Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060469.t1 | XP_013458057.1 | 95.4 | 262 | 10 | 1 | 1 | 262 | 1 | 260 | 3.90E-129 | 471.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060469.t1 | Q9FNN6 | 52.5 | 221 | 78 | 4 | 3 | 223 | 7 | 200 | 3.8e-48 | 193.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060469.t1 | A0A072USM0 | 95.4 | 262 | 10 | 1 | 1 | 262 | 1 | 260 | 2.8e-129 | 471.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene060469.t1 | TF | MYB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049609 | MS.gene060469 | 0.805201 | 1.50E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene060469 | 0.805972 | 1.03E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene060469 | 0.823772 | 1.16E-53 | -1.69E-46 |
| MS.gene052322 | MS.gene060469 | 0.801942 | 7.10E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene060469 | 0.833266 | 5.89E-56 | -1.69E-46 |
| MS.gene052484 | MS.gene060469 | 0.802828 | 4.66E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene060469 | 0.811692 | 6.16E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene060469 | 0.800705 | 1.27E-48 | -1.69E-46 |
| MS.gene055206 | MS.gene060469 | 0.817676 | 2.91E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene060469 | 0.847746 | 9.51E-60 | -1.69E-46 |
| MS.gene057196 | MS.gene060469 | 0.820055 | 8.40E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene060469 | 0.812554 | 4.00E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene060469 | 0.804382 | 2.22E-49 | -1.69E-46 |
| MS.gene059455 | MS.gene060469 | 0.804559 | 2.04E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene060837 | 0.837482 | 5.06E-57 | -1.69E-46 |
| MS.gene060469 | MS.gene062227 | 0.808016 | 3.81E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene063181 | 0.801844 | 7.43E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene063420 | 0.804184 | 2.44E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene063518 | 0.838358 | 3.02E-57 | -1.69E-46 |
| MS.gene060469 | MS.gene064875 | 0.805547 | 1.27E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene065844 | 0.83741 | 5.28E-57 | -1.69E-46 |
| MS.gene060469 | MS.gene06655 | 0.820774 | 5.74E-53 | -1.69E-46 |
| MS.gene060469 | MS.gene067048 | 0.808734 | 2.68E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene06704 | 0.80502 | 1.63E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene067385 | 0.800626 | 1.32E-48 | -1.69E-46 |
| MS.gene060469 | MS.gene06869 | 0.822422 | 2.39E-53 | -1.69E-46 |
| MS.gene060469 | MS.gene06920 | 0.818437 | 1.96E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene069356 | 0.806328 | 8.68E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene069955 | 0.802815 | 4.69E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene069976 | 0.804888 | 1.74E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene070124 | 0.833431 | 5.36E-56 | -1.69E-46 |
| MS.gene060469 | MS.gene071757 | 0.824795 | 6.65E-54 | -1.69E-46 |
| MS.gene060469 | MS.gene071758 | 0.816667 | 4.91E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene072382 | 0.809108 | 2.23E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene072773 | 0.805967 | 1.03E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene073214 | 0.81315 | 2.96E-51 | -1.69E-46 |
| MS.gene060469 | MS.gene07433 | 0.8246 | 7.39E-54 | -1.69E-46 |
| MS.gene060469 | MS.gene074597 | 0.833896 | 4.10E-56 | -1.69E-46 |
| MS.gene060469 | MS.gene074599 | 0.815527 | 8.83E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene07705 | 0.802877 | 4.55E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene07910 | 0.800348 | 1.50E-48 | -1.69E-46 |
| MS.gene060469 | MS.gene08513 | 0.820282 | 7.45E-53 | -1.69E-46 |
| MS.gene060469 | MS.gene09882 | 0.80572 | 1.16E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene20275 | 0.806856 | 6.71E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene20427 | 0.839609 | 1.43E-57 | -1.69E-46 |
| MS.gene060469 | MS.gene21005 | 0.874711 | 5.45E-68 | -1.69E-46 |
| MS.gene060469 | MS.gene21037 | 0.82188 | 3.19E-53 | -1.69E-46 |
| MS.gene060469 | MS.gene21625 | 0.816145 | 6.43E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene22673 | 0.805247 | 1.46E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene23941 | 0.809301 | 2.02E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene24080 | 0.800302 | 1.54E-48 | -1.69E-46 |
