Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62480.t1 | XP_013452069.1 | 96.1 | 361 | 12 | 2 | 1 | 360 | 1 | 360 | 1.60E-185 | 658.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62480.t1 | Q9SAK5 | 59.2 | 358 | 115 | 14 | 4 | 350 | 1 | 338 | 1.2e-83 | 311.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62480.t1 | A0A072U8X3 | 96.1 | 361 | 12 | 2 | 1 | 360 | 1 | 360 | 1.2e-185 | 658.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene62480.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene62480 | 0.816692 | 4.85E-52 | -1.69E-46 |
MS.gene049153 | MS.gene62480 | 0.822404 | 2.41E-53 | -1.69E-46 |
MS.gene050762 | MS.gene62480 | 0.814021 | 1.90E-51 | -1.69E-46 |
MS.gene050763 | MS.gene62480 | 0.816545 | 5.23E-52 | -1.69E-46 |
MS.gene050900 | MS.gene62480 | 0.843688 | 1.20E-58 | -1.69E-46 |
MS.gene051860 | MS.gene62480 | 0.808714 | 2.70E-50 | -1.69E-46 |
MS.gene051983 | MS.gene62480 | 0.808348 | 3.24E-50 | -1.69E-46 |
MS.gene052077 | MS.gene62480 | 0.812048 | 5.16E-51 | -1.69E-46 |
MS.gene052255 | MS.gene62480 | 0.806388 | 8.43E-50 | -1.69E-46 |
MS.gene053184 | MS.gene62480 | 0.836515 | 8.95E-57 | -1.69E-46 |
MS.gene053494 | MS.gene62480 | 0.841014 | 6.14E-58 | -1.69E-46 |
MS.gene053836 | MS.gene62480 | 0.808302 | 3.31E-50 | -1.69E-46 |
MS.gene054183 | MS.gene62480 | 0.806189 | 9.28E-50 | -1.69E-46 |
MS.gene054349 | MS.gene62480 | 0.809013 | 2.33E-50 | -1.69E-46 |
MS.gene054379 | MS.gene62480 | 0.814264 | 1.68E-51 | -1.69E-46 |
MS.gene054542 | MS.gene62480 | 0.806342 | 8.62E-50 | -1.69E-46 |
MS.gene054930 | MS.gene62480 | 0.823511 | 1.33E-53 | -1.69E-46 |
MS.gene055356 | MS.gene62480 | 0.807795 | 4.24E-50 | -1.69E-46 |
MS.gene055358 | MS.gene62480 | 0.812699 | 3.72E-51 | -1.69E-46 |
MS.gene055666 | MS.gene62480 | 0.823249 | 1.53E-53 | -1.69E-46 |
MS.gene055701 | MS.gene62480 | 0.826832 | 2.18E-54 | -1.69E-46 |
MS.gene057394 | MS.gene62480 | 0.802443 | 5.60E-49 | -1.69E-46 |
MS.gene057448 | MS.gene62480 | 0.803152 | 3.99E-49 | -1.69E-46 |
MS.gene057450 | MS.gene62480 | 0.800101 | 1.69E-48 | -1.69E-46 |
MS.gene057469 | MS.gene62480 | 0.827684 | 1.37E-54 | -1.69E-46 |
MS.gene057750 | MS.gene62480 | 0.804046 | 2.61E-49 | -1.69E-46 |
MS.gene05872 | MS.gene62480 | 0.827895 | 1.22E-54 | -1.69E-46 |
MS.gene058949 | MS.gene62480 | 0.830107 | 3.54E-55 | -1.69E-46 |
MS.gene05907 | MS.gene62480 | 0.803326 | 3.68E-49 | -1.69E-46 |
MS.gene059128 | MS.gene62480 | 0.807388 | 5.18E-50 | -1.69E-46 |
MS.gene059609 | MS.gene62480 | 0.810929 | 9.03E-51 | -1.69E-46 |
MS.gene060495 | MS.gene62480 | 0.812839 | 3.46E-51 | -1.69E-46 |
MS.gene061002 | MS.gene62480 | 0.806571 | 7.71E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62480.t1 | MTR_6g444980 | 97.784 | 361 | 6 | 2 | 1 | 360 | 1 | 360 | 0.0 | 724 |
MS.gene62480.t1 | MTR_6g444980 | 90.305 | 361 | 6 | 2 | 1 | 360 | 1 | 333 | 0.0 | 658 |
MS.gene62480.t1 | MTR_2g086450 | 55.882 | 170 | 58 | 3 | 25 | 177 | 35 | 204 | 1.73e-52 | 179 |
MS.gene62480.t1 | MTR_5g027440 | 53.988 | 163 | 60 | 4 | 22 | 171 | 10 | 170 | 9.45e-52 | 174 |
MS.gene62480.t1 | MTR_6g032990 | 54.878 | 164 | 61 | 2 | 28 | 178 | 35 | 198 | 4.17e-51 | 175 |
MS.gene62480.t1 | MTR_4g081710 | 54.839 | 155 | 60 | 3 | 28 | 173 | 10 | 163 | 1.46e-49 | 170 |
MS.gene62480.t1 | MTR_5g041350 | 55.280 | 161 | 55 | 3 | 28 | 175 | 8 | 164 | 4.10e-49 | 169 |
MS.gene62480.t1 | MTR_1g090670 | 49.239 | 197 | 80 | 5 | 14 | 194 | 23 | 215 | 4.13e-47 | 162 |
MS.gene62480.t1 | MTR_2g027800 | 52.632 | 171 | 69 | 4 | 23 | 183 | 27 | 195 | 4.26e-47 | 162 |
MS.gene62480.t1 | MTR_7g088070 | 55.405 | 148 | 62 | 3 | 35 | 181 | 50 | 194 | 5.66e-45 | 156 |
MS.gene62480.t1 | MTR_7g088070 | 55.102 | 147 | 60 | 3 | 35 | 181 | 50 | 190 | 1.47e-43 | 152 |
MS.gene62480.t1 | MTR_2g027860 | 57.746 | 142 | 52 | 3 | 35 | 173 | 49 | 185 | 2.84e-43 | 153 |
MS.gene62480.t1 | MTR_2g027800 | 46.927 | 179 | 53 | 4 | 23 | 183 | 27 | 181 | 1.06e-41 | 148 |
MS.gene62480.t1 | MTR_7g098250 | 48.529 | 136 | 59 | 3 | 35 | 166 | 262 | 390 | 6.98e-34 | 131 |
MS.gene62480.t1 | MTR_7g115530 | 41.772 | 158 | 81 | 3 | 35 | 189 | 218 | 367 | 1.82e-33 | 129 |
MS.gene62480.t1 | MTR_1g080330 | 45.070 | 142 | 75 | 2 | 25 | 166 | 165 | 303 | 5.83e-33 | 127 |
MS.gene62480.t1 | MTR_1g053835 | 43.571 | 140 | 74 | 1 | 31 | 170 | 254 | 388 | 2.92e-30 | 120 |
MS.gene62480.t1 | MTR_7g093030 | 37.640 | 178 | 98 | 5 | 31 | 201 | 208 | 379 | 2.61e-28 | 114 |
MS.gene62480.t1 | MTR_7g068600 | 45.455 | 132 | 66 | 2 | 35 | 163 | 13 | 141 | 1.07e-26 | 106 |
MS.gene62480.t1 | MTR_1g080330 | 45.455 | 121 | 63 | 2 | 25 | 145 | 165 | 282 | 1.65e-25 | 104 |
MS.gene62480.t1 | MTR_1g053800 | 39.103 | 156 | 83 | 2 | 25 | 176 | 167 | 314 | 3.52e-25 | 104 |
MS.gene62480.t1 | MTR_7g115530 | 44.737 | 114 | 54 | 2 | 35 | 145 | 218 | 325 | 9.25e-25 | 103 |
