Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58193.t1 | XP_003610270.1 | 98.6 | 794 | 11 | 0 | 1 | 794 | 1 | 794 | 0.00E+00 | 1537.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58193.t1 | Q9SUG7 | 61.4 | 795 | 289 | 6 | 1 | 794 | 1 | 778 | 8.7e-270 | 931.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58193.t1 | A0A072USH3 | 98.6 | 794 | 11 | 0 | 1 | 794 | 1 | 794 | 0.0e+00 | 1537.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene58193 | 0.80482 | 1.80E-49 | -1.69E-46 |
| MS.gene049744 | MS.gene58193 | 0.829671 | 4.52E-55 | -1.69E-46 |
| MS.gene049983 | MS.gene58193 | 0.820612 | 6.26E-53 | -1.69E-46 |
| MS.gene050361 | MS.gene58193 | 0.805863 | 1.09E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene58193 | 0.805361 | 1.39E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene58193 | 0.831525 | 1.59E-55 | -1.69E-46 |
| MS.gene050654 | MS.gene58193 | 0.818166 | 2.26E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene58193 | 0.826826 | 2.19E-54 | -1.69E-46 |
| MS.gene051209 | MS.gene58193 | 0.840856 | 6.76E-58 | -1.69E-46 |
| MS.gene051800 | MS.gene58193 | 0.853452 | 2.37E-61 | -1.69E-46 |
| MS.gene052239 | MS.gene58193 | -0.831074 | 2.05E-55 | -1.69E-46 |
| MS.gene052242 | MS.gene58193 | -0.811753 | 5.98E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene58193 | 0.821219 | 4.54E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene58193 | 0.860155 | 2.52E-63 | -1.69E-46 |
| MS.gene052675 | MS.gene58193 | 0.801047 | 1.08E-48 | -1.69E-46 |
| MS.gene052677 | MS.gene58193 | 0.809378 | 1.95E-50 | -1.69E-46 |
| MS.gene052775 | MS.gene58193 | 0.82888 | 7.03E-55 | -1.69E-46 |
| MS.gene052776 | MS.gene58193 | 0.856659 | 2.77E-62 | -1.69E-46 |
| MS.gene052994 | MS.gene58193 | 0.812003 | 5.27E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene58193 | 0.828662 | 7.94E-55 | -1.69E-46 |
| MS.gene053486 | MS.gene58193 | 0.875067 | 4.13E-68 | -1.69E-46 |
| MS.gene053620 | MS.gene58193 | 0.822046 | 2.92E-53 | -1.69E-46 |
| MS.gene054641 | MS.gene58193 | 0.802329 | 5.91E-49 | -1.69E-46 |
| MS.gene054709 | MS.gene58193 | 0.805827 | 1.11E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene58193 | 0.801019 | 1.10E-48 | -1.69E-46 |
| MS.gene054893 | MS.gene58193 | 0.805706 | 1.17E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene58193 | 0.803911 | 2.78E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene58193 | 0.828665 | 7.93E-55 | -1.69E-46 |
| MS.gene05615 | MS.gene58193 | 0.809033 | 2.31E-50 | -1.69E-46 |
| MS.gene056507 | MS.gene58193 | 0.856059 | 4.16E-62 | -1.69E-46 |
| MS.gene056519 | MS.gene58193 | 0.835739 | 1.41E-56 | -1.69E-46 |
| MS.gene056622 | MS.gene58193 | 0.832137 | 1.12E-55 | -1.69E-46 |
| MS.gene05686 | MS.gene58193 | 0.818428 | 1.97E-52 | -1.69E-46 |
| MS.gene056973 | MS.gene58193 | 0.872201 | 3.81E-67 | -1.69E-46 |
| MS.gene057174 | MS.gene58193 | 0.823036 | 1.72E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene58193 | 0.820399 | 7.00E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene58193 | 0.828628 | 8.09E-55 | -1.69E-46 |
| MS.gene058081 | MS.gene58193 | 0.835474 | 1.64E-56 | -1.69E-46 |
| MS.gene058289 | MS.gene58193 | 0.86395 | 1.73E-64 | -1.69E-46 |
| MS.gene058292 | MS.gene58193 | 0.825987 | 3.47E-54 | -1.69E-46 |
| MS.gene058647 | MS.gene58193 | 0.804149 | 2.48E-49 | -1.69E-46 |
| MS.gene058919 | MS.gene58193 | 0.835515 | 1.60E-56 | -1.69E-46 |
| MS.gene059007 | MS.gene58193 | 0.815852 | 7.47E-52 | -1.69E-46 |
| MS.gene059439 | MS.gene58193 | 0.823633 | 1.25E-53 | -1.69E-46 |
| MS.gene060373 | MS.gene58193 | 0.804841 | 1.78E-49 | -1.69E-46 |
| MS.gene060520 | MS.gene58193 | 0.800864 | 1.18E-48 | -1.69E-46 |
| MS.gene060785 | MS.gene58193 | 0.806367 | 8.51E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene58193 | 0.852073 | 5.86E-61 | -1.69E-46 |
| MS.gene060937 | MS.gene58193 | 0.814041 | 1.89E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58193.t1 | MTR_4g130370 | 98.615 | 794 | 11 | 0 | 1 | 794 | 1 | 794 | 0.0 | 1626 |
| MS.gene58193.t1 | MTR_4g130370 | 98.615 | 794 | 11 | 0 | 1 | 794 | 1 | 794 | 0.0 | 1625 |
| MS.gene58193.t1 | MTR_4g130370 | 98.615 | 794 | 11 | 0 | 1 | 794 | 1 | 794 | 0.0 | 1625 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58193.t1 | AT4G30790 | 61.258 | 795 | 290 | 6 | 1 | 794 | 1 | 778 | 0.0 | 968 |
Find 186 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGATCTTCTGGTAAATTT+TGG | 0.102330 | 8.2:-4674020 | MS.gene58193:CDS |
| GTTCGACAGGATGGTTTATT+TGG | 0.139495 | 8.2:-4672639 | MS.gene58193:CDS |
| TGCTTTGGATCCTGCTTTAA+AGG | 0.160067 | 8.2:-4674270 | MS.gene58193:CDS |
| TTTCTTGGCCACCAAGAATT+TGG | 0.171974 | 8.2:-4673781 | MS.gene58193:CDS |
| GCTGAGGCTGTAGATATTTC+AGG | 0.199531 | 8.2:-4672219 | MS.gene58193:CDS |
| GTTGACCATTGGGCCTTTCT+TGG | 0.219906 | 8.2:-4673796 | MS.gene58193:CDS |