| MS.gene060469 | MS.gene25560 | 0.801664 | 8.09E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene27634 | 0.804498 | 2.10E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene28254 | 0.806519 | 7.91E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene28441 | 0.809633 | 1.72E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene28984 | 0.800591 | 1.34E-48 | -1.69E-46 |
| MS.gene060469 | MS.gene29034 | 0.807694 | 4.46E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene29173 | 0.806604 | 7.59E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene29619 | 0.804307 | 2.30E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene29620 | 0.803355 | 3.63E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene30834 | 0.812055 | 5.14E-51 | -1.69E-46 |
| MS.gene060469 | MS.gene32766 | 0.818092 | 2.35E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene33504 | 0.802165 | 6.38E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene33784 | 0.840129 | 1.05E-57 | -1.69E-46 |
| MS.gene060469 | MS.gene33786 | 0.845042 | 5.20E-59 | -1.69E-46 |
| MS.gene060469 | MS.gene33834 | 0.840042 | 1.10E-57 | -1.69E-46 |
| MS.gene060469 | MS.gene36183 | 0.816054 | 6.74E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene36908 | 0.801737 | 7.82E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene38024 | 0.843274 | 1.55E-58 | -1.69E-46 |
| MS.gene060469 | MS.gene38232 | 0.850068 | 2.16E-60 | -1.69E-46 |
| MS.gene060469 | MS.gene39300 | 0.818895 | 1.54E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene39326 | 0.804227 | 2.39E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene40773 | 0.808863 | 2.51E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene42682 | 0.802706 | 4.94E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene43413 | 0.803467 | 3.44E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene43589 | 0.803449 | 3.47E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene46018 | 0.841203 | 5.48E-58 | -1.69E-46 |
| MS.gene060469 | MS.gene46109 | 0.831611 | 1.51E-55 | -1.69E-46 |
| MS.gene060469 | MS.gene46798 | 0.802858 | 4.60E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene47828 | 0.803273 | 3.77E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene47830 | 0.803404 | 3.54E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene48593 | 0.825213 | 5.30E-54 | -1.69E-46 |
| MS.gene060469 | MS.gene49004 | 0.818361 | 2.04E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene49365 | 0.812732 | 3.66E-51 | -1.69E-46 |
| MS.gene060469 | MS.gene50196 | 0.806945 | 6.43E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene50561 | 0.827694 | 1.36E-54 | -1.69E-46 |
| MS.gene060469 | MS.gene50720 | 0.801757 | 7.74E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene50721 | 0.807565 | 4.75E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene50727 | 0.82269 | 2.07E-53 | -1.69E-46 |
| MS.gene060469 | MS.gene51599 | 0.802667 | 5.03E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene51649 | 0.824352 | 8.46E-54 | -1.69E-46 |
| MS.gene060469 | MS.gene52606 | 0.819156 | 1.35E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene52776 | 0.805321 | 1.41E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene54635 | 0.800923 | 1.15E-48 | -1.69E-46 |
| MS.gene060469 | MS.gene55150 | 0.813773 | 2.16E-51 | -1.69E-46 |
| MS.gene060469 | MS.gene55815 | 0.802928 | 4.45E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene56052 | 0.804298 | 2.31E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene56658 | 0.803114 | 4.07E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene56776 | 0.82177 | 3.38E-53 | -1.69E-46 |
| MS.gene060469 | MS.gene57001 | 0.802041 | 6.77E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene58120 | 0.800544 | 1.37E-48 | -1.69E-46 |
| MS.gene060469 | MS.gene58817 | 0.803457 | 3.45E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene59571 | 0.829267 | 5.66E-55 | -1.69E-46 |
| MS.gene060469 | MS.gene61160 | 0.837215 | 5.93E-57 | -1.69E-46 |
| MS.gene060469 | MS.gene62087 | 0.80205 | 6.74E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene62427 | 0.805752 | 1.15E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene62503 | 0.804525 | 2.07E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene63955 | 0.822728 | 2.03E-53 | -1.69E-46 |
