Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57766.t1 | XP_003610314.1 | 97.5 | 568 | 10 | 2 | 1 | 566 | 166 | 731 | 0.00E+00 | 1090.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57766.t1 | Q8RWS9 | 80.7 | 566 | 103 | 4 | 1 | 563 | 155 | 717 | 1.5e-263 | 909.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57766.t1 | G7JGP4 | 97.5 | 568 | 10 | 2 | 1 | 566 | 166 | 731 | 0.0e+00 | 1090.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049424 | MS.gene57766 | 0.832279 | 1.03E-55 | -1.69E-46 |
| MS.gene049653 | MS.gene57766 | 0.814005 | 1.92E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene57766 | 0.801746 | 7.78E-49 | -1.69E-46 |
| MS.gene050105 | MS.gene57766 | 0.804774 | 1.84E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene57766 | 0.805147 | 1.54E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene57766 | 0.814894 | 1.22E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene57766 | 0.809148 | 2.18E-50 | -1.69E-46 |
| MS.gene051926 | MS.gene57766 | -0.802235 | 6.18E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene57766 | 0.808392 | 3.17E-50 | -1.69E-46 |
| MS.gene052674 | MS.gene57766 | 0.818859 | 1.57E-52 | -1.69E-46 |
| MS.gene052675 | MS.gene57766 | 0.823885 | 1.09E-53 | -1.69E-46 |
| MS.gene052677 | MS.gene57766 | 0.822569 | 2.21E-53 | -1.69E-46 |
| MS.gene053006 | MS.gene57766 | 0.80027 | 1.56E-48 | -1.69E-46 |
| MS.gene05350 | MS.gene57766 | 0.817579 | 3.06E-52 | -1.69E-46 |
| MS.gene053931 | MS.gene57766 | 0.802208 | 6.26E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene57766 | 0.808415 | 3.13E-50 | -1.69E-46 |
| MS.gene055230 | MS.gene57766 | 0.837958 | 3.82E-57 | -1.69E-46 |
| MS.gene055818 | MS.gene57766 | 0.8202 | 7.78E-53 | -1.69E-46 |
| MS.gene056480 | MS.gene57766 | 0.805426 | 1.34E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene57766 | 0.818496 | 1.90E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene57766 | 0.819944 | 8.90E-53 | -1.69E-46 |
| MS.gene058009 | MS.gene57766 | 0.844973 | 5.42E-59 | -1.69E-46 |
| MS.gene058010 | MS.gene57766 | 0.814713 | 1.34E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene57766 | 0.803841 | 2.88E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene57766 | 0.82842 | 9.08E-55 | -1.69E-46 |
| MS.gene060322 | MS.gene57766 | 0.8383 | 3.12E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene57766 | 0.815723 | 7.99E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57766.t1 | MTR_4g130820 | 98.239 | 568 | 6 | 2 | 1 | 566 | 166 | 731 | 0.0 | 1147 |
| MS.gene57766.t1 | MTR_3g091080 | 61.296 | 571 | 208 | 7 | 1 | 564 | 148 | 712 | 0.0 | 726 |
| MS.gene57766.t1 | MTR_1g028370 | 60.209 | 573 | 212 | 7 | 1 | 564 | 150 | 715 | 0.0 | 715 |
| MS.gene57766.t1 | MTR_2g460590 | 56.068 | 585 | 230 | 7 | 1 | 566 | 114 | 690 | 0.0 | 668 |
| MS.gene57766.t1 | MTR_3g109030 | 56.441 | 590 | 225 | 8 | 1 | 566 | 144 | 725 | 0.0 | 661 |
| MS.gene57766.t1 | MTR_2g094860 | 56.261 | 567 | 238 | 7 | 1 | 563 | 143 | 703 | 0.0 | 647 |
| MS.gene57766.t1 | MTR_7g117310 | 55.478 | 575 | 234 | 8 | 1 | 562 | 162 | 727 | 0.0 | 636 |
| MS.gene57766.t1 | MTR_7g117310 | 55.478 | 575 | 234 | 8 | 1 | 562 | 150 | 715 | 0.0 | 636 |
| MS.gene57766.t1 | MTR_7g117310 | 55.478 | 575 | 234 | 8 | 1 | 562 | 96 | 661 | 0.0 | 635 |
| MS.gene57766.t1 | MTR_4g058730 | 60.404 | 495 | 189 | 4 | 3 | 495 | 127 | 616 | 0.0 | 635 |
| MS.gene57766.t1 | MTR_1g064240 | 53.287 | 578 | 250 | 9 | 3 | 566 | 139 | 710 | 0.0 | 622 |
| MS.gene57766.t1 | MTR_8g027755 | 52.724 | 569 | 257 | 7 | 1 | 560 | 152 | 717 | 0.0 | 614 |
| MS.gene57766.t1 | MTR_3g088875 | 50.842 | 594 | 261 | 6 | 1 | 566 | 102 | 692 | 0.0 | 610 |
| MS.gene57766.t1 | MTR_7g034605 | 51.724 | 580 | 254 | 7 | 1 | 563 | 110 | 680 | 0.0 | 609 |
| MS.gene57766.t1 | MTR_6g477760 | 42.197 | 519 | 258 | 13 | 1 | 495 | 190 | 690 | 2.25e-112 | 350 |
| MS.gene57766.t1 | MTR_6g075290 | 40.875 | 526 | 276 | 13 | 1 | 508 | 58 | 566 | 4.23e-108 | 335 |
| MS.gene57766.t1 | MTR_6g075290 | 40.875 | 526 | 276 | 13 | 1 | 508 | 219 | 727 | 3.12e-107 | 338 |
| MS.gene57766.t1 | MTR_6g075290 | 40.875 | 526 | 276 | 13 | 1 | 508 | 260 | 768 | 1.11e-106 | 337 |
| MS.gene57766.t1 | MTR_8g464570 | 37.725 | 501 | 293 | 10 | 3 | 491 | 131 | 624 | 1.55e-104 | 329 |
| MS.gene57766.t1 | MTR_7g012260 | 39.010 | 505 | 281 | 10 | 3 | 491 | 179 | 672 | 4.58e-104 | 329 |
| MS.gene57766.t1 | MTR_5g007630 | 39.652 | 517 | 278 | 14 | 3 | 504 | 238 | 735 | 3.00e-103 | 328 |
| MS.gene57766.t1 | MTR_2g081110 | 37.551 | 490 | 271 | 13 | 19 | 491 | 149 | 620 | 6.83e-98 | 311 |
| MS.gene57766.t1 | MTR_6g075440 | 36.667 | 510 | 289 | 12 | 3 | 494 | 238 | 731 | 1.39e-96 | 311 |
| MS.gene57766.t1 | MTR_6g075440 | 36.542 | 509 | 291 | 12 | 3 | 494 | 238 | 731 | 1.63e-96 | 311 |
| MS.gene57766.t1 | MTR_6g076060 | 38.393 | 448 | 245 | 11 | 62 | 493 | 26 | 458 | 5.23e-80 | 260 |
| MS.gene57766.t1 | MTR_6g075390 | 35.412 | 497 | 275 | 13 | 1 | 471 | 182 | 658 | 1.36e-77 | 258 |
| MS.gene57766.t1 | MTR_6g075410 | 35.167 | 509 | 289 | 14 | 1 | 489 | 165 | 652 | 2.37e-77 | 258 |
| MS.gene57766.t1 | MTR_2g094810 | 48.624 | 109 | 56 | 0 | 13 | 121 | 12 | 120 | 1.75e-30 | 115 |
| MS.gene57766.t1 | MTR_4g113530 | 25.728 | 206 | 150 | 2 | 208 | 412 | 238 | 441 | 5.25e-15 | 79.0 |
| MS.gene57766.t1 | MTR_2g006870 | 24.044 | 183 | 138 | 1 | 209 | 391 | 262 | 443 | 1.00e-12 | 71.6 |
| MS.gene57766.t1 | MTR_3g108320 | 21.792 | 413 | 253 | 11 | 1 | 412 | 99 | 442 | 3.40e-12 | 69.3 |
| MS.gene57766.t1 | MTR_3g108320 | 21.792 | 413 | 253 | 11 | 1 | 412 | 99 | 442 | 4.32e-12 | 69.3 |
| MS.gene57766.t1 | MTR_3g108320 | 21.792 | 413 | 253 | 11 | 1 | 412 | 99 | 442 | 6.09e-12 | 68.9 |
| MS.gene57766.t1 | MTR_5g077770 | 25.414 | 181 | 132 | 2 | 209 | 389 | 282 | 459 | 4.52e-11 | 66.2 |
| MS.gene57766.t1 | MTR_8g046440 | 20.856 | 187 | 147 | 1 | 209 | 395 | 34 | 219 | 6.45e-11 | 64.3 |
| MS.gene57766.t1 | MTR_8g446430 | 19.603 | 403 | 239 | 9 | 1 | 395 | 95 | 420 | 6.98e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57766.t1 | AT5G57940 | 80.389 | 566 | 105 | 4 | 1 | 563 | 148 | 710 | 0.0 | 950 |
| MS.gene57766.t1 | AT5G57940 | 80.389 | 566 | 105 | 4 | 1 | 563 | 155 | 717 | 0.0 | 949 |
| MS.gene57766.t1 | AT5G57940 | 80.389 | 566 | 105 | 4 | 1 | 563 | 155 | 717 | 0.0 | 949 |
| MS.gene57766.t1 | AT2G23980 | 76.776 | 577 | 121 | 5 | 1 | 564 | 143 | 719 | 0.0 | 919 |
| MS.gene57766.t1 | AT2G23980 | 76.776 | 577 | 121 | 5 | 1 | 564 | 170 | 746 | 0.0 | 919 |
| MS.gene57766.t1 | AT2G23980 | 76.776 | 577 | 121 | 5 | 1 | 564 | 170 | 746 | 0.0 | 919 |
