Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51957.t1 | XP_003598322.1 | 98.2 | 278 | 5 | 0 | 1 | 278 | 1 | 278 | 5.70E-151 | 543.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51957.t1 | Q9SN26 | 54.1 | 279 | 101 | 5 | 1 | 278 | 1 | 253 | 8.0e-69 | 261.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51957.t1 | G7IVD5 | 98.2 | 278 | 5 | 0 | 1 | 278 | 1 | 278 | 4.1e-151 | 543.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene51957 | 0.807874 | 4.08E-50 | -1.69E-46 |
| MS.gene04919 | MS.gene51957 | 0.80069 | 1.28E-48 | -1.69E-46 |
| MS.gene04920 | MS.gene51957 | 0.816076 | 6.66E-52 | -1.69E-46 |
| MS.gene049283 | MS.gene51957 | 0.800385 | 1.48E-48 | -1.69E-46 |
| MS.gene049419 | MS.gene51957 | -0.809106 | 2.23E-50 | -1.69E-46 |
| MS.gene049680 | MS.gene51957 | 0.842828 | 2.04E-58 | -1.69E-46 |
| MS.gene049983 | MS.gene51957 | 0.801094 | 1.06E-48 | -1.69E-46 |
| MS.gene051699 | MS.gene51957 | 0.810931 | 9.02E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene51957 | 0.800939 | 1.14E-48 | -1.69E-46 |
| MS.gene052533 | MS.gene51957 | 0.830496 | 2.84E-55 | -1.69E-46 |
| MS.gene052685 | MS.gene51957 | 0.824254 | 8.92E-54 | -1.69E-46 |
| MS.gene052889 | MS.gene51957 | 0.805084 | 1.58E-49 | -1.69E-46 |
| MS.gene053094 | MS.gene51957 | 0.82215 | 2.76E-53 | -1.69E-46 |
| MS.gene053298 | MS.gene51957 | 0.838317 | 3.09E-57 | -1.69E-46 |
| MS.gene053879 | MS.gene51957 | 0.814168 | 1.77E-51 | -1.69E-46 |
| MS.gene053963 | MS.gene51957 | 0.830581 | 2.71E-55 | -1.69E-46 |
| MS.gene054222 | MS.gene51957 | 0.836703 | 8.01E-57 | -1.69E-46 |
| MS.gene054892 | MS.gene51957 | 0.835384 | 1.73E-56 | -1.69E-46 |
| MS.gene054893 | MS.gene51957 | 0.82923 | 5.78E-55 | -1.69E-46 |
| MS.gene055150 | MS.gene51957 | 0.810908 | 9.12E-51 | -1.69E-46 |
| MS.gene055229 | MS.gene51957 | 0.802668 | 5.03E-49 | -1.69E-46 |
| MS.gene056315 | MS.gene51957 | 0.806037 | 9.99E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene51957 | 0.815789 | 7.72E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene51957 | 0.855089 | 7.97E-62 | -1.69E-46 |
| MS.gene057155 | MS.gene51957 | 0.825502 | 4.53E-54 | -1.69E-46 |
| MS.gene057208 | MS.gene51957 | 0.818724 | 1.69E-52 | -1.69E-46 |
| MS.gene058159 | MS.gene51957 | 0.806311 | 8.75E-50 | -1.69E-46 |
| MS.gene058279 | MS.gene51957 | 0.805425 | 1.34E-49 | -1.69E-46 |
| MS.gene058592 | MS.gene51957 | 0.808686 | 2.74E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene51957 | 0.843744 | 1.16E-58 | -1.69E-46 |
