Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061002.t1 | XP_003609761.1 | 96.3 | 216 | 8 | 0 | 1 | 216 | 16 | 231 | 4.90E-118 | 433.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061002.t1 | Q9SWB6 | 82.4 | 216 | 38 | 0 | 1 | 216 | 14 | 229 | 6.6e-103 | 374.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061002.t1 | G7JMU3 | 96.3 | 216 | 8 | 0 | 1 | 216 | 16 | 231 | 3.6e-118 | 433.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049151 | MS.gene061002 | 0.821291 | 4.37E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene061002 | 0.84081 | 6.95E-58 | -1.69E-46 |
| MS.gene049758 | MS.gene061002 | 0.833399 | 5.46E-56 | -1.69E-46 |
| MS.gene050623 | MS.gene061002 | -0.818142 | 2.29E-52 | -1.69E-46 |
| MS.gene050642 | MS.gene061002 | 0.802773 | 4.78E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene061002 | 0.820298 | 7.39E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene061002 | 0.82459 | 7.43E-54 | -1.69E-46 |
| MS.gene05119 | MS.gene061002 | -0.805866 | 1.09E-49 | -1.69E-46 |
| MS.gene051983 | MS.gene061002 | 0.828991 | 6.61E-55 | -1.69E-46 |
| MS.gene052077 | MS.gene061002 | 0.837533 | 4.92E-57 | -1.69E-46 |
| MS.gene052426 | MS.gene061002 | 0.805966 | 1.03E-49 | -1.69E-46 |
| MS.gene053494 | MS.gene061002 | 0.843374 | 1.46E-58 | -1.69E-46 |
| MS.gene053836 | MS.gene061002 | 0.811401 | 7.13E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene061002 | 0.837358 | 5.45E-57 | -1.69E-46 |
| MS.gene054542 | MS.gene061002 | 0.810876 | 9.27E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene061002 | 0.830939 | 2.21E-55 | -1.69E-46 |
| MS.gene05510 | MS.gene061002 | 0.804827 | 1.79E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene061002 | 0.837954 | 3.83E-57 | -1.69E-46 |
| MS.gene055859 | MS.gene061002 | 0.800751 | 1.24E-48 | -1.69E-46 |
| MS.gene056979 | MS.gene061002 | 0.819832 | 9.44E-53 | -1.69E-46 |
| MS.gene058435 | MS.gene061002 | 0.801377 | 9.26E-49 | -1.69E-46 |
| MS.gene060084 | MS.gene061002 | 0.809055 | 2.29E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene061002 | 0.969365 | 5.14E-130 | -1.69E-46 |
| MS.gene060942 | MS.gene061002 | 0.943001 | 2.64E-102 | -1.69E-46 |
| MS.gene060943 | MS.gene061002 | 0.932263 | 1.11E-94 | -1.69E-46 |
| MS.gene060998 | MS.gene061002 | 0.832637 | 8.44E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene062852 | 0.815718 | 8.01E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene063426 | 0.803822 | 2.90E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene063876 | 0.804446 | 2.15E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene065164 | 0.825174 | 5.41E-54 | -1.69E-46 |
| MS.gene061002 | MS.gene065926 | 0.830485 | 2.86E-55 | -1.69E-46 |
| MS.gene061002 | MS.gene066009 | 0.801234 | 9.91E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene066206 | 0.807557 | 4.77E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene066362 | 0.802107 | 6.56E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene06652 | 0.804725 | 1.88E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene068592 | 0.816886 | 4.39E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene069559 | 0.81586 | 7.44E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene070491 | 0.827786 | 1.29E-54 | -1.69E-46 |
| MS.gene061002 | MS.gene07115 | 0.802074 | 6.67E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene071343 | 0.810731 | 9.97E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene071407 | 0.835065 | 2.08E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene071438 | -0.826762 | 2.27E-54 | -1.69E-46 |