| MS.gene060469 | MS.gene66835 | 0.803407 | 3.54E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene67279 | 0.804987 | 1.66E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene68944 | 0.806526 | 7.88E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene69650 | 0.825109 | 5.61E-54 | -1.69E-46 |
| MS.gene060469 | MS.gene69736 | 0.802299 | 5.99E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene69886 | 0.824078 | 9.81E-54 | -1.69E-46 |
| MS.gene060469 | MS.gene70167 | 0.804869 | 1.76E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene70821 | 0.805423 | 1.34E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene71665 | 0.817379 | 3.40E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene71667 | 0.810546 | 1.09E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene71861 | 0.823367 | 1.44E-53 | -1.69E-46 |
| MS.gene060469 | MS.gene72005 | 0.808749 | 2.66E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene72364 | 0.80641 | 8.34E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene73665 | 0.818794 | 1.63E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene74498 | 0.802184 | 6.33E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene74541 | 0.820359 | 7.15E-53 | -1.69E-46 |
| MS.gene060469 | MS.gene75157 | 0.803846 | 2.87E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene75297 | 0.800403 | 1.47E-48 | -1.69E-46 |
| MS.gene060469 | MS.gene75432 | 0.834698 | 2.58E-56 | -1.69E-46 |
| MS.gene060469 | MS.gene75815 | 0.808783 | 2.61E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene76027 | 0.8118 | 5.84E-51 | -1.69E-46 |
| MS.gene060469 | MS.gene76428 | 0.80416 | 2.47E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene76745 | 0.802315 | 5.95E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene76907 | 0.817439 | 3.30E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene77025 | 0.819651 | 1.04E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene77663 | 0.8027 | 4.95E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene79726 | 0.822459 | 2.34E-53 | -1.69E-46 |
| MS.gene060469 | MS.gene80586 | 0.857523 | 1.54E-62 | -1.69E-46 |
| MS.gene060469 | MS.gene80905 | 0.815756 | 7.85E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene80968 | 0.807484 | 4.94E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene80969 | 0.814738 | 1.32E-51 | -1.69E-46 |
| MS.gene060469 | MS.gene81254 | 0.833093 | 6.50E-56 | -1.69E-46 |
| MS.gene060469 | MS.gene82253 | 0.815969 | 7.04E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene82379 | 0.800106 | 1.68E-48 | -1.69E-46 |
| MS.gene060469 | MS.gene82534 | 0.827586 | 1.44E-54 | -1.69E-46 |
| MS.gene060469 | MS.gene83789 | 0.810541 | 1.09E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene84575 | 0.810833 | 9.47E-51 | -1.69E-46 |
| MS.gene060469 | MS.gene85140 | 0.816378 | 5.70E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene86011 | 0.816026 | 6.84E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene86102 | 0.803891 | 2.81E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene86216 | 0.807171 | 5.76E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene87369 | 0.802231 | 6.19E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene88978 | 0.810696 | 1.01E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene90512 | 0.823292 | 1.50E-53 | -1.69E-46 |
| MS.gene060469 | MS.gene90538 | 0.844686 | 6.48E-59 | -1.69E-46 |
| MS.gene060469 | MS.gene90853 | 0.800155 | 1.65E-48 | -1.69E-46 |
| MS.gene060469 | MS.gene91576 | 0.810172 | 1.32E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene92239 | 0.818078 | 2.36E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene92305 | 0.800543 | 1.37E-48 | -1.69E-46 |
| MS.gene060469 | MS.gene92558 | 0.82384 | 1.12E-53 | -1.69E-46 |
| MS.gene060469 | MS.gene92559 | 0.814621 | 1.40E-51 | -1.69E-46 |
| MS.gene060469 | MS.gene93095 | 0.803148 | 4.00E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene95284 | 0.825783 | 3.88E-54 | -1.69E-46 |
| MS.gene060469 | MS.gene95695 | 0.81354 | 2.43E-51 | -1.69E-46 |
| MS.gene060469 | MS.gene96199 | 0.813876 | 2.05E-51 | -1.69E-46 |
| MS.gene060469 | MS.gene96252 | 0.831668 | 1.46E-55 | -1.69E-46 |