| GGAAGTTGCAAGGTGTAATT+TGG | 0.237231 | 8.2:-4674117 | MS.gene58193:CDS |
| CAGGGATGTGTTATCATCTA+TGG | 0.242726 | 8.2:-4672427 | MS.gene58193:CDS |
| TCACAATTTAAGCAGAGTTT+TGG | 0.265029 | 8.2:-4673846 | MS.gene58193:CDS |
| GCCGACTTTCCTCTTCTTGC+TGG | 0.295700 | 8.2:-4671814 | MS.gene58193:CDS |
| ATTCTCAACCTCCATCTTGC+AGG | 0.295907 | 8.2:+4672128 | None:intergenic |
| ATATAGCAGGGGCTACTTAC+AGG | 0.297371 | 8.2:-4672302 | MS.gene58193:CDS |
| TGTGAATCGTAAATGCTTAC+TGG | 0.300387 | 8.2:-4673946 | MS.gene58193:CDS |
| AATTGCTTGCTCCAAATTCT+TGG | 0.301452 | 8.2:+4673770 | None:intergenic |
| CAAAGCAGGGTGAAGTTTGA+TGG | 0.314597 | 8.2:+4673974 | None:intergenic |
| CAGAATGCACTCTGATCTTC+TGG | 0.319306 | 8.2:-4674030 | MS.gene58193:CDS |
| CTTCTTATGAGAGACAATTT+AGG | 0.324939 | 8.2:-4674241 | MS.gene58193:CDS |
| CACTGCTTTGCATTTCTTCA+CGG | 0.332909 | 8.2:+4671557 | None:intergenic |
| TTCGACAGGATGGTTTATTT+GGG | 0.339262 | 8.2:-4672638 | MS.gene58193:CDS |
| TCATGAAATCCCCGTAGTTT+TGG | 0.342607 | 8.2:+4674072 | None:intergenic |
| CGAGAAACGTATTCAAGAAT+TGG | 0.345871 | 8.2:-4671896 | MS.gene58193:CDS |
| TTCCAGCATCACCGGAAGTT+TGG | 0.352397 | 8.2:-4674633 | MS.gene58193:CDS |
| CGGTCTATTGAATCTGTTAC+CGG | 0.356690 | 8.2:-4674518 | MS.gene58193:CDS |
| TGATCAGCTTGTTCTTTGTT+CGG | 0.381181 | 8.2:-4674483 | MS.gene58193:CDS |
| AGATAAGATAGCCGGACAAT+TGG | 0.381849 | 8.2:-4671521 | MS.gene58193:CDS |
| CATGGGCATGGCTGGCCAAT+TGG | 0.383139 | 8.2:-4672529 | MS.gene58193:CDS |
| TCGTAAATGCTTACTGGATT+TGG | 0.385376 | 8.2:-4673940 | MS.gene58193:CDS |
| CATGATGCAGTTTCAGCCTT+GGG | 0.385423 | 8.2:-4672864 | MS.gene58193:CDS |
| ACACCCTCTTGATGATGCTT+TGG | 0.388691 | 8.2:-4674285 | MS.gene58193:CDS |
| CGATTCACAGTTTGCAAAGC+AGG | 0.390186 | 8.2:+4673960 | None:intergenic |
| GTCGAAGACTTGTTGACCAT+TGG | 0.392228 | 8.2:-4673807 | MS.gene58193:CDS |
| GAAAACATGTTGGATTCATC+TGG | 0.394007 | 8.2:-4671622 | MS.gene58193:CDS |
| TTAAAATTGTTCCACAGTAT+TGG | 0.408472 | 8.2:-4672612 | MS.gene58193:CDS |
| TCATGATGCAGTTTCAGCCT+TGG | 0.409553 | 8.2:-4672865 | MS.gene58193:CDS |
| TAGCAAGCCTTTCAGCCAAT+TGG | 0.412297 | 8.2:+4672514 | None:intergenic |
| AGTTCCTTTGATGCAAAACT+TGG | 0.416902 | 8.2:-4671688 | MS.gene58193:CDS |
| GACGAAGCGAGGATGACAAT+TGG | 0.417283 | 8.2:+4672889 | None:intergenic |
| CTTGTTCATATTGCTGAGAA+TGG | 0.419487 | 8.2:-4674593 | MS.gene58193:CDS |
| GATAAGATAGCCGGACAATT+GGG | 0.429213 | 8.2:-4671520 | None:intergenic |
| AGGGATGTGTTATCATCTAT+GGG | 0.430675 | 8.2:-4672426 | MS.gene58193:CDS |
| TGTTAACACTGTAAAGAAAC+TGG | 0.431131 | 8.2:-4672931 | MS.gene58193:CDS |
| GCTCCCATTGACCAAACTTC+CGG | 0.436130 | 8.2:+4674622 | None:intergenic |
| GACCAAACTTCCGGTGATGC+TGG | 0.438230 | 8.2:+4674631 | None:intergenic |
| GGTAGCTTTAAAAGTGCATC+TGG | 0.443130 | 8.2:-4672267 | MS.gene58193:CDS |
| TTCCTCTTCTTGCTGGCAGC+GGG | 0.443538 | 8.2:-4671807 | MS.gene58193:CDS |
| CTCAAACTGCTTGTGGGAGC+TGG | 0.443580 | 8.2:+4673878 | None:intergenic |
| CGAATTATTAACCAAAACTA+CGG | 0.444645 | 8.2:-4674083 | MS.gene58193:CDS |
| CTGAAAGGCTTGCTACAAAA+CGG | 0.449076 | 8.2:-4672506 | MS.gene58193:CDS |
| CGTGCTGGTAAATCTTTAGA+TGG | 0.451093 | 8.2:-4671652 | MS.gene58193:CDS |
| TTTCCTCTTCTTGCTGGCAG+CGG | 0.455124 | 8.2:-4671808 | MS.gene58193:CDS |
| ACCATCGCCTCTTTAAATAC+AGG | 0.458251 | 8.2:+4672660 | None:intergenic |
| GAATGGACATTCCTTTGAGT+TGG | 0.459139 | 8.2:-4674576 | MS.gene58193:CDS |
| TCAGATAGAGTACGAGTCAT+TGG | 0.461013 | 8.2:-4672049 | MS.gene58193:CDS |
| AACATAGCTCCATTTGATGA+TGG | 0.462181 | 8.2:-4672372 | MS.gene58193:CDS |
| TCACCGGAAGTTTGGTCAAT+GGG | 0.463514 | 8.2:-4674625 | MS.gene58193:CDS |
| TCGAAGACTTGTTGACCATT+GGG | 0.464211 | 8.2:-4673806 | MS.gene58193:CDS |
| TTTATTCTCAAACTGCTTGT+GGG | 0.468390 | 8.2:+4673872 | None:intergenic |
| GGCTTCTATGAAGCTGTACA+TGG | 0.468655 | 8.2:-4672547 | MS.gene58193:CDS |
| ATTTAGGCACCATTATCATC+GGG | 0.471868 | 8.2:-4674225 | MS.gene58193:CDS |
| AACACTTCTTTCTCATCAGA+TGG | 0.471916 | 8.2:+4674416 | None:intergenic |
| ATGTTGACATCACATTGGTT+AGG | 0.473870 | 8.2:+4672390 | None:intergenic |
| CGAGTCATTGGACGATGAAA+AGG | 0.478778 | 8.2:-4672037 | MS.gene58193:CDS |
| AAATTCTTGGTGGCCAAGAA+AGG | 0.480711 | 8.2:+4673783 | None:intergenic |
| TGCATGGTTCGTGCATTCCC+AGG | 0.481834 | 8.2:-4672446 | MS.gene58193:CDS |
| ACGAAGCGAGGATGACAATT+GGG | 0.485806 | 8.2:+4672890 | None:intergenic |
| TGGCTGGCCAATTGGCTGAA+AGG | 0.488333 | 8.2:-4672521 | MS.gene58193:CDS |
| TGAAAGGCTTGCTACAAAAC+GGG | 0.490025 | 8.2:-4672505 | MS.gene58193:CDS |
| TTAAGCAAACCATCATCAAA+TGG | 0.490324 | 8.2:+4672363 | None:intergenic |
| TGCTTGCTCCAAATTCTTGG+TGG | 0.491412 | 8.2:+4673773 | None:intergenic |
| ACAGTTCCCTGTATTTAAAG+AGG | 0.493578 | 8.2:-4672667 | MS.gene58193:CDS |
| TAAAGAGGCGATGGTTCGAC+AGG | 0.495343 | 8.2:-4672652 | MS.gene58193:CDS |
| ACATCAACTTGCTCCGGTGG+TGG | 0.495585 | 8.2:+4674353 | None:intergenic |