| MS.gene57766.t1 | AT2G23980 | 76.776 | 577 | 121 | 5 | 1 | 564 | 170 | 746 | 0.0 | 919 |
| MS.gene57766.t1 | AT2G23980 | 76.776 | 577 | 121 | 5 | 1 | 564 | 170 | 746 | 0.0 | 919 |
| MS.gene57766.t1 | AT2G23980 | 76.776 | 577 | 121 | 5 | 1 | 564 | 170 | 746 | 0.0 | 919 |
| MS.gene57766.t1 | AT4G30560 | 76.761 | 568 | 122 | 4 | 1 | 564 | 170 | 731 | 0.0 | 909 |
| MS.gene57766.t1 | AT4G30560 | 76.761 | 568 | 122 | 4 | 1 | 564 | 144 | 705 | 0.0 | 909 |
| MS.gene57766.t1 | AT4G30560 | 76.761 | 568 | 122 | 4 | 1 | 564 | 144 | 705 | 0.0 | 909 |
| MS.gene57766.t1 | AT4G30560 | 76.761 | 568 | 122 | 4 | 1 | 564 | 144 | 705 | 0.0 | 909 |
| MS.gene57766.t1 | AT4G30560 | 76.761 | 568 | 122 | 4 | 1 | 564 | 170 | 731 | 0.0 | 909 |
| MS.gene57766.t1 | AT2G23980 | 73.833 | 600 | 121 | 6 | 1 | 564 | 170 | 769 | 0.0 | 905 |
| MS.gene57766.t1 | AT2G23980 | 73.833 | 600 | 121 | 6 | 1 | 564 | 170 | 769 | 0.0 | 905 |
| MS.gene57766.t1 | AT2G23980 | 73.833 | 600 | 121 | 6 | 1 | 564 | 170 | 769 | 0.0 | 905 |
| MS.gene57766.t1 | AT2G23980 | 73.833 | 600 | 121 | 6 | 1 | 564 | 170 | 769 | 0.0 | 905 |
| MS.gene57766.t1 | AT1G15990 | 71.134 | 582 | 148 | 5 | 1 | 563 | 158 | 738 | 0.0 | 841 |
| MS.gene57766.t1 | AT1G19780 | 70.408 | 588 | 151 | 4 | 1 | 566 | 164 | 750 | 0.0 | 839 |
| MS.gene57766.t1 | AT1G19780 | 68.831 | 539 | 145 | 4 | 50 | 566 | 2 | 539 | 0.0 | 749 |
| MS.gene57766.t1 | AT5G53130 | 59.337 | 573 | 217 | 5 | 1 | 564 | 151 | 716 | 0.0 | 702 |
| MS.gene57766.t1 | AT1G01340 | 58.276 | 580 | 217 | 6 | 1 | 563 | 130 | 701 | 0.0 | 698 |
| MS.gene57766.t1 | AT1G01340 | 58.276 | 580 | 217 | 6 | 1 | 563 | 135 | 706 | 0.0 | 697 |
| MS.gene57766.t1 | AT4G01010 | 57.118 | 569 | 225 | 5 | 1 | 561 | 135 | 692 | 0.0 | 672 |
| MS.gene57766.t1 | AT4G01010 | 57.118 | 569 | 225 | 5 | 1 | 561 | 135 | 692 | 0.0 | 672 |
| MS.gene57766.t1 | AT4G30360 | 55.178 | 589 | 229 | 9 | 3 | 566 | 142 | 720 | 0.0 | 648 |
| MS.gene57766.t1 | AT2G24610 | 55.219 | 594 | 228 | 7 | 1 | 564 | 141 | 726 | 0.0 | 648 |
| MS.gene57766.t1 | AT2G24610 | 55.219 | 594 | 228 | 7 | 1 | 564 | 156 | 741 | 0.0 | 647 |
| MS.gene57766.t1 | AT2G28260 | 56.239 | 569 | 219 | 8 | 1 | 563 | 134 | 678 | 0.0 | 644 |
| MS.gene57766.t1 | AT2G28260 | 56.239 | 569 | 219 | 8 | 1 | 563 | 94 | 638 | 0.0 | 643 |
| MS.gene57766.t1 | AT2G46430 | 53.460 | 578 | 246 | 8 | 1 | 565 | 139 | 706 | 0.0 | 637 |
| MS.gene57766.t1 | AT2G46430 | 53.460 | 578 | 246 | 8 | 1 | 565 | 139 | 706 | 0.0 | 637 |
| MS.gene57766.t1 | AT5G14870 | 51.581 | 601 | 251 | 8 | 3 | 566 | 108 | 705 | 0.0 | 624 |
| MS.gene57766.t1 | AT3G48010 | 51.765 | 595 | 247 | 10 | 3 | 560 | 113 | 704 | 0.0 | 613 |
| MS.gene57766.t1 | AT2G46440 | 49.053 | 528 | 253 | 8 | 7 | 526 | 102 | 621 | 8.23e-167 | 488 |
| MS.gene57766.t1 | AT2G46450 | 44.207 | 561 | 282 | 10 | 10 | 563 | 69 | 605 | 1.26e-157 | 464 |
| MS.gene57766.t1 | AT2G46450 | 44.207 | 561 | 282 | 10 | 10 | 563 | 82 | 618 | 2.63e-157 | 464 |
| MS.gene57766.t1 | AT2G46450 | 44.149 | 564 | 284 | 10 | 7 | 563 | 102 | 641 | 3.17e-157 | 464 |
| MS.gene57766.t1 | AT2G46450 | 44.149 | 564 | 284 | 10 | 7 | 563 | 102 | 641 | 3.17e-157 | 464 |
| MS.gene57766.t1 | AT2G46440 | 49.777 | 448 | 212 | 7 | 87 | 526 | 1 | 443 | 2.74e-145 | 426 |
| MS.gene57766.t1 | AT3G17690 | 39.223 | 515 | 274 | 14 | 3 | 499 | 227 | 720 | 1.00e-107 | 339 |
| MS.gene57766.t1 | AT3G17700 | 40.159 | 503 | 266 | 14 | 3 | 488 | 261 | 745 | 1.67e-101 | 324 |
| MS.gene57766.t1 | AT5G15410 | 38.477 | 499 | 289 | 8 | 3 | 488 | 184 | 677 | 1.54e-100 | 320 |
| MS.gene57766.t1 | AT5G15410 | 38.477 | 499 | 289 | 8 | 3 | 488 | 183 | 676 | 1.76e-100 | 320 |
| MS.gene57766.t1 | AT5G54250 | 37.344 | 482 | 274 | 12 | 26 | 491 | 176 | 645 | 1.84e-94 | 303 |
| MS.gene57766.t1 | AT5G54250 | 37.344 | 482 | 274 | 12 | 26 | 491 | 176 | 645 | 1.84e-94 | 303 |
| MS.gene57766.t1 | AT5G54250 | 37.344 | 482 | 274 | 12 | 26 | 491 | 176 | 645 | 1.84e-94 | 303 |
| MS.gene57766.t1 | AT3G17690 | 39.906 | 426 | 227 | 10 | 3 | 419 | 227 | 632 | 2.19e-94 | 302 |
| MS.gene57766.t1 | AT3G17700 | 40.559 | 429 | 232 | 11 | 3 | 426 | 261 | 671 | 9.48e-90 | 291 |
| MS.gene57766.t1 | AT5G54250 | 36.515 | 482 | 273 | 13 | 26 | 491 | 176 | 640 | 7.28e-89 | 288 |
| MS.gene57766.t1 | AT3G17690 | 38.284 | 303 | 165 | 8 | 3 | 296 | 227 | 516 | 2.31e-56 | 198 |
| MS.gene57766.t1 | AT3G02850 | 27.128 | 188 | 132 | 3 | 208 | 393 | 273 | 457 | 2.04e-13 | 73.9 |
| MS.gene57766.t1 | AT3G02850 | 27.128 | 188 | 132 | 3 | 208 | 393 | 273 | 457 | 2.39e-13 | 73.2 |
| MS.gene57766.t1 | AT3G02850 | 27.128 | 188 | 132 | 3 | 208 | 393 | 273 | 457 | 2.91e-13 | 73.2 |
| MS.gene57766.t1 | AT4G22200 | 22.995 | 187 | 143 | 1 | 209 | 395 | 263 | 448 | 1.18e-12 | 71.2 |
| MS.gene57766.t1 | AT5G37500 | 25.683 | 183 | 133 | 2 | 209 | 391 | 203 | 382 | 1.49e-12 | 70.9 |
| MS.gene57766.t1 | AT5G37500 | 25.683 | 183 | 133 | 2 | 209 | 391 | 257 | 436 | 1.50e-12 | 70.9 |
| MS.gene57766.t1 | AT5G37500 | 25.683 | 183 | 133 | 2 | 209 | 391 | 257 | 436 | 1.88e-12 | 70.9 |
| MS.gene57766.t1 | AT5G37500 | 25.683 | 183 | 133 | 2 | 209 | 391 | 257 | 436 | 1.92e-12 | 70.9 |
| MS.gene57766.t1 | AT4G22200 | 22.995 | 187 | 143 | 1 | 209 | 395 | 263 | 448 | 2.56e-12 | 70.5 |
| MS.gene57766.t1 | AT5G46240 | 22.000 | 200 | 155 | 1 | 208 | 407 | 245 | 443 | 5.98e-12 | 68.9 |
| MS.gene57766.t1 | AT2G26650 | 20.153 | 392 | 242 | 7 | 22 | 412 | 120 | 441 | 1.11e-11 | 68.2 |
| MS.gene57766.t1 | AT2G26650 | 20.153 | 392 | 242 | 7 | 22 | 412 | 15 | 336 | 1.83e-11 | 67.4 |
| MS.gene57766.t1 | AT4G32650 | 23.913 | 184 | 139 | 1 | 210 | 393 | 276 | 458 | 3.86e-11 | 66.2 |
| MS.gene57766.t1 | AT4G32650 | 23.913 | 184 | 139 | 1 | 210 | 393 | 276 | 458 | 5.06e-11 | 65.9 |
| MS.gene57766.t1 | AT4G32650 | 23.913 | 184 | 139 | 1 | 210 | 393 | 276 | 458 | 5.38e-11 | 65.9 |
Find 146 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATATCTTTACTGTTTA+TGG | 0.022733 | 8.4:-3228541 | MS.gene57766:CDS |
| GCTCCATCATCTCGTGTCTT+TGG | 0.178515 | 8.4:-3230154 | MS.gene57766:CDS |
| ACACGCTCTCTAAGCTCTTT+TGG | 0.222016 | 8.4:+3227238 | None:intergenic |
| CTCTTAAGTTCTGAAGTTAA+TGG | 0.232977 | 8.4:+3229067 | None:intergenic |
| CTCCATCATCTCGTGTCTTT+GGG | 0.266985 | 8.4:-3230153 | MS.gene57766:CDS |
| CAATGTAAGCCGTGCGAAAT+TGG | 0.274977 | 8.4:+3230176 | None:intergenic |
| GGTTCCACTATTTGAGAGTA+TGG | 0.306379 | 8.4:-3226584 | MS.gene57766:CDS |
| TCAATAGCACTTGCCATATC+AGG | 0.329052 | 8.4:-3227915 | MS.gene57766:CDS |