| MS.gene05985 | MS.gene51957 | -0.857586 | 1.48E-62 | -1.69E-46 |
| MS.gene060259 | MS.gene51957 | 0.817776 | 2.77E-52 | -1.69E-46 |
| MS.gene060412 | MS.gene51957 | 0.820805 | 5.65E-53 | -1.69E-46 |
| MS.gene060932 | MS.gene51957 | 0.800147 | 1.65E-48 | -1.69E-46 |
| MS.gene060937 | MS.gene51957 | 0.808162 | 3.55E-50 | -1.69E-46 |
| MS.gene061047 | MS.gene51957 | 0.816751 | 4.71E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene51957 | 0.800885 | 1.17E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51957.t1 | MTR_3g010290 | 98.201 | 278 | 5 | 0 | 1 | 278 | 1 | 278 | 0.0 | 566 |
| MS.gene51957.t1 | MTR_3g091610 | 26.374 | 273 | 143 | 8 | 8 | 277 | 13 | 230 | 2.07e-20 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51957.t1 | AT4G10170 | 54.122 | 279 | 101 | 5 | 1 | 278 | 1 | 253 | 1.16e-93 | 277 |
| MS.gene51957.t1 | AT4G10170 | 54.122 | 279 | 101 | 5 | 1 | 278 | 1 | 253 | 1.16e-93 | 277 |
| MS.gene51957.t1 | AT1G33475 | 44.326 | 282 | 125 | 7 | 1 | 278 | 1 | 254 | 4.10e-71 | 219 |
| MS.gene51957.t1 | AT1G33475 | 44.954 | 109 | 48 | 2 | 171 | 278 | 55 | 152 | 9.88e-24 | 94.4 |
| MS.gene51957.t1 | AT1G33475 | 57.143 | 56 | 22 | 1 | 1 | 54 | 1 | 56 | 2.25e-16 | 74.7 |
| MS.gene51957.t1 | AT4G27840 | 25.175 | 286 | 177 | 7 | 1 | 277 | 1 | 258 | 4.76e-19 | 84.7 |
| MS.gene51957.t1 | AT5G52990 | 24.823 | 282 | 179 | 9 | 10 | 278 | 10 | 271 | 1.43e-15 | 75.1 |
Find 60 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTTTGCAAAAGGATA+TGG | 0.148205 | 3.2:-4057040 | MS.gene51957:CDS |
| AAGGCCTGATTCAGGAAATT+TGG | 0.252155 | 3.2:-4057094 | MS.gene51957:CDS |
| TTCAACCAAAGCCCCTTTAT+TGG | 0.253713 | 3.2:-4057217 | MS.gene51957:CDS |
| TTTCACATAGTGGTAGTAAT+TGG | 0.275380 | 3.2:-4057320 | MS.gene51957:CDS |
| AATGAGAGATGTTGAGTTAG+AGG | 0.307965 | 3.2:-4057145 | MS.gene51957:CDS |
| TCAACCAAAGCCCCTTTATT+GGG | 0.328565 | 3.2:-4057216 | MS.gene51957:CDS |
| GTATAATATTATTTGTCATC+TGG | 0.366131 | 3.2:-4056927 | MS.gene51957:CDS |
| GACGAAACTTCCTCGACATT+TGG | 0.372647 | 3.2:-4057294 | MS.gene51957:CDS |
| ATTTCGAGACAATAGGTAAA+AGG | 0.375196 | 3.2:-4057563 | MS.gene51957:CDS |
| CCGTCCAAATTTCCTGAATC+AGG | 0.383998 | 3.2:+4057090 | None:intergenic |
| AGTTTACGTTCAAGAGAAAC+TGG | 0.388560 | 3.2:-4057382 | MS.gene51957:CDS |
| AGAGGATCAAGGCCTGATTC+AGG | 0.392539 | 3.2:-4057102 | MS.gene51957:CDS |
| ATTTGTCCATTCAAATTACT+TGG | 0.402162 | 3.2:+4057252 | None:intergenic |
| TACATCTTCTTCTTTGCAAA+AGG | 0.409637 | 3.2:-4057046 | MS.gene51957:CDS |