| ATATTCATCTTTCAAATGCA+AGG | 0.495722 | 8.2:+4671972 | None:intergenic |
| AAGCTGTACATGGGCATGGC+TGG | 0.499581 | 8.2:-4672537 | MS.gene58193:CDS |
| GCATCTCGATTCATCTATGA+TGG | 0.500628 | 8.2:-4671587 | MS.gene58193:CDS |
| CTATTTCTGCAAGGCAAGCT+CGG | 0.502644 | 8.2:+4672580 | None:intergenic |
| GAATTATTAACCAAAACTAC+GGG | 0.505581 | 8.2:-4674082 | MS.gene58193:CDS |
| TAGTGACAAACCCAATTGTC+CGG | 0.508868 | 8.2:+4671510 | None:intergenic |
| TATGCTCCTGAGTATATAGC+AGG | 0.508966 | 8.2:-4672315 | MS.gene58193:CDS |
| CTAAATTGTCTCTCATAAGA+AGG | 0.509287 | 8.2:+4674242 | None:intergenic |
| TCAGGAACATCAACTTGCTC+CGG | 0.511858 | 8.2:+4674347 | None:intergenic |
| GAAGGTAAAGCCTTTAAAGC+AGG | 0.514046 | 8.2:+4674260 | None:intergenic |
| AATACATGAAACTTCATCCA+TGG | 0.514079 | 8.2:+4671714 | None:intergenic |
| ATTGTCTGATCAGTATGTGC+AGG | 0.515618 | 8.2:-4671866 | MS.gene58193:CDS |
| TCAACTTGCTCCGGTGGTGG+AGG | 0.518682 | 8.2:+4674356 | None:intergenic |
| TTGTCGTGAACATCATACAT+AGG | 0.526659 | 8.2:+4672840 | None:intergenic |
| CCCTGTATTTAAAGAGGCGA+TGG | 0.528264 | 8.2:-4672661 | MS.gene58193:CDS |
| ATCACCGGAAGTTTGGTCAA+TGG | 0.532258 | 8.2:-4674626 | MS.gene58193:CDS |
| AATTTAGGCACCATTATCAT+CGG | 0.533074 | 8.2:-4674226 | MS.gene58193:CDS |
| AAATCACTTGCCTAAAATGC+AGG | 0.533426 | 8.2:-4672817 | MS.gene58193:CDS |
| AGCAGGGGCTACTTACAGGC+TGG | 0.534042 | 8.2:-4672298 | MS.gene58193:CDS |
| GAGGCGATGGTTCGACAGGA+TGG | 0.534869 | 8.2:-4672648 | MS.gene58193:CDS |
| CATCTGCTTCATCTTGAGCA+TGG | 0.540125 | 8.2:+4671933 | None:intergenic |
| GCCAGCAAGAAGAGGAAAGT+CGG | 0.542848 | 8.2:+4671813 | None:intergenic |
| CATAGATGATAACACATCCC+TGG | 0.542849 | 8.2:+4672428 | None:intergenic |
| TGATAGCTCTCACTTGGCTG+AGG | 0.543026 | 8.2:-4672235 | MS.gene58193:CDS |
| AAGATGAGTTCCAGCATCAC+CGG | 0.544836 | 8.2:-4674641 | MS.gene58193:CDS |
| TGAAACTTCATCCATGGGCT+CGG | 0.545247 | 8.2:+4671720 | None:intergenic |
| GGAGCTTGAGGTCTCGAGAC+GGG | 0.545556 | 8.2:-4672484 | MS.gene58193:CDS |
| ATGCTTACTGGATTTGGTGA+AGG | 0.547240 | 8.2:-4673934 | MS.gene58193:CDS |
| CAGCAATATGAACAAGGAGC+TGG | 0.547565 | 8.2:+4674600 | None:intergenic |
| AAAGCATCATCAAGAGGGTG+TGG | 0.548289 | 8.2:+4674287 | None:intergenic |
| GATATCTACTACCGAGCCCA+TGG | 0.550726 | 8.2:-4671731 | MS.gene58193:CDS |
| GTAGTTTCTGATCTTTGATG+AGG | 0.551795 | 8.2:+4672688 | None:intergenic |
| GTCATTGGACGATGAAAAGG+TGG | 0.551830 | 8.2:-4672034 | MS.gene58193:CDS |
| TTCTTCTCACTATTTCTGCA+AGG | 0.553558 | 8.2:+4672571 | None:intergenic |
| TTCCCGCTGCCAGCAAGAAG+AGG | 0.554559 | 8.2:+4671805 | None:intergenic |
| CTCATCACATTCCAACTCAA+AGG | 0.554875 | 8.2:+4674565 | None:intergenic |
| CTACCAACACGCTGTCATCA+AGG | 0.555366 | 8.2:+4672163 | None:intergenic |
| CTGATCATTAAAATTGATCC+CGG | 0.561367 | 8.2:+4674499 | None:intergenic |
| TCATGAGAGGACGAAGGCGA+TGG | 0.564511 | 8.2:+4674311 | None:intergenic |
| CTTTGCATTTCTTCACGGTG+AGG | 0.567148 | 8.2:+4671562 | None:intergenic |
| AGCGTGTTGGTAGAAATTGC+TGG | 0.575401 | 8.2:-4672153 | MS.gene58193:CDS |
| TATGAAGCTGTACATGGGCA+TGG | 0.576835 | 8.2:-4672541 | MS.gene58193:CDS |
| TCATAGATGAATCGAGATGC+GGG | 0.577120 | 8.2:+4671590 | None:intergenic |
| GATTAGTGATAGCTCTCACT+TGG | 0.578335 | 8.2:-4672241 | MS.gene58193:CDS |
| ATAGATGATAACACATCCCT+GGG | 0.580269 | 8.2:+4672429 | None:intergenic |
| AATTGCTGGAACCTGCAAGA+TGG | 0.583942 | 8.2:-4672139 | MS.gene58193:CDS |
| GACGACTTTATGAGAGTGCA+TGG | 0.584175 | 8.2:-4672462 | MS.gene58193:CDS |
| CCATCGCCTCTTTAAATACA+GGG | 0.586653 | 8.2:+4672661 | None:intergenic |
| ATACATGAAACTTCATCCAT+GGG | 0.587365 | 8.2:+4671715 | None:intergenic |
| GGAACATCAACTTGCTCCGG+TGG | 0.587674 | 8.2:+4674350 | None:intergenic |
| TAATATTGACATATCTGATG+TGG | 0.594546 | 8.2:-4672343 | MS.gene58193:CDS |
| TGCAGAAATAGTGAGAAGAA+AGG | 0.594628 | 8.2:-4672568 | MS.gene58193:CDS |
| AATGACTCGTACTCTATCTG+AGG | 0.596477 | 8.2:+4672051 | None:intergenic |
| GGATCCAAAGCATCATCAAG+AGG | 0.596593 | 8.2:+4674281 | None:intergenic |
| TTGTCTGATCAGTATGTGCA+GGG | 0.596807 | 8.2:-4671865 | MS.gene58193:CDS |
| TCGACAGGATGGTTTATTTG+GGG | 0.596875 | 8.2:-4672637 | MS.gene58193:CDS |
| AAAGAGCAGTGGAAGTTGCA+AGG | 0.597137 | 8.2:-4674127 | MS.gene58193:CDS |
| TAATGCGTCTCCTCCACCAC+CGG | 0.597925 | 8.2:-4674366 | MS.gene58193:CDS |
| GCATGGTTCGTGCATTCCCA+GGG | 0.598220 | 8.2:-4672445 | MS.gene58193:CDS |
| TGAGAGGACGAAGGCGATGG+AGG | 0.598344 | 8.2:+4674314 | None:intergenic |
| GATTCACAGTTTGCAAAGCA+GGG | 0.598620 | 8.2:+4673961 | None:intergenic |
| TGCTACAAAACGGGAGCTTG+AGG | 0.599020 | 8.2:-4672496 | MS.gene58193:CDS |
| ATTTGAGAAATATGATTCTG+AGG | 0.610376 | 8.2:-4672190 | MS.gene58193:CDS |
| GGCTTCCGCTGTCTTATCTG+TGG | 0.612973 | 8.2:+4671993 | None:intergenic |
| CATTCTCAGCAATATGAACA+AGG | 0.613046 | 8.2:+4674594 | None:intergenic |
| TGGTGTGGATGAAAACATGT+TGG | 0.614005 | 8.2:-4671632 | MS.gene58193:CDS |