| GGCAAACTTTGAGGCTAATA+AGG | 0.330312 | 8.4:+3226030 | None:intergenic |
| ATCCTCTTCGCGCTTCTGAT+TGG | 0.344987 | 8.4:-3227888 | MS.gene57766:CDS |
| CAGAGAATACTTATATTGTT+CGG | 0.346563 | 8.4:-3226510 | MS.gene57766:CDS |
| AGCACCCGCCCATGCAGTTT+CGG | 0.362208 | 8.4:+3229027 | None:intergenic |
| AAATTAATTACCTTAAATTC+TGG | 0.365686 | 8.4:+3228510 | None:intergenic |
| TTTCAGCTCATCGGCGGTTA+AGG | 0.369784 | 8.4:+3226267 | None:intergenic |
| ACTGATTATTTGCAGATAGT+TGG | 0.381899 | 8.4:-3228815 | MS.gene57766:intron |
| CACCAACTCCCTGGCAGTCT+TGG | 0.398928 | 8.4:+3225970 | None:intergenic |
| ATCTTTACTGTTTATGGTGG+GGG | 0.405257 | 8.4:-3228535 | MS.gene57766:CDS |
| ATCATCTCGTGTCTTTGGGC+GGG | 0.405515 | 8.4:-3230149 | MS.gene57766:CDS |
| CTTGTAATCAGATTGTTGTT+TGG | 0.406927 | 8.4:-3229192 | MS.gene57766:intron |
| TCACTGCAGTACCCTTGGTC+AGG | 0.408201 | 8.4:-3227976 | MS.gene57766:intron |
| ATATCTCTTCGAAGATCCTT+TGG | 0.408228 | 8.4:+3227145 | None:intergenic |
| TATTAAGCGTCATCTCTGTT+TGG | 0.412230 | 8.4:-3227125 | MS.gene57766:CDS |
| CTCTCATTTCCTCCAGCCTA+AGG | 0.417185 | 8.4:+3227305 | None:intergenic |
| ATGAAAAGCATCTCATCAAC+TGG | 0.418687 | 8.4:+3226478 | None:intergenic |
| TTTAAGCAAGCCTTGTCATC+TGG | 0.423538 | 8.4:-3228590 | MS.gene57766:CDS |
| TGGAAGATTAGAACCAGATC+TGG | 0.424177 | 8.4:+3226336 | None:intergenic |
| GGTACCATTCGAAGAAATCT+AGG | 0.424271 | 8.4:+3229088 | None:intergenic |
| TAGAACCAGATCTGGGGTCC+AGG | 0.433905 | 8.4:+3226344 | None:intergenic |
| ATCGACTCGCCAAGACTGCC+AGG | 0.437488 | 8.4:-3225979 | MS.gene57766:CDS |
| AGAGAATACTTATATTGTTC+GGG | 0.441039 | 8.4:-3226509 | MS.gene57766:CDS |
| ATCTGTGTTGCCAGTACCAC+AGG | 0.445249 | 8.4:-3230056 | MS.gene57766:intron |
| CACTATAACCTTCCGTGTGC+TGG | 0.445320 | 8.4:+3228693 | None:intergenic |
| TGGGCCCTGGACCCCAGATC+TGG | 0.448919 | 8.4:-3226349 | MS.gene57766:CDS |
| CGCCCAAAGACACGAGATGA+TGG | 0.455061 | 8.4:+3230151 | None:intergenic |
| GTGTCTTTGCCGAAACTGCA+TGG | 0.456842 | 8.4:-3229036 | MS.gene57766:CDS |
| TTTCAACCGCACATATCTAA+AGG | 0.457653 | 8.4:-3226404 | MS.gene57766:CDS |
| TCAGTCCCTTACCCTTAGGC+TGG | 0.460097 | 8.4:-3227317 | MS.gene57766:CDS |
| TAATAAGGCGGCACCAAGGC+TGG | 0.460595 | 8.4:+3226045 | None:intergenic |
| GAAGAGGATGAGACCTGATA+TGG | 0.460796 | 8.4:+3227902 | None:intergenic |
| AACGGCAGTTCCTCCAGCCT+TGG | 0.469815 | 8.4:-3226058 | MS.gene57766:CDS |
| TTTCCTCCAGCCTAAGGGTA+AGG | 0.471966 | 8.4:+3227311 | None:intergenic |
| TCATCCATACTCTCAAATAG+TGG | 0.476542 | 8.4:+3226580 | None:intergenic |
| TCTGCTGTAAAGTCAGGCTC+AGG | 0.479099 | 8.4:+3225932 | None:intergenic |
| ACTCTCAACAATGGAGAACC+TGG | 0.480377 | 8.4:-3226183 | MS.gene57766:CDS |
| CATCATCTCGTGTCTTTGGG+CGG | 0.483109 | 8.4:-3230150 | MS.gene57766:CDS |
| TCATCTCGTGTCTTTGGGCG+GGG | 0.485159 | 8.4:-3230148 | MS.gene57766:CDS |
| TGGTTTCAGTCTCTCACATA+TGG | 0.485163 | 8.4:+3226543 | None:intergenic |
| TTACTTCACTGCAGTACCCT+TGG | 0.485316 | 8.4:-3227981 | MS.gene57766:intron |
| CTGTTTGGCTTTAGTGAGGA+GGG | 0.485661 | 8.4:-3227110 | MS.gene57766:intron |
| CGCCAAGACTGCCAGGGAGT+TGG | 0.489302 | 8.4:-3225972 | MS.gene57766:CDS |
| ATATCTTTACTGTTTATGGT+GGG | 0.494622 | 8.4:-3228537 | MS.gene57766:CDS |
| GGGCGAGCTTGTGATAGATT+CGG | 0.504640 | 8.4:-3230128 | MS.gene57766:CDS |
| GCATCATCTGCTGTAAAGTC+AGG | 0.505947 | 8.4:+3225926 | None:intergenic |
| ACACGGAAGGTTATAGTGCC+TGG | 0.506802 | 8.4:-3228688 | MS.gene57766:CDS |
| TTCAAACTAGCACATATCCT+GGG | 0.507377 | 8.4:-3227950 | MS.gene57766:CDS |
| TCAGAACTTAAGAGAACAGC+TGG | 0.509746 | 8.4:-3229058 | MS.gene57766:CDS |
| CTTCAAACTAGCACATATCC+TGG | 0.511018 | 8.4:-3227951 | MS.gene57766:CDS |
| TATCTTTACTGTTTATGGTG+GGG | 0.514479 | 8.4:-3228536 | MS.gene57766:CDS |
| AATATCTTTACTGTTTATGG+TGG | 0.516798 | 8.4:-3228538 | MS.gene57766:CDS |
| TAGACGTCTTCACAGTAGAC+AGG | 0.517455 | 8.4:-3226227 | MS.gene57766:CDS |
| TTGAATAAAACAAGCAGCCC+AGG | 0.520184 | 8.4:+3226165 | None:intergenic |
| GGAAGATTAGAACCAGATCT+GGG | 0.521641 | 8.4:+3226337 | None:intergenic |
| ATCTTCAGTCCCTTACCCTT+AGG | 0.524427 | 8.4:-3227321 | MS.gene57766:CDS |
| TAAAGGAGGCTGAGTTCTGT+GGG | 0.524904 | 8.4:-3226387 | MS.gene57766:CDS |
| CACTGCAGTACCCTTGGTCA+GGG | 0.528148 | 8.4:-3227975 | MS.gene57766:intron |
| TCTGTTTGGCTTTAGTGAGG+AGG | 0.529031 | 8.4:-3227111 | MS.gene57766:CDS |
| AGTGCGCGCGGCAAACTTTG+AGG | 0.530370 | 8.4:+3226021 | None:intergenic |
| CTAATCTTCCAACCTCTACT+CGG | 0.532003 | 8.4:-3226324 | MS.gene57766:CDS |
| CTTTGCCGAAACTGCATGGG+CGG | 0.533622 | 8.4:-3229032 | MS.gene57766:CDS |
| AGAATGCTTGCCGTGACAAT+GGG | 0.537644 | 8.4:-3228745 | MS.gene57766:CDS |
| TTGTAATTTCACCAACTCCC+TGG | 0.539371 | 8.4:+3225961 | None:intergenic |
| CAGAATGCTTGCCGTGACAA+TGG | 0.542017 | 8.4:-3228746 | MS.gene57766:CDS |
| TTGTTTGGAGATTTCTTCAG+AGG | 0.547801 | 8.4:-3229177 | MS.gene57766:CDS |
| TTCCTCCAGCCTAAGGGTAA+GGG | 0.548812 | 8.4:+3227312 | None:intergenic |
| TGTCTTTGCCGAAACTGCAT+GGG | 0.548973 | 8.4:-3229035 | MS.gene57766:CDS |
| AATTATGAAGCTTCGTCAGA+AGG | 0.551043 | 8.4:-3226113 | MS.gene57766:CDS |
| ATCTCTGTTTGGCTTTAGTG+AGG | 0.554542 | 8.4:-3227114 | MS.gene57766:CDS |
| ACCACAGATGGTGGGAGGAG+TGG | 0.554774 | 8.4:-3226430 | MS.gene57766:CDS |
| GCTTCTGATTGGCAACATGC+AGG | 0.559066 | 8.4:-3227877 | MS.gene57766:intron |
| GTCCCTTACCCTTAGGCTGG+AGG | 0.561500 | 8.4:-3227314 | MS.gene57766:CDS |
| GGCAACAAATTTCAGCTCAT+CGG | 0.562924 | 8.4:+3226258 | None:intergenic |
| CTGCTGTAAAGTCAGGCTCA+GGG | 0.566862 | 8.4:+3225933 | None:intergenic |
| CTTGAGAGTGTTACCACAGA+TGG | 0.567620 | 8.4:-3226442 | MS.gene57766:CDS |
| ATATCGTCGCAAGTATCGCT+TGG | 0.567803 | 8.4:+3230096 | None:intergenic |
| GTGGTACTGGCAACACAGAT+AGG | 0.568795 | 8.4:+3230059 | None:intergenic |
| TTCACAGTCCGAGTAGAGGT+TGG | 0.569798 | 8.4:+3226316 | None:intergenic |
| CGCCTTCACAGTCCGAGTAG+AGG | 0.572148 | 8.4:+3226312 | None:intergenic |
| TTGAACGCAATGACTCATGC+TGG | 0.573357 | 8.4:-3228769 | MS.gene57766:CDS |
| AACAAATTTCAGCTCATCGG+CGG | 0.575197 | 8.4:+3226261 | None:intergenic |
| TATTCCTAGATTTCTTCGAA+TGG | 0.576328 | 8.4:-3229092 | MS.gene57766:CDS |
| TGGAGGAAATGAGAGTCAAA+AGG | 0.578064 | 8.4:-3227297 | MS.gene57766:CDS |
| ATTGAAAAGATAACCTCCCC+AGG | 0.578411 | 8.4:+3227933 | None:intergenic |
| CTAAAGGAGGCTGAGTTCTG+TGG | 0.580756 | 8.4:-3226388 | MS.gene57766:CDS |
| AATACTTATATTGTTCGGGA+AGG | 0.582365 | 8.4:-3226505 | MS.gene57766:CDS |
| TTTGCCGAAACTGCATGGGC+GGG | 0.583820 | 8.4:-3229031 | MS.gene57766:CDS |
| AGTTTGAAGCCCCTGACCAA+GGG | 0.585386 | 8.4:+3227965 | None:intergenic |