| MS.gene060469 | MS.gene97055 | 0.818128 | 2.30E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene97081 | 0.807449 | 5.03E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene97272 | 0.805739 | 1.15E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene97475 | 0.826499 | 2.62E-54 | -1.69E-46 |
| MS.gene060469 | MS.gene99197 | 0.831597 | 1.52E-55 | -1.69E-46 |
| MS.gene060469 | MS.gene99767 | 0.801005 | 1.10E-48 | -1.69E-46 |
| MS.gene060469 | MS.gene99826 | 0.833199 | 6.12E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05604 | MS.gene060469 | PPI |
| MS.gene060469 | MS.gene04574 | PPI |
| MS.gene060469 | MS.gene44859 | PPI |
| MS.gene060469 | MS.gene009920 | PPI |
| MS.gene060469 | MS.gene04050 | PPI |
| MS.gene060469 | MS.gene43756 | PPI |
| MS.gene060469 | MS.gene04461 | PPI |
| MS.gene060469 | MS.gene88743 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060469.t1 | MTR_4g111975 | 97.705 | 305 | 5 | 1 | 1 | 305 | 1 | 303 | 0.0 | 612 |
| MS.gene060469.t1 | MTR_8g063600 | 44.483 | 290 | 96 | 12 | 8 | 280 | 10 | 251 | 1.31e-63 | 202 |
| MS.gene060469.t1 | MTR_5g069710 | 48.058 | 206 | 68 | 5 | 8 | 208 | 29 | 200 | 1.68e-54 | 179 |
| MS.gene060469.t1 | MTR_3g462790 | 47.867 | 211 | 72 | 5 | 8 | 213 | 43 | 220 | 6.33e-54 | 179 |
| MS.gene060469.t1 | MTR_7g067080 | 36.774 | 310 | 144 | 9 | 3 | 294 | 30 | 305 | 1.28e-53 | 177 |
| MS.gene060469.t1 | MTR_1g111830 | 46.040 | 202 | 77 | 3 | 8 | 209 | 24 | 193 | 1.47e-53 | 175 |
| MS.gene060469.t1 | MTR_8g063870 | 35.647 | 317 | 134 | 11 | 1 | 298 | 1 | 266 | 1.27e-47 | 161 |
| MS.gene060469.t1 | MTR_5g081860 | 41.509 | 212 | 82 | 5 | 8 | 214 | 27 | 201 | 1.71e-47 | 160 |
| MS.gene060469.t1 | MTR_1g033620 | 57.500 | 160 | 45 | 5 | 155 | 298 | 20 | 172 | 2.27e-45 | 154 |
| MS.gene060469.t1 | MTR_4g100630 | 57.391 | 115 | 46 | 2 | 101 | 213 | 55 | 168 | 5.31e-35 | 129 |
| MS.gene060469.t1 | MTR_6g092540 | 73.239 | 71 | 19 | 0 | 134 | 204 | 91 | 161 | 1.10e-33 | 125 |
| MS.gene060469.t1 | MTR_8g101650 | 73.239 | 71 | 18 | 1 | 134 | 204 | 99 | 168 | 4.11e-33 | 123 |
| MS.gene060469.t1 | MTR_2g100930 | 61.053 | 95 | 31 | 1 | 110 | 204 | 85 | 173 | 1.25e-32 | 124 |
| MS.gene060469.t1 | MTR_5g037080 | 59.184 | 98 | 30 | 1 | 109 | 206 | 81 | 168 | 5.16e-28 | 110 |
| MS.gene060469.t1 | MTR_1g033600 | 41.722 | 151 | 63 | 4 | 8 | 155 | 12 | 140 | 3.84e-26 | 100 |
| MS.gene060469.t1 | MTR_0036s0260 | 67.164 | 67 | 22 | 0 | 140 | 206 | 28 | 94 | 6.69e-26 | 102 |
| MS.gene060469.t1 | MTR_4g107230 | 68.354 | 79 | 25 | 0 | 128 | 206 | 72 | 150 | 2.16e-25 | 102 |
| MS.gene060469.t1 | MTR_2g090305 | 65.672 | 67 | 23 | 0 | 140 | 206 | 28 | 94 | 1.15e-23 | 95.9 |
| MS.gene060469.t1 | MTR_5g088010 | 54.430 | 79 | 32 | 2 | 136 | 211 | 56 | 133 | 5.51e-23 | 95.5 |
| MS.gene060469.t1 | MTR_5g027570 | 50.617 | 81 | 38 | 1 | 136 | 214 | 88 | 168 | 1.08e-22 | 94.4 |
| MS.gene060469.t1 | MTR_3g104370 | 56.410 | 78 | 31 | 2 | 130 | 204 | 81 | 158 | 1.94e-22 | 93.6 |
| MS.gene060469.t1 | MTR_4g015130 | 67.797 | 59 | 19 | 0 | 150 | 208 | 3 | 61 | 4.60e-22 | 88.6 |
| MS.gene060469.t1 | MTR_5g088060 | 56.164 | 73 | 28 | 2 | 142 | 211 | 274 | 345 | 9.49e-21 | 92.4 |
| MS.gene060469.t1 | MTR_5g488160 | 56.164 | 73 | 28 | 2 | 142 | 211 | 274 | 345 | 9.49e-21 | 92.4 |
| MS.gene060469.t1 | MTR_5g027550 | 48.780 | 82 | 39 | 1 | 136 | 214 | 73 | 154 | 5.79e-18 | 81.6 |
| MS.gene060469.t1 | MTR_5g075760 | 32.512 | 203 | 92 | 10 | 8 | 207 | 13 | 173 | 1.04e-17 | 80.5 |
| MS.gene060469.t1 | MTR_1g048660 | 50.000 | 64 | 32 | 0 | 141 | 204 | 13 | 76 | 2.12e-17 | 76.3 |
| MS.gene060469.t1 | MTR_5g075790 | 32.512 | 203 | 91 | 10 | 8 | 207 | 22 | 181 | 2.80e-16 | 76.6 |
| MS.gene060469.t1 | MTR_1g022290 | 48.000 | 75 | 35 | 2 | 1 | 75 | 1 | 71 | 4.23e-16 | 72.8 |
| MS.gene060469.t1 | MTR_3g111880 | 48.000 | 75 | 36 | 2 | 3 | 77 | 2 | 73 | 6.54e-16 | 72.0 |
| MS.gene060469.t1 | MTR_1g083180 | 48.611 | 72 | 33 | 2 | 142 | 210 | 63 | 133 | 6.96e-14 | 69.3 |
| MS.gene060469.t1 | MTR_6g004250 | 44.595 | 74 | 38 | 1 | 2 | 75 | 4 | 74 | 8.64e-14 | 65.9 |
| MS.gene060469.t1 | MTR_3g116720 | 40.000 | 70 | 39 | 1 | 4 | 73 | 12 | 78 | 2.35e-12 | 62.0 |
| MS.gene060469.t1 | MTR_8g072990 | 47.170 | 53 | 28 | 0 | 137 | 189 | 97 | 149 | 1.10e-11 | 63.9 |