| TGGTAAATCTTTAGATGGTG+TGG | 0.616470 | 8.2:-4671647 | MS.gene58193:CDS |
| ATCATAGATGAATCGAGATG+CGG | 0.616680 | 8.2:+4671589 | None:intergenic |
| GATGGTTCAAGAAAGAGCAG+TGG | 0.617856 | 8.2:-4674138 | MS.gene58193:CDS |
| GTAGCCCCTGCTATATACTC+AGG | 0.617944 | 8.2:+4672309 | None:intergenic |
| GTCGGCAGCATCATTTACAC+TGG | 0.619076 | 8.2:+4671831 | None:intergenic |
| GCAAGGCAAGCTCGGTACGA+AGG | 0.620616 | 8.2:+4672588 | None:intergenic |
| GGAAGAAAACTTGAGAAAGT+CGG | 0.623939 | 8.2:-4673913 | MS.gene58193:CDS |
| TGAAATATGAGCATTGTGAG+AGG | 0.624640 | 8.2:-4674175 | MS.gene58193:CDS |
| GGTTTGTTCACAGAACGTGC+TGG | 0.624988 | 8.2:-4671667 | MS.gene58193:CDS |
| TGCATCATGAGGACGAAGCG+AGG | 0.625522 | 8.2:+4672878 | None:intergenic |
| ATGCTCCTGAGTATATAGCA+GGG | 0.626599 | 8.2:-4672314 | MS.gene58193:CDS |
| GGTGGCCAAGAAAGGCCCAA+TGG | 0.627470 | 8.2:+4673791 | None:intergenic |
| TTTGATGAGGTAAGAAACGT+AGG | 0.627951 | 8.2:+4672701 | None:intergenic |
| TATGCAGACAACGGCCTCTG+TGG | 0.634624 | 8.2:+4674446 | None:intergenic |
| GAGCTATGTTGACATCACAT+TGG | 0.637009 | 8.2:+4672385 | None:intergenic |
| CGCTCGTTGAGGCTGTTATG+CGG | 0.637690 | 8.2:-4674538 | MS.gene58193:CDS |
| ACTTACAGGCTGGAGAAGCA+TGG | 0.638144 | 8.2:-4672288 | MS.gene58193:CDS |
| AAGAGGGTGTGGATCATGAG+AGG | 0.641519 | 8.2:+4674298 | None:intergenic |
| CATTGGACGATGAAAAGGTG+GGG | 0.641616 | 8.2:-4672032 | MS.gene58193:CDS |
| TTAGGCACCATTATCATCGG+GGG | 0.642356 | 8.2:-4674223 | MS.gene58193:CDS |
| GCTTCTATGAAGCTGTACAT+GGG | 0.643553 | 8.2:-4672546 | MS.gene58193:CDS |
| AGAAAACTTGAGAAAGTCGG+TGG | 0.648776 | 8.2:-4673910 | MS.gene58193:CDS |
| AACATCATACATAGGACCCA+AGG | 0.649305 | 8.2:+4672848 | None:intergenic |
| TGCTCCTGAGTATATAGCAG+GGG | 0.649869 | 8.2:-4672313 | MS.gene58193:CDS |
| GATCCAAAGCATCATCAAGA+GGG | 0.653481 | 8.2:+4674282 | None:intergenic |
| CCTCCTTGATGACAGCGTGT+TGG | 0.657169 | 8.2:-4672166 | MS.gene58193:CDS |
| GGGAGCTTGAGGTCTCGAGA+CGG | 0.658376 | 8.2:-4672485 | MS.gene58193:CDS |
| TCATTGGACGATGAAAAGGT+GGG | 0.659091 | 8.2:-4672033 | MS.gene58193:CDS |
| GGTCTATTGAATCTGTTACC+GGG | 0.660316 | 8.2:-4674517 | MS.gene58193:CDS |
| ATTTGAAACTTGAGCCACAG+AGG | 0.663989 | 8.2:-4674460 | MS.gene58193:CDS |
| AAGGCTGAAACTGCATCATG+AGG | 0.665786 | 8.2:+4672867 | None:intergenic |
| ATGACTCGTACTCTATCTGA+GGG | 0.666498 | 8.2:+4672052 | None:intergenic |
| GGGATGTGTTATCATCTATG+GGG | 0.670755 | 8.2:-4672425 | MS.gene58193:CDS |
| GGCTCGGTAGTAGATATCGA+AGG | 0.674806 | 8.2:+4671736 | None:intergenic |
| TGCTGGAACCTGCAAGATGG+AGG | 0.675263 | 8.2:-4672136 | MS.gene58193:CDS |
| TGCAAGTCAGAATACGTGAG+TGG | 0.679170 | 8.2:-4671772 | MS.gene58193:CDS |
| TTTAGGCACCATTATCATCG+GGG | 0.683485 | 8.2:-4674224 | MS.gene58193:CDS |
| AAAGTATCATGCAATCTCTG+AGG | 0.685982 | 8.2:-4673716 | MS.gene58193:intron |
| GGAAGCTTGTATGCAGACAA+CGG | 0.686654 | 8.2:+4674437 | None:intergenic |
| GGTACGAAGGACCAATACTG+TGG | 0.689452 | 8.2:+4672601 | None:intergenic |
| TGATGAGAATGCGCTCGTTG+AGG | 0.695717 | 8.2:-4674549 | MS.gene58193:CDS |
| TGTGGATCATGAGAGGACGA+AGG | 0.710466 | 8.2:+4674305 | None:intergenic |
| TAACACTGTAAAGAAACTGG+TGG | 0.718279 | 8.2:-4672928 | MS.gene58193:CDS |
| TGTCTGATCAGTATGTGCAG+GGG | 0.719823 | 8.2:-4671864 | MS.gene58193:CDS |
| AATTATTAACCAAAACTACG+GGG | 0.732278 | 8.2:-4674081 | MS.gene58193:CDS |
| ACAATGCTCATATTTCATCG+AGG | 0.740021 | 8.2:+4674181 | None:intergenic |
| CCAACACGCTGTCATCAAGG+AGG | 0.752025 | 8.2:+4672166 | None:intergenic |
| GAATGCCACAGATAAGACAG+CGG | 0.758361 | 8.2:-4671998 | MS.gene58193:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAATTTAATATTCAAATTT+TGG | - | chr8.2:4672592-4672611 | MS.gene58193:CDS | 10.0% |
| !! | ACTTATAAATTACATTTCTT+TGG | - | chr8.2:4673187-4673206 | MS.gene58193:intron | 15.0% |
| !! | ATTGAATTATGTAAACAATA+TGG | + | chr8.2:4672854-4672873 | None:intergenic | 15.0% |
| !! | CTTATAAATTACATTTCTTT+GGG | - | chr8.2:4673188-4673207 | MS.gene58193:intron | 15.0% |
| !! | TTATAAATTACATTTCTTTG+GGG | - | chr8.2:4673189-4673208 | MS.gene58193:intron | 15.0% |
| !! | TTGAATTATGTAAACAATAT+GGG | + | chr8.2:4672853-4672872 | None:intergenic | 15.0% |
| !!! | TTATTCTTCTTTTTGTTTTT+TGG | - | chr8.2:4673132-4673151 | MS.gene58193:intron | 15.0% |
| !! | ATTTCATTTGAATTTGATTC+TGG | - | chr8.2:4673041-4673060 | MS.gene58193:intron | 20.0% |
| !!! | AATATTCAAATTTTGGTTTG+TGG | - | chr8.2:4672599-4672618 | MS.gene58193:CDS | 20.0% |
| !!! | ACTTTCATTTTCTAGTTTTT+AGG | - | chr8.2:4672747-4672766 | MS.gene58193:CDS | 20.0% |
| ! | AATTATTAACCAAAACTACG+GGG | - | chr8.2:4672078-4672097 | MS.gene58193:CDS | 25.0% |
| ! | AGAAATGGTTCAAAATTTGT+AGG | + | chr8.2:4672677-4672696 | None:intergenic | 25.0% |
| ! | AGCTTATATATTGTGTTAGT+GGG | - | chr8.2:4672644-4672663 | MS.gene58193:CDS | 25.0% |
| ! | ATATTCATCTTTCAAATGCA+AGG | + | chr8.2:4674190-4674209 | None:intergenic | 25.0% |