| ATTCCATAATCAAAAGGTGG+AGG | 0.588062 | 8.4:+3228614 | None:intergenic |
| ACCACTCCTCCCACCATCTG+TGG | 0.589869 | 8.4:+3226429 | None:intergenic |
| GTATGATCAATATAAGTGGT+TGG | 0.589892 | 8.4:-3227209 | MS.gene57766:CDS |
| AGAACCAGATCTGGGGTCCA+GGG | 0.590157 | 8.4:+3226345 | None:intergenic |
| TCTCATTTCCTCCAGCCTAA+GGG | 0.590500 | 8.4:+3227306 | None:intergenic |
| CATGGCTCTCCAATTTCGCA+CGG | 0.593225 | 8.4:-3230185 | MS.gene57766:CDS |
| GAGAGTGTTACCACAGATGG+TGG | 0.593359 | 8.4:-3226439 | MS.gene57766:CDS |
| GGCGGTATGATCAATATAAG+TGG | 0.596596 | 8.4:-3227213 | MS.gene57766:CDS |
| GTGAAGACGTCTAAACTGAC+TGG | 0.596611 | 8.4:+3226237 | None:intergenic |
| AAGAGCTTAGAGAGCGTGTG+AGG | 0.598434 | 8.4:-3227234 | MS.gene57766:CDS |
| GTATTCTCTGTAAATAAACA+TGG | 0.598980 | 8.4:+3226523 | None:intergenic |
| TAGTTTGAAGCCCCTGACCA+AGG | 0.599761 | 8.4:+3227964 | None:intergenic |
| TTTAGTTCAGAGTCTACCAA+AGG | 0.600713 | 8.4:-3227161 | MS.gene57766:CDS |
| ACTGCAGTACCCTTGGTCAG+GGG | 0.604670 | 8.4:-3227974 | MS.gene57766:intron |
| CAGTCTTGGCGAGTCGATTG+CGG | 0.604942 | 8.4:+3225984 | None:intergenic |
| GCTGTAAAGTCAGGCTCAGG+GGG | 0.609315 | 8.4:+3225935 | None:intergenic |
| TCAGAAGGAAGTCACGGCAA+CGG | 0.612473 | 8.4:-3226076 | MS.gene57766:CDS |
| AAAATTCCATAATCAAAAGG+TGG | 0.620323 | 8.4:+3228611 | None:intergenic |
| TGTGAGAACCAGCACACGGA+AGG | 0.621184 | 8.4:-3228701 | MS.gene57766:CDS |
| AGCTTAGAGAGCGTGTGAGG+CGG | 0.621829 | 8.4:-3227231 | MS.gene57766:CDS |
| CAGCCTCCTTTAGATATGTG+CGG | 0.623629 | 8.4:+3226398 | None:intergenic |
| TGATGTACTAGCAACAAAGC+AGG | 0.625485 | 8.4:-3229143 | MS.gene57766:CDS |
| TGCTGTAAAGTCAGGCTCAG+GGG | 0.626056 | 8.4:+3225934 | None:intergenic |
| GAAGAAGCGGATGAGTCAGA+AGG | 0.626874 | 8.4:-3226091 | MS.gene57766:CDS |
| AACCTCTACTCGGACTGTGA+AGG | 0.629479 | 8.4:-3226314 | MS.gene57766:CDS |
| CTCTCAACAATGGAGAACCT+GGG | 0.633749 | 8.4:-3226182 | MS.gene57766:CDS |
| CAACCGCACATATCTAAAGG+AGG | 0.635378 | 8.4:-3226401 | MS.gene57766:CDS |
| GCTTCGTCAGAAGGAAGAAG+CGG | 0.637094 | 8.4:-3226104 | MS.gene57766:CDS |
| TTTGCCGCGCGCACTCTCCG+TGG | 0.637809 | 8.4:-3226013 | MS.gene57766:CDS |
| AAAGGCGTGATTCAGAACAA+TGG | 0.640001 | 8.4:-3227279 | MS.gene57766:CDS |
| TGAAATGATACCAGATGACA+AGG | 0.640327 | 8.4:+3228580 | None:intergenic |
| GATGAGTCAGAAGGAAGTCA+CGG | 0.642746 | 8.4:-3226082 | MS.gene57766:CDS |
| TCGACTCGCCAAGACTGCCA+GGG | 0.646113 | 8.4:-3225978 | MS.gene57766:CDS |
| TATAAGTGGTTGGCAACACG+TGG | 0.647524 | 8.4:-3227199 | MS.gene57766:CDS |
| TGCCAATCAGAAGCGCGAAG+AGG | 0.647772 | 8.4:+3227886 | None:intergenic |
| GGAGGCTGAGTTCTGTGGGG+AGG | 0.650785 | 8.4:-3226383 | MS.gene57766:CDS |
| AAACTTTGAGGCTAATAAGG+CGG | 0.650978 | 8.4:+3226033 | None:intergenic |
| TACACCACGGAGAGTGCGCG+CGG | 0.651777 | 8.4:+3226009 | None:intergenic |
| AACTAGCACATATCCTGGGG+AGG | 0.659235 | 8.4:-3227946 | MS.gene57766:CDS |
| TAAGGCGGCACCAAGGCTGG+AGG | 0.661658 | 8.4:+3226048 | None:intergenic |
| GACTGTGAAGGCGTTAACAG+AGG | 0.662573 | 8.4:-3226302 | MS.gene57766:CDS |
| AGGCTAATAAGGCGGCACCA+AGG | 0.669575 | 8.4:+3226041 | None:intergenic |
| AGAGTGTTACCACAGATGGT+GGG | 0.670648 | 8.4:-3226438 | MS.gene57766:CDS |
| AAGCAAGATAATGAACAGCA+AGG | 0.671349 | 8.4:+3229120 | None:intergenic |
| GTCGATTGCGGTGTACACCA+CGG | 0.672348 | 8.4:+3225996 | None:intergenic |
| GTGTTACCACAGATGGTGGG+AGG | 0.679578 | 8.4:-3226435 | MS.gene57766:CDS |
| TCAAACTAGCACATATCCTG+GGG | 0.691393 | 8.4:-3227949 | MS.gene57766:CDS |
| GTATTGTGAGAACCAGCACA+CGG | 0.712309 | 8.4:-3228705 | MS.gene57766:CDS |
| GAAGATTAGAACCAGATCTG+GGG | 0.716370 | 8.4:+3226338 | None:intergenic |
| AAAGGAGGCTGAGTTCTGTG+GGG | 0.741818 | 8.4:-3226386 | MS.gene57766:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTATAAATTTTTCTAATA+TGG | - | chr8.4:3226467-3226486 | MS.gene57766:CDS | 10.0% |
| !!! | TGTTTTTTTTTTTTTTTTTG+GGG | - | chr8.4:3226249-3226268 | MS.gene57766:CDS | 10.0% |
| !! | AAAATTATTGAGCTAAAAAT+AGG | + | chr8.4:3226551-3226570 | None:intergenic | 15.0% |
| !! | AAATTAATTACCTTAAATTC+TGG | + | chr8.4:3227596-3227615 | None:intergenic | 15.0% |
| !! | AGAATATAAAAAGAAAACAA+AGG | + | chr8.4:3226893-3226912 | None:intergenic | 15.0% |
| !! | ATATATTATAAATGTTACTG+AGG | - | chr8.4:3228732-3228751 | MS.gene57766:CDS | 15.0% |
| !! | TAAGAAATATGATAAAATAG+AGG | - | chr8.4:3228311-3228330 | MS.gene57766:intron | 15.0% |
| !! | TTAAAAATTCCATAATCAAA+AGG | + | chr8.4:3227498-3227517 | None:intergenic | 15.0% |
| !!! | AATTCATTAACTTATTTTCA+TGG | - | chr8.4:3229489-3229508 | MS.gene57766:intron | 15.0% |
| !!! | GTTTTTTTTTTTTTTTTTGG+GGG | - | chr8.4:3226250-3226269 | MS.gene57766:CDS | 15.0% |
| !!! | TTTTCTACTGTAAAAATATT+TGG | + | chr8.4:3229111-3229130 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTTTTGGG+GGG | - | chr8.4:3226251-3226270 | MS.gene57766:CDS | 15.0% |
| !! | AAAAATATTTGGTCCTTTAT+CGG | + | chr8.4:3229100-3229119 | None:intergenic | 20.0% |
| !! | AAATATAGCAATTGTGAATA+TGG | + | chr8.4:3228376-3228395 | None:intergenic | 20.0% |
| !! | AAGAATAAGTGCAATAAAAT+TGG | - | chr8.4:3226327-3226346 | MS.gene57766:CDS | 20.0% |
| !! | ACAAATAATCAATGAAATCA+CGG | + | chr8.4:3228082-3228101 | None:intergenic | 20.0% |
| !! | CAAAATATCTTTACTGTTTA+TGG | - | chr8.4:3227562-3227581 | MS.gene57766:intron | 20.0% |
| !! | TAGAGATATCATGTATAAAT+AGG | + | chr8.4:3228426-3228445 | None:intergenic | 20.0% |
| !! | TATTTAATAGACCATATCAA+TGG | - | chr8.4:3227850-3227869 | MS.gene57766:intron | 20.0% |
| !! | TTAAAATTACAGTAGCAATA+AGG | + | chr8.4:3226845-3226864 | None:intergenic | 20.0% |
| !!! | AAGTAAGAAAGAAGTATTTT+TGG | + | chr8.4:3226775-3226794 | None:intergenic | 20.0% |
| !!! | ATATTTAAGTTTCTGTGTTA+TGG | - | chr8.4:3228588-3228607 | MS.gene57766:CDS | 20.0% |
| !!! | ATATTTTGTGATGAATTTCT+TGG | + | chr8.4:3227550-3227569 | None:intergenic | 20.0% |
| !!! | ATTTGAAACTATTGAAATTG+GGG | - | chr8.4:3226440-3226459 | MS.gene57766:CDS | 20.0% |
| !!! | GATTTGAAACTATTGAAATT+GGG | - | chr8.4:3226439-3226458 | MS.gene57766:CDS | 20.0% |
| !!! | TAGTATAAATGATGCTTTTT+GGG | - | chr8.4:3226600-3226619 | MS.gene57766:intron | 20.0% |
| !!! | TGATTTGAAACTATTGAAAT+TGG | - | chr8.4:3226438-3226457 | MS.gene57766:CDS | 20.0% |
| !!! | TTAGTATAAATGATGCTTTT+TGG | - | chr8.4:3226599-3226618 | MS.gene57766:intron | 20.0% |
| !!! | TTATTGCTACTGTAATTTTA+AGG | - | chr8.4:3226844-3226863 | MS.gene57766:intron | 20.0% |
| !!! | TTTGCTTTTCAAATTCTTTT+TGG | - | chr8.4:3229301-3229320 | MS.gene57766:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTTTGGGG+GGG | - | chr8.4:3226252-3226271 | MS.gene57766:CDS | 20.0% |