| AGATGAAGGTCTTGGTAACT+TGG | 0.412330 | 3.2:-4057493 | MS.gene51957:CDS |
| TCTTCTTTGCAAAAGGATAT+GGG | 0.415200 | 3.2:-4057039 | MS.gene51957:CDS |
| TAGCTAGAACAATGCGTACT+TGG | 0.417134 | 3.2:+4056965 | None:intergenic |
| CTCAAAACGTCCGTAAGAAA+TGG | 0.447780 | 3.2:-4056993 | MS.gene51957:CDS |
| TACTTCACAATTGTAGATGA+AGG | 0.455781 | 3.2:-4057507 | MS.gene51957:CDS |
| CATTACTGTTGTGTTTCTAA+AGG | 0.456727 | 3.2:-4057681 | MS.gene51957:CDS |
| CCATTCAAATTACTTGGTGA+TGG | 0.462379 | 3.2:+4057258 | None:intergenic |
| CACAGCCTTGTGCTTGGAGG+CGG | 0.462743 | 3.2:-4057607 | MS.gene51957:CDS |
| ACGTAAACTGAATTCATGTT+TGG | 0.465378 | 3.2:+4057396 | None:intergenic |
| ACAATTGTAGATGAAGGTCT+TGG | 0.466801 | 3.2:-4057501 | MS.gene51957:CDS |
| ACAATAGGTAAAAGGACTTA+CGG | 0.467377 | 3.2:-4057555 | MS.gene51957:CDS |
| CTTGGCGCCACCATTTCTTA+CGG | 0.469508 | 3.2:+4056983 | None:intergenic |
| CAATAGGTAAAAGGACTTAC+GGG | 0.479243 | 3.2:-4057554 | MS.gene51957:CDS |
| TTAGAGAATGTTTCACATAG+TGG | 0.480167 | 3.2:-4057330 | MS.gene51957:CDS |
| AGGCGGTTCCTTCTTTCCAC+AGG | 0.481926 | 3.2:-4057590 | MS.gene51957:CDS |
| CACATCTTGTATGCGTATAG+TGG | 0.484986 | 3.2:-4057654 | MS.gene51957:CDS |
| AAATTACTTGGTGATGGAGA+TGG | 0.492575 | 3.2:+4057264 | None:intergenic |
| TTCAGAAAGGTAGCTAGAAA+AGG | 0.498079 | 3.2:-4057435 | MS.gene51957:CDS |
| AGGTGGTATTTCGAGACAAT+AGG | 0.503747 | 3.2:-4057570 | MS.gene51957:CDS |
| GGTTCAATGAGGACGAGATC+AGG | 0.506463 | 3.2:-4057018 | MS.gene51957:CDS |
| AGGTAGCTAGAAAAGGTTCA+AGG | 0.518283 | 3.2:-4057428 | MS.gene51957:CDS |
| CGGTTCCTTCTTTCCACAGG+TGG | 0.523709 | 3.2:-4057587 | MS.gene51957:CDS |
| CCATCACCAAGTAATTTGAA+TGG | 0.529421 | 3.2:-4057258 | MS.gene51957:CDS |
| AAATACCACCTGTGGAAAGA+AGG | 0.529530 | 3.2:+4057582 | None:intergenic |
| GTGATCAGATTACGAATGAC+AGG | 0.539134 | 3.2:+4057357 | None:intergenic |
| ACTTCCTCGACATTTGGCAT+TGG | 0.540398 | 3.2:-4057288 | MS.gene51957:CDS |
| GCAAGAGAAGAAGAAAGTAA+AGG | 0.545957 | 3.2:-4057181 | MS.gene51957:CDS |
| TGTCACAGCCTTGTGCTTGG+AGG | 0.553859 | 3.2:-4057610 | MS.gene51957:CDS |
| GAATGTCACAGCCTTGTGCT+TGG | 0.555477 | 3.2:-4057613 | MS.gene51957:CDS |
| AATCTACAGATAGAGGATCA+AGG | 0.570567 | 3.2:-4057113 | MS.gene51957:CDS |
| GGTAGCTAGAAAAGGTTCAA+GGG | 0.580926 | 3.2:-4057427 | MS.gene51957:CDS |
| ATCTTGTATGCGTATAGTGG+TGG | 0.589645 | 3.2:-4057651 | MS.gene51957:CDS |
| AAAACGTCCGTAAGAAATGG+TGG | 0.598377 | 3.2:-4056990 | MS.gene51957:CDS |
| CACTATACGCATACAAGATG+TGG | 0.605232 | 3.2:+4057655 | None:intergenic |