| MS.gene060469.t1 | MTR_6g043480 | 47.170 | 53 | 28 | 0 | 137 | 189 | 104 | 156 | 1.53e-11 | 63.5 |
| MS.gene060469.t1 | MTR_6g043490 | 38.272 | 81 | 41 | 2 | 137 | 213 | 104 | 179 | 1.79e-11 | 63.2 |
| MS.gene060469.t1 | MTR_3g070110 | 45.946 | 74 | 33 | 2 | 142 | 208 | 97 | 170 | 9.94e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060469.t1 | AT1G49010 | 54.006 | 337 | 99 | 11 | 1 | 304 | 1 | 314 | 1.13e-94 | 283 |
| MS.gene060469.t1 | AT5G08520 | 50.680 | 294 | 95 | 9 | 3 | 285 | 7 | 261 | 1.37e-80 | 246 |
| MS.gene060469.t1 | AT2G38090 | 45.366 | 205 | 90 | 3 | 5 | 208 | 26 | 209 | 5.72e-56 | 183 |
| MS.gene060469.t1 | AT5G58900 | 46.977 | 215 | 85 | 6 | 2 | 214 | 28 | 215 | 1.43e-53 | 177 |
| MS.gene060469.t1 | AT5G01200 | 44.660 | 206 | 92 | 4 | 6 | 208 | 28 | 214 | 1.41e-51 | 171 |
| MS.gene060469.t1 | AT5G23650 | 43.750 | 224 | 100 | 4 | 3 | 226 | 8 | 205 | 2.92e-50 | 169 |
| MS.gene060469.t1 | AT5G04760 | 41.629 | 221 | 90 | 4 | 8 | 228 | 6 | 187 | 2.11e-47 | 158 |
| MS.gene060469.t1 | AT5G05790 | 37.500 | 272 | 122 | 8 | 1 | 256 | 24 | 263 | 9.71e-47 | 159 |
| MS.gene060469.t1 | AT5G05790 | 37.500 | 272 | 122 | 8 | 1 | 256 | 24 | 263 | 9.71e-47 | 159 |
| MS.gene060469.t1 | AT3G11280 | 45.050 | 202 | 71 | 4 | 8 | 208 | 33 | 195 | 1.84e-46 | 157 |
| MS.gene060469.t1 | AT3G11280 | 45.050 | 202 | 71 | 4 | 8 | 208 | 33 | 195 | 1.84e-46 | 157 |
| MS.gene060469.t1 | AT5G47390 | 57.798 | 109 | 43 | 1 | 114 | 219 | 67 | 175 | 9.07e-35 | 129 |
| MS.gene060469.t1 | AT3G10580 | 38.009 | 221 | 86 | 8 | 1 | 221 | 1 | 170 | 3.24e-34 | 125 |
| MS.gene060469.t1 | AT3G10580 | 38.009 | 221 | 86 | 8 | 1 | 221 | 1 | 170 | 5.99e-34 | 125 |
| MS.gene060469.t1 | AT5G61620 | 38.265 | 196 | 89 | 7 | 114 | 300 | 84 | 256 | 1.22e-30 | 117 |
| MS.gene060469.t1 | AT4G09450 | 36.245 | 229 | 90 | 7 | 8 | 231 | 7 | 184 | 2.03e-29 | 111 |
| MS.gene060469.t1 | AT5G56840 | 56.818 | 88 | 37 | 1 | 123 | 209 | 74 | 161 | 5.80e-29 | 111 |
| MS.gene060469.t1 | AT1G70000 | 61.458 | 96 | 27 | 1 | 110 | 205 | 78 | 163 | 8.37e-28 | 108 |
| MS.gene060469.t1 | AT1G70000 | 61.458 | 96 | 27 | 1 | 110 | 205 | 78 | 163 | 8.37e-28 | 108 |
| MS.gene060469.t1 | AT1G74840 | 45.122 | 164 | 83 | 4 | 118 | 276 | 74 | 235 | 3.27e-26 | 103 |
| MS.gene060469.t1 | AT3G16350 | 65.385 | 78 | 20 | 1 | 110 | 187 | 114 | 184 | 3.60e-26 | 107 |
| MS.gene060469.t1 | AT1G74840 | 48.611 | 144 | 67 | 4 | 118 | 256 | 74 | 215 | 3.90e-26 | 104 |
| MS.gene060469.t1 | AT1G19000 | 55.556 | 108 | 45 | 2 | 130 | 237 | 92 | 196 | 1.22e-23 | 98.2 |
| MS.gene060469.t1 | AT1G19000 | 55.556 | 108 | 45 | 2 | 130 | 237 | 92 | 196 | 1.22e-23 | 98.2 |
| MS.gene060469.t1 | AT3G10590 | 47.917 | 96 | 48 | 2 | 125 | 219 | 96 | 190 | 4.76e-18 | 81.3 |
| MS.gene060469.t1 | AT4G39250 | 42.424 | 66 | 35 | 1 | 8 | 73 | 14 | 76 | 5.29e-13 | 64.7 |
| MS.gene060469.t1 | AT1G75250 | 40.845 | 71 | 39 | 1 | 3 | 73 | 7 | 74 | 2.57e-12 | 62.4 |
| MS.gene060469.t1 | AT1G75250 | 40.845 | 71 | 39 | 1 | 3 | 73 | 7 | 74 | 1.29e-11 | 61.6 |
Find 72 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAATTCATTAGCATAATT+TGG | 0.179151 | 8.2:+15487759 | None:intergenic |
| AAGAGATCAAGTTGTAATTT+TGG | 0.196816 | 8.2:-15487684 | MS.gene060469:CDS |
| CATCATCCTCCTGGTGGTTT+AGG | 0.251182 | 8.2:-15486953 | MS.gene060469:CDS |
| TTACTCGGTTTAGACAAATT+TGG | 0.255781 | 8.2:-15487238 | MS.gene060469:CDS |
| TTCAAACAAAGATTCTTCTA+AGG | 0.298166 | 8.2:-15487724 | MS.gene060469:CDS |
| CCTTCAAATACAATGGGTTT+AGG | 0.313838 | 8.2:-15487004 | MS.gene060469:CDS |
| ACAAATTTGGAAAAGGAGAT+TGG | 0.314475 | 8.2:-15487225 | MS.gene060469:CDS |
| ACGCACAAAAGTATTTCATT+AGG | 0.364378 | 8.2:-15487147 | MS.gene060469:CDS |
| ATATGTCCCCAACAAAAGTA+TGG | 0.368701 | 8.2:-15487853 | MS.gene060469:CDS |
| TGTTGCTCCTCCTGCTCATA+TGG | 0.385813 | 8.2:-15486900 | MS.gene060469:CDS |
| TTACCATGTTGACCTGTTAT+CGG | 0.390780 | 8.2:+15487034 | None:intergenic |
| AATCATCAAGCACCGATAAC+AGG | 0.397688 | 8.2:-15487046 | MS.gene060469:CDS |
| CCTAAACCCATTGTATTTGA+AGG | 0.400664 | 8.2:+15487004 | None:intergenic |
| ATCCACCTTTACCACTACTA+TGG | 0.406819 | 8.2:+15487619 | None:intergenic |
| GGATGATGGGGAAGCATAAC+AGG | 0.408632 | 8.2:+15486860 | None:intergenic |
| TTCTTCTTCATAGCTCCAAA+TGG | 0.430907 | 8.2:+15487953 | None:intergenic |
| CCTGGTGGTTTAGGAATGTA+TGG | 0.438589 | 8.2:-15486944 | MS.gene060469:CDS |