| ! | AAAAAAAACACTTACATGAC+TGG | + | chr8.4:3227130-3227149 | None:intergenic | 25.0% |
| ! | AAAATTCCATAATCAAAAGG+TGG | + | chr8.4:3227495-3227514 | None:intergenic | 25.0% |
| ! | AAACCTAACTTCAGAAATTA+AGG | + | chr8.4:3227712-3227731 | None:intergenic | 25.0% |
| ! | AAAGACCTAAAATACATTAG+TGG | + | chr8.4:3227261-3227280 | None:intergenic | 25.0% |
| ! | AAGTAAATGAAAATAGGTTG+TGG | + | chr8.4:3228108-3228127 | None:intergenic | 25.0% |
| ! | AATATCTTTACTGTTTATGG+TGG | - | chr8.4:3227565-3227584 | MS.gene57766:intron | 25.0% |
| ! | AATCGTACAGTATTTACAAA+AGG | + | chr8.4:3226104-3226123 | None:intergenic | 25.0% |
| ! | AGAGAATACTTATATTGTTC+GGG | - | chr8.4:3229594-3229613 | MS.gene57766:intron | 25.0% |
| ! | AGTTTCAAATCAAAGAAAAC+AGG | + | chr8.4:3226430-3226449 | None:intergenic | 25.0% |
| ! | ATAAAAAGAAAACAAAGGCA+AGG | + | chr8.4:3226888-3226907 | None:intergenic | 25.0% |
| ! | ATATCTTTACTGTTTATGGT+GGG | - | chr8.4:3227566-3227585 | MS.gene57766:intron | 25.0% |
| ! | CAAATAATCAATGAAATCAC+GGG | + | chr8.4:3228081-3228100 | None:intergenic | 25.0% |
| ! | CAGAGAATACTTATATTGTT+CGG | - | chr8.4:3229593-3229612 | MS.gene57766:intron | 25.0% |
| ! | GAAAATCAATCAGTGAAATA+AGG | + | chr8.4:3229393-3229412 | None:intergenic | 25.0% |
| ! | GAAATATGATAAAATAGAGG+AGG | - | chr8.4:3228314-3228333 | MS.gene57766:intron | 25.0% |
| ! | GGAGAATATAATATCATACT+TGG | - | chr8.4:3226348-3226367 | MS.gene57766:CDS | 25.0% |
| ! | GTATAAATAGGAGAATATGA+TGG | + | chr8.4:3228414-3228433 | None:intergenic | 25.0% |
| ! | GTATTCTCTGTAAATAAACA+TGG | + | chr8.4:3229583-3229602 | None:intergenic | 25.0% |
| ! | TAAAAAGAAAACAAAGGCAA+GGG | + | chr8.4:3226887-3226906 | None:intergenic | 25.0% |
| ! | TATACAACTCAAATAGAACA+AGG | + | chr8.4:3227180-3227199 | None:intergenic | 25.0% |
| ! | TATCTCAGAACTTCTTATAA+AGG | - | chr8.4:3227879-3227898 | MS.gene57766:CDS | 25.0% |
| ! | TATCTGCAAATAATCAGTAA+TGG | + | chr8.4:3227286-3227305 | None:intergenic | 25.0% |
| !! | AGTTTCTATGTCTAAAATAC+TGG | - | chr8.4:3227775-3227794 | MS.gene57766:intron | 25.0% |
| !! | ATATAGTGTTTGAGATTTGT+TGG | - | chr8.4:3229219-3229238 | MS.gene57766:intron | 25.0% |
| !!! | ACTTATTTTCATGGATTTGT+AGG | - | chr8.4:3229498-3229517 | MS.gene57766:intron | 25.0% |
| !!! | AGTTAAGGTCATTGATTTTA+TGG | - | chr8.4:3227752-3227771 | MS.gene57766:intron | 25.0% |
| !!! | CTGTACGATTATTTTTTCTT+CGG | - | chr8.4:3226114-3226133 | MS.gene57766:CDS | 25.0% |
| !!! | TATTTTTATACTCATGCAGA+AGG | + | chr8.4:3229202-3229221 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTTTTGGGGG+GGG | - | chr8.4:3226253-3226272 | MS.gene57766:CDS | 25.0% |
| AAGATAACAGAGAACATTGT+TGG | + | chr8.4:3226166-3226185 | None:intergenic | 30.0% | |
| AATACTTATATTGTTCGGGA+AGG | - | chr8.4:3229598-3229617 | MS.gene57766:intron | 30.0% | |
| AATAGACCATATCAATGGTA+GGG | - | chr8.4:3227855-3227874 | MS.gene57766:intron | 30.0% | |
| AATGACCTTAACTCAATTGA+AGG | + | chr8.4:3227745-3227764 | None:intergenic | 30.0% | |
| ACGTATCGTAAAAGTAAGAA+TGG | - | chr8.4:3228272-3228291 | MS.gene57766:intron | 30.0% | |
| ACTGATTATTTGCAGATAGT+TGG | - | chr8.4:3227288-3227307 | MS.gene57766:CDS | 30.0% | |
| ATGGTATTCTCTATTGTGAA+GGG | + | chr8.4:3228357-3228376 | None:intergenic | 30.0% | |
| ATTGTTAGGATGAGATAAGA+GGG | + | chr8.4:3228523-3228542 | None:intergenic | 30.0% | |
| CTTATCCTTCAATTGAGTTA+AGG | - | chr8.4:3227737-3227756 | MS.gene57766:intron | 30.0% | |
| CTTCATAGTTGAGAACTATA+TGG | - | chr8.4:3228616-3228635 | MS.gene57766:CDS | 30.0% | |
| GATTAAGTTAATCTACCAGA+GGG | + | chr8.4:3229440-3229459 | None:intergenic | 30.0% | |
| GCAGTGAAGTAAATGAAAAT+AGG | + | chr8.4:3228114-3228133 | None:intergenic | 30.0% | |
| GTATGATCAATATAAGTGGT+TGG | - | chr8.4:3228894-3228913 | MS.gene57766:intron | 30.0% | |
| GTGCTCATGTAAATAACATT+TGG | + | chr8.4:3228649-3228668 | None:intergenic | 30.0% | |
| TAATAGACCATATCAATGGT+AGG | - | chr8.4:3227854-3227873 | MS.gene57766:intron | 30.0% | |
| TATCTTTACTGTTTATGGTG+GGG | - | chr8.4:3227567-3227586 | MS.gene57766:intron | 30.0% | |
| TATGGTATTCTCTATTGTGA+AGG | + | chr8.4:3228358-3228377 | None:intergenic | 30.0% | |
| TATTCCTAGATTTCTTCGAA+TGG | - | chr8.4:3227011-3227030 | MS.gene57766:intron | 30.0% | |
| TGAAGATATGTCTGCAATAA+CGG | + | chr8.4:3228769-3228788 | None:intergenic | 30.0% | |
| TGAGAATATGAGTATGTGTT+AGG | + | chr8.4:3228564-3228583 | None:intergenic | 30.0% | |
| TGATTAAGTTAATCTACCAG+AGG | + | chr8.4:3229441-3229460 | None:intergenic | 30.0% | |
| TTTGTTAGGATATGGGATAA+GGG | + | chr8.4:3228497-3228516 | None:intergenic | 30.0% | |
| ! | ATATACTGAACCCTTATTTC+GGG | - | chr8.4:3226631-3226650 | MS.gene57766:intron | 30.0% |
| ! | CTTGTAATCAGATTGTTGTT+TGG | - | chr8.4:3226911-3226930 | MS.gene57766:intron | 30.0% |
| ! | GATATACTGAACCCTTATTT+CGG | - | chr8.4:3226630-3226649 | MS.gene57766:intron | 30.0% |
| ! | GCTCAATAATTTTTGTTAGC+TGG | - | chr8.4:3226558-3226577 | MS.gene57766:CDS | 30.0% |
| !! | CTCTTAAGTTCTGAAGTTAA+TGG | + | chr8.4:3227039-3227058 | None:intergenic | 30.0% |
| !! | GAACCTTAATTTCTGAAGTT+AGG | - | chr8.4:3227706-3227725 | MS.gene57766:intron | 30.0% |
| !! | TATAAATGATGCTTTTTGGG+TGG | - | chr8.4:3226603-3226622 | MS.gene57766:intron | 30.0% |
| !! | TGAGTTGATGAAATAGTTCA+TGG | + | chr8.4:3229277-3229296 | None:intergenic | 30.0% |
| !!! | ACTTGACTTTTTTCCGATAA+AGG | - | chr8.4:3229084-3229103 | MS.gene57766:CDS | 30.0% |
| !!! | TTTTTTTTTTTTTTGGGGGG+GGG | - | chr8.4:3226254-3226273 | MS.gene57766:CDS | 30.0% |
| AAACAGGTATGCAACAAGAT+TGG | + | chr8.4:3226414-3226433 | None:intergenic | 35.0% | |
| AAATTCGAAATTGATCCCTC+TGG | - | chr8.4:3229422-3229441 | MS.gene57766:intron | 35.0% | |
| AACTCCAAAAAGTCACATAG+AGG | + | chr8.4:3229344-3229363 | None:intergenic | 35.0% | |
| AAGCAAGATAATGAACAGCA+AGG | + | chr8.4:3226986-3227005 | None:intergenic | 35.0% | |
| AAGTCCAATACACTCTTATC+TGG | + | chr8.4:3227639-3227658 | None:intergenic | 35.0% | |
| AATTATGAAGCTTCGTCAGA+AGG | - | chr8.4:3229990-3230009 | MS.gene57766:intron | 35.0% | |
| AGATAACCCTACCATTGATA+TGG | + | chr8.4:3227864-3227883 | None:intergenic | 35.0% | |
| AGGATAACGAGGAGTTAAAT+AGG | + | chr8.4:3228458-3228477 | None:intergenic | 35.0% | |
| AGTAACAACATAGGATAACG+AGG | + | chr8.4:3228469-3228488 | None:intergenic | 35.0% | |
| ATAATCAATGAAATCACGGG+AGG | + | chr8.4:3228078-3228097 | None:intergenic | 35.0% | |
| ATATCTCTTCGAAGATCCTT+TGG | + | chr8.4:3228961-3228980 | None:intergenic | 35.0% | |