MS.gene62480.t1 | MTR_1g090670 | 42.361 | 144 | 63 | 5 | 67 | 194 | 1 | 140 | 4.18e-20 | 88.2 |
MS.gene62480.t1 | MTR_7g115530 | 63.158 | 57 | 21 | 0 | 35 | 91 | 218 | 274 | 8.52e-20 | 89.0 |
MS.gene62480.t1 | MTR_7g115530 | 63.158 | 57 | 21 | 0 | 35 | 91 | 218 | 274 | 3.26e-19 | 88.2 |
MS.gene62480.t1 | MTR_7g093030 | 54.098 | 61 | 28 | 0 | 31 | 91 | 208 | 268 | 3.17e-18 | 84.3 |
MS.gene62480.t1 | MTR_7g115530 | 66.038 | 53 | 18 | 0 | 35 | 87 | 218 | 270 | 3.22e-18 | 84.0 |
MS.gene62480.t1 | MTR_7g115530 | 66.667 | 51 | 17 | 0 | 35 | 85 | 218 | 268 | 2.47e-17 | 81.6 |
MS.gene62480.t1 | MTR_2g023580 | 61.404 | 57 | 22 | 0 | 36 | 92 | 56 | 112 | 3.68e-16 | 77.4 |
MS.gene62480.t1 | MTR_0223s0040 | 39.062 | 128 | 58 | 3 | 36 | 143 | 19 | 146 | 5.58e-16 | 77.8 |
MS.gene62480.t1 | MTR_3g450310 | 61.111 | 54 | 21 | 0 | 35 | 88 | 19 | 72 | 8.59e-16 | 75.9 |
MS.gene62480.t1 | MTR_6g071625 | 56.667 | 60 | 26 | 0 | 36 | 95 | 203 | 262 | 3.60e-15 | 76.3 |
MS.gene62480.t1 | MTR_7g069660 | 44.444 | 81 | 45 | 0 | 11 | 91 | 47 | 127 | 3.78e-15 | 76.3 |
MS.gene62480.t1 | MTR_3g064840 | 51.429 | 70 | 34 | 0 | 36 | 105 | 275 | 344 | 5.34e-15 | 76.3 |
MS.gene62480.t1 | MTR_1g112370 | 56.452 | 62 | 22 | 1 | 36 | 92 | 23 | 84 | 5.89e-15 | 75.5 |
MS.gene62480.t1 | MTR_1g021520 | 52.239 | 67 | 32 | 0 | 36 | 102 | 127 | 193 | 7.06e-15 | 74.7 |
MS.gene62480.t1 | MTR_8g066310 | 58.929 | 56 | 23 | 0 | 36 | 91 | 174 | 229 | 8.94e-15 | 75.1 |
MS.gene62480.t1 | MTR_1g053830 | 49.091 | 55 | 28 | 0 | 37 | 91 | 20 | 74 | 1.05e-14 | 69.7 |
MS.gene62480.t1 | MTR_5g029470 | 58.929 | 56 | 23 | 0 | 36 | 91 | 220 | 275 | 1.30e-14 | 75.1 |
MS.gene62480.t1 | MTR_5g041350 | 69.565 | 46 | 14 | 0 | 130 | 175 | 8 | 53 | 3.40e-14 | 72.0 |
MS.gene62480.t1 | MTR_8g086410 | 53.571 | 56 | 26 | 0 | 36 | 91 | 112 | 167 | 5.33e-14 | 73.2 |
MS.gene62480.t1 | MTR_8g086410 | 53.571 | 56 | 26 | 0 | 36 | 91 | 110 | 165 | 5.54e-14 | 73.2 |
MS.gene62480.t1 | MTR_5g041350 | 69.565 | 46 | 14 | 0 | 130 | 175 | 30 | 75 | 5.87e-14 | 71.6 |
MS.gene62480.t1 | MTR_2g016220 | 55.357 | 56 | 25 | 0 | 36 | 91 | 90 | 145 | 8.86e-14 | 72.4 |
MS.gene62480.t1 | MTR_2g016220 | 55.357 | 56 | 25 | 0 | 36 | 91 | 90 | 145 | 9.05e-14 | 72.4 |
MS.gene62480.t1 | MTR_2g084230 | 55.357 | 56 | 25 | 0 | 36 | 91 | 98 | 153 | 9.21e-14 | 71.6 |
MS.gene62480.t1 | MTR_2g084230 | 55.357 | 56 | 25 | 0 | 36 | 91 | 98 | 153 | 1.01e-13 | 72.0 |
MS.gene62480.t1 | MTR_4g121020 | 59.322 | 59 | 23 | 1 | 31 | 89 | 107 | 164 | 1.09e-13 | 72.8 |
MS.gene62480.t1 | MTR_4g121020 | 59.322 | 59 | 23 | 1 | 31 | 89 | 211 | 268 | 1.34e-13 | 72.4 |
MS.gene62480.t1 | MTR_4g121020 | 59.322 | 59 | 23 | 1 | 31 | 89 | 211 | 268 | 1.35e-13 | 72.4 |
MS.gene62480.t1 | MTR_7g093010 | 37.500 | 128 | 68 | 4 | 35 | 157 | 213 | 333 | 1.65e-13 | 71.2 |
MS.gene62480.t1 | MTR_1g032570 | 61.818 | 55 | 20 | 1 | 35 | 89 | 131 | 184 | 2.71e-13 | 71.2 |
MS.gene62480.t1 | MTR_1g032570 | 61.818 | 55 | 20 | 1 | 35 | 89 | 200 | 253 | 3.23e-13 | 71.2 |
MS.gene62480.t1 | MTR_8g086410 | 56.000 | 50 | 22 | 0 | 36 | 85 | 112 | 161 | 7.40e-13 | 69.7 |
MS.gene62480.t1 | MTR_2g016220 | 58.000 | 50 | 21 | 0 | 36 | 85 | 90 | 139 | 1.02e-12 | 68.9 |
MS.gene62480.t1 | MTR_4g064730 | 52.174 | 69 | 31 | 2 | 22 | 89 | 117 | 184 | 1.19e-12 | 68.2 |
MS.gene62480.t1 | MTR_1g093080 | 60.000 | 55 | 22 | 0 | 35 | 89 | 211 | 265 | 1.50e-12 | 68.6 |
MS.gene62480.t1 | MTR_2g034960 | 53.333 | 60 | 27 | 1 | 30 | 89 | 206 | 264 | 1.52e-12 | 69.3 |
MS.gene62480.t1 | MTR_7g089010 | 60.000 | 55 | 21 | 1 | 35 | 89 | 91 | 144 | 2.37e-12 | 67.4 |
MS.gene62480.t1 | MTR_5g017980 | 60.000 | 55 | 22 | 0 | 35 | 89 | 193 | 247 | 3.76e-12 | 67.0 |
MS.gene62480.t1 | MTR_4g021790 | 52.542 | 59 | 27 | 1 | 31 | 89 | 164 | 221 | 1.21e-11 | 65.1 |
MS.gene62480.t1 | MTR_5g054300 | 58.182 | 55 | 23 | 0 | 35 | 89 | 198 | 252 | 1.74e-11 | 65.1 |
MS.gene62480.t1 | MTR_4g086835 | 55.172 | 58 | 26 | 0 | 32 | 89 | 271 | 328 | 7.41e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62480.t1 | AT1G79430 | 57.650 | 366 | 108 | 13 | 4 | 350 | 1 | 338 | 3.90e-119 | 349 |
MS.gene62480.t1 | AT1G79430 | 51.827 | 301 | 100 | 12 | 67 | 350 | 1 | 273 | 5.07e-76 | 236 |
MS.gene62480.t1 | AT3G12730 | 71.711 | 152 | 38 | 3 | 24 | 170 | 12 | 163 | 5.10e-70 | 219 |
MS.gene62480.t1 | AT4G13640 | 64.634 | 164 | 49 | 1 | 25 | 179 | 27 | 190 | 5.43e-64 | 206 |
MS.gene62480.t1 | AT3G24120 | 67.702 | 161 | 35 | 4 | 24 | 171 | 30 | 186 | 7.75e-63 | 203 |
MS.gene62480.t1 | AT4G13640 | 63.473 | 167 | 49 | 2 | 25 | 179 | 27 | 193 | 7.24e-62 | 200 |
MS.gene62480.t1 | AT3G24120 | 66.463 | 164 | 35 | 5 | 24 | 171 | 30 | 189 | 1.08e-60 | 197 |
MS.gene62480.t1 | AT3G04030 | 60.355 | 169 | 53 | 4 | 24 | 179 | 34 | 201 | 4.49e-57 | 191 |