| ! | ATTTGAGAAATATGATTCTG+AGG | - | chr8.2:4673969-4673988 | MS.gene58193:CDS | 25.0% |
| ! | CGAATTATTAACCAAAACTA+CGG | - | chr8.2:4672076-4672095 | MS.gene58193:CDS | 25.0% |
| ! | GAAATGGTTCAAAATTTGTA+GGG | + | chr8.2:4672676-4672695 | None:intergenic | 25.0% |
| ! | GAATTATTAACCAAAACTAC+GGG | - | chr8.2:4672077-4672096 | MS.gene58193:CDS | 25.0% |
| ! | GATAAAAAAGATAAGATAGC+CGG | - | chr8.2:4674630-4674649 | MS.gene58193:CDS | 25.0% |
| ! | GTCACTATATCAAATGTTAT+CGG | - | chr8.2:4673160-4673179 | MS.gene58193:intron | 25.0% |
| ! | TAAAAGCTTCATATTTGTCA+TGG | + | chr8.2:4672719-4672738 | None:intergenic | 25.0% |
| ! | TAATATTGACATATCTGATG+TGG | - | chr8.2:4673816-4673835 | MS.gene58193:CDS | 25.0% |
| ! | TAGCTTATATATTGTGTTAG+TGG | - | chr8.2:4672643-4672662 | MS.gene58193:CDS | 25.0% |
| ! | TTAAAATTGTTCCACAGTAT+TGG | - | chr8.2:4673547-4673566 | MS.gene58193:intron | 25.0% |
| !! | ATATGAATGTCATTTGATTC+CGG | - | chr8.2:4672805-4672824 | MS.gene58193:CDS | 25.0% |
| !! | ATTTCTGCTAAGTTTTTGAT+CGG | - | chr8.2:4672691-4672710 | MS.gene58193:CDS | 25.0% |
| AAGTAACGAAGTTACAAAAC+CGG | + | chr8.2:4672566-4672585 | None:intergenic | 30.0% | |
| AATACATGAAACTTCATCCA+TGG | + | chr8.2:4674448-4674467 | None:intergenic | 30.0% | |
| AATTTAGGCACCATTATCAT+CGG | - | chr8.2:4671933-4671952 | MS.gene58193:CDS | 30.0% | |
| ATACATGAAACTTCATCCAT+GGG | + | chr8.2:4674447-4674466 | None:intergenic | 30.0% | |
| ATTATGTGCTCTTTAATGCT+TGG | - | chr8.2:4672492-4672511 | MS.gene58193:CDS | 30.0% | |
| CTAAATTGTCTCTCATAAGA+AGG | + | chr8.2:4671920-4671939 | None:intergenic | 30.0% | |
| CTGATCATTAAAATTGATCC+CGG | + | chr8.2:4671663-4671682 | None:intergenic | 30.0% | |
| CTTCTTATGAGAGACAATTT+AGG | - | chr8.2:4671918-4671937 | MS.gene58193:CDS | 30.0% | |
| GATCAAAAACTTAGCAGAAA+TGG | + | chr8.2:4672692-4672711 | None:intergenic | 30.0% | |
| GATCAAAAACTTTGCAGAAA+TGG | + | chr8.2:4672915-4672934 | None:intergenic | 30.0% | |
| TAAAAGCTTCGTATTCGTAA+TGG | + | chr8.2:4672942-4672961 | None:intergenic | 30.0% | |
| TGTTAACACTGTAAAGAAAC+TGG | - | chr8.2:4673228-4673247 | MS.gene58193:intron | 30.0% | |
| TTAAGCAAACCATCATCAAA+TGG | + | chr8.2:4673799-4673818 | None:intergenic | 30.0% | |
| TTTATTCTCAAACTGCTTGT+GGG | + | chr8.2:4672290-4672309 | None:intergenic | 30.0% | |
| ! | ACAATTTAAGCAGAGTTTTG+GGG | - | chr8.2:4672315-4672334 | MS.gene58193:CDS | 30.0% |
| ! | CACAATTTAAGCAGAGTTTT+GGG | - | chr8.2:4672314-4672333 | MS.gene58193:CDS | 30.0% |
| ! | TCACAATTTAAGCAGAGTTT+TGG | - | chr8.2:4672313-4672332 | MS.gene58193:CDS | 30.0% |
| ! | TCTGATCTTCTGGTAAATTT+TGG | - | chr8.2:4672139-4672158 | MS.gene58193:CDS | 30.0% |
| ! | TGTTCATTTTCAATAAAGCC+AGG | - | chr8.2:4671762-4671781 | MS.gene58193:CDS | 30.0% |
| ! | TTTTATTCTCAAACTGCTTG+TGG | + | chr8.2:4672291-4672310 | None:intergenic | 30.0% |
| !! | TCTTCTGGTAAATTTTGGAA+AGG | - | chr8.2:4672144-4672163 | MS.gene58193:CDS | 30.0% |
| !!! | ACTTTCACCTTCTAGTTTTT+AGG | - | chr8.2:4672970-4672989 | MS.gene58193:intron | 30.0% |
| AAATCACTTGCCTAAAATGC+AGG | - | chr8.2:4673342-4673361 | MS.gene58193:intron | 35.0% | |
| AACACTTCTTTCTCATCAGA+TGG | + | chr8.2:4671746-4671765 | None:intergenic | 35.0% | |
| AACATAGCTCCATTTGATGA+TGG | - | chr8.2:4673787-4673806 | MS.gene58193:CDS | 35.0% | |
| AATTGCTTGCTCCAAATTCT+TGG | + | chr8.2:4672392-4672411 | None:intergenic | 35.0% | |
| ACAATGCTCATATTTCATCG+AGG | + | chr8.2:4671981-4672000 | None:intergenic | 35.0% | |
| ACAGTTCCCTGTATTTAAAG+AGG | - | chr8.2:4673492-4673511 | MS.gene58193:intron | 35.0% | |
| ACTCAGTCCTAAAAACTAGA+AGG | + | chr8.2:4672980-4672999 | None:intergenic | 35.0% | |
| AGATTACAGAAAGTGACATC+CGG | + | chr8.2:4672827-4672846 | None:intergenic | 35.0% | |
| AGGGATGTGTTATCATCTAT+GGG | - | chr8.2:4673733-4673752 | MS.gene58193:CDS | 35.0% | |
| AGTTCCTTTGATGCAAAACT+TGG | - | chr8.2:4674471-4674490 | MS.gene58193:CDS | 35.0% | |
| ATAGATGATAACACATCCCT+GGG | + | chr8.2:4673733-4673752 | None:intergenic | 35.0% | |
| ATCATAGATGAATCGAGATG+CGG | + | chr8.2:4674573-4674592 | None:intergenic | 35.0% | |
| ATTTAGGCACCATTATCATC+GGG | - | chr8.2:4671934-4671953 | MS.gene58193:CDS | 35.0% | |
| CATTCTCAGCAATATGAACA+AGG | + | chr8.2:4671568-4671587 | None:intergenic | 35.0% | |
| CGAGAAACGTATTCAAGAAT+TGG | - | chr8.2:4674263-4674282 | MS.gene58193:CDS | 35.0% | |
| CTTGTTCATATTGCTGAGAA+TGG | - | chr8.2:4671566-4671585 | MS.gene58193:CDS | 35.0% | |
| GAAAACATGTTGGATTCATC+TGG | - | chr8.2:4674537-4674556 | MS.gene58193:CDS | 35.0% | |
| GGAAGAAAACTTGAGAAAGT+CGG | - | chr8.2:4672246-4672265 | MS.gene58193:CDS | 35.0% | |
| GGTTCAAAATTTGTAGGGAT+AGG | + | chr8.2:4672671-4672690 | None:intergenic | 35.0% | |
| GTAGTTTCTGATCTTTGATG+AGG | + | chr8.2:4673474-4673493 | None:intergenic | 35.0% | |
| TAACACTGTAAAGAAACTGG+TGG | - | chr8.2:4673231-4673250 | MS.gene58193:intron | 35.0% | |