| ATCTTTACTGTTTATGGTGG+GGG | - | chr8.4:3227568-3227587 | MS.gene57766:intron | 35.0% | |
| ATGCAACAAGATTGGTGTAT+TGG | + | chr8.4:3226406-3226425 | None:intergenic | 35.0% | |
| ATTCCATAATCAAAAGGTGG+AGG | + | chr8.4:3227492-3227511 | None:intergenic | 35.0% | |
| CAAATAGAACAAGGAAGCAA+AGG | + | chr8.4:3227171-3227190 | None:intergenic | 35.0% | |
| CACTTATTCTTTCTTCTCTC+GGG | + | chr8.4:3226318-3226337 | None:intergenic | 35.0% | |
| GATTGTTAGGATGAGATAAG+AGG | + | chr8.4:3228524-3228543 | None:intergenic | 35.0% | |
| GCACTTATTCTTTCTTCTCT+CGG | + | chr8.4:3226319-3226338 | None:intergenic | 35.0% | |
| GCAGCGAAAATATTATCTCA+TGG | + | chr8.4:3226202-3226221 | None:intergenic | 35.0% | |
| GGATAACGAGGAGTTAAATA+GGG | + | chr8.4:3228457-3228476 | None:intergenic | 35.0% | |
| TAATCAATGAAATCACGGGA+GGG | + | chr8.4:3228077-3228096 | None:intergenic | 35.0% | |
| TACAGAGCAAAGTAATGAGT+GGG | + | chr8.4:3227682-3227701 | None:intergenic | 35.0% | |
| TATTAAGCGTCATCTCTGTT+TGG | - | chr8.4:3228978-3228997 | MS.gene57766:intron | 35.0% | |
| TCATCCATACTCTCAAATAG+TGG | + | chr8.4:3229526-3229545 | None:intergenic | 35.0% | |
| TCTCTTACGTGTGACTAAAA+AGG | - | chr8.4:3229061-3229080 | MS.gene57766:CDS | 35.0% | |
| TGAAACAAGCCAAAAAATGC+AGG | + | chr8.4:3227920-3227939 | None:intergenic | 35.0% | |
| TGAAATGATACCAGATGACA+AGG | + | chr8.4:3227526-3227545 | None:intergenic | 35.0% | |
| TGGTATTCTCTATTGTGAAG+GGG | + | chr8.4:3228356-3228375 | None:intergenic | 35.0% | |
| TTACAGAGCAAAGTAATGAG+TGG | + | chr8.4:3227683-3227702 | None:intergenic | 35.0% | |
| TTCAAACTAGCACATATCCT+GGG | - | chr8.4:3228153-3228172 | MS.gene57766:intron | 35.0% | |
| TTGGACATGTTAGTGAATGT+CGG | + | chr8.4:3226756-3226775 | None:intergenic | 35.0% | |
| TTGTTAGGATATGGGATAAG+GGG | + | chr8.4:3228496-3228515 | None:intergenic | 35.0% | |
| TTGTTTGGAGATTTCTTCAG+AGG | - | chr8.4:3226926-3226945 | MS.gene57766:intron | 35.0% | |
| TTTCAACCGCACATATCTAA+AGG | - | chr8.4:3229699-3229718 | MS.gene57766:intron | 35.0% | |
| ! | AGATAAGAGGGAAGTTTGTT+AGG | + | chr8.4:3228511-3228530 | None:intergenic | 35.0% |
| ! | CTCTGCCACTAATGTATTTT+AGG | - | chr8.4:3227253-3227272 | MS.gene57766:CDS | 35.0% |
| ! | GTTTGTTAGGATATGGGATA+AGG | + | chr8.4:3228498-3228517 | None:intergenic | 35.0% |
| ! | TCTCTCTTAGATTAGTTACC+TGG | - | chr8.4:3229250-3229269 | MS.gene57766:intron | 35.0% |
| ! | TTGTCCAGATAAGAGTGTAT+TGG | - | chr8.4:3227632-3227651 | MS.gene57766:intron | 35.0% |
| ! | TTTAGTTCAGAGTCTACCAA+AGG | - | chr8.4:3228942-3228961 | MS.gene57766:intron | 35.0% |
| !! | AAACTTTGAGGCTAATAAGG+CGG | + | chr8.4:3230073-3230092 | None:intergenic | 35.0% |
| !! | AGGGAAGTTTGTTAGGATAT+GGG | + | chr8.4:3228504-3228523 | None:intergenic | 35.0% |
| !! | ATGAAAAGCATCTCATCAAC+TGG | + | chr8.4:3229628-3229647 | None:intergenic | 35.0% |
| !!! | CTTGTTTTATTCAAGCAGCA+TGG | - | chr8.4:3229947-3229966 | MS.gene57766:intron | 35.0% |
| !!! | GTTCTAAAGCCTGCATTTTT+TGG | - | chr8.4:3227908-3227927 | MS.gene57766:CDS | 35.0% |
| !!! | TTTTGGCTTGTTTCACGTTT+TGG | - | chr8.4:3227925-3227944 | MS.gene57766:CDS | 35.0% |
| !!! | TTTTTTTTTTTTTGGGGGGG+GGG | - | chr8.4:3226255-3226274 | MS.gene57766:CDS | 35.0% |
| AACAAATTTCAGCTCATCGG+CGG | + | chr8.4:3229845-3229864 | None:intergenic | 40.0% | |
| AAGACAGTGAGGAGATTGTT+AGG | + | chr8.4:3228537-3228556 | None:intergenic | 40.0% | |
| AATAGAGGAGGATCTCTCTA+AGG | - | chr8.4:3228326-3228345 | MS.gene57766:intron | 40.0% | |
| AATCAATGAAATCACGGGAG+GGG | + | chr8.4:3228076-3228095 | None:intergenic | 40.0% | |
| ACAGAGCAAAGTAATGAGTG+GGG | + | chr8.4:3227681-3227700 | None:intergenic | 40.0% | |
| ACTGCACAACAACATCAATG+TGG | + | chr8.4:3229154-3229173 | None:intergenic | 40.0% | |
| AGAGCAAAGCGCATATTGTA+GGG | + | chr8.4:3228036-3228055 | None:intergenic | 40.0% | |
| AGGGGAGTTAGTAACAACAT+AGG | + | chr8.4:3228478-3228497 | None:intergenic | 40.0% | |
| AGTGTTTGCCTATTTGTCTG+TGG | + | chr8.4:3226379-3226398 | None:intergenic | 40.0% | |
| AGTTGAGAACTATATGGCTG+TGG | - | chr8.4:3228622-3228641 | MS.gene57766:CDS | 40.0% | |
| ATAGAGGAGGATCTCTCTAA+GGG | - | chr8.4:3228327-3228346 | MS.gene57766:intron | 40.0% | |
| ATTGAAAAGATAACCTCCCC+AGG | + | chr8.4:3228173-3228192 | None:intergenic | 40.0% | |
| CTAATCTTCCAACCTCTACT+CGG | - | chr8.4:3229779-3229798 | MS.gene57766:intron | 40.0% | |
| CTTCAAACTAGCACATATCC+TGG | - | chr8.4:3228152-3228171 | MS.gene57766:intron | 40.0% | |
| GAAGATTAGAACCAGATCTG+GGG | + | chr8.4:3229768-3229787 | None:intergenic | 40.0% | |
| GAGGAGTTAAATAGGGATGT+TGG | + | chr8.4:3228450-3228469 | None:intergenic | 40.0% | |
| GATGAAATAGTTCATGGACC+AGG | + | chr8.4:3229271-3229290 | None:intergenic | 40.0% | |
| GGAAGATTAGAACCAGATCT+GGG | + | chr8.4:3229769-3229788 | None:intergenic | 40.0% | |
| GGCAACAAATTTCAGCTCAT+CGG | + | chr8.4:3229848-3229867 | None:intergenic | 40.0% | |
| GGCGGTATGATCAATATAAG+TGG | - | chr8.4:3228890-3228909 | MS.gene57766:intron | 40.0% | |
| GGTACCATTCGAAGAAATCT+AGG | + | chr8.4:3227018-3227037 | None:intergenic | 40.0% | |
| GGTTCCACTATTTGAGAGTA+TGG | - | chr8.4:3229519-3229538 | MS.gene57766:intron | 40.0% | |
| TCAAACTAGCACATATCCTG+GGG | - | chr8.4:3228154-3228173 | MS.gene57766:intron | 40.0% | |
| TCAATAGCACTTGCCATATC+AGG | - | chr8.4:3228188-3228207 | MS.gene57766:intron | 40.0% | |
| TCAGAACTTAAGAGAACAGC+TGG | - | chr8.4:3227045-3227064 | MS.gene57766:intron | 40.0% | |
| TCCTATGAGTAAGAAGCAAG+AGG | + | chr8.4:3226228-3226247 | None:intergenic | 40.0% | |
| TCCTCTTGCTTCTTACTCAT+AGG | - | chr8.4:3226224-3226243 | MS.gene57766:CDS | 40.0% | |
| TGATGTACTAGCAACAAAGC+AGG | - | chr8.4:3226960-3226979 | MS.gene57766:intron | 40.0% | |
| TGGAAGATTAGAACCAGATC+TGG | + | chr8.4:3229770-3229789 | None:intergenic | 40.0% | |
| TGGAGGAAATGAGAGTCAAA+AGG | - | chr8.4:3228806-3228825 | MS.gene57766:intron | 40.0% | |
| TGGTTTCAGTCTCTCACATA+TGG | + | chr8.4:3229563-3229582 | None:intergenic | 40.0% | |
| TGTTAGGACATAAGACAGTG+AGG | + | chr8.4:3228548-3228567 | None:intergenic | 40.0% | |
| TTACGATACGTCAAGCTCAA+TGG | + | chr8.4:3228263-3228282 | None:intergenic | 40.0% | |
| TTGAATAAAACAAGCAGCCC+AGG | + | chr8.4:3229941-3229960 | None:intergenic | 40.0% | |
| TTGTAATTTCACCAACTCCC+TGG | + | chr8.4:3230145-3230164 | None:intergenic | 40.0% | |
| ! | AAAGGCGTGATTCAGAACAA+TGG | - | chr8.4:3228824-3228843 | MS.gene57766:intron | 40.0% |
| ! | ACAGAAGTCTTTTCAACCTG+TGG | + | chr8.4:3226066-3226085 | None:intergenic | 40.0% |
| ! | AGATGCTTTTCATCATACGC+GGG | - | chr8.4:3229635-3229654 | MS.gene57766:intron | 40.0% |