MS.gene62480.t1 | AT5G18240 | 60.947 | 169 | 52 | 4 | 24 | 179 | 34 | 201 | 2.06e-56 | 189 |
MS.gene62480.t1 | AT5G18240 | 60.947 | 169 | 52 | 4 | 24 | 179 | 34 | 201 | 2.06e-56 | 189 |
MS.gene62480.t1 | AT3G04030 | 59.172 | 169 | 54 | 5 | 24 | 179 | 34 | 200 | 5.81e-54 | 182 |
MS.gene62480.t1 | AT5G18240 | 59.763 | 169 | 52 | 5 | 24 | 179 | 34 | 199 | 4.18e-53 | 181 |
MS.gene62480.t1 | AT3G04030 | 57.396 | 169 | 52 | 5 | 24 | 179 | 34 | 195 | 1.55e-50 | 174 |
MS.gene62480.t1 | AT5G18240 | 57.988 | 169 | 51 | 5 | 24 | 179 | 34 | 195 | 7.51e-50 | 172 |
MS.gene62480.t1 | AT5G18240 | 57.988 | 169 | 51 | 5 | 24 | 179 | 34 | 195 | 7.51e-50 | 172 |
MS.gene62480.t1 | AT1G69580 | 46.117 | 206 | 83 | 6 | 27 | 215 | 26 | 220 | 1.23e-48 | 167 |
MS.gene62480.t1 | AT1G69580 | 45.631 | 206 | 85 | 5 | 27 | 215 | 26 | 221 | 1.97e-48 | 167 |
MS.gene62480.t1 | AT5G45580 | 47.647 | 170 | 68 | 3 | 25 | 174 | 13 | 181 | 1.19e-43 | 152 |
MS.gene62480.t1 | AT5G45580 | 43.716 | 183 | 86 | 2 | 29 | 195 | 1 | 182 | 9.29e-43 | 150 |
MS.gene62480.t1 | AT2G01060 | 56.338 | 142 | 53 | 3 | 35 | 173 | 15 | 150 | 1.73e-42 | 150 |
MS.gene62480.t1 | AT3G12730 | 64.220 | 109 | 34 | 3 | 67 | 170 | 1 | 109 | 2.24e-39 | 138 |
MS.gene62480.t1 | AT3G13040 | 44.785 | 163 | 75 | 5 | 21 | 170 | 218 | 378 | 6.41e-34 | 130 |
MS.gene62480.t1 | AT3G13040 | 44.785 | 163 | 75 | 5 | 21 | 170 | 218 | 378 | 6.41e-34 | 130 |
MS.gene62480.t1 | AT3G13040 | 44.785 | 163 | 75 | 5 | 21 | 170 | 218 | 378 | 6.41e-34 | 130 |
MS.gene62480.t1 | AT5G06800 | 47.407 | 135 | 66 | 3 | 35 | 166 | 192 | 324 | 1.37e-31 | 123 |
MS.gene62480.t1 | AT4G28610 | 45.588 | 136 | 64 | 3 | 35 | 166 | 225 | 354 | 1.58e-31 | 123 |
MS.gene62480.t1 | AT5G06800 | 47.368 | 133 | 64 | 3 | 35 | 166 | 192 | 319 | 5.89e-31 | 121 |
MS.gene62480.t1 | AT5G29000 | 40.964 | 166 | 93 | 4 | 35 | 199 | 188 | 349 | 8.31e-31 | 120 |
MS.gene62480.t1 | AT5G29000 | 40.964 | 166 | 93 | 4 | 35 | 199 | 188 | 349 | 8.31e-31 | 120 |
MS.gene62480.t1 | AT5G29000 | 40.964 | 166 | 93 | 4 | 35 | 199 | 231 | 392 | 1.74e-30 | 120 |
MS.gene62480.t1 | AT3G04030 | 54.762 | 126 | 43 | 4 | 67 | 179 | 1 | 125 | 6.72e-30 | 117 |
MS.gene62480.t1 | AT3G04450 | 40.000 | 155 | 79 | 3 | 35 | 183 | 198 | 344 | 2.55e-29 | 117 |
MS.gene62480.t1 | AT3G04450 | 40.000 | 155 | 79 | 3 | 35 | 183 | 198 | 344 | 2.55e-29 | 117 |
MS.gene62480.t1 | AT3G04450 | 40.000 | 155 | 79 | 3 | 35 | 183 | 238 | 384 | 4.03e-29 | 117 |
MS.gene62480.t1 | AT2G20400 | 42.000 | 150 | 79 | 3 | 35 | 181 | 231 | 375 | 1.57e-26 | 109 |
MS.gene62480.t1 | AT2G20400 | 41.333 | 150 | 79 | 2 | 35 | 181 | 231 | 374 | 4.14e-26 | 108 |
MS.gene62480.t1 | AT3G04030 | 50.794 | 126 | 42 | 5 | 67 | 179 | 1 | 119 | 1.18e-23 | 100 |
MS.gene62480.t1 | AT5G18240 | 50.794 | 126 | 42 | 5 | 67 | 179 | 1 | 119 | 2.88e-23 | 99.0 |
MS.gene62480.t1 | AT2G06020 | 59.375 | 64 | 26 | 0 | 28 | 91 | 79 | 142 | 8.22e-21 | 92.0 |
MS.gene62480.t1 | AT2G01060 | 48.598 | 107 | 46 | 3 | 70 | 173 | 1 | 101 | 2.21e-20 | 89.4 |
MS.gene62480.t1 | AT5G06800 | 59.649 | 57 | 23 | 0 | 35 | 91 | 192 | 248 | 3.80e-18 | 84.0 |
MS.gene62480.t1 | AT5G29000 | 57.895 | 57 | 24 | 0 | 35 | 91 | 231 | 287 | 3.20e-17 | 81.6 |
MS.gene62480.t1 | AT3G04450 | 56.140 | 57 | 25 | 0 | 35 | 91 | 238 | 294 | 3.47e-17 | 81.6 |
MS.gene62480.t1 | AT1G14600 | 50.685 | 73 | 31 | 1 | 21 | 88 | 4 | 76 | 2.34e-16 | 78.6 |
MS.gene62480.t1 | AT2G40260 | 60.714 | 56 | 22 | 0 | 36 | 91 | 83 | 138 | 8.74e-16 | 78.6 |
MS.gene62480.t1 | AT4G04605 | 58.491 | 53 | 22 | 0 | 36 | 88 | 15 | 67 | 1.03e-15 | 75.9 |
MS.gene62480.t1 | AT2G42660 | 58.929 | 56 | 23 | 0 | 36 | 91 | 51 | 106 | 1.19e-15 | 76.3 |
MS.gene62480.t1 | AT2G02060 | 57.627 | 59 | 25 | 0 | 34 | 92 | 28 | 86 | 2.74e-15 | 75.5 |
MS.gene62480.t1 | AT2G02060 | 57.627 | 59 | 25 | 0 | 34 | 92 | 28 | 86 | 2.74e-15 | 75.5 |
MS.gene62480.t1 | AT5G16560 | 56.667 | 60 | 26 | 0 | 36 | 95 | 220 | 279 | 7.41e-15 | 75.9 |
MS.gene62480.t1 | AT1G32240 | 56.667 | 60 | 26 | 0 | 36 | 95 | 214 | 273 | 7.47e-15 | 75.5 |
MS.gene62480.t1 | AT1G32240 | 56.667 | 60 | 26 | 0 | 36 | 95 | 214 | 273 | 9.61e-15 | 75.5 |
MS.gene62480.t1 | AT2G38300 | 57.143 | 56 | 24 | 0 | 36 | 91 | 55 | 110 | 1.79e-14 | 73.9 |
MS.gene62480.t1 | AT5G42630 | 57.143 | 56 | 24 | 0 | 36 | 91 | 106 | 161 | 1.99e-14 | 72.4 |
MS.gene62480.t1 | AT4G17695 | 32.727 | 110 | 74 | 0 | 36 | 145 | 165 | 274 | 2.60e-14 | 73.6 |
MS.gene62480.t1 | AT5G42630 | 57.143 | 56 | 24 | 0 | 36 | 91 | 106 | 161 | 3.02e-14 | 72.8 |
MS.gene62480.t1 | AT3G46640 | 54.286 | 70 | 28 | 2 | 23 | 89 | 129 | 197 | 2.42e-13 | 70.5 |
MS.gene62480.t1 | AT3G46640 | 54.286 | 70 | 28 | 2 | 23 | 89 | 129 | 197 | 2.42e-13 | 70.5 |
MS.gene62480.t1 | AT3G46640 | 54.286 | 70 | 28 | 2 | 23 | 89 | 129 | 197 | 2.91e-13 | 70.5 |