| MS.gene061002 | MS.gene073446 | 0.800079 | 1.70E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene073966 | 0.832429 | 9.50E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene074091 | 0.807045 | 6.12E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene074393 | -0.823553 | 1.30E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene08779 | 0.841273 | 5.25E-58 | -1.69E-46 |
| MS.gene061002 | MS.gene08782 | 0.809741 | 1.63E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene08906 | 0.8347 | 2.57E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene08908 | 0.827981 | 1.16E-54 | -1.69E-46 |
| MS.gene061002 | MS.gene09310 | 0.828023 | 1.13E-54 | -1.69E-46 |
| MS.gene061002 | MS.gene20184 | 0.800755 | 1.24E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene20315 | 0.805767 | 1.14E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene20556 | 0.822695 | 2.06E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene22820 | -0.818499 | 1.90E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene23318 | 0.834622 | 2.69E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene24158 | 0.802455 | 5.57E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene24227 | 0.812599 | 3.91E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene25913 | -0.821441 | 4.03E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene26514 | 0.856711 | 2.67E-62 | -1.69E-46 |
| MS.gene061002 | MS.gene27008 | 0.830629 | 2.64E-55 | -1.69E-46 |
| MS.gene061002 | MS.gene27271 | 0.823674 | 1.22E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene28694 | 0.801309 | 9.57E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene28862 | 0.812981 | 3.22E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene29000 | 0.849336 | 3.45E-60 | -1.69E-46 |
| MS.gene061002 | MS.gene29405 | 0.831133 | 1.98E-55 | -1.69E-46 |
| MS.gene061002 | MS.gene29773 | 0.805266 | 1.45E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene29986 | 0.832428 | 9.51E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene31059 | 0.823676 | 1.22E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene31116 | 0.833922 | 4.04E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene31609 | 0.817155 | 3.82E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene31671 | 0.807802 | 4.23E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene33065 | 0.815493 | 8.99E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene33198 | 0.833959 | 3.95E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene34028 | 0.823776 | 1.15E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene34187 | 0.80195 | 7.07E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene35523 | 0.81153 | 6.68E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene36061 | 0.815214 | 1.04E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene39638 | 0.85744 | 1.63E-62 | -1.69E-46 |
| MS.gene061002 | MS.gene39805 | 0.804047 | 2.61E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene40169 | 0.800037 | 1.74E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene41037 | 0.83543 | 1.69E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene43782 | 0.815259 | 1.01E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene43822 | 0.800071 | 1.71E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene44868 | 0.800906 | 1.16E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene45170 | 0.813839 | 2.09E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene45171 | 0.831731 | 1.41E-55 | -1.69E-46 |
| MS.gene061002 | MS.gene45533 | 0.844924 | 5.59E-59 | -1.69E-46 |
| MS.gene061002 | MS.gene45727 | 0.807094 | 5.98E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene50436 | 0.800388 | 1.48E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene50741 | 0.82057 | 6.40E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene51067 | 0.838329 | 3.07E-57 | -1.69E-46 |