| ! | AGTGCCTCTATGTGACTTTT+TGG | - | chr8.4:3229337-3229356 | MS.gene57766:intron | 40.0% |
| ! | AGTGTATTGGACTTCCCTTT+TGG | - | chr8.4:3227645-3227664 | MS.gene57766:intron | 40.0% |
| ! | GAGATGCTTTTCATCATACG+CGG | - | chr8.4:3229634-3229653 | MS.gene57766:intron | 40.0% |
| ! | TTTAAGCAAGCCTTGTCATC+TGG | - | chr8.4:3227513-3227532 | MS.gene57766:intron | 40.0% |
| ! | TTTTGTTGCACCCATTGTCA+CGG | + | chr8.4:3227371-3227390 | None:intergenic | 40.0% |
| !! | ATCTCTGTTTGGCTTTAGTG+AGG | - | chr8.4:3228989-3229008 | MS.gene57766:intron | 40.0% |
| !! | CAGAGAACATTGTTGGTAGT+TGG | + | chr8.4:3226159-3226178 | None:intergenic | 40.0% |
| !! | GAGGGAAGTTTGTTAGGATA+TGG | + | chr8.4:3228505-3228524 | None:intergenic | 40.0% |
| !! | GATCCTCCACCTTTTGATTA+TGG | - | chr8.4:3227486-3227505 | MS.gene57766:intron | 40.0% |
| !! | GGCAAACTTTGAGGCTAATA+AGG | + | chr8.4:3230076-3230095 | None:intergenic | 40.0% |
| !! | TGCAGATAGTTGGTGCTTTT+TGG | - | chr8.4:3227298-3227317 | MS.gene57766:CDS | 40.0% |
| !!! | ACACGTAAGAGAGAGTGTTT+TGG | + | chr8.4:3229053-3229072 | None:intergenic | 40.0% |
| !!! | AGCTTTGCTTTTGTTTTGCC+AGG | + | chr8.4:3227436-3227455 | None:intergenic | 40.0% |
| !!! | ATGATGCTTTTTGGGTGGAT+TGG | - | chr8.4:3226608-3226627 | MS.gene57766:intron | 40.0% |
| !!! | TTTTTTTTTTTTGGGGGGGG+GGG | - | chr8.4:3226256-3226275 | MS.gene57766:CDS | 40.0% |
| AAGCGCATATTGTAGGGATC+TGG | + | chr8.4:3228030-3228049 | None:intergenic | 45.0% | |
| ACTCTCAACAATGGAGAACC+TGG | - | chr8.4:3229920-3229939 | MS.gene57766:intron | 45.0% | |
| AGAATGCTTGCCGTGACAAT+GGG | - | chr8.4:3227358-3227377 | MS.gene57766:intron | 45.0% | |
| ATCAATGAAATCACGGGAGG+GGG | + | chr8.4:3228075-3228094 | None:intergenic | 45.0% | |
| ATCTTCAGTCCCTTACCCTT+AGG | - | chr8.4:3228782-3228801 | MS.gene57766:CDS | 45.0% | |
| CAACCGCACATATCTAAAGG+AGG | - | chr8.4:3229702-3229721 | MS.gene57766:intron | 45.0% | |
| CAATGTAAGCCGTGCGAAAT+TGG | + | chr8.4:3225930-3225949 | None:intergenic | 45.0% | |
| CAGCCTCCTTTAGATATGTG+CGG | + | chr8.4:3229708-3229727 | None:intergenic | 45.0% | |
| CCTTGTCTCTCCCGAAATAA+GGG | + | chr8.4:3226644-3226663 | None:intergenic | 45.0% | |
| CTCCATCATCTCGTGTCTTT+GGG | - | chr8.4:3225950-3225969 | MS.gene57766:CDS | 45.0% | |
| CTCTCAACAATGGAGAACCT+GGG | - | chr8.4:3229921-3229940 | MS.gene57766:intron | 45.0% | |
| GAAGAGGATGAGACCTGATA+TGG | + | chr8.4:3228204-3228223 | None:intergenic | 45.0% | |
| GAGAGCAAAGCGCATATTGT+AGG | + | chr8.4:3228037-3228056 | None:intergenic | 45.0% | |
| GATGAGTCAGAAGGAAGTCA+CGG | - | chr8.4:3230021-3230040 | MS.gene57766:intron | 45.0% | |
| GCATCATCTGCTGTAAAGTC+AGG | + | chr8.4:3230180-3230199 | None:intergenic | 45.0% | |
| GGGGTGATTATGCACCAAAA+GGG | + | chr8.4:3227662-3227681 | None:intergenic | 45.0% | |
| GTATTGTGAGAACCAGCACA+CGG | - | chr8.4:3227398-3227417 | MS.gene57766:intron | 45.0% | |
| GTGAAGACGTCTAAACTGAC+TGG | + | chr8.4:3229869-3229888 | None:intergenic | 45.0% | |
| TAAAGGAGGCTGAGTTCTGT+GGG | - | chr8.4:3229716-3229735 | MS.gene57766:intron | 45.0% | |
| TAGACGTCTTCACAGTAGAC+AGG | - | chr8.4:3229876-3229895 | MS.gene57766:intron | 45.0% | |
| TATAAGTGGTTGGCAACACG+TGG | - | chr8.4:3228904-3228923 | MS.gene57766:intron | 45.0% | |
| TCCTTGTCTCTCCCGAAATA+AGG | + | chr8.4:3226645-3226664 | None:intergenic | 45.0% | |
| TCTCATTTCCTCCAGCCTAA+GGG | + | chr8.4:3228800-3228819 | None:intergenic | 45.0% | |
| TGGCAATGCCACAGACAAAT+AGG | - | chr8.4:3226368-3226387 | MS.gene57766:CDS | 45.0% | |
| TGGGGTGATTATGCACCAAA+AGG | + | chr8.4:3227663-3227682 | None:intergenic | 45.0% | |
| TGTCTTTGCCGAAACTGCAT+GGG | - | chr8.4:3227068-3227087 | MS.gene57766:intron | 45.0% | |
| TTACTTCACTGCAGTACCCT+TGG | - | chr8.4:3228122-3228141 | MS.gene57766:intron | 45.0% | |
| TTGAACGCAATGACTCATGC+TGG | - | chr8.4:3227334-3227353 | MS.gene57766:intron | 45.0% | |
| ! | ACACGCTCTCTAAGCTCTTT+TGG | + | chr8.4:3228868-3228887 | None:intergenic | 45.0% |
| ! | AGAGTGTTACCACAGATGGT+GGG | - | chr8.4:3229665-3229684 | MS.gene57766:intron | 45.0% |
| ! | ATATCGTCGCAAGTATCGCT+TGG | + | chr8.4:3226010-3226029 | None:intergenic | 45.0% |
| ! | CACGCTCTCTAAGCTCTTTT+GGG | + | chr8.4:3228867-3228886 | None:intergenic | 45.0% |
| ! | GTCTTTTCAACCTGTGGTAC+TGG | + | chr8.4:3226060-3226079 | None:intergenic | 45.0% |
| ! | TGGGGAGGAGCTTTTAACAT+GGG | - | chr8.4:3229735-3229754 | MS.gene57766:intron | 45.0% |
| !! | CTGTTTGGCTTTAGTGAGGA+GGG | - | chr8.4:3228993-3229012 | MS.gene57766:CDS | 45.0% |
| !! | CTTGAGAGTGTTACCACAGA+TGG | - | chr8.4:3229661-3229680 | MS.gene57766:intron | 45.0% |
| !! | TCTGTTTGGCTTTAGTGAGG+AGG | - | chr8.4:3228992-3229011 | MS.gene57766:CDS | 45.0% |
| !!! | TTTTTTTTTTTGGGGGGGGG+GGG | - | chr8.4:3226257-3226276 | MS.gene57766:CDS | 45.0% |
| !!! | AATGTTTTTTTTTTTTTTTT+TGG | - | chr8.4:3226247-3226266 | MS.gene57766:CDS | 5.0% |
| !!! | ATGTTTTTTTTTTTTTTTTT+GGG | - | chr8.4:3226248-3226267 | MS.gene57766:CDS | 5.0% |
| AAAGGAGGCTGAGTTCTGTG+GGG | - | chr8.4:3229717-3229736 | MS.gene57766:intron | 50.0% | |
| AACCTCTACTCGGACTGTGA+AGG | - | chr8.4:3229789-3229808 | MS.gene57766:intron | 50.0% | |
| AACTAGCACATATCCTGGGG+AGG | - | chr8.4:3228157-3228176 | MS.gene57766:intron | 50.0% | |
| ACACGGAAGGTTATAGTGCC+TGG | - | chr8.4:3227415-3227434 | MS.gene57766:intron | 50.0% | |
| ATCATCTCGTGTCTTTGGGC+GGG | - | chr8.4:3225954-3225973 | MS.gene57766:CDS | 50.0% | |
| ATCCTCTTCGCGCTTCTGAT+TGG | - | chr8.4:3228215-3228234 | MS.gene57766:intron | 50.0% | |
| ATCTGTGTTGCCAGTACCAC+AGG | - | chr8.4:3226047-3226066 | MS.gene57766:CDS | 50.0% | |
| CACTATAACCTTCCGTGTGC+TGG | + | chr8.4:3227413-3227432 | None:intergenic | 50.0% | |
| CAGAATGCTTGCCGTGACAA+TGG | - | chr8.4:3227357-3227376 | MS.gene57766:intron | 50.0% | |
| CATCATCTCGTGTCTTTGGG+CGG | - | chr8.4:3225953-3225972 | MS.gene57766:CDS | 50.0% | |
| CTAAAGGAGGCTGAGTTCTG+TGG | - | chr8.4:3229715-3229734 | MS.gene57766:intron | 50.0% | |
| CTCTCATTTCCTCCAGCCTA+AGG | + | chr8.4:3228801-3228820 | None:intergenic | 50.0% | |
| CTGCTGTAAAGTCAGGCTCA+GGG | + | chr8.4:3230173-3230192 | None:intergenic | 50.0% | |
| GAAGAAGCGGATGAGTCAGA+AGG | - | chr8.4:3230012-3230031 | MS.gene57766:intron | 50.0% | |
| GCTCCATCATCTCGTGTCTT+TGG | - | chr8.4:3225949-3225968 | MS.gene57766:CDS | 50.0% | |
| GCTTCGTCAGAAGGAAGAAG+CGG | - | chr8.4:3229999-3230018 | MS.gene57766:intron | 50.0% | |
| GCTTCTGATTGGCAACATGC+AGG | - | chr8.4:3228226-3228245 | MS.gene57766:intron | 50.0% | |
| GGGCGAGCTTGTGATAGATT+CGG | - | chr8.4:3225975-3225994 | MS.gene57766:CDS | 50.0% | |