MS.gene62480.t1 | AT5G59570 | 52.857 | 70 | 29 | 2 | 23 | 89 | 126 | 194 | 4.85e-13 | 69.3 |
MS.gene62480.t1 | AT5G59570 | 52.857 | 70 | 29 | 2 | 23 | 89 | 126 | 194 | 4.85e-13 | 69.3 |
MS.gene62480.t1 | AT4G04580 | 50.943 | 53 | 26 | 0 | 36 | 88 | 15 | 67 | 7.46e-13 | 66.6 |
MS.gene62480.t1 | AT5G05090 | 60.000 | 55 | 21 | 1 | 35 | 89 | 81 | 134 | 8.70e-13 | 68.2 |
MS.gene62480.t1 | AT3G10760 | 60.000 | 55 | 21 | 1 | 35 | 89 | 105 | 158 | 1.19e-12 | 68.6 |
MS.gene62480.t1 | AT4G37180 | 55.172 | 58 | 26 | 0 | 37 | 94 | 212 | 269 | 1.76e-12 | 68.2 |
MS.gene62480.t1 | AT4G37180 | 55.172 | 58 | 26 | 0 | 37 | 94 | 219 | 276 | 2.03e-12 | 68.2 |
MS.gene62480.t1 | AT2G40970 | 60.000 | 55 | 21 | 1 | 35 | 89 | 105 | 158 | 2.36e-12 | 66.6 |
MS.gene62480.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 35 | 89 | 167 | 220 | 6.95e-12 | 67.4 |
MS.gene62480.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 35 | 89 | 237 | 290 | 8.35e-12 | 67.0 |
MS.gene62480.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 35 | 89 | 237 | 290 | 8.48e-12 | 67.0 |
MS.gene62480.t1 | AT3G25790 | 60.000 | 50 | 20 | 0 | 40 | 89 | 201 | 250 | 9.18e-12 | 66.2 |
MS.gene62480.t1 | AT5G58080 | 55.172 | 58 | 25 | 1 | 32 | 89 | 191 | 247 | 9.82e-12 | 66.6 |
MS.gene62480.t1 | AT2G01760 | 54.545 | 55 | 24 | 1 | 35 | 89 | 135 | 188 | 1.16e-11 | 65.5 |
MS.gene62480.t1 | AT1G49560 | 60.000 | 55 | 22 | 0 | 35 | 89 | 192 | 246 | 1.53e-11 | 65.1 |
MS.gene62480.t1 | AT2G01760 | 54.545 | 55 | 24 | 1 | 35 | 89 | 200 | 253 | 2.13e-11 | 65.1 |
MS.gene62480.t1 | AT2G01760 | 54.545 | 55 | 24 | 1 | 35 | 89 | 228 | 281 | 3.01e-11 | 64.7 |
MS.gene62480.t1 | AT5G44190 | 55.556 | 54 | 23 | 1 | 35 | 88 | 147 | 199 | 5.80e-11 | 63.9 |
MS.gene62480.t1 | AT5G44190 | 55.556 | 54 | 23 | 1 | 35 | 88 | 147 | 199 | 7.50e-11 | 63.2 |
MS.gene62480.t1 | AT1G13300 | 54.545 | 55 | 25 | 0 | 35 | 89 | 181 | 235 | 9.32e-11 | 63.2 |
Find 92 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGGGACTATTGAAAGAATT+TGG | 0.175321 | 2.1:+31548080 | MS.gene62480:CDS |
GATTTAAGGCTTCAAGATTT+AGG | 0.193912 | 2.1:+31548320 | MS.gene62480:CDS |
TGCTACAACTAATAACTTAA+AGG | 0.195092 | 2.1:+31548025 | MS.gene62480:CDS |
TAATGTGGAGTGATGATTTA+AGG | 0.215191 | 2.1:+31548306 | MS.gene62480:CDS |
AAATCATCACTCCACATTAA+TGG | 0.218919 | 2.1:-31548302 | None:intergenic |
TTTCTATTACATAGAAATTT+AGG | 0.227246 | 2.1:+31547127 | MS.gene62480:intron |
TTCATAGTTGAAGGCTTCTT+TGG | 0.249952 | 2.1:-31546486 | None:intergenic |
AACTTAAAGGGCGTTGTTCT+TGG | 0.261188 | 2.1:+31548038 | MS.gene62480:CDS |
CCACTATAAGGGTTAGTGTT+AGG | 0.267537 | 2.1:-31548266 | None:intergenic |
GCATATATGCATGATGATCT+AGG | 0.285163 | 2.1:-31548202 | None:intergenic |
ATTTAAGGCTTCAAGATTTA+GGG | 0.292742 | 2.1:+31548321 | MS.gene62480:CDS |
AATCATCACTCCACATTAAT+GGG | 0.299412 | 2.1:-31548301 | None:intergenic |
CAGTGCTTTCTTATGGTGAT+AGG | 0.302053 | 2.1:-31548566 | None:intergenic |
TAAAACTATCATGAGGGTTA+TGG | 0.306320 | 2.1:+31546765 | MS.gene62480:CDS |
GAAATACATGCAAAGTATAT+TGG | 0.312337 | 2.1:+31547962 | MS.gene62480:CDS |
GGAATTTCAGTGCTTTCTTA+TGG | 0.312601 | 2.1:-31548573 | None:intergenic |
ATTCAATGATCACTCAATTA+AGG | 0.327183 | 2.1:+31547173 | MS.gene62480:CDS |
GTCCAACGAAGACGAGGTTT+TGG | 0.340512 | 2.1:-31546567 | None:intergenic |
TCAAATTGCACCACCATCAT+TGG | 0.344106 | 2.1:+31548388 | MS.gene62480:CDS |
CCATCTCAAGAGCCATCTTC+AGG | 0.344761 | 2.1:+31546810 | MS.gene62480:CDS |
TGAAGAGATGGCCCTCTTCT+TGG | 0.346647 | 2.1:-31548527 | None:intergenic |
CACTATAAGGGTTAGTGTTA+GGG | 0.355596 | 2.1:-31548265 | None:intergenic |
AAAGCTTATCAGACACTTGC+AGG | 0.356175 | 2.1:+31547987 | MS.gene62480:CDS |
GCTTCCTCTTCGGCTATGAT+TGG | 0.358723 | 2.1:+31547352 | MS.gene62480:CDS |
ACCTCATGGAATGGCTGAAA+TGG | 0.378868 | 2.1:+31548061 | MS.gene62480:CDS |
GAGCTTCAATTCGTAGTTGA+AGG | 0.381017 | 2.1:-31547935 | None:intergenic |
AAAACTATCATGAGGGTTAT+GGG | 0.387308 | 2.1:+31546766 | MS.gene62480:CDS |
AAAATTTCCCCTTGAAGTAA+AGG | 0.387443 | 2.1:-31548455 | None:intergenic |
ACTAACCCTTATAGTGGAAA+TGG | 0.388772 | 2.1:+31548272 | MS.gene62480:CDS |
CAGCATCAACAAAACGTTCA+TGG | 0.392478 | 2.1:-31546599 | None:intergenic |
GATACAAAGCCTTTACTTCA+AGG | 0.414154 | 2.1:+31548446 | MS.gene62480:CDS |
TCATGTGAATTCATAGTTGA+AGG | 0.417635 | 2.1:-31546495 | None:intergenic |
CCTAACACTAACCCTTATAG+TGG | 0.433462 | 2.1:+31548266 | MS.gene62480:CDS |
GGCGTTGTTCTTGGACCTCA+TGG | 0.435582 | 2.1:+31548047 | MS.gene62480:CDS |
ATGAGGGTTATGGGTGTAAA+GGG | 0.439033 | 2.1:+31546775 | MS.gene62480:CDS |
GTTGATGCTGTTACTCAGCT+TGG | 0.442902 | 2.1:+31546612 | MS.gene62480:CDS |
CATGAGGGTTATGGGTGTAA+AGG | 0.448006 | 2.1:+31546774 | MS.gene62480:CDS |
AGGGACAGCTTCATCATGCT+TGG | 0.454830 | 2.1:+31548340 | MS.gene62480:CDS |