| MS.gene061002 | MS.gene51182 | 0.804229 | 2.39E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene52448 | 0.836073 | 1.16E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene52512 | 0.832775 | 7.80E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene53001 | 0.814642 | 1.39E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene53143 | 0.808012 | 3.82E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene54787 | 0.830454 | 2.91E-55 | -1.69E-46 |
| MS.gene061002 | MS.gene55357 | 0.800908 | 1.16E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene55505 | 0.800073 | 1.71E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene56053 | 0.804648 | 1.95E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene56290 | 0.830983 | 2.16E-55 | -1.69E-46 |
| MS.gene061002 | MS.gene56431 | 0.819269 | 1.27E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene56488 | 0.842828 | 2.04E-58 | -1.69E-46 |
| MS.gene061002 | MS.gene56870 | 0.821189 | 4.61E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene58676 | 0.816824 | 4.53E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene59149 | 0.841951 | 3.48E-58 | -1.69E-46 |
| MS.gene061002 | MS.gene60286 | 0.837337 | 5.52E-57 | -1.69E-46 |
| MS.gene061002 | MS.gene61435 | 0.809774 | 1.60E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene62480 | 0.806571 | 7.71E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene62587 | 0.816283 | 5.99E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene62623 | 0.843823 | 1.11E-58 | -1.69E-46 |
| MS.gene061002 | MS.gene63058 | 0.809865 | 1.53E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene63507 | 0.80606 | 9.88E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene63882 | 0.816652 | 4.95E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene64621 | 0.81154 | 6.65E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene64994 | 0.803244 | 3.82E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene66208 | 0.803363 | 3.61E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene66292 | 0.810508 | 1.11E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene68987 | 0.812547 | 4.01E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene69027 | 0.808307 | 3.30E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene70586 | -0.80928 | 2.05E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene70819 | 0.806787 | 6.94E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene71450 | 0.803511 | 3.37E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene72054 | 0.805045 | 1.61E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene72109 | -0.803322 | 3.68E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene74443 | 0.806454 | 8.16E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene75128 | 0.813894 | 2.03E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene75614 | 0.870623 | 1.27E-66 | -1.69E-46 |
| MS.gene061002 | MS.gene77824 | 0.800601 | 1.34E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene78202 | 0.814454 | 1.53E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene78205 | 0.829794 | 4.22E-55 | -1.69E-46 |
| MS.gene061002 | MS.gene78405 | 0.812676 | 3.76E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene79479 | 0.800718 | 1.26E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene79683 | 0.82804 | 1.12E-54 | -1.69E-46 |
| MS.gene061002 | MS.gene79842 | 0.821399 | 4.12E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene80298 | 0.817354 | 3.44E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene80919 | 0.818454 | 1.94E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene81388 | 0.825485 | 4.57E-54 | -1.69E-46 |