| TTGTCTCGAAATACCACCTG+TGG | 0.605879 | 3.2:+4057574 | None:intergenic |
| AGGAACCGCCTCCAAGCACA+AGG | 0.610638 | 3.2:+4057602 | None:intergenic |
| GTAGCTAGAAAAGGTTCAAG+GGG | 0.613162 | 3.2:-4057426 | MS.gene51957:CDS |
| AAGATGTAGCAGCACCACCT+TGG | 0.620183 | 3.2:+4057061 | None:intergenic |
| AATTTGGACGGTATTAGCCA+AGG | 0.623716 | 3.2:-4057078 | MS.gene51957:CDS |
| TGTCAGAGATGAATTCAGAA+AGG | 0.624051 | 3.2:-4057448 | MS.gene51957:CDS |
| CCTGATTCAGGAAATTTGGA+CGG | 0.627032 | 3.2:-4057090 | MS.gene51957:CDS |
| ATCGAATGCATGATATACCA+CGG | 0.650850 | 3.2:+4056893 | None:intergenic |
| ATCTGGTTAGTAATATGCCG+TGG | 0.655337 | 3.2:-4056910 | MS.gene51957:CDS |
| TGGACCAATGCCAAATGTCG+AGG | 0.656618 | 3.2:+4057284 | None:intergenic |
| TTGGACGGTATTAGCCAAGG+TGG | 0.682644 | 3.2:-4057075 | MS.gene51957:CDS |
| AAAAGGATATGGGTTCAATG+AGG | 0.721400 | 3.2:-4057029 | MS.gene51957:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTATAATATTATTTGTCATC+TGG | - | chr3.2:4057669-4057688 | MS.gene51957:CDS | 20.0% |
| ! | ATTTGTCCATTCAAATTACT+TGG | + | chr3.2:4057347-4057366 | None:intergenic | 25.0% |
| ! | CATAAAAAATCTACAGATAG+AGG | - | chr3.2:4057476-4057495 | MS.gene51957:CDS | 25.0% |
| ACAATAGGTAAAAGGACTTA+CGG | - | chr3.2:4057041-4057060 | MS.gene51957:CDS | 30.0% | |
| ACGTAAACTGAATTCATGTT+TGG | + | chr3.2:4057203-4057222 | None:intergenic | 30.0% | |
| ATTTCGAGACAATAGGTAAA+AGG | - | chr3.2:4057033-4057052 | MS.gene51957:CDS | 30.0% | |
| TACATCTTCTTCTTTGCAAA+AGG | - | chr3.2:4057550-4057569 | MS.gene51957:CDS | 30.0% | |
| TACTTCACAATTGTAGATGA+AGG | - | chr3.2:4057089-4057108 | MS.gene51957:CDS | 30.0% | |
| TCTTCTTTGCAAAAGGATAT+GGG | - | chr3.2:4057557-4057576 | MS.gene51957:CDS | 30.0% | |
| TTAGAGAATGTTTCACATAG+TGG | - | chr3.2:4057266-4057285 | MS.gene51957:CDS | 30.0% | |
| TTCTTCTTTGCAAAAGGATA+TGG | - | chr3.2:4057556-4057575 | MS.gene51957:CDS | 30.0% | |
| TTTCACATAGTGGTAGTAAT+TGG | - | chr3.2:4057276-4057295 | MS.gene51957:CDS | 30.0% | |
| ! | CATTACTGTTGTGTTTCTAA+AGG | - | chr3.2:4056915-4056934 | MS.gene51957:CDS | 30.0% |
| ! | TGCTAGATTTTCCCAATAAA+GGG | + | chr3.2:4057394-4057413 | None:intergenic | 30.0% |
| ! | TTGCTAGATTTTCCCAATAA+AGG | + | chr3.2:4057395-4057414 | None:intergenic | 30.0% |
| AAAAGGATATGGGTTCAATG+AGG | - | chr3.2:4057567-4057586 | MS.gene51957:CDS | 35.0% | |
| AATCTACAGATAGAGGATCA+AGG | - | chr3.2:4057483-4057502 | MS.gene51957:CDS | 35.0% | |
| AATGAGAGATGTTGAGTTAG+AGG | - | chr3.2:4057451-4057470 | MS.gene51957:CDS | 35.0% | |