TTTGTATTCAAACCTGAAGA+TGG | 0.457979 | 2.1:-31546822 | None:intergenic |
TAAGGGTTAGTGTTAGGGTT+AGG | 0.458671 | 2.1:-31548260 | None:intergenic |
ACGGAATACTGCTTCCTCTT+CGG | 0.462582 | 2.1:+31547342 | MS.gene62480:CDS |
GCTACAACTAATAACTTAAA+GGG | 0.463497 | 2.1:+31548026 | MS.gene62480:CDS |
CATATATGCATGATGATCTA+GGG | 0.467621 | 2.1:-31548201 | None:intergenic |
TGAAAAGATGTAAAACTAAG+AGG | 0.472361 | 2.1:-31548107 | None:intergenic |
GTGATCATTGAATTCCTTGT+GGG | 0.478768 | 2.1:-31547163 | None:intergenic |
ACTTAAGCCTTGGCAAGAAA+AGG | 0.483728 | 2.1:+31548237 | MS.gene62480:CDS |
CACCACCACCGCCTCCGAAA+AGG | 0.487952 | 2.1:-31548139 | None:intergenic |
ATAGTTGAAGGCTTCTTTGG+AGG | 0.491992 | 2.1:-31546483 | None:intergenic |
GATAGACCCATGTGTGTTCA+AGG | 0.496295 | 2.1:+31546516 | MS.gene62480:CDS |
ATTACATAGAAATTTAGGCT+TGG | 0.496295 | 2.1:+31547132 | MS.gene62480:intron |
CCTCATGGAATGGCTGAAAT+GGG | 0.498758 | 2.1:+31548062 | MS.gene62480:CDS |
ATACAAAGCCTTTACTTCAA+GGG | 0.499005 | 2.1:+31548447 | MS.gene62480:CDS |
TAGTTGAAGGCTTCTTTGGA+GGG | 0.504455 | 2.1:-31546482 | None:intergenic |
TGAATTTGATCACCTTTGAA+AGG | 0.506520 | 2.1:-31548368 | None:intergenic |
ATGGCTCTTGAGATGGTAAA+GGG | 0.513730 | 2.1:-31546803 | None:intergenic |
ACCCAAAACCTCGTCTTCGT+TGG | 0.527604 | 2.1:+31546565 | MS.gene62480:CDS |
GATGGCCCTCTTCTTGGTGA+GGG | 0.531501 | 2.1:-31548521 | None:intergenic |
TACAAAGCCTTTACTTCAAG+GGG | 0.533890 | 2.1:+31548448 | MS.gene62480:CDS |
TCACTTCCTCTATCCAATGA+TGG | 0.535417 | 2.1:-31548401 | None:intergenic |
GATGGCTCTTGAGATGGTAA+AGG | 0.536000 | 2.1:-31546804 | None:intergenic |
TGTTCTTGGACCTCATGGAA+TGG | 0.536570 | 2.1:+31548052 | MS.gene62480:CDS |
AGATGGCCCTCTTCTTGGTG+AGG | 0.537995 | 2.1:-31548522 | None:intergenic |
GCACCACCATCATTGGATAG+AGG | 0.539525 | 2.1:+31548395 | MS.gene62480:CDS |
ATCAATGAGAACTTAAGCCT+TGG | 0.540269 | 2.1:+31548227 | MS.gene62480:CDS |
ATGTGTGTTCAAGGTGACTC+AGG | 0.543370 | 2.1:+31546525 | MS.gene62480:CDS |
CCTGAAGATGGCTCTTGAGA+TGG | 0.549039 | 2.1:-31546810 | None:intergenic |
TGCTTGGATGATCCTTTCAA+AGG | 0.557843 | 2.1:+31548356 | MS.gene62480:CDS |
GATGCTGTTACTCAGCTTGG+AGG | 0.559349 | 2.1:+31546615 | MS.gene62480:CDS |
CAACTACGAATTGAAGCTCA+AGG | 0.565636 | 2.1:+31547939 | MS.gene62480:CDS |
ATGCATACTCATTCATGTTG+CGG | 0.570245 | 2.1:-31547375 | None:intergenic |
ATTCTTTCAGCATGAAGAGA+TGG | 0.571803 | 2.1:-31548539 | None:intergenic |
GACACTTGCAGGTGAAAACA+TGG | 0.571973 | 2.1:+31547998 | MS.gene62480:CDS |
CTTCAGCTTTAGAACTGCAA+CGG | 0.582298 | 2.1:+31547323 | MS.gene62480:CDS |
TGAGTCACCTTGAACACACA+TGG | 0.598179 | 2.1:-31546523 | None:intergenic |
GAAAGACCCTCACCAAGAAG+AGG | 0.599610 | 2.1:+31548515 | MS.gene62480:CDS |
AATGATCACTCAATTAAGGA+TGG | 0.602702 | 2.1:+31547177 | MS.gene62480:CDS |
TCAATTAAGGATGGTATGAG+AGG | 0.611305 | 2.1:+31547186 | MS.gene62480:CDS |
AAAGACCCTCACCAAGAAGA+GGG | 0.613710 | 2.1:+31548516 | MS.gene62480:CDS |
GCTTGGAAAGCAACCCCACA+AGG | 0.615422 | 2.1:+31547149 | MS.gene62480:CDS |
CCACTCCTAAAACTATCATG+AGG | 0.619863 | 2.1:+31546758 | MS.gene62480:CDS |
ACTTGACCTTCAGCAAAACA+TGG | 0.622471 | 2.1:+31548169 | MS.gene62480:CDS |
TGATCATTGAATTCCTTGTG+GGG | 0.623211 | 2.1:-31547162 | None:intergenic |
AACTACGAATTGAAGCTCAA+GGG | 0.632870 | 2.1:+31547940 | MS.gene62480:CDS |
CACTCCTAAAACTATCATGA+GGG | 0.634268 | 2.1:+31546759 | MS.gene62480:CDS |
AGTGATCATTGAATTCCTTG+TGG | 0.639862 | 2.1:-31547164 | None:intergenic |
TCAACAGTCCAACGAAGACG+AGG | 0.644546 | 2.1:-31546573 | None:intergenic |
TGTAATCAGGATGCAAATTG+AGG | 0.645996 | 2.1:+31547591 | MS.gene62480:intron |
CCCATTTCAGCCATTCCATG+AGG | 0.656331 | 2.1:-31548062 | None:intergenic |
CTTCCTCTATCCAATGATGG+TGG | 0.659128 | 2.1:-31548398 | None:intergenic |
GCGGCCAATCATAGCCGAAG+AGG | 0.663510 | 2.1:-31547356 | None:intergenic |
AAGACTACATGAGCAACTTG+AGG | 0.669000 | 2.1:+31547621 | MS.gene62480:CDS |
GAGTCACCTTGAACACACAT+GGG | 0.682407 | 2.1:-31546522 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAAAAACAATAAAAAAAAAA+AGG | - | chr2.1:31547099-31547118 | None:intergenic | 10.0% |
!!! | CTTTTTGTTATTTTTATATT+TGG | + | chr2.1:31546690-31546709 | MS.gene62480:intron | 10.0% |
!!! | TTTTAATTTTTTGAAGTTTA+TGG | + | chr2.1:31547244-31547263 | MS.gene62480:intron | 10.0% |
!! | ATACTAATTATGTAACAAAT+TGG | - | chr2.1:31547860-31547879 | None:intergenic | 15.0% |
!! | TTAAAATAAGAGATGTATAA+TGG | - | chr2.1:31547416-31547435 | None:intergenic | 15.0% |
!! | TTTCTATTACATAGAAATTT+AGG | + | chr2.1:31547127-31547146 | MS.gene62480:intron | 15.0% |
!!! | TACATAATTAGTATTTTCAA+TGG | + | chr2.1:31547866-31547885 | MS.gene62480:intron | 15.0% |
!!! | TTTATTATGGTTAATTTTTC+AGG | + | chr2.1:31547044-31547063 | MS.gene62480:intron | 15.0% |