| MS.gene061002 | MS.gene81602 | 0.810372 | 1.19E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene81653 | 0.806147 | 9.47E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene82350 | 0.811506 | 6.77E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene82352 | 0.811448 | 6.96E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene82358 | 0.828355 | 9.42E-55 | -1.69E-46 |
| MS.gene061002 | MS.gene82939 | 0.816812 | 4.56E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene82976 | 0.802497 | 5.45E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene82978 | 0.822291 | 2.56E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene84086 | 0.805394 | 1.36E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene84326 | 0.808093 | 3.67E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene84401 | 0.835264 | 1.86E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene84404 | 0.829839 | 4.11E-55 | -1.69E-46 |
| MS.gene061002 | MS.gene84457 | 0.800944 | 1.14E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene84523 | 0.807763 | 4.31E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene85168 | 0.803551 | 3.30E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene85253 | 0.821847 | 3.25E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene87170 | 0.831271 | 1.83E-55 | -1.69E-46 |
| MS.gene061002 | MS.gene89434 | 0.800024 | 1.75E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene90704 | 0.823026 | 1.73E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene91509 | 0.805069 | 1.60E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene92548 | 0.800312 | 1.53E-48 | -1.69E-46 |
| MS.gene061002 | MS.gene93888 | 0.814481 | 1.51E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene93890 | 0.827464 | 1.54E-54 | -1.69E-46 |
| MS.gene061002 | MS.gene96220 | 0.814582 | 1.43E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene97270 | 0.838938 | 2.14E-57 | -1.69E-46 |
| MS.gene061002 | MS.gene97323 | 0.815784 | 7.74E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene98543 | 0.821164 | 4.67E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene99375 | 0.803684 | 3.10E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene99877 | 0.803087 | 4.12E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061002.t1 | MTR_4g121940 | 96.296 | 216 | 8 | 0 | 1 | 216 | 16 | 231 | 1.42e-158 | 437 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061002.t1 | AT3G16990 | 61.395 | 215 | 83 | 0 | 1 | 215 | 6 | 220 | 1.17e-99 | 288 |
Find 0 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATTATATTAATAGAGATG+TGG | + | 32439:11266-11285 | MS.gene061002:intron | 20.0% |
| !! | TCAAATAAGTCAATTTAAAC+AGG | - | 32439:11138-11157 | None:intergenic | 20.0% |
| !!! | AGTTGTTTTTCCATATAAAA+GGG | + | 32439:11203-11222 | MS.gene061002:intron | 20.0% |
| !!! | TCAATTTATTTCAATTTTGC+AGG | + | 32439:10776-10795 | MS.gene061002:intron | 20.0% |
| !!! | TTCATAATGAGTTCTAATAA+CGG | - | 32439:11056-11075 | None:intergenic | 20.0% |
| ! | ACTCATTATGAAGGTTTATT+TGG | + | 32439:11064-11083 | MS.gene061002:intron | 25.0% |
| ! | ATACATGCTCATAATTATCT+AGG | - | 32439:11632-11651 | None:intergenic | 25.0% |
| ! | CTCATTATGAAGGTTTATTT+GGG | + | 32439:11065-11084 | MS.gene061002:intron | 25.0% |
| ! | GTTATTAGAACTCATTATGA+AGG | + | 32439:11055-11074 | MS.gene061002:intron | 25.0% |
| ! | TACATGCTCATAATTATCTA+GGG | - | 32439:11631-11650 | None:intergenic | 25.0% |
| ! | TCATTATGAAGGTTTATTTG+GGG | + | 32439:11066-11085 | MS.gene061002:intron | 25.0% |
| !! | TAGTTTTTGTTAGGTTTTTG+AGG | - | 32439:10990-11009 | None:intergenic | 25.0% |
| !!! | CAGTTGTTTTTCCATATAAA+AGG | + | 32439:11202-11221 | MS.gene061002:intron | 25.0% |
| AACCTAACAAAAACTATTGC+AGG | + | 32439:10994-11013 | MS.gene061002:CDS | 30.0% | |