| ACAATTGTAGATGAAGGTCT+TGG | - | chr3.2:4057095-4057114 | MS.gene51957:CDS | 35.0% | |
| AGTTTACGTTCAAGAGAAAC+TGG | - | chr3.2:4057214-4057233 | MS.gene51957:CDS | 35.0% | |
| ATCGAATGCATGATATACCA+CGG | + | chr3.2:4057706-4057725 | None:intergenic | 35.0% | |
| CAATAGGTAAAAGGACTTAC+GGG | - | chr3.2:4057042-4057061 | MS.gene51957:CDS | 35.0% | |
| CCATCACCAAGTAATTTGAA+TGG | - | chr3.2:4057338-4057357 | MS.gene51957:CDS | 35.0% | |
| GCAAGAGAAGAAGAAAGTAA+AGG | - | chr3.2:4057415-4057434 | MS.gene51957:CDS | 35.0% | |
| TGTCAGAGATGAATTCAGAA+AGG | - | chr3.2:4057148-4057167 | MS.gene51957:CDS | 35.0% | |
| TTCAGAAAGGTAGCTAGAAA+AGG | - | chr3.2:4057161-4057180 | MS.gene51957:CDS | 35.0% | |
| ! | ATTTCTTACGGACGTTTTGA+GGG | + | chr3.2:4057604-4057623 | None:intergenic | 35.0% |
| ! | CCATTCAAATTACTTGGTGA+TGG | + | chr3.2:4057341-4057360 | None:intergenic | 35.0% |
| ! | GCTAGATTTTCCCAATAAAG+GGG | + | chr3.2:4057393-4057412 | None:intergenic | 35.0% |
| !! | AAATTACTTGGTGATGGAGA+TGG | + | chr3.2:4057335-4057354 | None:intergenic | 35.0% |
| !! | CTTGGTAGTTCTTCAGTTTT+TGG | - | chr3.2:4057121-4057140 | MS.gene51957:CDS | 35.0% |
| AAAACGTCCGTAAGAAATGG+TGG | - | chr3.2:4057606-4057625 | MS.gene51957:CDS | 40.0% | |
| AAATACCACCTGTGGAAAGA+AGG | + | chr3.2:4057017-4057036 | None:intergenic | 40.0% | |
| AAGGCCTGATTCAGGAAATT+TGG | - | chr3.2:4057502-4057521 | MS.gene51957:CDS | 40.0% | |
| AATTTGGACGGTATTAGCCA+AGG | - | chr3.2:4057518-4057537 | MS.gene51957:CDS | 40.0% | |
| AGGTAGCTAGAAAAGGTTCA+AGG | - | chr3.2:4057168-4057187 | MS.gene51957:CDS | 40.0% | |
| AGGTGGTATTTCGAGACAAT+AGG | - | chr3.2:4057026-4057045 | MS.gene51957:CDS | 40.0% | |
| ATCTGGTTAGTAATATGCCG+TGG | - | chr3.2:4057686-4057705 | MS.gene51957:CDS | 40.0% | |
| ATCTTGTATGCGTATAGTGG+TGG | - | chr3.2:4056945-4056964 | MS.gene51957:CDS | 40.0% | |
| CACATCTTGTATGCGTATAG+TGG | - | chr3.2:4056942-4056961 | MS.gene51957:CDS | 40.0% | |
| CACTATACGCATACAAGATG+TGG | + | chr3.2:4056944-4056963 | None:intergenic | 40.0% | |
| CCTGATTCAGGAAATTTGGA+CGG | - | chr3.2:4057506-4057525 | MS.gene51957:CDS | 40.0% | |
| CTCAAAACGTCCGTAAGAAA+TGG | - | chr3.2:4057603-4057622 | MS.gene51957:CDS | 40.0% | |
| GGTAGCTAGAAAAGGTTCAA+GGG | - | chr3.2:4057169-4057188 | MS.gene51957:CDS | 40.0% | |
| GTAGCTAGAAAAGGTTCAAG+GGG | - | chr3.2:4057170-4057189 | MS.gene51957:CDS | 40.0% | |
| GTGATCAGATTACGAATGAC+AGG | + | chr3.2:4057242-4057261 | None:intergenic | 40.0% | |