!! | ATAATACATAATCATGTGTA+AGG | - | chr2.1:31547271-31547290 | None:intergenic | 20.0% |
!! | ATTGACAAGATCTTTATATA+TGG | + | chr2.1:31547297-31547316 | MS.gene62480:intron | 20.0% |
!! | CATTACTAAGATATTTATGA+TGG | + | chr2.1:31546715-31546734 | MS.gene62480:intron | 20.0% |
!! | TGAATTTAGTTGTATATTTC+AGG | + | chr2.1:31547902-31547921 | MS.gene62480:intron | 20.0% |
!! | TTCTTTACAACACTTTAATA+TGG | + | chr2.1:31546879-31546898 | MS.gene62480:intron | 20.0% |
!! | TTTATAAGTGCACATATATT+TGG | + | chr2.1:31547681-31547700 | MS.gene62480:intron | 20.0% |
!!! | TGATCTGAATCTTTTTATTA+TGG | + | chr2.1:31547031-31547050 | MS.gene62480:intron | 20.0% |
!!! | TTGTTTTGAATCTTTTTGTT+GGG | + | chr2.1:31547500-31547519 | MS.gene62480:intron | 20.0% |
!!! | TTTGTTTTGAATCTTTTTGT+TGG | + | chr2.1:31547499-31547518 | MS.gene62480:intron | 20.0% |
! | AATTGTATATATAGTGCATC+CGG | + | chr2.1:31547823-31547842 | MS.gene62480:intron | 25.0% |
! | ATTACATAGAAATTTAGGCT+TGG | + | chr2.1:31547132-31547151 | MS.gene62480:intron | 25.0% |
! | ATTCAATGATCACTCAATTA+AGG | + | chr2.1:31547173-31547192 | MS.gene62480:CDS | 25.0% |
! | CTATGTAATAGAAACAACAA+AGG | - | chr2.1:31547121-31547140 | None:intergenic | 25.0% |
! | GAAATACATGCAAAGTATAT+TGG | + | chr2.1:31547962-31547981 | MS.gene62480:CDS | 25.0% |
! | GCTACAACTAATAACTTAAA+GGG | + | chr2.1:31548026-31548045 | MS.gene62480:CDS | 25.0% |
! | TGAAAAGATGTAAAACTAAG+AGG | - | chr2.1:31548110-31548129 | None:intergenic | 25.0% |
! | TGCTACAACTAATAACTTAA+AGG | + | chr2.1:31548025-31548044 | MS.gene62480:CDS | 25.0% |
! | TTTGAGAAGAGAAAGAAAAA+AGG | - | chr2.1:31546666-31546685 | None:intergenic | 25.0% |
!! | ATTTAAGGCTTCAAGATTTA+GGG | + | chr2.1:31548321-31548340 | MS.gene62480:CDS | 25.0% |
!! | TTTTTCCATTTCCACTATAA+GGG | - | chr2.1:31548280-31548299 | None:intergenic | 25.0% |
!!! | TAAAAATTATTTTGCTGCAC+CGG | + | chr2.1:31546992-31547011 | MS.gene62480:intron | 25.0% |
!!! | TGGTTTCTTTAATTTTTCAG+AGG | + | chr2.1:31546735-31546754 | MS.gene62480:intron | 25.0% |
!!! | TGTTTTGAATCTTTTTGTTG+GGG | + | chr2.1:31547501-31547520 | MS.gene62480:intron | 25.0% |
!!! | TTTTTTCCATTTCCACTATA+AGG | - | chr2.1:31548281-31548300 | None:intergenic | 25.0% |
AAAACTATCATGAGGGTTAT+GGG | + | chr2.1:31546766-31546785 | MS.gene62480:CDS | 30.0% | |
AAAATTTCCCCTTGAAGTAA+AGG | - | chr2.1:31548458-31548477 | None:intergenic | 30.0% | |
AAATCATCACTCCACATTAA+TGG | - | chr2.1:31548305-31548324 | None:intergenic | 30.0% | |
AATCATCACTCCACATTAAT+GGG | - | chr2.1:31548304-31548323 | None:intergenic | 30.0% | |
AATGATCACTCAATTAAGGA+TGG | + | chr2.1:31547177-31547196 | MS.gene62480:CDS | 30.0% | |
ATACAAAGCCTTTACTTCAA+GGG | + | chr2.1:31548447-31548466 | MS.gene62480:CDS | 30.0% | |
ATGGAAAAAACCCATTAATG+TGG | + | chr2.1:31548291-31548310 | MS.gene62480:CDS | 30.0% | |
ATGGGACTATTGAAAGAATT+TGG | + | chr2.1:31548080-31548099 | MS.gene62480:CDS | 30.0% | |
CATATATGCATGATGATCTA+GGG | - | chr2.1:31548204-31548223 | None:intergenic | 30.0% | |
CTTGTACAAAAATTTGCAAC+CGG | + | chr2.1:31546946-31546965 | MS.gene62480:intron | 30.0% | |
GTTTGACGAAATTATAACGA+TGG | + | chr2.1:31547715-31547734 | MS.gene62480:intron | 30.0% | |
TAAAACTATCATGAGGGTTA+TGG | + | chr2.1:31546765-31546784 | MS.gene62480:CDS | 30.0% | |
TAATGTGGAGTGATGATTTA+AGG | + | chr2.1:31548306-31548325 | MS.gene62480:CDS | 30.0% | |
TCATGTGAATTCATAGTTGA+AGG | - | chr2.1:31546498-31546517 | None:intergenic | 30.0% | |
TGAAAAACTATGCACTTTGA+AGG | - | chr2.1:31547759-31547778 | None:intergenic | 30.0% | |
TGAATTTGATCACCTTTGAA+AGG | - | chr2.1:31548371-31548390 | None:intergenic | 30.0% | |
TTGAATTAGTAACTCACACA+AGG | + | chr2.1:31547564-31547583 | MS.gene62480:intron | 30.0% | |
TTTGTATTCAAACCTGAAGA+TGG | - | chr2.1:31546825-31546844 | None:intergenic | 30.0% | |
! | AAGAGATGTATAATGGAAGA+AGG | - | chr2.1:31547409-31547428 | None:intergenic | 30.0% |
! | AGAGATGTATAATGGAAGAA+GGG | - | chr2.1:31547408-31547427 | None:intergenic | 30.0% |
! | ATAACCCTCATGATAGTTTT+AGG | - | chr2.1:31546766-31546785 | None:intergenic | 30.0% |
! | GATTTAAGGCTTCAAGATTT+AGG | + | chr2.1:31548320-31548339 | MS.gene62480:CDS | 30.0% |
! | TGCACATATATTTGGAATCA+TGG | + | chr2.1:31547689-31547708 | MS.gene62480:intron | 30.0% |
! | TTACTTCAAGGGGAAATTTT+AGG | + | chr2.1:31548458-31548477 | MS.gene62480:CDS | 30.0% |
! | TTTCAAGATCTTGACCTTTT+CGG | + | chr2.1:31548125-31548144 | MS.gene62480:CDS | 30.0% |
!! | GTTTTGAATCTTTTTGTTGG+GGG | + | chr2.1:31547502-31547521 | MS.gene62480:intron | 30.0% |
AACTACGAATTGAAGCTCAA+GGG | + | chr2.1:31547940-31547959 | MS.gene62480:CDS | 35.0% | |
AGACAACATACTACTGTATC+CGG | - | chr2.1:31546968-31546987 | None:intergenic | 35.0% | |
AGTGATCATTGAATTCCTTG+TGG | - | chr2.1:31547167-31547186 | None:intergenic | 35.0% | |
ATCAATGAGAACTTAAGCCT+TGG | + | chr2.1:31548227-31548246 | MS.gene62480:CDS | 35.0% | |