| TGTCATCAAGTGGAGCCATT+TGG | 0.441940 | 8.2:-15487968 | MS.gene060469:CDS |
| AGATGTCATTGGTGCATTGT+TGG | 0.442436 | 8.2:+15486788 | None:intergenic |
| GCTCATATGGCATCTGCAGT+TGG | 0.444181 | 8.2:-15486887 | MS.gene060469:CDS |
| CTATGCTCTTCTTCTGTCCA+TGG | 0.458260 | 8.2:+15487549 | None:intergenic |
| AGAAGATTCAAAAGAGCAAT+GGG | 0.463592 | 8.2:-15487889 | MS.gene060469:CDS |
| CTCATATGGCATCTGCAGTT+GGG | 0.466530 | 8.2:-15486886 | MS.gene060469:CDS |
| ACAATCCCTTCAAATACAAT+GGG | 0.480739 | 8.2:-15487010 | MS.gene060469:CDS |
| CACAATCCCTTCAAATACAA+TGG | 0.482952 | 8.2:-15487011 | MS.gene060469:CDS |
| TCAGAACAAGAAAGGAGAAA+AGG | 0.493051 | 8.2:-15487576 | MS.gene060469:CDS |
| GCAACAACAGGATGTCCAAC+TGG | 0.493168 | 8.2:+15486917 | None:intergenic |
| TGTTAACACTAGTAATATCA+TGG | 0.493710 | 8.2:+15487086 | None:intergenic |
| GGTTTAGACAAATTTGGAAA+AGG | 0.494395 | 8.2:-15487232 | MS.gene060469:CDS |
| TGAGCAGGAGGAGCAACAAC+AGG | 0.495632 | 8.2:+15486905 | None:intergenic |
| CTAAACCCATTGTATTTGAA+GGG | 0.499951 | 8.2:+15487005 | None:intergenic |
| GTGGATGATGATGAGGATGA+TGG | 0.500151 | 8.2:+15486846 | None:intergenic |
| GTTCAGCCTCATCATCCTCC+TGG | 0.503699 | 8.2:-15486962 | MS.gene060469:CDS |
| TGGATGATGATGAGGATGAT+GGG | 0.504027 | 8.2:+15486847 | None:intergenic |
| TGTACCTCTTGCTTACCCTA+TGG | 0.504295 | 8.2:-15486816 | MS.gene060469:CDS |
| TAAGCAAGAGGTACAACATA+AGG | 0.508613 | 8.2:+15486824 | None:intergenic |
| TGCATTGTTGGAGGTGCCAT+AGG | 0.508759 | 8.2:+15486800 | None:intergenic |
| CATCGTCATCAGAACAAGAA+AGG | 0.515208 | 8.2:-15487584 | MS.gene060469:CDS |
| AGAATGCTATAGCCATGCAT+TGG | 0.517213 | 8.2:-15487920 | MS.gene060469:CDS |
| TGTCATTGGTGCATTGTTGG+AGG | 0.521814 | 8.2:+15486791 | None:intergenic |
| GCGTGACTTGCTACTTGTGT+TGG | 0.526225 | 8.2:+15487166 | None:intergenic |
| AAGAAGATTCAAAAGAGCAA+TGG | 0.529523 | 8.2:-15487890 | MS.gene060469:CDS |
| GAAACAACATTACCAAGTAT+TGG | 0.544479 | 8.2:-15487823 | MS.gene060469:CDS |
| TAACATCATCTACCAATACT+TGG | 0.547881 | 8.2:+15487811 | None:intergenic |
| GAGATTGGAGGAGCATATCA+AGG | 0.549491 | 8.2:-15487210 | MS.gene060469:CDS |
| AAAGGAGAAAAGGAATTCCA+TGG | 0.553013 | 8.2:-15487566 | MS.gene060469:CDS |
| ACTGCAGATGCCATATGAGC+AGG | 0.554621 | 8.2:+15486890 | None:intergenic |
| GGAATGTATGGAGCACCAGT+TGG | 0.557234 | 8.2:-15486932 | MS.gene060469:CDS |
| ACACACCATAGTAGTGGTAA+AGG | 0.568656 | 8.2:-15487624 | MS.gene060469:CDS |
| TGATCTCTTATCTGAACTTG+TGG | 0.570341 | 8.2:+15487698 | None:intergenic |
| CAATGAATAGAGATAGAAGA+AGG | 0.573297 | 8.2:-15487117 | MS.gene060469:CDS |
| AGATGATGTTAGTGCAATTG+AGG | 0.574849 | 8.2:-15487799 | MS.gene060469:CDS |
| CAGCCTCATCATCCTCCTGG+TGG | 0.590947 | 8.2:-15486959 | MS.gene060469:CDS |
| CACCATAGTAGTGGTAAAGG+TGG | 0.593230 | 8.2:-15487621 | MS.gene060469:CDS |
| GGATGATGATGAGGATGATG+GGG | 0.600297 | 8.2:+15486848 | None:intergenic |
| GCAAGAGGTACAACATAAGG+TGG | 0.601447 | 8.2:+15486827 | None:intergenic |
| GATGTTAGTGCAATTGAGGA+AGG | 0.604039 | 8.2:-15487795 | MS.gene060469:CDS |
| ATAACCAACATGTCATCAAG+TGG | 0.608531 | 8.2:-15487978 | None:intergenic |
| CCATACATTCCTAAACCACC+AGG | 0.623664 | 8.2:+15486944 | None:intergenic |
| AATTTGGAAAAGGAGATTGG+AGG | 0.625943 | 8.2:-15487222 | MS.gene060469:CDS |
| AAACCACCAGGAGGATGATG+AGG | 0.627717 | 8.2:+15486956 | None:intergenic |
| GTGGTAAAGGTGGATTGTCA+AGG | 0.632578 | 8.2:-15487611 | MS.gene060469:CDS |
| GCATTGTTGGAGGTGCCATA+GGG | 0.632899 | 8.2:+15486801 | None:intergenic |
| TTTACCACTACTATGGTGTG+TGG | 0.634746 | 8.2:+15487626 | None:intergenic |
| CATGGACAGAAGAAGAGCAT+AGG | 0.635255 | 8.2:-15487548 | MS.gene060469:intron |
| GATATTACTAGTGTTAACAA+TGG | 0.637555 | 8.2:-15487082 | MS.gene060469:CDS |
| GCACCGATAACAGGTCAACA+TGG | 0.644220 | 8.2:-15487037 | MS.gene060469:CDS |
| GCAGATGCCATATGAGCAGG+AGG | 0.646062 | 8.2:+15486893 | None:intergenic |
| GACTCCACACACCATAGTAG+TGG | 0.647100 | 8.2:-15487630 | MS.gene060469:CDS |
| ACATAAGGTGGATGATGATG+AGG | 0.659765 | 8.2:+15486839 | None:intergenic |
| GGTGCCATAGGGTAAGCAAG+AGG | 0.704654 | 8.2:+15486812 | None:intergenic |
| TACATTCCTAAACCACCAGG+AGG | 0.734599 | 8.2:+15486947 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTGTTTCTTTTATTC+AGG | - | chr8.2:15487495-15487514 | MS.gene060469:intron | 15.0% |