| TCGTAAATGCTTACTGGATT+TGG | - | chr8.2:4672219-4672238 | MS.gene58193:CDS | 35.0% | |
| TGCAGAAATAGTGAGAAGAA+AGG | - | chr8.2:4673591-4673610 | MS.gene58193:intron | 35.0% | |
| TGGTAAATCTTTAGATGGTG+TGG | - | chr8.2:4674512-4674531 | MS.gene58193:CDS | 35.0% | |
| TGTGAATCGTAAATGCTTAC+TGG | - | chr8.2:4672213-4672232 | MS.gene58193:CDS | 35.0% | |
| TTCGACAGGATGGTTTATTT+GGG | - | chr8.2:4673521-4673540 | MS.gene58193:intron | 35.0% | |
| TTGTCGTGAACATCATACAT+AGG | + | chr8.2:4673322-4673341 | None:intergenic | 35.0% | |
| TTTGATGAGGTAAGAAACGT+AGG | + | chr8.2:4673461-4673480 | None:intergenic | 35.0% | |
| ! | AAAGTATCATGCAATCTCTG+AGG | - | chr8.2:4672443-4672462 | MS.gene58193:CDS | 35.0% |
| ! | ATGTTGACATCACATTGGTT+AGG | + | chr8.2:4673772-4673791 | None:intergenic | 35.0% |
| ! | CAAACCAAGTTTTGCATCAA+AGG | + | chr8.2:4674478-4674497 | None:intergenic | 35.0% |
| ! | TGAAATATGAGCATTGTGAG+AGG | - | chr8.2:4671984-4672003 | MS.gene58193:CDS | 35.0% |
| ! | TGATCAGCTTGTTCTTTGTT+CGG | - | chr8.2:4671676-4671695 | MS.gene58193:CDS | 35.0% |
| !! | TTCTTCTCACTATTTCTGCA+AGG | + | chr8.2:4673591-4673610 | None:intergenic | 35.0% |
| !! | TTTGGTTTGTGGCTTATATG+TGG | - | chr8.2:4672610-4672629 | MS.gene58193:CDS | 35.0% |
| AACATCATACATAGGACCCA+AGG | + | chr8.2:4673314-4673333 | None:intergenic | 40.0% | |
| AATGACTCGTACTCTATCTG+AGG | + | chr8.2:4674111-4674130 | None:intergenic | 40.0% | |
| ACCATCGCCTCTTTAAATAC+AGG | + | chr8.2:4673502-4673521 | None:intergenic | 40.0% | |
| AGAAAACTTGAGAAAGTCGG+TGG | - | chr8.2:4672249-4672268 | MS.gene58193:CDS | 40.0% | |
| AGATAAGATAGCCGGACAAT+TGG | - | chr8.2:4674638-4674657 | MS.gene58193:CDS | 40.0% | |
| ATGACTCGTACTCTATCTGA+GGG | + | chr8.2:4674110-4674129 | None:intergenic | 40.0% | |
| ATGCTCCTGAGTATATAGCA+GGG | - | chr8.2:4673845-4673864 | MS.gene58193:CDS | 40.0% | |
| ATTGTCTGATCAGTATGTGC+AGG | - | chr8.2:4674293-4674312 | MS.gene58193:CDS | 40.0% | |
| CACTGCTTTGCATTTCTTCA+CGG | + | chr8.2:4674605-4674624 | None:intergenic | 40.0% | |
| CAGGGATGTGTTATCATCTA+TGG | - | chr8.2:4673732-4673751 | MS.gene58193:CDS | 40.0% | |
| CATAGATGATAACACATCCC+TGG | + | chr8.2:4673734-4673753 | None:intergenic | 40.0% | |
| CCATCGCCTCTTTAAATACA+GGG | + | chr8.2:4673501-4673520 | None:intergenic | 40.0% | |
| CGGTCTATTGAATCTGTTAC+CGG | - | chr8.2:4671641-4671660 | MS.gene58193:CDS | 40.0% | |
| CTCATCACATTCCAACTCAA+AGG | + | chr8.2:4671597-4671616 | None:intergenic | 40.0% | |
| GAATGGACATTCCTTTGAGT+TGG | - | chr8.2:4671583-4671602 | MS.gene58193:CDS | 40.0% | |
| GAGCTATGTTGACATCACAT+TGG | + | chr8.2:4673777-4673796 | None:intergenic | 40.0% | |
| GATTAGTGATAGCTCTCACT+TGG | - | chr8.2:4673918-4673937 | MS.gene58193:CDS | 40.0% | |
| GATTCACAGTTTGCAAAGCA+GGG | + | chr8.2:4672201-4672220 | None:intergenic | 40.0% | |
| GCATCTCGATTCATCTATGA+TGG | - | chr8.2:4674572-4674591 | MS.gene58193:CDS | 40.0% | |
| GCTTCTATGAAGCTGTACAT+GGG | - | chr8.2:4673613-4673632 | MS.gene58193:intron | 40.0% | |
| GGAAGTTGCAAGGTGTAATT+TGG | - | chr8.2:4672042-4672061 | MS.gene58193:CDS | 40.0% | |
| GGGATGTGTTATCATCTATG+GGG | - | chr8.2:4673734-4673753 | MS.gene58193:CDS | 40.0% | |
| GGTCTATTGAATCTGTTACC+GGG | - | chr8.2:4671642-4671661 | MS.gene58193:CDS | 40.0% | |
| GTGCTCTTTAATGCTTGGTT+AGG | - | chr8.2:4672497-4672516 | MS.gene58193:CDS | 40.0% | |
| GTTCGACAGGATGGTTTATT+TGG | - | chr8.2:4673520-4673539 | MS.gene58193:intron | 40.0% | |
| TATGCTCCTGAGTATATAGC+AGG | - | chr8.2:4673844-4673863 | MS.gene58193:CDS | 40.0% | |
| TCAGATAGAGTACGAGTCAT+TGG | - | chr8.2:4674110-4674129 | MS.gene58193:CDS | 40.0% | |
| TCATAGATGAATCGAGATGC+GGG | + | chr8.2:4674572-4674591 | None:intergenic | 40.0% | |
| TCATTGGACGATGAAAAGGT+GGG | - | chr8.2:4674126-4674145 | MS.gene58193:CDS | 40.0% | |
| TCGACAGGATGGTTTATTTG+GGG | - | chr8.2:4673522-4673541 | MS.gene58193:intron | 40.0% | |
| TGGTGTGGATGAAAACATGT+TGG | - | chr8.2:4674527-4674546 | MS.gene58193:CDS | 40.0% | |
| TTGTCTGATCAGTATGTGCA+GGG | - | chr8.2:4674294-4674313 | MS.gene58193:CDS | 40.0% | |
| TTTAGGCACCATTATCATCG+GGG | - | chr8.2:4671935-4671954 | MS.gene58193:CDS | 40.0% | |
| TTTCTTGGCCACCAAGAATT+TGG | - | chr8.2:4672378-4672397 | MS.gene58193:CDS | 40.0% | |
| ! | AAATTCTTGGTGGCCAAGAA+AGG | + | chr8.2:4672379-4672398 | None:intergenic | 40.0% |
| ! | ATTTGAAACTTGAGCCACAG+AGG | - | chr8.2:4671699-4671718 | MS.gene58193:CDS | 40.0% |
| ! | CGTGCTGGTAAATCTTTAGA+TGG | - | chr8.2:4674507-4674526 | MS.gene58193:CDS | 40.0% |
| ! | GATCCAAAGCATCATCAAGA+GGG | + | chr8.2:4671880-4671899 | None:intergenic | 40.0% |
| ! | GCTTCGTATTCGTAATGGAA+TGG | + | chr8.2:4672937-4672956 | None:intergenic | 40.0% |
| ! | TCATGAAATCCCCGTAGTTT+TGG | + | chr8.2:4672090-4672109 | None:intergenic | 40.0% |
| ! | TGCTTTGGATCCTGCTTTAA+AGG | - | chr8.2:4671889-4671908 | MS.gene58193:CDS | 40.0% |
