904854-45904873 | MS.gene055633:CDS | 55.0% | |
| GCCGCTCTTCATCTGCAAGT+TGG | - | chr1.4:45906407-45906426 | None:intergenic | 55.0% | |
| GCTAGCGAGTTCCTGAACCA+TGG | - | chr1.4:45904341-45904360 | None:intergenic | 55.0% | |
| GGCGATATGAGGCTTCCCAA+AGG | - | chr1.4:45904036-45904055 | None:intergenic | 55.0% | |
| GTAGGTAAGCAACGCCCAAG+AGG | + | chr1.4:45905015-45905034 | MS.gene055633:intron | 55.0% | |
| TGACCTTTGCCAGCACCTTG+TGG | - | chr1.4:45904749-45904768 | None:intergenic | 55.0% | |
| !! | GATGGTTCCCGATGATGGGT+GGG | + | chr1.4:45904186-45904205 | MS.gene055633:CDS | 55.0% |
| ! | CCTCTGAGCGCTGTGCATCT+GGG | + | chr1.4:45905092-45905111 | MS.gene055633:CDS | 60.0% |
| !! | CGATGGTTCCCGATGATGGG+TGG | + | chr1.4:45904185-45904204 | MS.gene055633:CDS | 60.0% |
| CCCAGATGCACAGCGCTCAG+AGG | - | chr1.4:45905095-45905114 | None:intergenic | 65.0% | |
| ! | GCCTCTGAGCGCTGTGCATC+TGG | + | chr1.4:45905091-45905110 | MS.gene055633:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 45903667 | 45906458 | 45903667 | ID=MS.gene055633 |
| chr1.4 | mRNA | 45903667 | 45906458 | 45903667 | ID=MS.gene055633.t1;Parent=MS.gene055633 |
| chr1.4 | exon | 45903667 | 45903749 | 45903667 | ID=MS.gene055633.t1.exon1;Parent=MS.gene055633.t1 |
| chr1.4 | CDS | 45903667 | 45903749 | 45903667 | ID=cds.MS.gene055633.t1;Parent=MS.gene055633.t1 |
| chr1.4 | exon | 45903986 | 45904285 | 45903986 | ID=MS.gene055633.t1.exon2;Parent=MS.gene055633.t1 |
| chr1.4 | CDS | 45903986 | 45904285 | 45903986 | ID=cds.MS.gene055633.t1;Parent=MS.gene055633.t1 |
| chr1.4 | exon | 45904454 | 45904555 | 45904454 | ID=MS.gene055633.t1.exon3;Parent=MS.gene055633.t1 |
| chr1.4 | CDS | 45904454 | 45904555 | 45904454 | ID=cds.MS.gene055633.t1;Parent=MS.gene055633.t1 |
| chr1.4 | exon | 45904698 | 45904892 | 45904698 | ID=MS.gene055633.t1.exon4;Parent=MS.gene055633.t1 |
| chr1.4 | CDS | 45904698 | 45904892 | 45904698 | ID=cds.MS.gene055633.t1;Parent=MS.gene055633.t1 |
| chr1.4 | exon | 45905019 | 45905312 | 45905019 | ID=MS.gene055633.t1.exon5;Parent=MS.gene055633.t1 |
| chr1.4 | CDS | 45905019 | 45905312 | 45905019 | ID=cds.MS.gene055633.t1;Parent=MS.gene055633.t1 |
| chr1.4 | exon | 45906147 | 45906333 | 45906147 | ID=MS.gene055633.t1.exon6;Parent=MS.gene055633.t1 |
| chr1.4 | CDS | 45906147 | 45906333 | 45906147 | ID=cds.MS.gene055633.t1;Parent=MS.gene055633.t1 |
| chr1.4 | exon | 45906415 | 45906458 | 45906415 | ID=MS.gene055633.t1.exon7;Parent=MS.gene055633.t1 |
| chr1.4 | CDS | 45906415 | 45906458 | 45906415 | ID=cds.MS.gene055633.t1;Parent=MS.gene055633.t1 |
| Gene Sequence |
| Protein sequence |