| !! | ATTGTTGAACAATTATATGA+AGG | + | chr8.2:15487276-15487295 | None:intergenic | 20.0% |
| !! | TCTAATTCATTAGCATAATT+TGG | + | chr8.2:15487006-15487025 | None:intergenic | 20.0% |
| !! | TTCAAGGTAATTAATTAACA+TGG | - | chr8.2:15487452-15487471 | MS.gene060469:intron | 20.0% |
| !! | TTGTTGAACAATTATATGAA+GGG | + | chr8.2:15487275-15487294 | None:intergenic | 20.0% |
| !!! | TTATTCAGGTTATTTTTACT+CGG | - | chr8.2:15487509-15487528 | MS.gene060469:intron | 20.0% |
| ! | ATGAAATATATTTGTGCACA+CGG | + | chr8.2:15487402-15487421 | None:intergenic | 25.0% |
| ! | GATATTACTAGTGTTAACAA+TGG | - | chr8.2:15487680-15487699 | MS.gene060469:CDS | 25.0% |
| ! | TGTTAACACTAGTAATATCA+TGG | + | chr8.2:15487679-15487698 | None:intergenic | 25.0% |
| ! | TTCAAACAAAGATTCTTCTA+AGG | - | chr8.2:15487038-15487057 | MS.gene060469:CDS | 25.0% |
| !!! | AAGAGATCAAGTTGTAATTT+TGG | - | chr8.2:15487078-15487097 | MS.gene060469:CDS | 25.0% |
| AAGAAGATTCAAAAGAGCAA+TGG | - | chr8.2:15486872-15486891 | MS.gene060469:CDS | 30.0% | |
| ACAAATTTGGAAAAGGAGAT+TGG | - | chr8.2:15487537-15487556 | MS.gene060469:intron | 30.0% | |
| ACAATCCCTTCAAATACAAT+GGG | - | chr8.2:15487752-15487771 | MS.gene060469:CDS | 30.0% | |
| AGAAGATTCAAAAGAGCAAT+GGG | - | chr8.2:15486873-15486892 | MS.gene060469:CDS | 30.0% | |
| CAAGGATTCATTTCAATTCA+AGG | - | chr8.2:15487436-15487455 | MS.gene060469:intron | 30.0% | |
| CAATGAATAGAGATAGAAGA+AGG | - | chr8.2:15487645-15487664 | MS.gene060469:CDS | 30.0% | |
| CTAAACCCATTGTATTTGAA+GGG | + | chr8.2:15487760-15487779 | None:intergenic | 30.0% | |
| GAAACAACATTACCAAGTAT+TGG | - | chr8.2:15486939-15486958 | MS.gene060469:CDS | 30.0% | |
| GGTTTAGACAAATTTGGAAA+AGG | - | chr8.2:15487530-15487549 | MS.gene060469:intron | 30.0% | |
| TAACATCATCTACCAATACT+TGG | + | chr8.2:15486954-15486973 | None:intergenic | 30.0% | |
| TCATTAGCTAGATTTCAACA+AGG | - | chr8.2:15487418-15487437 | MS.gene060469:intron | 30.0% | |
| TTACTCGGTTTAGACAAATT+TGG | - | chr8.2:15487524-15487543 | MS.gene060469:intron | 30.0% | |
| ! | ACATGTTCCATACTTTTGTT+GGG | + | chr8.2:15486919-15486938 | None:intergenic | 30.0% |
| ! | CAAGGAATTTTGTGATATCT+AGG | - | chr8.2:15487570-15487589 | MS.gene060469:CDS | 30.0% |
| !! | ACGCACAAAAGTATTTCATT+AGG | - | chr8.2:15487615-15487634 | MS.gene060469:CDS | 30.0% |
| !! | CAAGTTGTAATTTTGGAAGT+GGG | - | chr8.2:15487085-15487104 | MS.gene060469:CDS | 30.0% |
| !! | TCAAGTTGTAATTTTGGAAG+TGG | - | chr8.2:15487084-15487103 | MS.gene060469:CDS | 30.0% |
| !!! | TTCTTTTTCAATCCAATGCA+TGG | + | chr8.2:15486857-15486876 | None:intergenic | 30.0% |
| AAAGGAGAAAAGGAATTCCA+TGG | - | chr8.2:15487196-15487215 | MS.gene060469:CDS | 35.0% | |
| AATTTGGAAAAGGAGATTGG+AGG | - | chr8.2:15487540-15487559 | MS.gene060469:intron | 35.0% | |
| AGATGATGTTAGTGCAATTG+AGG | - | chr8.2:15486963-15486982 | MS.gene060469:CDS | 35.0% | |
| ATATGTCCCCAACAAAAGTA+TGG | - | chr8.2:15486909-15486928 | MS.gene060469:CDS | 35.0% | |
| CACAATCCCTTCAAATACAA+TGG | - | chr8.2:15487751-15487770 | MS.gene060469:CDS | 35.0% | |
| CCTAAACCCATTGTATTTGA+AGG | + | chr8.2:15487761-15487780 | None:intergenic | 35.0% | |
| TCAGAACAAGAAAGGAGAAA+AGG | - | chr8.2:15487186-15487205 | MS.gene060469:CDS | 35.0% | |
| TGATCTCTTATCTGAACTTG+TGG | + | chr8.2:15487067-15487086 | None:intergenic | 35.0% | |
| TTACCATGTTGACCTGTTAT+CGG | + | chr8.2:15487731-15487750 | None:intergenic | 35.0% | |
| TTCTTCTTCATAGCTCCAAA+TGG | + | chr8.2:15486812-15486831 | None:intergenic | 35.0% | |
| ! | CACATGTTCCATACTTTTGT+TGG | + | chr8.2:15486920-15486939 | None:intergenic | 35.0% |
| ! | CATGTTCCATACTTTTGTTG+GGG | + | chr8.2:15486918-15486937 | None:intergenic | 35.0% |
| ! | CCTTCAAATACAATGGGTTT+AGG | - | chr8.2:15487758-15487777 | MS.gene060469:CDS | 35.0% |
| ! | TAAGCAAGAGGTACAACATA+AGG | + | chr8.2:15487941-15487960 | None:intergenic | 35.0% |
| !! | AATTTTGGAAGTGGGTTTTC+TGG | - | chr8.2:15487093-15487112 | MS.gene060469:CDS | 35.0% |
| ACACACCATAGTAGTGGTAA+AGG | - | chr8.2:15487138-15487157 | MS.gene060469:CDS | 40.0% | |
| AGAATGCTATAGCCATGCAT+TGG | - | chr8.2:15486842-15486861 | MS.gene060469:CDS | 40.0% | |
| ATCCACCTTTACCACTACTA+TGG | + | chr8.2:15487146-15487165 | None:intergenic | 40.0% | |
| CAGACAAACAGATAGACAGA+CGG | + | chr8.2:15487366-15487385 | None:intergenic | 40.0% | |