ATGCATACTCATTCATGTTG+CGG | - | chr2.1:31547378-31547397 | None:intergenic | 35.0% | |
ATTCTTTCAGCATGAAGAGA+TGG | - | chr2.1:31548542-31548561 | None:intergenic | 35.0% | |
CACTCCTAAAACTATCATGA+GGG | + | chr2.1:31546759-31546778 | MS.gene62480:CDS | 35.0% | |
GAGAAGAGAAAGAAAAAAGG+TGG | - | chr2.1:31546663-31546682 | None:intergenic | 35.0% | |
GATACAAAGCCTTTACTTCA+AGG | + | chr2.1:31548446-31548465 | MS.gene62480:CDS | 35.0% | |
GCATATATGCATGATGATCT+AGG | - | chr2.1:31548205-31548224 | None:intergenic | 35.0% | |
GTGATCATTGAATTCCTTGT+GGG | - | chr2.1:31547166-31547185 | None:intergenic | 35.0% | |
TACAAAGCCTTTACTTCAAG+GGG | + | chr2.1:31548448-31548467 | MS.gene62480:CDS | 35.0% | |
TCAATTAAGGATGGTATGAG+AGG | + | chr2.1:31547186-31547205 | MS.gene62480:CDS | 35.0% | |
TGATCATTGAATTCCTTGTG+GGG | - | chr2.1:31547165-31547184 | None:intergenic | 35.0% | |
TGTAATCAGGATGCAAATTG+AGG | + | chr2.1:31547591-31547610 | MS.gene62480:intron | 35.0% | |
TTCATAGTTGAAGGCTTCTT+TGG | - | chr2.1:31546489-31546508 | None:intergenic | 35.0% | |
TTGAAGGTTGAACGAAATCA+CGG | - | chr2.1:31547743-31547762 | None:intergenic | 35.0% | |
! | ACTAACCCTTATAGTGGAAA+TGG | + | chr2.1:31548272-31548291 | MS.gene62480:CDS | 35.0% |
! | CACTATAAGGGTTAGTGTTA+GGG | - | chr2.1:31548268-31548287 | None:intergenic | 35.0% |
! | GTATAATGGAAGAAGGGAAT+TGG | - | chr2.1:31547402-31547421 | None:intergenic | 35.0% |
! | GTGACACTTCTTTTCTTTCT+AGG | + | chr2.1:31547208-31547227 | MS.gene62480:intron | 35.0% |
!! | ATCCTTTGAAACCAGTTGTA+CGG | + | chr2.1:31547793-31547812 | MS.gene62480:intron | 35.0% |
!! | CAAATTGGATTCTCTAAAGC+CGG | - | chr2.1:31547845-31547864 | None:intergenic | 35.0% |
AAAGCTTATCAGACACTTGC+AGG | + | chr2.1:31547987-31548006 | MS.gene62480:CDS | 40.0% | |
AAGACTACATGAGCAACTTG+AGG | + | chr2.1:31547621-31547640 | MS.gene62480:CDS | 40.0% | |
AATCATCTCCTACGATGCAA+AGG | + | chr2.1:31546909-31546928 | MS.gene62480:intron | 40.0% | |
ACTTAAGCCTTGGCAAGAAA+AGG | + | chr2.1:31548237-31548256 | MS.gene62480:CDS | 40.0% | |
ACTTGACCTTCAGCAAAACA+TGG | + | chr2.1:31548169-31548188 | MS.gene62480:CDS | 40.0% | |
ATAGTTGAAGGCTTCTTTGG+AGG | - | chr2.1:31546486-31546505 | None:intergenic | 40.0% | |
ATGAGGGTTATGGGTGTAAA+GGG | + | chr2.1:31546775-31546794 | MS.gene62480:CDS | 40.0% | |
ATGGCTCTTGAGATGGTAAA+GGG | - | chr2.1:31546806-31546825 | None:intergenic | 40.0% | |
CAACTACGAATTGAAGCTCA+AGG | + | chr2.1:31547939-31547958 | MS.gene62480:CDS | 40.0% | |
CAGCATCAACAAAACGTTCA+TGG | - | chr2.1:31546602-31546621 | None:intergenic | 40.0% | |
CAGTGCTTTCTTATGGTGAT+AGG | - | chr2.1:31548569-31548588 | None:intergenic | 40.0% | |
CCACTCCTAAAACTATCATG+AGG | + | chr2.1:31546758-31546777 | MS.gene62480:CDS | 40.0% | |
CCTAACACTAACCCTTATAG+TGG | + | chr2.1:31548266-31548285 | MS.gene62480:CDS | 40.0% | |
GAGCTTCAATTCGTAGTTGA+AGG | - | chr2.1:31547938-31547957 | None:intergenic | 40.0% | |
GGTGAAAGAATAGTACTGTC+AGG | - | chr2.1:31546642-31546661 | None:intergenic | 40.0% | |
TAGTTGAAGGCTTCTTTGGA+GGG | - | chr2.1:31546485-31546504 | None:intergenic | 40.0% | |
TCAAATTGCACCACCATCAT+TGG | + | chr2.1:31548388-31548407 | MS.gene62480:CDS | 40.0% | |
TCACTTCCTCTATCCAATGA+TGG | - | chr2.1:31548404-31548423 | None:intergenic | 40.0% | |
TGCTTGGATGATCCTTTCAA+AGG | + | chr2.1:31548356-31548375 | MS.gene62480:CDS | 40.0% | |
! | CAACTGGTTTCAAAGGATCT+AGG | - | chr2.1:31547791-31547810 | None:intergenic | 40.0% |
! | CCACTATAAGGGTTAGTGTT+AGG | - | chr2.1:31548269-31548288 | None:intergenic | 40.0% |
! | TAAGGGTTAGTGTTAGGGTT+AGG | - | chr2.1:31548263-31548282 | None:intergenic | 40.0% |
!! | AACTTAAAGGGCGTTGTTCT+TGG | + | chr2.1:31548038-31548057 | MS.gene62480:CDS | 40.0% |
!! | CACACAAGGTTGATGTAATC+AGG | + | chr2.1:31547578-31547597 | MS.gene62480:intron | 40.0% |
!! | CTTCAGCTTTAGAACTGCAA+CGG | + | chr2.1:31547323-31547342 | MS.gene62480:CDS | 40.0% |
!! | GGGTGAGGAGAATTTTGTTT+TGG | + | chr2.1:31547522-31547541 | MS.gene62480:intron | 40.0% |
!!! | CCTCATGATAGTTTTAGGAG+TGG | - | chr2.1:31546761-31546780 | None:intergenic | 40.0% |
AAAGACCCTCACCAAGAAGA+GGG | + | chr2.1:31548516-31548535 | MS.gene62480:CDS | 45.0% | |
AATTGACTGCACCGTACAAC+TGG | - | chr2.1:31547807-31547826 | None:intergenic | 45.0% | |
ACCTCATGGAATGGCTGAAA+TGG | + | chr2.1:31548061-31548080 | MS.gene62480:CDS | 45.0% | |
ACGGAATACTGCTTCCTCTT+CGG | + | chr2.1:31547342-31547361 | MS.gene62480:CDS | 45.0% | |
ATGTGTGTTCAAGGTGACTC+AGG | + | chr2.1:31546525-31546544 | MS.gene62480:CDS | 45.0% | |
CATGAGGGTTATGGGTGTAA+AGG | + | chr2.1:31546774-31546793 | MS.gene62480:CDS | 45.0% | |
CCTCATGGAATGGCTGAAAT+GGG | + | chr2.1:31548062-31548081 | MS.gene62480:CDS | 45.0% | |
CTTCCTCTATCCAATGATGG+TGG | - | chr2.1:31548401-31548420 | None:intergenic | 45.0% | |