| !! | ATGCTTACTGGATTTGGTGA+AGG | - | chr8.2:4672225-4672244 | MS.gene58193:CDS | 40.0% |
| !! | CTGAAAGGCTTGCTACAAAA+CGG | - | chr8.2:4673653-4673672 | MS.gene58193:intron | 40.0% |
| !! | GAAGGTAAAGCCTTTAAAGC+AGG | + | chr8.2:4671902-4671921 | None:intergenic | 40.0% |
| !! | GGTAGCTTTAAAAGTGCATC+TGG | - | chr8.2:4673892-4673911 | MS.gene58193:CDS | 40.0% |
| !! | TCGAAGACTTGTTGACCATT+GGG | - | chr8.2:4672353-4672372 | MS.gene58193:CDS | 40.0% |
| !! | TGAAAGGCTTGCTACAAAAC+GGG | - | chr8.2:4673654-4673673 | MS.gene58193:intron | 40.0% |
| !!! | AGACGCATTATTTTGAAGCC+TGG | + | chr8.2:4671783-4671802 | None:intergenic | 40.0% |
| !!! | GATGGAGGCTCTAAATTTTC+AGG | + | chr8.2:4671833-4671852 | None:intergenic | 40.0% |
| AAAGAGCAGTGGAAGTTGCA+AGG | - | chr8.2:4672032-4672051 | MS.gene58193:CDS | 45.0% | |
| AAGGCTGAAACTGCATCATG+AGG | + | chr8.2:4673295-4673314 | None:intergenic | 45.0% | |
| AATTGCTGGAACCTGCAAGA+TGG | - | chr8.2:4674020-4674039 | MS.gene58193:CDS | 45.0% | |
| ACGAAGCGAGGATGACAATT+GGG | + | chr8.2:4673272-4673291 | None:intergenic | 45.0% | |
| ATATAGCAGGGGCTACTTAC+AGG | - | chr8.2:4673857-4673876 | MS.gene58193:CDS | 45.0% | |
| ATCACCGGAAGTTTGGTCAA+TGG | - | chr8.2:4671533-4671552 | MS.gene58193:CDS | 45.0% | |
| ATTCTCAACCTCCATCTTGC+AGG | + | chr8.2:4674034-4674053 | None:intergenic | 45.0% | |
| CAAAACCGGATAACACGTCA+AGG | + | chr8.2:4672552-4672571 | None:intergenic | 45.0% | |
| CAAAGCAGGGTGAAGTTTGA+TGG | + | chr8.2:4672188-4672207 | None:intergenic | 45.0% | |
| CAGAATGCACTCTGATCTTC+TGG | - | chr8.2:4672129-4672148 | MS.gene58193:CDS | 45.0% | |
| CAGCAATATGAACAAGGAGC+TGG | + | chr8.2:4671562-4671581 | None:intergenic | 45.0% | |
| CATCTGCTTCATCTTGAGCA+TGG | + | chr8.2:4674229-4674248 | None:intergenic | 45.0% | |
| CATGATGCAGTTTCAGCCTT+GGG | - | chr8.2:4673295-4673314 | MS.gene58193:intron | 45.0% | |
| CATTGGACGATGAAAAGGTG+GGG | - | chr8.2:4674127-4674146 | MS.gene58193:CDS | 45.0% | |
| CCCTGTATTTAAAGAGGCGA+TGG | - | chr8.2:4673498-4673517 | MS.gene58193:intron | 45.0% | |
| CGAGTCATTGGACGATGAAA+AGG | - | chr8.2:4674122-4674141 | MS.gene58193:CDS | 45.0% | |
| CGATTCACAGTTTGCAAAGC+AGG | + | chr8.2:4672202-4672221 | None:intergenic | 45.0% | |
| CTTGACCTTGACGTGTTATC+CGG | - | chr8.2:4672544-4672563 | MS.gene58193:CDS | 45.0% | |
| CTTTGCATTTCTTCACGGTG+AGG | + | chr8.2:4674600-4674619 | None:intergenic | 45.0% | |
| GAATGCCACAGATAAGACAG+CGG | - | chr8.2:4674161-4674180 | MS.gene58193:CDS | 45.0% | |
| GATGGTTCAAGAAAGAGCAG+TGG | - | chr8.2:4672021-4672040 | MS.gene58193:CDS | 45.0% | |
| GCTGAGGCTGTAGATATTTC+AGG | - | chr8.2:4673940-4673959 | MS.gene58193:CDS | 45.0% | |
| GGAAGCTTGTATGCAGACAA+CGG | + | chr8.2:4671725-4671744 | None:intergenic | 45.0% | |
| GGCTTCTATGAAGCTGTACA+TGG | - | chr8.2:4673612-4673631 | MS.gene58193:intron | 45.0% | |
| GTCATTGGACGATGAAAAGG+TGG | - | chr8.2:4674125-4674144 | MS.gene58193:CDS | 45.0% | |
| TAGCAAGCCTTTCAGCCAAT+TGG | + | chr8.2:4673648-4673667 | None:intergenic | 45.0% | |
| TATGAAGCTGTACATGGGCA+TGG | - | chr8.2:4673618-4673637 | MS.gene58193:intron | 45.0% | |
| TCACCGGAAGTTTGGTCAAT+GGG | - | chr8.2:4671534-4671553 | MS.gene58193:CDS | 45.0% | |
| TCATGATGCAGTTTCAGCCT+TGG | - | chr8.2:4673294-4673313 | MS.gene58193:intron | 45.0% | |
| TGAAACTTCATCCATGGGCT+CGG | + | chr8.2:4674442-4674461 | None:intergenic | 45.0% | |
| TGCAAGTCAGAATACGTGAG+TGG | - | chr8.2:4674387-4674406 | MS.gene58193:CDS | 45.0% | |
| TGCTCCTGAGTATATAGCAG+GGG | - | chr8.2:4673846-4673865 | MS.gene58193:CDS | 45.0% | |
| TGCTTGCTCCAAATTCTTGG+TGG | + | chr8.2:4672389-4672408 | None:intergenic | 45.0% | |
| TGTCTGATCAGTATGTGCAG+GGG | - | chr8.2:4674295-4674314 | MS.gene58193:CDS | 45.0% | |
| TTAGGCACCATTATCATCGG+GGG | - | chr8.2:4671936-4671955 | MS.gene58193:CDS | 45.0% | |
| ! | AAAGCATCATCAAGAGGGTG+TGG | + | chr8.2:4671875-4671894 | None:intergenic | 45.0% |
| ! | AGCGTGTTGGTAGAAATTGC+TGG | - | chr8.2:4674006-4674025 | MS.gene58193:CDS | 45.0% |
| ! | CGATCACAAGCCTGCATTTT+AGG | + | chr8.2:4673355-4673374 | None:intergenic | 45.0% |
| ! | GACGACTTTATGAGAGTGCA+TGG | - | chr8.2:4673697-4673716 | MS.gene58193:intron | 45.0% |
| ! | GGATCCAAAGCATCATCAAG+AGG | + | chr8.2:4671881-4671900 | None:intergenic | 45.0% |
| ! | TCAGGAACATCAACTTGCTC+CGG | + | chr8.2:4671815-4671834 | None:intergenic | 45.0% |
| !! | ACACCCTCTTGATGATGCTT+TGG | - | chr8.2:4671874-4671893 | MS.gene58193:CDS | 45.0% |
| !! | CTATTTCTGCAAGGCAAGCT+CGG | + | chr8.2:4673582-4673601 | None:intergenic | 45.0% |
| !! | GAGGCTTTTGAGAGAACAGA+TGG | - | chr8.2:4672003-4672022 | MS.gene58193:CDS | 45.0% |
| !! | GTCGAAGACTTGTTGACCAT+TGG | - | chr8.2:4672352-4672371 | MS.gene58193:CDS | 45.0% |
| ACTTACAGGCTGGAGAAGCA+TGG | - | chr8.2:4673871-4673890 | MS.gene58193:CDS | 50.0% | |
| CTACCAACACGCTGTCATCA+AGG | + | chr8.2:4673999-4674018 | None:intergenic | 50.0% | |