| GTGTCTTTGCCGAAACTGCA+TGG | - | chr8.4:3227067-3227086 | MS.gene57766:intron | 50.0% | |
| TCAATGAAATCACGGGAGGG+GGG | + | chr8.4:3228074-3228093 | None:intergenic | 50.0% | |
| TCAGAAGGAAGTCACGGCAA+CGG | - | chr8.4:3230027-3230046 | MS.gene57766:intron | 50.0% | |
| TCTGCTGTAAAGTCAGGCTC+AGG | + | chr8.4:3230174-3230193 | None:intergenic | 50.0% | |
| TGCTGTAAAGTCAGGCTCAG+GGG | + | chr8.4:3230172-3230191 | None:intergenic | 50.0% | |
| TTCACAGTCCGAGTAGAGGT+TGG | + | chr8.4:3229790-3229809 | None:intergenic | 50.0% | |
| TTCCTCCAGCCTAAGGGTAA+GGG | + | chr8.4:3228794-3228813 | None:intergenic | 50.0% | |
| TTTCAGCTCATCGGCGGTTA+AGG | + | chr8.4:3229839-3229858 | None:intergenic | 50.0% | |
| TTTCCTCCAGCCTAAGGGTA+AGG | + | chr8.4:3228795-3228814 | None:intergenic | 50.0% | |
| ! | AAGAGCTTAGAGAGCGTGTG+AGG | - | chr8.4:3228869-3228888 | MS.gene57766:intron | 50.0% |
| ! | AGTTTGAAGCCCCTGACCAA+GGG | + | chr8.4:3228141-3228160 | None:intergenic | 50.0% |
| ! | CCCTTATTTCGGGAGAGACA+AGG | - | chr8.4:3226641-3226660 | MS.gene57766:intron | 50.0% |
| ! | GTGGGGAGGAGCTTTTAACA+TGG | - | chr8.4:3229734-3229753 | MS.gene57766:intron | 50.0% |
| ! | TAGTTTGAAGCCCCTGACCA+AGG | + | chr8.4:3228142-3228161 | None:intergenic | 50.0% |
| !! | GACTGTGAAGGCGTTAACAG+AGG | - | chr8.4:3229801-3229820 | MS.gene57766:intron | 50.0% |
| !! | GAGAGTGTTACCACAGATGG+TGG | - | chr8.4:3229664-3229683 | MS.gene57766:intron | 50.0% |
| !! | GTGGTACTGGCAACACAGAT+AGG | + | chr8.4:3226047-3226066 | None:intergenic | 50.0% |
| ACTGCAGTACCCTTGGTCAG+GGG | - | chr8.4:3228129-3228148 | MS.gene57766:intron | 55.0% | |
| AGGCTAATAAGGCGGCACCA+AGG | + | chr8.4:3230065-3230084 | None:intergenic | 55.0% | |
| CACTGCAGTACCCTTGGTCA+GGG | - | chr8.4:3228128-3228147 | MS.gene57766:intron | 55.0% | |
| CAGTCTTGGCGAGTCGATTG+CGG | + | chr8.4:3230122-3230141 | None:intergenic | 55.0% | |
| CGCCCAAAGACACGAGATGA+TGG | + | chr8.4:3225955-3225974 | None:intergenic | 55.0% | |
| CTTTGCCGAAACTGCATGGG+CGG | - | chr8.4:3227071-3227090 | MS.gene57766:intron | 55.0% | |
| GCTGTAAAGTCAGGCTCAGG+GGG | + | chr8.4:3230171-3230190 | None:intergenic | 55.0% | |
| GGTGGGGGCTCCAGAATTTA+AGG | - | chr8.4:3227583-3227602 | MS.gene57766:intron | 55.0% | |
| GTCGATTGCGGTGTACACCA+CGG | + | chr8.4:3230110-3230129 | None:intergenic | 55.0% | |
| TAATAAGGCGGCACCAAGGC+TGG | + | chr8.4:3230061-3230080 | None:intergenic | 55.0% | |
| TCACTGCAGTACCCTTGGTC+AGG | - | chr8.4:3228127-3228146 | MS.gene57766:intron | 55.0% | |
| TCAGTCCCTTACCCTTAGGC+TGG | - | chr8.4:3228786-3228805 | MS.gene57766:CDS | 55.0% | |
| TCATCTCGTGTCTTTGGGCG+GGG | - | chr8.4:3225955-3225974 | MS.gene57766:CDS | 55.0% | |
| TGTGAGAACCAGCACACGGA+AGG | - | chr8.4:3227402-3227421 | MS.gene57766:intron | 55.0% | |
| TTTGCCGAAACTGCATGGGC+GGG | - | chr8.4:3227072-3227091 | MS.gene57766:intron | 55.0% | |
| ! | AGAACCAGATCTGGGGTCCA+GGG | + | chr8.4:3229761-3229780 | None:intergenic | 55.0% |
| ! | AGCTTAGAGAGCGTGTGAGG+CGG | - | chr8.4:3228872-3228891 | MS.gene57766:intron | 55.0% |
| ! | GGAGCTTTTAACATGGGCCC+TGG | - | chr8.4:3229741-3229760 | MS.gene57766:intron | 55.0% |
| ! | TAGAACCAGATCTGGGGTCC+AGG | + | chr8.4:3229762-3229781 | None:intergenic | 55.0% |
| ! | TGCCAATCAGAAGCGCGAAG+AGG | + | chr8.4:3228220-3228239 | None:intergenic | 55.0% |
| !! | GTGTTACCACAGATGGTGGG+AGG | - | chr8.4:3229668-3229687 | MS.gene57766:intron | 55.0% |
| AACGGCAGTTCCTCCAGCCT+TGG | - | chr8.4:3230045-3230064 | MS.gene57766:intron | 60.0% | |
| ACCACTCCTCCCACCATCTG+TGG | + | chr8.4:3229677-3229696 | None:intergenic | 60.0% | |
| AGCACCCGCCCATGCAGTTT+CGG | + | chr8.4:3227079-3227098 | None:intergenic | 60.0% | |
| AGTGCGCGCGGCAAACTTTG+AGG | + | chr8.4:3230085-3230104 | None:intergenic | 60.0% | |
| CACCAACTCCCTGGCAGTCT+TGG | + | chr8.4:3230136-3230155 | None:intergenic | 60.0% | |
| CGCCTTCACAGTCCGAGTAG+AGG | + | chr8.4:3229794-3229813 | None:intergenic | 60.0% | |
| GTCCCTTACCCTTAGGCTGG+AGG | - | chr8.4:3228789-3228808 | MS.gene57766:CDS | 60.0% | |
| ! | TCGACTCGCCAAGACTGCCA+GGG | - | chr8.4:3230125-3230144 | MS.gene57766:CDS | 60.0% |
| !! | ACCACAGATGGTGGGAGGAG+TGG | - | chr8.4:3229673-3229692 | MS.gene57766:intron | 60.0% |
| !! | ATCGACTCGCCAAGACTGCC+AGG | - | chr8.4:3230124-3230143 | MS.gene57766:CDS | 60.0% |
| !! | GGGGGGGTTAGTTGGTAGGA+GGG | - | chr8.4:3226273-3226292 | MS.gene57766:CDS | 60.0% |
| CGCCAAGACTGCCAGGGAGT+TGG | - | chr8.4:3230131-3230150 | MS.gene57766:CDS | 65.0% | |
| GGAGGCTGAGTTCTGTGGGG+AGG | - | chr8.4:3229720-3229739 | MS.gene57766:intron | 65.0% | |
| TAAGGCGGCACCAAGGCTGG+AGG | + | chr8.4:3230058-3230077 | None:intergenic | 65.0% | |
| ! | TACACCACGGAGAGTGCGCG+CGG | + | chr8.4:3230097-3230116 | None:intergenic | 65.0% |
| ! | TTTGGGGGGGGGGGGTTAGT+TGG | - | chr8.4:3226265-3226284 | MS.gene57766:CDS | 65.0% |
| !! | GGGGGGGGTTAGTTGGTAGG+AGG | - | chr8.4:3226272-3226291 | MS.gene57766:CDS | 65.0% |
| TGGGCCCTGGACCCCAGATC+TGG | - | chr8.4:3229754-3229773 | MS.gene57766:intron | 70.0% | |
| TTTGCCGCGCGCACTCTCCG+TGG | - | chr8.4:3230090-3230109 | MS.gene57766:CDS | 70.0% | |
| !! | GGGGGGGGGGGTTAGTTGGT+AGG | - | chr8.4:3226269-3226288 | MS.gene57766:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 3225919 | 3230206 | 3225919 | ID=MS.gene57766 |
| chr8.4 | mRNA | 3225919 | 3230206 | 3225919 | ID=MS.gene57766.t1;Parent=MS.gene57766 |
| chr8.4 | exon | 3230057 | 3230206 | 3230057 | ID=MS.gene57766.t1.exon1;Parent=MS.gene57766.t1 |
| chr8.4 | CDS | 3230057 | 3230206 | 3230057 | ID=cds.MS.gene57766.t1;Parent=MS.gene57766.t1 |
| chr8.4 | exon | 3228991 | 3229203 | 3228991 | ID=MS.gene57766.t1.exon2;Parent=MS.gene57766.t1 |
| chr8.4 | CDS | 3228991 | 3229203 | 3228991 | ID=cds.MS.gene57766.t1;Parent=MS.gene57766.t1 |
| chr8.4 | exon | 3228521 | 3228822 | 3228521 | ID=MS.gene57766.t1.exon3;Parent=MS.gene57766.t1 |
| chr8.4 | CDS | 3228521 | 3228822 | 3228521 | ID=cds.MS.gene57766.t1;Parent=MS.gene57766.t1 |
| chr8.4 | exon | 3227878 | 3227989 | 3227878 | ID=MS.gene57766.t1.exon4;Parent=MS.gene57766.t1 |
| chr8.4 | CDS | 3227878 | 3227989 | 3227878 | ID=cds.MS.gene57766.t1;Parent=MS.gene57766.t1 |
| chr8.4 | exon | 3227111 | 3227347 | 3227111 | ID=MS.gene57766.t1.exon5;Parent=MS.gene57766.t1 |
| chr8.4 | CDS | 3227111 | 3227347 | 3227111 | ID=cds.MS.gene57766.t1;Parent=MS.gene57766.t1 |
| chr8.4 | exon | 3225919 | 3226605 | 3225919 | ID=MS.gene57766.t1.exon6;Parent=MS.gene57766.t1 |
| chr8.4 | CDS | 3225919 | 3226605 | 3225919 | ID=cds.MS.gene57766.t1;Parent=MS.gene57766.t1 |
| Gene Sequence |
| Protein sequence |