GACACTTGCAGGTGAAAACA+TGG | + | chr2.1:31547998-31548017 | MS.gene62480:CDS | 45.0% | |
GAGTCACCTTGAACACACAT+GGG | - | chr2.1:31546525-31546544 | None:intergenic | 45.0% | |
GATAGACCCATGTGTGTTCA+AGG | + | chr2.1:31546516-31546535 | MS.gene62480:CDS | 45.0% | |
GATGGCTCTTGAGATGGTAA+AGG | - | chr2.1:31546807-31546826 | None:intergenic | 45.0% | |
GTTGATGCTGTTACTCAGCT+TGG | + | chr2.1:31546612-31546631 | MS.gene62480:CDS | 45.0% | |
TGAGTCACCTTGAACACACA+TGG | - | chr2.1:31546526-31546545 | None:intergenic | 45.0% | |
TGTTCTTGGACCTCATGGAA+TGG | + | chr2.1:31548052-31548071 | MS.gene62480:CDS | 45.0% | |
! | CAAGATCTTGACCTTTTCGG+AGG | + | chr2.1:31548128-31548147 | MS.gene62480:CDS | 45.0% |
! | CACCGTACAACTGGTTTCAA+AGG | - | chr2.1:31547798-31547817 | None:intergenic | 45.0% |
! | GAATCTTTTTGTTGGGGGTG+AGG | + | chr2.1:31547507-31547526 | MS.gene62480:intron | 45.0% |
! | GCTTGTCCATGTTTTGCTGA+AGG | - | chr2.1:31548178-31548197 | None:intergenic | 45.0% |
! | TCCAACGAAGACGAGGTTTT+GGG | - | chr2.1:31546569-31546588 | None:intergenic | 45.0% |
!! | AAAAAATTAAAAAAAAGATT+TGG | - | chr2.1:31547236-31547255 | None:intergenic | 5.0% |
ACCCAAAACCTCGTCTTCGT+TGG | + | chr2.1:31546565-31546584 | MS.gene62480:CDS | 50.0% | |
AGGGACAGCTTCATCATGCT+TGG | + | chr2.1:31548340-31548359 | MS.gene62480:CDS | 50.0% | |
CCATCTCAAGAGCCATCTTC+AGG | + | chr2.1:31546810-31546829 | MS.gene62480:CDS | 50.0% | |
CCCATTTCAGCCATTCCATG+AGG | - | chr2.1:31548065-31548084 | None:intergenic | 50.0% | |
CCTGAAGATGGCTCTTGAGA+TGG | - | chr2.1:31546813-31546832 | None:intergenic | 50.0% | |
GAAAGACCCTCACCAAGAAG+AGG | + | chr2.1:31548515-31548534 | MS.gene62480:CDS | 50.0% | |
GATGCTGTTACTCAGCTTGG+AGG | + | chr2.1:31546615-31546634 | MS.gene62480:CDS | 50.0% | |
GCACCACCATCATTGGATAG+AGG | + | chr2.1:31548395-31548414 | MS.gene62480:CDS | 50.0% | |
GCTTCCTCTTCGGCTATGAT+TGG | + | chr2.1:31547352-31547371 | MS.gene62480:CDS | 50.0% | |
TCAACAGTCCAACGAAGACG+AGG | - | chr2.1:31546576-31546595 | None:intergenic | 50.0% | |
TGAAGAGATGGCCCTCTTCT+TGG | - | chr2.1:31548530-31548549 | None:intergenic | 50.0% | |
TTGCTGCACCTTTGCATCGT+AGG | - | chr2.1:31546920-31546939 | None:intergenic | 50.0% | |
! | GATCTTGACCTTTTCGGAGG+CGG | + | chr2.1:31548131-31548150 | MS.gene62480:CDS | 50.0% |
! | GGTTAGGCCTTTTCTTGCCA+AGG | - | chr2.1:31548247-31548266 | None:intergenic | 50.0% |
! | GTCCAACGAAGACGAGGTTT+TGG | - | chr2.1:31546570-31546589 | None:intergenic | 50.0% |
AGATGGCCCTCTTCTTGGTG+AGG | - | chr2.1:31548525-31548544 | None:intergenic | 55.0% | |
GATGGCCCTCTTCTTGGTGA+GGG | - | chr2.1:31548524-31548543 | None:intergenic | 55.0% | |
GCTTGGAAAGCAACCCCACA+AGG | + | chr2.1:31547149-31547168 | MS.gene62480:CDS | 55.0% | |
GGCGTTGTTCTTGGACCTCA+TGG | + | chr2.1:31548047-31548066 | MS.gene62480:CDS | 55.0% | |
GCGGCCAATCATAGCCGAAG+AGG | - | chr2.1:31547359-31547378 | None:intergenic | 60.0% | |
TCATCTCTCACGCTGCGCAC+CGG | - | chr2.1:31547014-31547033 | None:intergenic | 60.0% | |
! | CTTGACCTTTTCGGAGGCGG+TGG | + | chr2.1:31548134-31548153 | MS.gene62480:CDS | 60.0% |
CACCACCACCGCCTCCGAAA+AGG | - | chr2.1:31548142-31548161 | None:intergenic | 65.0% | |
! | GACCTTTTCGGAGGCGGTGG+TGG | + | chr2.1:31548137-31548156 | MS.gene62480:CDS | 65.0% |
!! | CTTTTCGGAGGCGGTGGTGG+TGG | + | chr2.1:31548140-31548159 | MS.gene62480:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 31546468 | 31548589 | 31546468 | ID=MS.gene62480 |
chr2.1 | mRNA | 31546468 | 31548589 | 31546468 | ID=MS.gene62480.t1;Parent=MS.gene62480 |
chr2.1 | exon | 31546468 | 31546645 | 31546468 | ID=MS.gene62480.t1.exon1;Parent=MS.gene62480.t1 |
chr2.1 | CDS | 31546468 | 31546645 | 31546468 | ID=cds.MS.gene62480.t1;Parent=MS.gene62480.t1 |
chr2.1 | exon | 31546755 | 31546831 | 31546755 | ID=MS.gene62480.t1.exon2;Parent=MS.gene62480.t1 |
chr2.1 | CDS | 31546755 | 31546831 | 31546755 | ID=cds.MS.gene62480.t1;Parent=MS.gene62480.t1 |
chr2.1 | exon | 31547141 | 31547207 | 31547141 | ID=MS.gene62480.t1.exon3;Parent=MS.gene62480.t1 |
chr2.1 | CDS | 31547141 | 31547207 | 31547141 | ID=cds.MS.gene62480.t1;Parent=MS.gene62480.t1 |
chr2.1 | exon | 31547323 | 31547389 | 31547323 | ID=MS.gene62480.t1.exon4;Parent=MS.gene62480.t1 |
chr2.1 | CDS | 31547323 | 31547389 | 31547323 | ID=cds.MS.gene62480.t1;Parent=MS.gene62480.t1 |
chr2.1 | exon | 31547600 | 31547642 | 31547600 | ID=MS.gene62480.t1.exon5;Parent=MS.gene62480.t1 |
chr2.1 | CDS | 31547600 | 31547642 | 31547600 | ID=cds.MS.gene62480.t1;Parent=MS.gene62480.t1 |
chr2.1 | exon | 31547924 | 31548589 | 31547924 | ID=MS.gene62480.t1.exon6;Parent=MS.gene62480.t1 |
chr2.1 | CDS | 31547924 | 31548589 | 31547924 | ID=cds.MS.gene62480.t1;Parent=MS.gene62480.t1 |
Gene Sequence |
Protein sequence |