| CATCGTCATCAGAACAAGAA+AGG | - | chr8.2:15487178-15487197 | MS.gene060469:CDS | 40.0% | |
| GATGTTAGTGCAATTGAGGA+AGG | - | chr8.2:15486967-15486986 | MS.gene060469:CDS | 40.0% | |
| TTTACCACTACTATGGTGTG+TGG | + | chr8.2:15487139-15487158 | None:intergenic | 40.0% | |
| ! | ACATAAGGTGGATGATGATG+AGG | + | chr8.2:15487926-15487945 | None:intergenic | 40.0% |
| ! | TGGATGATGATGAGGATGAT+GGG | + | chr8.2:15487918-15487937 | None:intergenic | 40.0% |
| !! | AATCATCAAGCACCGATAAC+AGG | - | chr8.2:15487716-15487735 | MS.gene060469:CDS | 40.0% |
| CACCATAGTAGTGGTAAAGG+TGG | - | chr8.2:15487141-15487160 | MS.gene060469:CDS | 45.0% | |
| CCATACATTCCTAAACCACC+AGG | + | chr8.2:15487821-15487840 | None:intergenic | 45.0% | |
| CCTGGTGGTTTAGGAATGTA+TGG | - | chr8.2:15487818-15487837 | MS.gene060469:CDS | 45.0% | |
| CTATGCTCTTCTTCTGTCCA+TGG | + | chr8.2:15487216-15487235 | None:intergenic | 45.0% | |
| CTCATATGGCATCTGCAGTT+GGG | - | chr8.2:15487876-15487895 | MS.gene060469:CDS | 45.0% | |
| TACATTCCTAAACCACCAGG+AGG | + | chr8.2:15487818-15487837 | None:intergenic | 45.0% | |
| TGTACCTCTTGCTTACCCTA+TGG | - | chr8.2:15487946-15487965 | MS.gene060469:CDS | 45.0% | |
| TGTCATCAAGTGGAGCCATT+TGG | - | chr8.2:15486794-15486813 | MS.gene060469:CDS | 45.0% | |
| ! | CATGGACAGAAGAAGAGCAT+AGG | - | chr8.2:15487214-15487233 | MS.gene060469:CDS | 45.0% |
| ! | GAGATTGGAGGAGCATATCA+AGG | - | chr8.2:15487552-15487571 | MS.gene060469:CDS | 45.0% |
| ! | GCAAGAGGTACAACATAAGG+TGG | + | chr8.2:15487938-15487957 | None:intergenic | 45.0% |
| ! | GGATGATGATGAGGATGATG+GGG | + | chr8.2:15487917-15487936 | None:intergenic | 45.0% |
| ! | GTGGATGATGATGAGGATGA+TGG | + | chr8.2:15487919-15487938 | None:intergenic | 45.0% |
| !! | GTGGTAAAGGTGGATTGTCA+AGG | - | chr8.2:15487151-15487170 | MS.gene060469:CDS | 45.0% |
| !!! | GGGTTTTCTGGTTCTGGATT+TGG | - | chr8.2:15487105-15487124 | MS.gene060469:CDS | 45.0% |
| AAACCACCAGGAGGATGATG+AGG | + | chr8.2:15487809-15487828 | None:intergenic | 50.0% | |
| ACTGCAGATGCCATATGAGC+AGG | + | chr8.2:15487875-15487894 | None:intergenic | 50.0% | |
| CATCATCCTCCTGGTGGTTT+AGG | - | chr8.2:15487809-15487828 | MS.gene060469:CDS | 50.0% | |
| GACTCCACACACCATAGTAG+TGG | - | chr8.2:15487132-15487151 | MS.gene060469:CDS | 50.0% | |
| GCAACAACAGGATGTCCAAC+TGG | + | chr8.2:15487848-15487867 | None:intergenic | 50.0% | |
| GCTCATATGGCATCTGCAGT+TGG | - | chr8.2:15487875-15487894 | MS.gene060469:CDS | 50.0% | |
| TGTTGCTCCTCCTGCTCATA+TGG | - | chr8.2:15487862-15487881 | MS.gene060469:CDS | 50.0% | |
| ! | GCACCGATAACAGGTCAACA+TGG | - | chr8.2:15487725-15487744 | MS.gene060469:CDS | 50.0% |
| ! | GGAATGTATGGAGCACCAGT+TGG | - | chr8.2:15487830-15487849 | MS.gene060469:CDS | 50.0% |
| !! | GCATTGTTGGAGGTGCCATA+GGG | + | chr8.2:15487964-15487983 | None:intergenic | 50.0% |
| !! | GCGTGACTTGCTACTTGTGT+TGG | + | chr8.2:15487599-15487618 | None:intergenic | 50.0% |
| !! | GGATGATGGGGAAGCATAAC+AGG | + | chr8.2:15487905-15487924 | None:intergenic | 50.0% |
| !! | TGCATTGTTGGAGGTGCCAT+AGG | + | chr8.2:15487965-15487984 | None:intergenic | 50.0% |
| !!! | GGAAGTGGGTTTTCTGGTTC+TGG | - | chr8.2:15487099-15487118 | MS.gene060469:CDS | 50.0% |
| GCAGATGCCATATGAGCAGG+AGG | + | chr8.2:15487872-15487891 | None:intergenic | 55.0% | |
| GTTCAGCCTCATCATCCTCC+TGG | - | chr8.2:15487800-15487819 | MS.gene060469:CDS | 55.0% | |
| TGAGCAGGAGGAGCAACAAC+AGG | + | chr8.2:15487860-15487879 | None:intergenic | 55.0% | |
| ! | GGTGCCATAGGGTAAGCAAG+AGG | + | chr8.2:15487953-15487972 | None:intergenic | 55.0% |
| CAGCCTCATCATCCTCCTGG+TGG | - | chr8.2:15487803-15487822 | MS.gene060469:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 15486793 | 15487991 | 15486793 | ID=MS.gene060469 |
| chr8.2 | mRNA | 15486793 | 15487991 | 15486793 | ID=MS.gene060469.t1;Parent=MS.gene060469 |
| chr8.2 | exon | 15487549 | 15487991 | 15487549 | ID=MS.gene060469.t1.exon1;Parent=MS.gene060469.t1 |
| chr8.2 | CDS | 15487549 | 15487991 | 15487549 | ID=cds.MS.gene060469.t1;Parent=MS.gene060469.t1 |
| chr8.2 | exon | 15486793 | 15487267 | 15486793 | ID=MS.gene060469.t1.exon2;Parent=MS.gene060469.t1 |
| chr8.2 | CDS | 15486793 | 15487267 | 15486793 | ID=cds.MS.gene060469.t1;Parent=MS.gene060469.t1 |
| Gene Sequence |
| Protein sequence |