| AATCTCATTCCTTCAAAACA+TGG | + | 32439:10698-10717 | MS.gene061002:CDS | 30.0% | |
| ACATGCTCATAATTATCTAG+GGG | - | 32439:11630-11649 | None:intergenic | 30.0% | |
| ACTAACAAAGTCTACATTCA+GGG | + | 32439:11528-11547 | MS.gene061002:intron | 30.0% | |
| CTCTCAAGGATGAAATATTA+TGG | + | 32439:10916-10935 | MS.gene061002:CDS | 30.0% | |
| GATGATGTGGAAGTTATATT+GGG | + | 32439:10882-10901 | MS.gene061002:CDS | 30.0% | |
| TTGAACATGAAGTTCATTTC+TGG | + | 32439:11932-11951 | MS.gene061002:CDS | 30.0% | |
| TTGCAATTTATCTGCATTCA+GGG | + | 32439:11557-11576 | MS.gene061002:intron | 30.0% | |
| TTGCAATTTCTCTTCATTCA+GGG | - | 32439:11407-11426 | None:intergenic | 30.0% | |
| TTTGAAGGAATGAGATTGAA+CGG | - | 32439:10695-10714 | None:intergenic | 30.0% | |
| TTTGACCTTATCTACTGTAT+AGG | + | 32439:11153-11172 | MS.gene061002:intron | 30.0% | |
| TTTGCAATTTATCTGCATTC+AGG | + | 32439:11556-11575 | MS.gene061002:intron | 30.0% | |
| TTTGCAATTTCTCTTCATTC+AGG | - | 32439:11408-11427 | None:intergenic | 30.0% | |
| ! | TACCTGCAATAGTTTTTGTT+AGG | - | 32439:10999-11018 | None:intergenic | 30.0% |
| ! | TGATGATGTGGAAGTTATAT+TGG | + | 32439:10881-10900 | MS.gene061002:CDS | 30.0% |
| !!! | TCTAGTTTTTGCTAGTATAC+CGG | + | 32439:11108-11127 | MS.gene061002:intron | 30.0% |
| AAAAACACCACCAGAATTGA+AGG | + | 32439:11777-11796 | MS.gene061002:CDS | 35.0% | |
| AAGTTTGATGAGTCAAGATG+TGG | + | 32439:11672-11691 | MS.gene061002:CDS | 35.0% | |
| ACTAACGAAGTTTGCATTCA+GGG | + | 32439:11464-11483 | MS.gene061002:intron | 35.0% | |
| GACTAACAAAGTCTACATTC+AGG | + | 32439:11527-11546 | MS.gene061002:intron | 35.0% | |
| GTTCTCCTATACAGTAGATA+AGG | - | 32439:11161-11180 | None:intergenic | 35.0% | |
| TAAGAGAGAAGCCAACAAAT+GGG | + | 32439:10941-10960 | MS.gene061002:CDS | 35.0% | |
| TTAAGAGAGAAGCCAACAAA+TGG | + | 32439:10940-10959 | MS.gene061002:CDS | 35.0% | |
| TTTGCACACTGTATTGAAGA+AGG | + | 32439:11751-11770 | MS.gene061002:CDS | 35.0% | |
| ! | AATGAGTTCTAATAACGGCA+TGG | - | 32439:11051-11070 | None:intergenic | 35.0% |
| ! | GTTACACACACCCTTTTATA+TGG | - | 32439:11216-11235 | None:intergenic | 35.0% |
| ! | TATTTCAATTTTGCAGGCTC+AGG | + | 32439:10782-10801 | MS.gene061002:intron | 35.0% |
| ! | TGACTATCTTTTGCAGAGAT+TGG | - | 32439:11846-11865 | None:intergenic | 35.0% |
| ! | TTCTGATGATGAGCTAAAGA+AGG | + | 32439:11885-11904 | MS.gene061002:CDS | 35.0% |
| !! | AGTCATTTTAGTCCCTGAAT+GGG | + | 32439:11361-11380 | MS.gene061002:intron | 35.0% |
| !! | TAGTCATTTTAGTCCCTGAA+TGG | + | 32439:11360-11379 | MS.gene061002:intron | 35.0% |
| AAGAGAGAAGCCAACAAATG+GGG | + | 32439:10942-10961 | MS.gene061002:CDS | 40.0% | |
| AAGGAGACTTGTGAAAGATG+GGG | + | 32439:11796-11815 | MS.gene061002:CDS | 40.0% | |
| ATCAGCACACTAGCAACAAA+TGG | - | 32439:10834-10853 | None:intergenic | 40.0% | |
| CACGGATGGAGAGAATAAAA+GGG | - | 32439:10666-10685 | None:intergenic | 40.0% | |
| GAAGGAGACTTGTGAAAGAT+GGG | + | 32439:11795-11814 | MS.gene061002:CDS | 40.0% | |
| GACTAACGAAGTTTGCATTC+AGG | + | 32439:11463-11482 | MS.gene061002:intron | 40.0% | |
| GAGTGAAATACCCCATTTGT+TGG | - | 32439:10955-10974 | None:intergenic | 40.0% | |
| GATGTGGAAGTTATATTGGG+AGG | + | 32439:10885-10904 | MS.gene061002:CDS | 40.0% | |
| GGAAGTTATATTGGGAGGTA+TGG | + | 32439:10890-10909 | MS.gene061002:CDS | 40.0% | |
| GTCAATTTAAACAGGCCTAC+CGG | - | 32439:11130-11149 | None:intergenic | 40.0% | |
| TCACAAGTCTCCTTCAATTC+TGG | - | 32439:11790-11809 | None:intergenic | 40.0% | |
| TCACGGATGGAGAGAATAAA+AGG | - | 32439:10667-10686 | None:intergenic | 40.0% | |
| TGAAGGAGACTTGTGAAAGA+TGG | + | 32439:11794-11813 | MS.gene061002:CDS | 40.0% | |
| TGAGCATGTATTGTTGTGAC+AGG | + | 32439:11641-11660 | MS.gene061002:intron | 40.0% | |