| GACGAAGCGAGGATGACAAT+TGG | + | chr8.2:4673273-4673292 | None:intergenic | 50.0% | |
| GATATCTACTACCGAGCCCA+TGG | - | chr8.2:4674428-4674447 | MS.gene58193:CDS | 50.0% | |
| GCCAGCAAGAAGAGGAAAGT+CGG | + | chr8.2:4674349-4674368 | None:intergenic | 50.0% | |
| GCTCCCATTGACCAAACTTC+CGG | + | chr8.2:4671540-4671559 | None:intergenic | 50.0% | |
| GGTACGAAGGACCAATACTG+TGG | + | chr8.2:4673561-4673580 | None:intergenic | 50.0% | |
| GTAGCCCCTGCTATATACTC+AGG | + | chr8.2:4673853-4673872 | None:intergenic | 50.0% | |
| GTCGGCAGCATCATTTACAC+TGG | + | chr8.2:4674331-4674350 | None:intergenic | 50.0% | |
| GTTGACCATTGGGCCTTTCT+TGG | - | chr8.2:4672363-4672382 | MS.gene58193:CDS | 50.0% | |
| TAAAGAGGCGATGGTTCGAC+AGG | - | chr8.2:4673507-4673526 | MS.gene58193:intron | 50.0% | |
| TCACATGCCCCCGATGATAA+TGG | + | chr8.2:4671946-4671965 | None:intergenic | 50.0% | |
| TGATAGCTCTCACTTGGCTG+AGG | - | chr8.2:4673924-4673943 | MS.gene58193:CDS | 50.0% | |
| TGATGAGAATGCGCTCGTTG+AGG | - | chr8.2:4671610-4671629 | MS.gene58193:CDS | 50.0% | |
| TGCTACAAAACGGGAGCTTG+AGG | - | chr8.2:4673663-4673682 | MS.gene58193:intron | 50.0% | |
| TGTGGATCATGAGAGGACGA+AGG | + | chr8.2:4671857-4671876 | None:intergenic | 50.0% | |
| TTCCAGCATCACCGGAAGTT+TGG | - | chr8.2:4671526-4671545 | MS.gene58193:CDS | 50.0% | |
| TTTCCTCTTCTTGCTGGCAG+CGG | - | chr8.2:4674351-4674370 | MS.gene58193:CDS | 50.0% | |
| ! | AAGAGGGTGTGGATCATGAG+AGG | + | chr8.2:4671864-4671883 | None:intergenic | 50.0% |
| ! | CGGGGGCATGTGATTTATAC+TGG | - | chr8.2:4671953-4671972 | MS.gene58193:CDS | 50.0% |
| ! | GGCTCGGTAGTAGATATCGA+AGG | + | chr8.2:4674426-4674445 | None:intergenic | 50.0% |
| ! | GGTTTGTTCACAGAACGTGC+TGG | - | chr8.2:4674492-4674511 | MS.gene58193:CDS | 50.0% |
| AAGCTGTACATGGGCATGGC+TGG | - | chr8.2:4673622-4673641 | MS.gene58193:intron | 55.0% | |
| CCAACACGCTGTCATCAAGG+AGG | + | chr8.2:4673996-4674015 | None:intergenic | 55.0% | |
| CGCTCGTTGAGGCTGTTATG+CGG | - | chr8.2:4671621-4671640 | MS.gene58193:CDS | 55.0% | |
| CTCAAACTGCTTGTGGGAGC+TGG | + | chr8.2:4672284-4672303 | None:intergenic | 55.0% | |
| GACCAAACTTCCGGTGATGC+TGG | + | chr8.2:4671531-4671550 | None:intergenic | 55.0% | |
| GCATGGTTCGTGCATTCCCA+GGG | - | chr8.2:4673714-4673733 | MS.gene58193:intron | 55.0% | |
| GGCTTCCGCTGTCTTATCTG+TGG | + | chr8.2:4674169-4674188 | None:intergenic | 55.0% | |
| TAATGCGTCTCCTCCACCAC+CGG | - | chr8.2:4671793-4671812 | MS.gene58193:CDS | 55.0% | |
| TATGCAGACAACGGCCTCTG+TGG | + | chr8.2:4671716-4671735 | None:intergenic | 55.0% | |
| TCATGAGAGGACGAAGGCGA+TGG | + | chr8.2:4671851-4671870 | None:intergenic | 55.0% | |
| TGCATCATGAGGACGAAGCG+AGG | + | chr8.2:4673284-4673303 | None:intergenic | 55.0% | |
| TGCATGGTTCGTGCATTCCC+AGG | - | chr8.2:4673713-4673732 | MS.gene58193:intron | 55.0% | |
| TGCTGGAACCTGCAAGATGG+AGG | - | chr8.2:4674023-4674042 | MS.gene58193:CDS | 55.0% | |
| TTCCTCTTCTTGCTGGCAGC+GGG | - | chr8.2:4674352-4674371 | MS.gene58193:CDS | 55.0% | |
| ! | ACATCAACTTGCTCCGGTGG+TGG | + | chr8.2:4671809-4671828 | None:intergenic | 55.0% |
| ! | CCTCCTTGATGACAGCGTGT+TGG | - | chr8.2:4673993-4674012 | MS.gene58193:CDS | 55.0% |
| ! | GCCGACTTTCCTCTTCTTGC+TGG | - | chr8.2:4674345-4674364 | MS.gene58193:CDS | 55.0% |
| ! | GGAACATCAACTTGCTCCGG+TGG | + | chr8.2:4671812-4671831 | None:intergenic | 55.0% |
| ! | TGGCTGGCCAATTGGCTGAA+AGG | - | chr8.2:4673638-4673657 | MS.gene58193:intron | 55.0% |
| AGCAGGGGCTACTTACAGGC+TGG | - | chr8.2:4673861-4673880 | MS.gene58193:CDS | 60.0% | |
| GAGGCGATGGTTCGACAGGA+TGG | - | chr8.2:4673511-4673530 | MS.gene58193:intron | 60.0% | |
| GCAAGGCAAGCTCGGTACGA+AGG | + | chr8.2:4673574-4673593 | None:intergenic | 60.0% | |
| GGAGCTTGAGGTCTCGAGAC+GGG | - | chr8.2:4673675-4673694 | MS.gene58193:intron | 60.0% | |
| GGGAGCTTGAGGTCTCGAGA+CGG | - | chr8.2:4673674-4673693 | MS.gene58193:intron | 60.0% | |
| GGTGGCCAAGAAAGGCCCAA+TGG | + | chr8.2:4672371-4672390 | None:intergenic | 60.0% | |
| TGAGAGGACGAAGGCGATGG+AGG | + | chr8.2:4671848-4671867 | None:intergenic | 60.0% | |
| TTCCCGCTGCCAGCAAGAAG+AGG | + | chr8.2:4674357-4674376 | None:intergenic | 60.0% | |
| ! | CATGGGCATGGCTGGCCAAT+TGG | - | chr8.2:4673630-4673649 | MS.gene58193:intron | 60.0% |
| ! | TCAACTTGCTCCGGTGGTGG+AGG | + | chr8.2:4671806-4671825 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 4671521 | 4674660 | 4671521 | ID=MS.gene58193 |
| chr8.2 | mRNA | 4671521 | 4674660 | 4671521 | ID=MS.gene58193.t1;Parent=MS.gene58193 |
| chr8.2 | exon | 4673717 | 4674660 | 4673717 | ID=MS.gene58193.t1.exon1;Parent=MS.gene58193.t1 |
| chr8.2 | CDS | 4673717 | 4674660 | 4673717 | ID=cds.MS.gene58193.t1;Parent=MS.gene58193.t1 |
| chr8.2 | exon | 4671521 | 4672959 | 4671521 | ID=MS.gene58193.t1.exon2;Parent=MS.gene58193.t1 |
| chr8.2 | CDS | 4671521 | 4672959 | 4671521 | ID=cds.MS.gene58193.t1;Parent=MS.gene58193.t1 |
| Gene Sequence |
| Protein sequence |