| TAGCTAGAACAATGCGTACT+TGG | + | chr3.2:4057634-4057653 | None:intergenic | 40.0% | |
| TCAACCAAAGCCCCTTTATT+GGG | - | chr3.2:4057380-4057399 | MS.gene51957:CDS | 40.0% | |
| TTCAACCAAAGCCCCTTTAT+TGG | - | chr3.2:4057379-4057398 | MS.gene51957:CDS | 40.0% | |
| ! | AGATGAAGGTCTTGGTAACT+TGG | - | chr3.2:4057103-4057122 | MS.gene51957:CDS | 40.0% |
| ! | CATTTCTTACGGACGTTTTG+AGG | + | chr3.2:4057605-4057624 | None:intergenic | 40.0% |
| ! | TTTTCCCAATAAAGGGGCTT+TGG | + | chr3.2:4057387-4057406 | None:intergenic | 40.0% |
| !! | AAGGACTTACGGGTTTTTAG+TGG | - | chr3.2:4057052-4057071 | MS.gene51957:CDS | 40.0% |
| !!! | TACGGGTTTTTAGTGGAAGA+TGG | - | chr3.2:4057059-4057078 | MS.gene51957:CDS | 40.0% |
| ACTTCCTCGACATTTGGCAT+TGG | - | chr3.2:4057308-4057327 | MS.gene51957:CDS | 45.0% | |
| CCGTCCAAATTTCCTGAATC+AGG | + | chr3.2:4057509-4057528 | None:intergenic | 45.0% | |
| GACGAAACTTCCTCGACATT+TGG | - | chr3.2:4057302-4057321 | MS.gene51957:CDS | 45.0% | |
| TTGTCTCGAAATACCACCTG+TGG | + | chr3.2:4057025-4057044 | None:intergenic | 45.0% | |
| AAGATGTAGCAGCACCACCT+TGG | + | chr3.2:4057538-4057557 | None:intergenic | 50.0% | |
| AGAGGATCAAGGCCTGATTC+AGG | - | chr3.2:4057494-4057513 | MS.gene51957:CDS | 50.0% | |
| CTTGGCGCCACCATTTCTTA+CGG | + | chr3.2:4057616-4057635 | None:intergenic | 50.0% | |
| GGTTCAATGAGGACGAGATC+AGG | - | chr3.2:4057578-4057597 | MS.gene51957:CDS | 50.0% | |
| TGGACCAATGCCAAATGTCG+AGG | + | chr3.2:4057315-4057334 | None:intergenic | 50.0% | |
| TTGGACGGTATTAGCCAAGG+TGG | - | chr3.2:4057521-4057540 | MS.gene51957:CDS | 50.0% | |
| ! | GAATGTCACAGCCTTGTGCT+TGG | - | chr3.2:4056983-4057002 | MS.gene51957:CDS | 50.0% |
| AGGCGGTTCCTTCTTTCCAC+AGG | - | chr3.2:4057006-4057025 | MS.gene51957:CDS | 55.0% | |
| CGGTTCCTTCTTTCCACAGG+TGG | - | chr3.2:4057009-4057028 | MS.gene51957:CDS | 55.0% | |
| ! | TGTCACAGCCTTGTGCTTGG+AGG | - | chr3.2:4056986-4057005 | MS.gene51957:CDS | 55.0% |
| AGGAACCGCCTCCAAGCACA+AGG | + | chr3.2:4056997-4057016 | None:intergenic | 60.0% | |
| ! | CACAGCCTTGTGCTTGGAGG+CGG | - | chr3.2:4056989-4057008 | MS.gene51957:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 4056891 | 4057727 | 4056891 | ID=MS.gene51957 |
| chr3.2 | mRNA | 4056891 | 4057727 | 4056891 | ID=MS.gene51957.t1;Parent=MS.gene51957 |
| chr3.2 | exon | 4056891 | 4057727 | 4056891 | ID=MS.gene51957.t1.exon1;Parent=MS.gene51957.t1 |
| chr3.2 | CDS | 4056891 | 4057727 | 4056891 | ID=cds.MS.gene51957.t1;Parent=MS.gene51957.t1 |
| Gene Sequence |
| Protein sequence |