| TTTATTCTCTCCATCCGTGA+TGG | + | 32439:10667-10686 | MS.gene061002:CDS | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+CGG | - | 32439:11603-11622 | None:intergenic | 40.0% |
| ! | ATCAGATGACAGTGATGATG+TGG | + | 32439:10869-10888 | MS.gene061002:CDS | 40.0% |
| ! | GTTTTTGCTAGTATACCGGT+AGG | + | 32439:11112-11131 | MS.gene061002:intron | 40.0% |
| ! | TCAAGATGTGGATTATACCG+TGG | + | 32439:11684-11703 | MS.gene061002:CDS | 40.0% |
| ! | TGCATTTTGGGCAATTGAAG+TGG | + | 32439:11714-11733 | MS.gene061002:CDS | 40.0% |
| !! | ACTTACGAGCCATGTTTTGA+AGG | - | 32439:10710-10729 | None:intergenic | 40.0% |
| !! | TGTGCTGATTAAAGCTTGCA+AGG | + | 32439:10845-10864 | MS.gene061002:CDS | 40.0% |
| ACTTTAGTCCCTGAATCGGA+AGG | - | 32439:11599-11618 | None:intergenic | 45.0% | |
| AGTCAATCAACGCTTGCAGA+AGG | + | 32439:11861-11880 | MS.gene061002:CDS | 45.0% | |
| ATTGCAAAACAGTCCCTGCA+TGG | + | 32439:11420-11439 | MS.gene061002:intron | 45.0% | |
| CAAGTCTCCTTCAATTCTGG+TGG | - | 32439:11787-11806 | None:intergenic | 45.0% | |
| CCAAAATGCAGTAAGAGCCA+CGG | - | 32439:11704-11723 | None:intergenic | 45.0% | |
| CTTTAGTCCCTGAATCGGAA+GGG | - | 32439:11598-11617 | None:intergenic | 45.0% | |
| GACGAATCATCTCCCATTCA+GGG | - | 32439:11376-11395 | None:intergenic | 45.0% | |
| GTATTGTTGTGACAGGTTGC+TGG | + | 32439:11648-11667 | MS.gene061002:intron | 45.0% | |
| GTGAAAGATGGGGCAATGAA+GGG | + | 32439:11806-11825 | MS.gene061002:CDS | 45.0% | |
| TCCCTGAAATTGACCATGCA+GGG | - | 32439:11436-11455 | None:intergenic | 45.0% | |
| TCCCTGCATGGTCAATTTCA+GGG | + | 32439:11432-11451 | MS.gene061002:intron | 45.0% | |
| TGACGAATCATCTCCCATTC+AGG | - | 32439:11377-11396 | None:intergenic | 45.0% | |
| TGTGAAAGATGGGGCAATGA+AGG | + | 32439:11805-11824 | MS.gene061002:CDS | 45.0% | |
| ! | CGTGGCTCTTACTGCATTTT+GGG | + | 32439:11702-11721 | MS.gene061002:CDS | 45.0% |
| !! | CATTTCTGGAATATGAGCCG+TGG | + | 32439:11946-11965 | MS.gene061002:CDS | 45.0% |
| !! | GGAGAGAATAAAAGGGTGTC+TGG | - | 32439:10659-10678 | None:intergenic | 45.0% |
| AGATGGGGCAATGAAGGGTT+TGG | + | 32439:11811-11830 | MS.gene061002:CDS | 50.0% | |
| GACGAATCCCTTCCGATTCA+GGG | + | 32439:11588-11607 | MS.gene061002:intron | 50.0% | |
| GTCCCTGAAATTGACCATGC+AGG | - | 32439:11437-11456 | None:intergenic | 50.0% | |
| GTCCCTGCATGGTCAATTTC+AGG | + | 32439:11431-11450 | MS.gene061002:intron | 50.0% | |
| TGACGAATCCCTTCCGATTC+AGG | + | 32439:11587-11606 | MS.gene061002:intron | 50.0% | |
| TTGCTGCGTCGTAGATAGGA+CGG | - | 32439:10636-10655 | None:intergenic | 50.0% | |
| ! | CCGTGGCTCTTACTGCATTT+TGG | + | 32439:11701-11720 | MS.gene061002:CDS | 50.0% |
| !! | GAGATTGAACGGTGCCATCA+CGG | - | 32439:10684-10703 | None:intergenic | 50.0% |
| CTGGTTGCTGCGTCGTAGAT+AGG | - | 32439:10640-10659 | None:intergenic | 55.0% | |
| ! | GGGAGGTATGGCTTCTCTCA+AGG | + | 32439:10902-10921 | MS.gene061002:CDS | 55.0% |
| !! | TTGAACGGTGCCATCACGGA+TGG | - | 32439:10680-10699 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32439 | gene | 10607 | 11978 | 10607 | ID=MS.gene061002 |
| 32439 | mRNA | 10607 | 11978 | 10607 | ID=MS.gene061002.t1;Parent=MS.gene061002 |
| 32439 | exon | 10607 | 10723 | 10607 | ID=MS.gene061002.t1.exon1;Parent=MS.gene061002.t1 |
| 32439 | CDS | 10607 | 10723 | 10607 | ID=cds.MS.gene061002.t1;Parent=MS.gene061002.t1 |
| 32439 | exon | 10798 | 11015 | 10798 | ID=MS.gene061002.t1.exon2;Parent=MS.gene061002.t1 |
| 32439 | CDS | 10798 | 11015 | 10798 | ID=cds.MS.gene061002.t1;Parent=MS.gene061002.t1 |
| 32439 | exon | 11663 | 11978 | 11663 | ID=MS.gene061002.t1.exon3;Parent=MS.gene061002.t1 |
| 32439 | CDS | 11663 | 11978 | 11663 | ID=cds.MS.gene061002.t1;Parent=MS.gene061002.t1 |
| Gene Sequence |
| Protein sequence |
